TCONS_00054834 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054834
Unique NameTCONS_00054834
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1625

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054834 ID=TCONS_00054834|Name=TCONS_00054834|organism=Clytia hemisphaerica|type=transcript|length=1625bp
AGAGCATTTAGTTGGGAAAGCAAGtcaaaaattcgagaaaaaataTCGGG
AGATTTTCAATCTTAGAAAATTTGTCGAAAAGGGGGGTctaaatttggca
aaatggAGTGAATACTTTGGAATTCTTTCAAAAACCTTAGAAAAAACAAC
TGGCCTACTCAAAGGCTTTCAACCCTAAGTCACCATTGAAAGAACAACTT
GAAAAACATCATGTCAACTCCAGCCAGACGAAGATTGATGAGGGATTTCA
AGAGaTTGCAAGATGACCCTCCAGCTGGTGTTAGTGGTGCACCTACTGAA
AATAACATCATGCTTTGGAATGCTGTCATTTTCGGccCTGACGAAACACC
ATTTGAAGGAGGAACATTTCGCTTGACTATGGAATTTACTGAAGAATATC
CAAATAAGCCACCTATCGTTAAATTCATCTCCAAAATGTTTCACCCCAAT
GTTTATGCTGACGGTGGAATTTGCCTGGATATTTTACAGAACAGATGGAG
TCCAACATATGACGTCTCGTCCATTCTGACGTCAATTCAATAAAAATCCA
ACACATCTCCAAAATAAGTCAAGTCGATCCATCGAAGGTTTGAATgtggc
tttgaaaggtgaattATGCACCATTATATAGAAATTTAGAGTCTTCAGAA
CATGGATCTTGCTTGGTTGTAAGGGGGTGGTGGTGGCGGTGGTGCAAACA
TAGGATTATTGTTCGATGGTTGTTGCTGAAAACCTCCTGGTTGATGAAct
aaaaggaagaagaaaaagttTTGTGCTTTGTGTGAAGGTGTCATCAATTC
AGCTCGAATGAGAGTAAATTGAGTTTTGAGTTTCATCATTATAGAAATGG
ACCTTCGTTTGAAGTATTCGAAACTTGTGTTGAGCATCTATATACCTACA
ATGGTTATTGTTTGGAAACATGGGGTTTGTATTTGTTCCATTTGGTTGTG
GTGGTGGATGTCCGAAACCAAAACCACCACCGCCCGGCTGTGCTATTTGT
TGTTGAGGATATCCGCCGTTTCCCTGTTGCGTCGTCGGCTGTTGAGGATA
TCCGCCGATAGCAATGTCTTCTGTTGTTCTATCCATGTTCGAAATTCGAT
TGCGATTTGCTTGTTGTTTAGCGTATATCCTGAACCAGATGACGAGGAAA
GTGATCGAGAAAACAGCTGGAGCGATAAAGTAATAGAGCTGCATCAATGA
AAATGTGCTCTAAGAGTCacagatttagaacgccatgagcTGCATATAAC
ATATGACGGTTTTTGTTTACTTCCTTTTTGCTGAGAAATGACAGTTTAAT
TAAAGGGATTTGAATTCTAATATGaacattgcattgcaaagaCTTCTTCC
ataattttgacgtcaaaaaagagtGAAGCCCACTTTTTAAATGTACctgt
tttttataaataaaaaatttccaaagaatcgaaaactttaaaattttctg
atttctcTGCTTATAGAAAGGGGGCAATCCTTAATGATCCGTGGCACCTT
TCGCGTGACACCCTCATTTATCGCCCTTTTCGACTTTTTTAAAAGGTAGT
TTTTTAGTATTTAGTCCATAACTTTTTTTGACAAATGACCgcttaaaatt
taagtttatcctttcTCTTTCCGAA
Run BLAST on NCBI

transcript from alignment at scaffold_245:688225..696657-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054834 ID=TCONS_00054834|Name=TCONS_00054834|organism=Clytia hemisphaerica|type=transcript|length=8433bp|location=Sequence derived from alignment at scaffold_245:688225..696657- (Clytia hemisphaerica)
AGAGCATTTAGTTGGGAAAGCAAGTCAAAAATTCGAGAAAAAATATCGGG
