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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054952 ID=TCONS_00054952|Name=TCONS_00054952|organism=Clytia hemisphaerica|type=transcript|length=651bp
NGACTATGTAAGTTCCAGCCAAGATCGACAAAAGTTACTGTCTTAAGAGC
TCGCAGCATTAGATTTGAACAATCTAACCGAGTTTATTGATTTAATTgag
agattttgattttttaattgaaagatgTTCCTACCTGGCTTAACAATGAC
AACTTGGTATGGAGTATTTGCAAGGTGTGATTTCTCTATTGACGATGAAT
CTCCAAAGTCGACATCCTCGATGTCAACTGCGCTGAAAATCTTGTCCGAA
CCAAACAAAAATACATTGATTGGATTGAGCAATGGTATTAGAAGTATATC
TTTGTCATGACTTGATATTCCTGGTTGGTGTGTATTAAAAGTTGCCCTGA
TGTTCCTGATACCTGGCACAAATTCTTCACACTGCAGAATAAGAGGAAGA
AAAACATCATCGGATAGTGGATTAGAATTAGTGATATTGAACGACATTGA
TGATTGCGCTTTCATCTTTTCAGCGATTCCGGATTGATCCTCCTTTAGTT
TCTCTAGTAGGTAGTCTTTGATGCCCCATTTTTGAATGGCAGGCCAATGA
TTAACAGTATCTAAAAGAAGAAAGTATTTCCATCATGGTCTGTTTGAAAT
AGATGGATTGGCCGCAAAAATTTAACAAGGAATttcgaggctgaaattct
c Run BLAST on NCBI transcript from alignment at scaffold_247:293937..294917+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054952 ID=TCONS_00054952|Name=TCONS_00054952|organism=Clytia hemisphaerica|type=transcript|length=981bp|location=Sequence derived from alignment at scaffold_247:293937..294917+ (Clytia hemisphaerica)
NGACTATGTAAGTTCCAGCCAAGATCGACAAAAGTTACTGTCTTAAGAGC
TCGCAGCATTAGATTTGAACAATCTAACCGAGTTTATTGATTTAATTgag
agattttgattttttaattgaaagatgTTCCTACCTGGCTTAACAATGAC
AACTTGGTATGGAGTATTTGCAAGGTGTGATTTCTCTATTGACGATGAAT
CTCCAAAGTCGACATCCTCGATGTCAACTGCGCTGAAAATCTTGTCCGAA
CCAAACAAAAATACATTGATTGGATTGAGCAATGGTATTAGAAGTATATC
TTTGTCATGACTTGATATTCCTGGTTGGTGTGTATTAAAAGTTGCCCTGA
TGTTCCTGATACCTGAGAAAAAAGGAACGAACGTTTACTTAAGCTAATAT
TGTAAAACCTGATTATACATTAAAGGTTTAAGGGTCTCTCTTTTAGACTA
TCTCTGACAGGATGGCAAAATCACTAAATATGCAAAATTAGATCTGACCG
TATCTGGTGAGAGGGACCAATTCGGTCAAAGTTATCATTATCATTAATCA
TTAAATTAAATTATCACATCATTATTAAgactgaaattgaaaatggtcCA
CATTTTACTACAAAATTGATATTTCAAAATCTACTAATAATGTAGTCAAG
GTCATTGTCCTCTCAACAATCAGCTTTCATCAATAGACATACCTGGCACA
AATTCTTCACACTGCAGAATAAGAGGAAGAAAAACATCATCGGATAGTGG
ATTAGAATTAGTGATATTGAACGACATTGATGATTGCGCTTTCATCTTTT
CAGCGATTCCGGATTGATCCTCCTTTAGTTTCTCTAGTAGGTAGTCTTTG
ATGCCCCATTTTTGAATGGCAGGCCAATGATTAACAGTATCTAAAAGAAG
AAAGTATTTCCATCATGGTCTGTTTGAAATAGATGGATTGGCCGCAAAAA
TTTAACAAGGAATttcgaggctgaaattctc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054952-exon-scaffold_247-1491911889:293937..294294 | TCONS_00054952-exon-scaffold_247-1491911889:293937..294294 | Clytia hemisphaerica | exon |
| TCONS_00054952-exon-scaffold_247-1510915933:293937..294294 | TCONS_00054952-exon-scaffold_247-1510915933:293937..294294 | Clytia hemisphaerica | exon |
| TCONS_00054952-exon-scaffold_247-1575043694:293937..294294 | TCONS_00054952-exon-scaffold_247-1575043694:293937..294294 | Clytia hemisphaerica | exon |
| TCONS_00054952-exon-scaffold_247-1491911889:294625..294917 | TCONS_00054952-exon-scaffold_247-1491911889:294625..294917 | Clytia hemisphaerica | exon |
| TCONS_00054952-exon-scaffold_247-1510915933:294625..294917 | TCONS_00054952-exon-scaffold_247-1510915933:294625..294917 | Clytia hemisphaerica | exon |
| TCONS_00054952-exon-scaffold_247-1575043694:294625..294917 | TCONS_00054952-exon-scaffold_247-1575043694:294625..294917 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_247 | supercontig | scaffold_247:293937..294917 + |
Blast
The following BLAST results are available for this feature:
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