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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054862 ID=TCONS_00054862|Name=TCONS_00054862|organism=Clytia hemisphaerica|type=transcript|length=1849bp
GTATGAAATTGTATGTATCTATttctcaataaaaacaataaagtatacaa
aTGCAATACAATACTTAATCTATCAAATACATTTCGAAGAACTCTTAGAT
ACCTAACTAAACGATAAACGCCCCGGTTAGATAGGACCCattatttaatt
taaaaaaaattgaaaatcaaaaccaaATAGCCTGTACCCCACTTGTCAAA
ACATCTCTACTACTCAGTAGTAAATTATTGTTTTGAGGAGGAATTTATGT
ATCAACAAAGGGGAAGTTTTAATTCAGTTAAAAACCCCTACAGTAACCCA
AACTTATTAAAACCTAAAGCTAAAAATCTagtatataaataaattttttt
tattttgaagaacataatttttcgattttggaataTAAGTGTTCATTGAG
AAGTGGTACTTCATATTTCTTCAACTCATCAAATGGACGATCGGACAAAT
AAGTGAGCAGTCCAGACAGTGAATACAATCTCATCGGTCCTTTGGCAGCA
CCAATGAATTTTATTTCATCCAGAGTTTGCCCATTATATAAGACTCGAAA
AtaagcttttgaaaataattctttatCGTCTGGTAAGACATTTTCATCCG
TGTATATTTCGAAAACTATTCTTGAGGCATACGGTGGCCAAGTAGTATAT
TCTTCGTTCAAGAGCTGTAGAACAGGATGAATCATCGAATCATGGCCTGA
ATAGAACACCAGTTTCTTAGCTTTATCTGGATGTTTCAACACGTTGACGA
TGTGTGTAGCAATTTGACTTAACAATGGTAAAGCCTGAAGTTCCGCGAGC
TCTCCAGAGTGACGTAATGTGGAGTAACGATGAGCAAAACCGAAAGATTG
TTCGATTAAACTCAATGGTAGTGTATAATGAGGACCGGAAGGGATACCAA
GTCCGTGACATGCTCTTGTATAAAACGTATCAACTATTTTATTAAAAGCT
GGTAACTTTTCCATATCTGTAGATAAATAGGCGGCAATATTCTCTAAATT
TGTATGTATGTCTTTGTTAAAACGCGCCCATTTTAAACCGTGGAGTAATT
CACTCCACTTTTTATCGACATTCTGGCAATCGAGTGGAGCTCCGTTCATA
TCGAGTGATAAATGTGTATCTTTGAGATGATCAGCGTGGACATTGATAGT
CACTTTGGGTGCTTCCTTAATTAAGGTCATATAAAACATACCAATCATCA
GGGCAGCAACACTTTGTTTAGTTCTCGGTAGATCAGTTGACAGGATATGG
ACATCACTGGAAATGTCATTGACTTCTTGTAAAAAGACCGTATAACTTTC
TCTTAAATGTTCTCCTAGATACATGTGTTGAAGTATACCACGAGGAGTGA
GTTGACCACCATAACATAGTGCTCTTTCTTCGTTGATCTGTGTATGTTTA
CTGCCTTTAATCTCAAAGACGTTTTTGTTGACAACGTTCTCAAATTCACG
AAGTTTATTGTGGAAGTCGGAACCAGTGAGATTAAACTTGCATGGAATGT
GAACAGGGCTTGTGTTAGGTAATGCTCGGATATTAATAGGAGCTCGATCA
CCATGTCGAATTAAGATTTGGAGTTGGACCAGCTGTAAGCCATCAATAGT
ATCCGCTTCATCACCGTTCACTTCACGTGGTGAATTGCAATAAGAAGTAA
CCAGATTCTCAAAATCTTCTTGGGTGGAGGATTGGAAAAATGAGGTTTTG
AGCAGATAGAGGAAGAGAAAGCCAATGAAAACACAGGCTACAAGGTATCT
TCTTCGACGTACATGGTTGATCAACAATGAAAACAACATCTTTTCATTCA
ATGCCAAATTCGCTGCATTATttcatttagttttttttctttctctgaa Run BLAST on NCBI protein sequence of TCONS_00054862-protein >TCONS_00054862-protein ID=TCONS_00054862-protein|Name=TCONS_00054862-protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
MLFSLLINHVRRRRYLVACVFIGFLFLYLLKTSFFQSSTQEDFENLVTSY
CNSPREVNGDEADTIDGLQLVQLQILIRHGDRAPINIRALPNTSPVHIPC
KFNLTGSDFHNKLREFENVVNKNVFEIKGSKHTQINEERALCYGGQLTPR
GILQHMYLGEHLRESYTVFLQEVNDISSDVHILSTDLPRTKQSVAALMIG
MFYMTLIKEAPKVTINVHADHLKDTHLSLDMNGAPLDCQNVDKKWSELLH