AGATTTTCAATCTTAGAAAATTTGTCGAAAAGGGGGGTCTAAATTTGGCA
AAATGGAGTGAATACTTTGGAATTCTTTCAAAAACCTTAGAAAAAACAAC
TGGCCTACTCAAAGGCTTTCAACCCTAAGTCACCATTGAAAGAACAACTT
GAAAAACATCATGTCAACTCCAGCCAGACGAAGATTGATGAGGGATTTCA
AGAGGTACTAAATTTTTGTTTTGTTTTCACCTCATCTCTTTTTCAAATAC
ATTTTTTCACTTAATTCAGTATTACTTATTAAAAATTACAGAAAGTAAGA
TTAAAACTTGGCTGTCTCTTCGATAAAATTATTGACCCAAGTGATACTAC
CGTCAACTGCTCTAAATAGACCTTTTTTTAAAGAGGCAACCCTGTTGAAT
AATTATGTAGTCCAGCATAAAAACAATGATACAGCCATGCATAATTACTG
TTTCATGCATATTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTTTTTTTGCTGGACTACATAATTATTCAACAGGGTGGCCTCTTTAA
AAAAAGGTCTATTGGGACGGTTGGTCGAAACATGGGACTGGGTTGATATC
TGGTCTGTATTTTCACTTACTGTTAAATCTCTTTGACAACAAATTTGTTT
TGATAACTCCACCAAGTTTATCAATCATACTTCTTTGTTACTCTTAGTGC
ACAGACACTCACGTGTGTTCCACTACAGATTTTTTTTCATATACTCGATA
TGCGAAAGAGAAATCTTGTATTTTTTAATACAGTACGCCGTTCATTAACT
CAAATCAAATGACTTTGGAAGTTCGGTGAAATGGTGACTGAATTGCCGTC
CCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGGCGGTATAATATA
TATGAATTATTTTTTGTAGACATCAGCTATTAGGCCCGTTTCAATGTTTT
GATTTTTTGCGTTTGTATGCGCATGCGCCAAAATAGTTACGGTTTTTCAG
AGGCAGAAAACACGATTTAGATAACTTACTAAAATTTCTATTCAAAATTC
CTTCTAGATCCTCAGAAAATTGACATAAACTGCATGCCTTCGGCTGATGT
TGTTGTCATTTTTGCCTCTGAAAGTCGGGCCGTTTTGCGTGTTGTAACGA
GCCAATGTAAACATGTGACGTCACATGAAACGGGCCTATAGACCTTTTGT
TAAAGAGGCAGCCATGTTGAATAATTATGTACTCCAGCATAAAAACAATG
ATACAGCCATGCATAATTTTTAAAATATGCATGATACAGTAATTACGCAT
GACTGTATCATTCTTTTTATGCTGGAGTACATAATTATTCAACATGGCTG
CCTCTTTAAAAAAAGGTCTATTGTATTGTGTACTGTGAAGTAGGGTAACT
TGCATCGGATCAGTGGAGGGAAACTTGCATAGCCATCAAATGACAGGACT
TCGGGAGTTTTCCGGAGCAGCTAAAAAAACACTATTTTTCTCTCTGGACA
GGCTAGCTCTAAAAAGTTCTAAAACAGCAACTAATAACATGAAAGCCAGA
ATATGATTCTTCAATGGGAATCGTGCACTCACAAACATCAATACTGCCAA
CAGCTCTAACTTGGGACTATCTGACAAAACATGGGTCGGCAATTCGGCCA
CCATTTCACCGAACCTCCAAAGTCATTTGATTTGAGTTAAGGAACGGCAT
ATTTGAAAATACACGATTTCTCTGAGCGCTATCGTAATTCTATCAAAGAT
ATCTTCTCCAGAACTTTCCGGAGTTCCGGTGCAGACCAATTGCCGAAAAA
AATGAAAATTCATTATAGGGCCATTCAGAAAGGTGATGGCTCTTCTTCAC
AAAAGCAAAAGACACAAATATATTTTTCGGATCCGGCATGCAGCAGAAGC
GGGAATAGGGTCAGGACCTGCAGGCAACCTACTAGTAGGGTTGGGTATGG
TATGGGTGTGGTTGTGTGTCAGATCAGCTAGGAATTGGGTTATTATCAAT
TACAGTAAGGTCAGCATTGGAGCACGAAACAAGCACTCTTTTGTGACTTT
CCCTTAATATAGTCTGGTCTGTAGTTTGTACATAATACCATGGATATTTA
GCAATTAAATCAAGACTTTTTCCCCTTGTGCAAGACCGTCGTACAATTGA
CAAAAGGCTAGATTGCAAAATCTTAACAGGGGAATAGAAAATTACTGTAG
TATATTAATGCCATCAAAGGAAGAAATGCTTGTTGAATAATATTGAATAA
TAGGAATAGGGTCTATCAATGAGTTAATACATAATAGAGCATCACTAACA
