|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054864 ID=TCONS_00054864|Name=TCONS_00054864|organism=Clytia hemisphaerica|type=transcript|length=988bp
aggGCAAGAAAGGACCTAACTCGcatataaaaaaaatgacgtaatgctGT
GCTGTGATTGGATCATAGGGTAGTGTGTACATTAAGTCCGAATATCCTAG
GGAAATGGTAGGCATTAGCAGTGTCAATAATACAGCAAGGAAATTTTTGG
TTATATAGTGTCTCATCTTTCACACACATTCACACAGCTACACGCACAGG
AGAGTATAATTCAATTTTAAGTTACTGTGAATCTGATATTCTACATTCTA
GATGGTGGTTGGTTTTtccttttcataattttttctcaCTCTTTTTCCCT
AGTCTCTCATCTTGGCCCTTATCCTTATGGGGGGTGGTTGTATGTTGTGG
TGGTGGGCTGGTGGTGCTGGTGGGGACGGGCAGCACCAAGATCAGTCTAT
CATTATTATTCCACGCCAGGTGTGGGATCTCTACAGTTTACCAGACTACT
ACACTAGAACTACACAAACAGAGGATAAAAAATCAGGCAGGGAAGTAAAA
ATACATACCACCGTGGGCGTGGGATTGGGTATAACTTACATCAGTGACCG
ACGTAaaggaggctaacatgcatagccctccaatgaaagacctggctggt
cattaaaatacaaagttaaatcaaaacaaaaatggtagagtaaagATGCA
agtggagctgcgtagttgtattttaatgaccagccagcgCCAGgtgtcat
tcatttgagggctatgcatgttagcctccactgatgcaatagaccctttt
tcaaagaggccaccctgttgaataattatgtagtttagaagaaaaacaat
gatacacccatgcataatacaccgtttaggagtcttgccatttcacggta
ctccattgcagaggcccggtaaaaatggtaggtaaaaatgcgcactttag
tactgtgaaaggttagaggaatgtaaacattgtgaatttttgtctctcct
ttaaagagaaaaatttagatatttgaacatgatatcaa Run BLAST on NCBI transcript from alignment at scaffold_245:337065..338052 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054864 ID=TCONS_00054864|Name=TCONS_00054864|organism=Clytia hemisphaerica|type=transcript|length=988bp|location=Sequence derived from alignment at scaffold_245:337065..338052 (Clytia hemisphaerica)
ttgatatcatgttcaaatatctaaatttttctctttaaaggagagacaaa
aattcacaatgtttacattcctctaacctttcacagtactaaagtgcgca
tttttacctaccatttttaccgggcctctgcaatggagtaccgtgaaatg
gcaagactcctaaacggtgtattatgcatgggtgtatcattgtttttctt
ctaaactacataattattcaacagggtggcctctttgaaaaagggtctat
tgcatcagtggaggctaacatgcatagccctcaaatgaatgacacCTGGc
gctggctggtcattaaaatacaactacgcagctccactTGCATctttact
ctaccatttttgttttgatttaactttgtattttaatgaccagccaggtc
tttcattggagggctatgcatgttagcctccttTACGTCGGTCACTGATG
TAAGTTATACCCAATCCCACGCCCACGGTGGTATGTATTTTTACTTCCCT
GCCTGATTTTTTATCCTCTGTTTGTGTAGTTCTAGTGTAGTAGTCTGGTA
AACTGTAGAGATCCCACACCTGGCGTGGAATAATAATGATAGACTGATCT
TGGTGCTGCCCGTCCCCACCAGCACCACCAGCCCACCACCACAACATACA
ACCACCCCCCATAAGGATAAGGGCCAAGATGAGAGACTAGGGAAAAAGAG
tgagaaaaaattatgaaaaggaAAAACCAACCACCATCTAGAATGTAGAA
TATCAGATTCACAGTAACTTAAAATTGAATTATACTCTCCTGTGCGTGTA
GCTGTGTGAATGTGTGTGAAAGATGAGACACTATATAACCAAAAATTTCC
TTGCTGTATTATTGACACTGCTAATGCCTACCATTTCCCTAGGATATTCG
GACTTAATGTACACACTACCCTATGATCCAATCACAGCACagcattacgt
cattttttttatatgCGAGTTAGGTCCTTTCTTGCcct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054864-exon-scaffold_245-1491911889:337065..338052 | TCONS_00054864-exon-scaffold_245-1491911889:337065..338052 | Clytia hemisphaerica | exon |
| TCONS_00054864-exon-scaffold_245-1510915933:337065..338052 | TCONS_00054864-exon-scaffold_245-1510915933:337065..338052 | Clytia hemisphaerica | exon |
| TCONS_00054864-exon-scaffold_245-1575043694:337065..338052 | TCONS_00054864-exon-scaffold_245-1575043694:337065..338052 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:337065..338052 . |
Blast
The following BLAST results are available for this feature:
|