GLKWARFNKDIHTNLENIAAYLSTDMEKLPAFNKIVDTFYTRACHGLGIP
SGPHYTLPLSLIEQSFGFAHRYSTLRHSGELAELQALPLLSQIATHIVNV
LKHPDKAKKLVFYSGHDSMIHPVLQLLNEEYTTWPPYASRIVFEIYTDEN
VLPDDKELFSKAYFRVLYNGQTLDEIKFIGAAKGPMRLYSLSGLLTYLSD
RPFDELKKYEVPLLNEHLYSKIEKLCSSK Run BLAST on NCBI transcript from alignment at scaffold_245:295438..297286 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054862 ID=TCONS_00054862|Name=TCONS_00054862|organism=Clytia hemisphaerica|type=transcript|length=1849bp|location=Sequence derived from alignment at scaffold_245:295438..297286 (Clytia hemisphaerica)
ttcagagaaagaaaaaaaactaaatgaaATAATGCAGCGAATTTGGCATT
GAATGAAAAGATGTTGTTTTCATTGTTGATCAACCATGTACGTCGAAGAA
GATACCTTGTAGCCTGTGTTTTCATTGGCTTTCTCTTCCTCTATCTGCTC
AAAACCTCATTTTTCCAATCCTCCACCCAAGAAGATTTTGAGAATCTGGT
TACTTCTTATTGCAATTCACCACGTGAAGTGAACGGTGATGAAGCGGATA
CTATTGATGGCTTACAGCTGGTCCAACTCCAAATCTTAATTCGACATGGT
GATCGAGCTCCTATTAATATCCGAGCATTACCTAACACAAGCCCTGTTCA
CATTCCATGCAAGTTTAATCTCACTGGTTCCGACTTCCACAATAAACTTC
GTGAATTTGAGAACGTTGTCAACAAAAACGTCTTTGAGATTAAAGGCAGT
AAACATACACAGATCAACGAAGAAAGAGCACTATGTTATGGTGGTCAACT
CACTCCTCGTGGTATACTTCAACACATGTATCTAGGAGAACATTTAAGAG
AAAGTTATACGGTCTTTTTACAAGAAGTCAATGACATTTCCAGTGATGTC
CATATCCTGTCAACTGATCTACCGAGAACTAAACAAAGTGTTGCTGCCCT
GATGATTGGTATGTTTTATATGACCTTAATTAAGGAAGCACCCAAAGTGA
CTATCAATGTCCACGCTGATCATCTCAAAGATACACATTTATCACTCGAT
ATGAACGGAGCTCCACTCGATTGCCAGAATGTCGATAAAAAGTGGAGTGA
ATTACTCCACGGTTTAAAATGGGCGCGTTTTAACAAAGACATACATACAA
ATTTAGAGAATATTGCCGCCTATTTATCTACAGATATGGAAAAGTTACCA
GCTTTTAATAAAATAGTTGATACGTTTTATACAAGAGCATGTCACGGACT
TGGTATCCCTTCCGGTCCTCATTATACACTACCATTGAGTTTAATCGAAC
AATCTTTCGGTTTTGCTCATCGTTACTCCACATTACGTCACTCTGGAGAG
CTCGCGGAACTTCAGGCTTTACCATTGTTAAGTCAAATTGCTACACACAT
CGTCAACGTGTTGAAACATCCAGATAAAGCTAAGAAACTGGTGTTCTATT
CAGGCCATGATTCGATGATTCATCCTGTTCTACAGCTCTTGAACGAAGAA
TATACTACTTGGCCACCGTATGCCTCAAGAATAGTTTTCGAAATATACAC
GGATGAAAATGTCTTACCAGACGataaagaattattttcaaaagcttaTT
TTCGAGTCTTATATAATGGGCAAACTCTGGATGAAATAAAATTCATTGGT
GCTGCCAAAGGACCGATGAGATTGTATTCACTGTCTGGACTGCTCACTTA
TTTGTCCGATCGTCCATTTGATGAGTTGAAGAAATATGAAGTACCACTTC
TCAATGAACACTTAtattccaaaatcgaaaaattatgttcttcaaaataa
aaaaaatttatttatatactAGATTTTTAGCTTTAGGTTTTAATAAGTTT
GGGTTACTGTAGGGGTTTTTAACTGAATTAAAACTTCCCCTTTGTTGATA
CATAAATTCCTCCTCAAAACAATAATTTACTACTGAGTAGTAGAGATGTT
TTGACAAGTGGGGTACAGGCTATttggttttgattttcaattttttttaa
attaaataatGGGTCCTATCTAACCGGGGCGTTTATCGTTTAGTTAGGTA
TCTAAGAGTTCTTCGAAATGTATTTGATAGATTAAGTATTGTATTGCAtt