GAATTAATCATCAAAATCTTGAAGATCCGAGATCGTTTAAACAAAAAAGT
CAAGGGTTGAACTCGTGAGTCAAACCAAAAACAGATCATCAATCTAAAAA
TACGAGAGTAACACAAACACACGGCTCACTTGAAGGGAAAGATGTTCTTT
CTATGGTTAAGTTGATTAGAGATGAAAAACAAATTAAAGAAAAAGCCAAA
GAAGATTGCAAAAGTATAAAGCAGCTTGATAAAGAAGTATTTTATAAATG
CAAAGAAAAATGCATTTGTGAAAGTGGAAAATGTGATGCTATCAAATTGA
AAGAATGCTTGTCATGCCATGACACCCTAAGATTTGGATGTTCTAAATCA
GGCTGCATTAAAAATGGGAAAAAGCCAATTATGATTACAGTCGCATCCGC
AAAAAATGGTAAGGCACAAGGTTCCACAGAAGACGACATCATTGATAGCG
ATATTGGTAGGTAGTGATGCAAGTGTCCAAAGCGATGGCGATGAAGATGA
ATATGTATCAGAAGAAGAAGATGAGTTAGATGAGATTGAATTGATGAAAA
AGGCATGGGAATTTCTCAGCCTTCCAACTAAAGAGGATGATTTAATTGGA
AAATGGTTCGCAGTATGCTACAAGGGCAAATGCGGTGAAGCTCTTTTTTT
TTTTTGACAAAGATGGGCAAGTTCATAAAATTAGGATGACGTCATTAAAG
GCAAGAATAGGATCTGGTACGATCCTGGAGGGCACACCAGCCCACCTCCC
ACCTGATGATGAAGATTATGATTTGGAAGACATTATCAGTCAGGAGTAAT
ACCTTAAACAAGGCGTATACCTTGTTCAAATAAGACTTTCTATTGTTTGA
TACTTCCTATTTAGGAAGTAGTGGGAATATTTCCCAAACTAGGAAAAAGA
GCACTCTCGTCTATACCATTGGGAAGAGCATGAAAATTGAATTCCCTTGG
TGATTTTTAGAAAATTCCACAGCCAGAATTGATCACAATCTTCAATTGAC
CATGCCCCTGCCCCCCCCCTCTGTTGATGGGACTCATGTGTAATTATTGT
GAATTAGCGTAAATAGTTTTCAAAAGGGGAACGAAGAGGCGTAACCACGG
TTTGCACCGAGGAAGAAATTTTCAATTCAGTATGGCTAAAATCGCCCTCA
TTTACATTTTCTTTTCCAAAATATGGTTTAAACATCATAGGATTCATTTG
ATCAATGCCAATCTGCCCAAAATTATACCTCATAATAAACCTGTTGCTTC
TTTTCTCAACTTCAGTTGAGTTAGAATCTGAGAATGTGTGTCTGTGTGTC
TGTGTGTGTGTGTGTATGTCCCAAAACTTTGGGGCAGCCTGGAGACTTCA
AAAATTGTTCGATTTGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAAT
ATCTGGGGGTGTTTTTTTCATTTTTCAAAATTTTTGATTTTTGGGGCCTG
GGGACGAGTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGA
CTTCAAAAATTGTTTGAGTTAGTTGAAATTTTGCACACTTGTTCCTTGGG
TGAATATCTGGGGGTGTTTTTTTCATTTTTCAAAATTTTTGATTTTTGGG
GCCTGGGGACGAGTTTTCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAATATCTGG
GGGTGTTTTTTTCATTTTTCAAAAATTTTGATTTTTGGGGTCTGGGGACG
AGTTTTCGCCAAAACGAGGCTAAAACTTTAGGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTCG
CCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTT
CGATTTGGCTAAAATTTTGCACACTTGTTCCTTAGGTGAATATCTGGGGT
TGCTTTTTGCATTTTTCAAAAATTTAGATTTTTGGGGCCTAGGGACGAGT
TTTTTGCCAAAGCGAGGCTAAAGCTTTGAAGTAGCCTACAGGCCTCCAAA
ATGGTCGGATTTGGTTGAAATTTGGCACTTGTTCATTGGGTAAATATCTG
GGGGTCTACAATTGGGCCTATGAATAATTTGAAGCCACTGAAGTTGAGCC
CAGTGCGTTGCGCACGTTCGACTATCTGTTTAAGGCTTTCCTACAAATAT
ATATTTTCCTGGAATAAAGAACCTGATGTCCCTGAAGCGCAACCATGGTT
TGCGCCGACGGGAGAAATTTTCAATTTTGGACCCTCTCATAGCATTCGAC
