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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054903 ID=TCONS_00054903|Name=TCONS_00054903|organism=Clytia hemisphaerica|type=transcript|length=343bp
TACACCGCAAGTCAAacatGGCTCTTCCAACCATAGTACCAActgaatca
aaatttgaaagctGATGAAAATTCTTCCCCATTTAACAAGTGAAGAAAGT
CAATGGAGTTTTGTGACAGCAACAAATTCGGTTGACTCAACTCAAATTTG
CGATGTTGTTTTCACATTTCTTTTGCAATATGAATCTTCAGTCTCAAACA
CGTTCCCCGTGTCTATATTAGATGGTGACAGCTTATTGTATAATGTGTTC
CAAACAGTTGTTATTCCTGGTTATTTATGTCAAATGAGTGCAACTGTAAT
CTGCTTTTGAACTGGAACCTCTTATACATTCAATTGGACATTG Run BLAST on NCBI transcript from alignment at scaffold_246:27503..28481- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054903 ID=TCONS_00054903|Name=TCONS_00054903|organism=Clytia hemisphaerica|type=transcript|length=979bp|location=Sequence derived from alignment at scaffold_246:27503..28481- (Clytia hemisphaerica)
TACACCGCAAGTCAAGTAAGTACCGAATGTCTGTTAAACTATTCAGATGT
TGAAAGATGCCTGTTAAACAGATTGCCAAACTGTAAAAATCACAAATATT
TGGTCTGTATAGCTCAGTACATTGAAGGCTGTGAACAAGAATTTGTAGCC
TTCTGTAAATTCTTAAAAAAGTCATTGCTTGAGATTTAAATGGAGTTTGT
GGTAACAATTCAGTAATAAGAAATTCTAATATTTTTTTAGACATGGCTCT
TCCAACCATAGTACCAACTGAATCAAAATTTGAAAGCTGATGAAAATTCT
TCCCCATTTAACAAGCAAGTGTTATTTTTCAATGCGAAGATATTTGGGCG
GATGAACAGGTCATGAACATATCATGAACTATATCATGATATATTCCAGT
ATACTATTTTTTAGGGAAGTCATTTCAAGTTCTGAGGGTTTGAAATTTTT
GTTGAAGGACTCCCTAGGGCACTCAGGCAAGATGGGGATGTGTGGCTCAC
CAGAGTCCCTTTTATAAGTAAAGAAATACTTTGGATATTTTAAAACTTAC
TAAATTTTTGAAATCAGCTAAAAATTGTTTAGGATCCATTTTTGAACACC
AGTGACACGTCAGTGACAGTACCCCTCCCCAGGGAAATTCAAACATTAAA
CGTATACAATAATGGACAACGCTTCAAAACCTTACTGAATTTCTATGACA
TCATTATTTATCATTAATTTTTAAGGTGAAGAAAGTCAATGGAGTTTTGT
GACAGCAACAAATTCGGTTGACTCAACTCAAATTTGCGATGTTGTTTTCA
CATTTCTTTTGCAATATGAATCTTCAGTCTCAAACACGTTCCCCGTGTCT
ATATTAGATGGTGACAGCTTATTGTATAATGTGTTCCAAACAGTTGTTAT
TCCTGGTTATTTATGTCAAATGAGTGCAACTGTAATCTGCTTTTGAACTG
GAACCTCTTATACATTCAATTGGACATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054903-exon-scaffold_246-1575043694:28467..28481 | TCONS_00054903-exon-scaffold_246-1575043694:28467..28481 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1575043694:28168..28241 | TCONS_00054903-exon-scaffold_246-1575043694:28168..28241 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1575043694:27503..27756 | TCONS_00054903-exon-scaffold_246-1575043694:27503..27756 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1510915933:28467..28481 | TCONS_00054903-exon-scaffold_246-1510915933:28467..28481 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1510915933:28168..28241 | TCONS_00054903-exon-scaffold_246-1510915933:28168..28241 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1510915933:27503..27756 | TCONS_00054903-exon-scaffold_246-1510915933:27503..27756 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1491911889:28467..28481 | TCONS_00054903-exon-scaffold_246-1491911889:28467..28481 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1491911889:28168..28241 | TCONS_00054903-exon-scaffold_246-1491911889:28168..28241 | Clytia hemisphaerica | exon |
| TCONS_00054903-exon-scaffold_246-1491911889:27503..27756 | TCONS_00054903-exon-scaffold_246-1491911889:27503..27756 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_246 | supercontig | scaffold_246:27503..28481 - |
Blast
The following BLAST results are available for this feature:
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