TCONS_00054931 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054931
Unique NameTCONS_00054931
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054931 ID=TCONS_00054931|Name=TCONS_00054931|organism=Clytia hemisphaerica|type=transcript|length=197bp
CTTTAGAGGCCCCACCATTTAGTTTTTGTGGTGTAGATTTGTTTGGCCCG
TTTTTAGTTAAGGAACGTCGCTCATTGGTTAAGCGTTGGGGNAGGATGCC
AAACGTAATCAATGGCCAATTGGGCGTGTCACCAAAGCAAATGTCGACGA
ACGTGGCCATTGTCGAAAAGTAACAGTTAAGTTAATCAATGGTGAGG
Run BLAST on NCBI

transcript from alignment at scaffold_246:267967..268163

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054931 ID=TCONS_00054931|Name=TCONS_00054931|organism=Clytia hemisphaerica|type=transcript|length=197bp|location=Sequence derived from alignment at scaffold_246:267967..268163 (Clytia hemisphaerica)
CCTCACCATTGATTAACTTAACTGTTACTTTTCGACAATGGCCACGTTCG
TCGACATTTGCTTTGGTGACACGCCCAATTGGCCATTGATTACGTTTGGC
ATCCTNCCCCAACGCTTAACCAATGAGCGACGTTCCTTAACTAAAAACGG
GCCAAACAAATCTACACCACAAAAACTAAATGGTGGGGCCTCTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034618XLOC_034618Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054931-exon-scaffold_246-1491911889:267967..268163TCONS_00054931-exon-scaffold_246-1491911889:267967..268163Clytia hemisphaericaexon
TCONS_00054931-exon-scaffold_246-1510915933:267967..268163TCONS_00054931-exon-scaffold_246-1510915933:267967..268163Clytia hemisphaericaexon
TCONS_00054931-exon-scaffold_246-1575043694:267967..268163TCONS_00054931-exon-scaffold_246-1575043694:267967..268163Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_246supercontigscaffold_246:267967..268163 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054931 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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