TTTATTTTGAAGACTAGCTAGTAACTGCCAAAGACAATTGGAAGTTACAA
GAATAAATGGCAGATGACTAAAACTGTTTGCACCGATTCTTATATGTTTT
AAAATGAGATTTATAGGAGGCCCCACCATAGTTGGGGCCGACCAAGAAAA
TTTTGAAATTTAAACCCTCTAAATTGGCTAAAATGAACATAGAATTACGA
TTCGAGAAATATAATTTTCACGATCACGCTGAACTGCAAATTTCACGCCA
TCACGCCACGAAAAACCCTTCATCACGCCATCACACCAACTGCTGGGGGT
CTCCTGTATGCATGAAAGATTAAACACTGGCATTCTGCAGTACCAGGACA
TTATGCGGTACATACACCTGTAGCACGAGTCAGAAAAATGATTACGCTTA
AAATGTCGATAAAAAAGAATTTAGCTTTTTTCTATTCTTTAAAAAAGGTT
CTCCCTAAATTAAAAAAATTTTTAAAAAGATTTTAAATTTTTTTCAAACC
ATTCCAAAAGTGATGCCAGGACTACAGTAATCTGACAAATTTGCACAACC
AGAAATTATTTTGCAGGACTTACTAATCAAAATTTAGTTTTGATAAGCGA
TAATCATGATTTTATCTTTAGAACAATAGGACCCAGCTGTTTATGGAATA
ATCTAATTTGGGATTTGTTTGCTTGCATATTTTACTTAGTGACNCAGGAC
TTACTAATCAAAATTTAGTTTTGATAAGCGATAATCATGATTTTATCTTT
AGAACAATAGGACCCAGCTGTTTATGTAATAATCTTAGTTGGGATTTGTT
CGCTTGCATATTTTACTTAGTGACCAGCTCCTTTCCAGAGGAAACAGATG
GACAAATTTGCAGTTTTTTCACATTAATTTTTGCATTTTTGAACTTTTTT
TCAGATTGCAAGATGACCCTCCAGCTGGTGTTAGTGGTGCACCTACTGAA
AATAACATCATGCTTTGGAATGCTGTCATTTTCGGGTATTTTATATATAA
TTCAAAACTTGACCTCTATATATATACTATAGAAAATAATTCAAAATTCA
AAATTTAAGAAAAAGAGCTCTATAGTACAGGATATGGTTACAAATAATGA
TTTTTTCTATAATGATTATTGTGCAAAGCTAAAGGTTCATTTCCTGTATA
GTAATGAGAGGAAAATCTTTTAGTCCCATGACCTCGCAGGATATGATCAC
TCATTGATGTGTTTTGCCAAACTTTGATTGTTCAATCAAAGAAAACAAGT
AGGTACTTACCTGGCAATTTCTTAAAAATAATGACGAATCTTTTATTTTT
TAGCCCTGACGAAACACCATTTGAAGGAGGTAAGTAGTACCCACTAGGAA
TTTTTTGAACACGCCTACACCGTCTTTTTATTTGTCCTAAAAAAGCAGAC
AGCTACCAATTATCAATCAACATTTTATCAATTTTTTTTCTCTTTTCTTT
AAAGGAACATTTCGCTTGACTATGGAATTTACTGAAGAATATCCAAATAA
GCCACCTATCGTTAAATTCATCTCCAAAATGTTTCACCCCAATGGTTAGT
GTTAGTTTTTTTGTCTCTTTGAGTGCAATTCTCTGTTTTGAAATATTGTA
ATGTTACACACACATTAGAATTCATAAAATTCATAAAATCATTTCTCAAA
AAAAGTATTAACTTTAATTTCAACTTTTAAAAGCACTACACGTTTTTCTA
AAGAAGTTATTTTTGGCTGAGGGTAAGCTCCGGAGTAGAAAACGTTATTC
TTATCAGTTTGAAAAAGTTTACCCTGGAGATATTCTTAAGGCATTCTTAC
GATTTGGCTGATTTTCACCCTGGTTTTTTTTTGAAAAACCATTCTTTTAA
AAAAGCGTGTGCCTCTTTTCTCTCTTATTTCCAGTTTATGCTGACGGTGG
AATTTGCCTGGATATTTTACAGAACAGATGGAGTCCAACATATGACGTCT
CGTCCATTCTGACGTCAATTCAAGTAAGTTCCTTTCTTTGCTGATTATAG
ACAACAAAAAAGGCGAACAATTTCATGGAACTTAGTGAATTGCAATTACC
GTGTTGATCGAAGTTTTCTACAGTCACCTATCTTTATTTACTGCAGAAAA
ATTCTGTCTCAATCAAAGACATCGGTGGAAAAAAAAAAGAACTTGGAGTA
AACATAATCGCTAGGTCATTCGCTATAATGAAATCAAAAACAGTATCTGA
TTATTACTGTATTTACATCTATAACGTCCAAGTATTTTTTCTTGGCAGTA
AAAATCCAACACATCTCCAAAATAAGTCAAGTCGATCCATCGAAGGTTTG
AATGTGGCTTTGAAAGGTGAATTATGCACCATTATATAGAAATTTAGAGT