tgtatactttattgtttttattgagaaATAGATACATACAATTTCATAC Coding sequence (CDS) from alignment at scaffold_245:295438..297286 >TCONS_00054862 ID=TCONS_00054862|Name=TCONS_00054862|organism=Clytia hemisphaerica|type=CDS|length=1440bp|location=Sequence derived from alignment at scaffold_245:295438..297286 (Clytia hemisphaerica)
ATGTTGTTTTCATTGTTGATCAACCATGTACGTCGAAGAAGATACCTTGT
AGCCTGTGTTTTCATTGGCTTTCTCTTCCTCTATCTGCTCAAAACCTCAT
TTTTCCAATCCTCCACCCAAGAAGATTTTGAGAATCTGGTTACTTCTTAT
TGCAATTCACCACGTGAAGTGAACGGTGATGAAGCGGATACTATTGATGG
CTTACAGCTGGTCCAACTCCAAATCTTAATTCGACATGGTGATCGAGCTC
CTATTAATATCCGAGCATTACCTAACACAAGCCCTGTTCACATTCCATGC
AAGTTTAATCTCACTGGTTCCGACTTCCACAATAAACTTCGTGAATTTGA
GAACGTTGTCAACAAAAACGTCTTTGAGATTAAAGGCAGTAAACATACAC
AGATCAACGAAGAAAGAGCACTATGTTATGGTGGTCAACTCACTCCTCGT
GGTATACTTCAACACATGTATCTAGGAGAACATTTAAGAGAAAGTTATAC
GGTCTTTTTACAAGAAGTCAATGACATTTCCAGTGATGTCCATATCCTGT
CAACTGATCTACCGAGAACTAAACAAAGTGTTGCTGCCCTGATGATTGGT
ATGTTTTATATGACCTTAATTAAGGAAGCACCCAAAGTGACTATCAATGT
CCACGCTGATCATCTCAAAGATACACATTTATCACTCGATATGAACGGAG
CTCCACTCGATTGCCAGAATGTCGATAAAAAGTGGAGTGAATTACTCCAC
GGTTTAAAATGGGCGCGTTTTAACAAAGACATACATACAAATTTAGAGAA
TATTGCCGCCTATTTATCTACAGATATGGAAAAGTTACCAGCTTTTAATA
AAATAGTTGATACGTTTTATACAAGAGCATGTCACGGACTTGGTATCCCT
TCCGGTCCTCATTATACACTACCATTGAGTTTAATCGAACAATCTTTCGG
TTTTGCTCATCGTTACTCCACATTACGTCACTCTGGAGAGCTCGCGGAAC
TTCAGGCTTTACCATTGTTAAGTCAAATTGCTACACACATCGTCAACGTG
TTGAAACATCCAGATAAAGCTAAGAAACTGGTGTTCTATTCAGGCCATGA
TTCGATGATTCATCCTGTTCTACAGCTCTTGAACGAAGAATATACTACTT
GGCCACCGTATGCCTCAAGAATAGTTTTCGAAATATACACGGATGAAAAT
GTCTTACCAGACGataaagaattattttcaaaagcttaTTTTCGAGTCTT
ATATAATGGGCAAACTCTGGATGAAATAAAATTCATTGGTGCTGCCAAAG
GACCGATGAGATTGTATTCACTGTCTGGACTGCTCACTTATTTGTCCGAT
CGTCCATTTGATGAGTTGAAGAAATATGAAGTACCACTTCTCAATGAACA
CTTAtattccaaaatcgaaaaattatgttcttcaaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054862-exon-scaffold_245-1491911889:295438..297286 | TCONS_00054862-exon-scaffold_245-1491911889:295438..297286 | Clytia hemisphaerica | exon |
| TCONS_00054862-exon-scaffold_245-1510915933:295438..297286 | TCONS_00054862-exon-scaffold_245-1510915933:295438..297286 | Clytia hemisphaerica | exon |
| TCONS_00054862-exon-scaffold_245-1575043694:295438..297286 | TCONS_00054862-exon-scaffold_245-1575043694:295438..297286 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:295438..297286 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003993 | acid phosphatase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003993 |
acid phosphatase activity |
Blast
The following BLAST results are available for this feature:
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