CTTCAGAACATGGATCTTGCTTGGTTGTAAGGGGGTGGTGGTGGCGGTGG
TGCAAACATAGGATTATTGTTCGATGGTTGTTGCTGAAAACCTCCTGGTT
GATGAACTAAAAGGAAGAAGAAAAAGTTTTGTGCTTTGTGTGAAGGTGTC
ATCAATTCAGCTCGAATGAGAGTAAATTGAGTTTTGAGTTTCATCATTAT
AGAAATGGACCTTCGTTTGAAGTATTCGAAACTTGTGTTGAGCATCTATA
TACCTACAATGGTTATTGTTTGGAAACATGGGGTTTGTATTTGTTCCATT
TGGTTGTGGTGGTGGATGTCCGAAACCAAAACCACCACCGCCCGGCTGTG
CTATTTGTTGTTGAGGATATCCGCCGTTTCCCTGTTGCGTCGTCGGCTGT
TGAGGATATCCGCCGATAGCAATGTCTTCTGTTGTTCTATCCATGTTCGA
AATTCGATTGCGATTTGCTTGTTGTTTAGCGTATATCCTGAACCAGATGA
CGAGGAAAGTGATCGAGAAAACAGCTGGAGCGATAAAGTAATAGAGCTGC
ATCAATGAAAATGTGCTCTAAGAGTCACAGATTTAGAACGCCATGAGCTG
CATATAACATATGACGGTTTTTGTTTACTTCCTTTTTGCTGAGAAATGAC
AGTTTAATTAAAGGGATTTGAATTCTAATATGAACATTGCATTGCAAAGA
CTTCTTCCATAATTTTGACGTCAAAAAAGAGTGAAGCCCACTTTTTAAAT
GTACCTGTTTTTTATAAATAAAAAATTTCCAAAGAATCGAAAACTTTAAA
ATTTTCTGATTTCTCTGCTTATAGAAAGGGGGCAATCCTTAATGATCCGT
GGCACCTTTCGCGTGACACCCTCATTTATCGCCCTTTTCGACTTTTTTAA
AAGGTAGTTTTTTAGTATTTAGTCCATAACTTTTTTTGACAAATGACCGC
TTAAAATTTAAGTTTATCCTTTCTCTTTCCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034541XLOC_034541Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054834-exon-scaffold_245-1575043694:696404..696657TCONS_00054834-exon-scaffold_245-1575043694:696404..696657Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1575043694:690573..690653TCONS_00054834-exon-scaffold_245-1575043694:690573..690653Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1575043694:690229..690254TCONS_00054834-exon-scaffold_245-1575043694:690229..690254Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1575043694:690014..690103TCONS_00054834-exon-scaffold_245-1575043694:690014..690103Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1575043694:689585..689673TCONS_00054834-exon-scaffold_245-1575043694:689585..689673Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1575043694:688225..689309TCONS_00054834-exon-scaffold_245-1575043694:688225..689309Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1510915933:696404..696657TCONS_00054834-exon-scaffold_245-1510915933:696404..696657Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1510915933:690573..690653TCONS_00054834-exon-scaffold_245-1510915933:690573..690653Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1510915933:690229..690254TCONS_00054834-exon-scaffold_245-1510915933:690229..690254Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1510915933:690014..690103TCONS_00054834-exon-scaffold_245-1510915933:690014..690103Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1510915933:689585..689673TCONS_00054834-exon-scaffold_245-1510915933:689585..689673Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1510915933:688225..689309TCONS_00054834-exon-scaffold_245-1510915933:688225..689309Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1491911889:696404..696657TCONS_00054834-exon-scaffold_245-1491911889:696404..696657Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1491911889:690573..690653TCONS_00054834-exon-scaffold_245-1491911889:690573..690653Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1491911889:690229..690254TCONS_00054834-exon-scaffold_245-1491911889:690229..690254Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1491911889:690014..690103TCONS_00054834-exon-scaffold_245-1491911889:690014..690103Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1491911889:689585..689673TCONS_00054834-exon-scaffold_245-1491911889:689585..689673Clytia hemisphaericaexon
TCONS_00054834-exon-scaffold_245-1491911889:688225..689309TCONS_00054834-exon-scaffold_245-1491911889:688225..689309Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:688225..696657 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.15933	7.61533	4.87962	4.48073	7.9672	6.87123	7.20878	9.52723	11.6788	10.4833	15.1194	13.1219	16.0196	16.2779	9.26637	8.04817	7.89364	11.4837	15.6329	15.5143	9.39205	9.7489	5.74898	6.77726	38.3952	24.0768	8.93387	12.0739	6.97677	6.68998
Blast
[Close]
BLAST of TCONS_00054834 vs. Swiss-Prot (Human)
Match: UBE2A (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.980e-66
Identity = 98/110 (89.09%), Postives = 106/110 (96.36%), Query Frame = 1 
Query:  211 MSTPARRRLMRDFKRLQDDPPAGVSGAPTENNIMLWNAVIFGPDETPFEGGTFRLTMEFTEEYPNKPPIVKFISKMFHPNVYADGGICLDILQNRWSPTYDVSSILTSIQ 540
            MSTPARRRLMRDFKRLQ+DPPAGVSGAP+ENNIM+WNAVIFGP+ TPFE GTF+LT+EFTEEYPNKPP V+F+SKMFHPNVYADG ICLDILQNRWSPTYDVSSILTSIQ
Sbjct:    1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQ 110
The following BLAST results are available for this feature:
BLAST of TCONS_00054834 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBE2A5.980e-6689.09Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens ... [more]
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