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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054788 ID=TCONS_00054788|Name=TCONS_00054788|organism=Clytia hemisphaerica|type=transcript|length=1639bp
aaTTTCATAATGGAATCCCTTCATAATGGCTGCTGacacatttcaaaaaa
actgaaatacACTGGTAACAAGAATCTATCTACTGCTTGTTcctgattgt
tacaagaaacaGACATGATAAAGCAATCGCAAGAACAATATAACAAAATG
ATGCTTGGTAGCAATATACGTTTATCCAAAGTTTCTATATTGTTGACAGT
TTTGTCATGTATGCTGGTTATTATTTATATGTGGGATACATATGGGGTTG
GAAGTCGATCGGGAGACACACAGACAGTTTCATTGGTCAATTTGTTGATT
GCGAGTATCGAAGCTGCAAAACGTGGTGGTGTGATGGTGAAAAGAGTGAA
AGAAGGCAAAGATTTAGGGGAGAAAAGCAAAGGGAAAACAAAAGAAGGTG
TCAATGATCCGGTAACTCAAGGAGACATGTTATCTCATGAACAAATGTAT
TTCAGCTTGTTGAAAATGTTCCCTGAAGTCAAGATTGTTTCTGAAGAGAA
ATCTAGTGAAGTTCCTGACGTTGGTGATATTAAACCTATCAATTTGGATA
ACACGGACGTCATTGAAAAATTGGGTAGTACGTTTCAATCTGATGTCAAC
ATTGATGACGTTACAGTATGGATCGACCCACTGGATGCGACTAAGGAGTA
TACTGAAGATTTACGTCAATATGTCACCACAATGGTTTGTGTGGCTCATA
AAGgaCAACCTGTGATTGGAGTCATCCATAAACCATTCGAAGATGTGACA
GTGTGGGCGTGGAAAGGTCATGGAAGATCACCAATACCTGGATTCAAAAC
ACTTTCTGATCGCAAGGACTTCAATGATCTAAATATAATTGTGTCTAGAT
CACATCAAGGAGCTGTTAAGGAGCTTGCAGCTTCGgcttttggtgaaaat
tcgaaAGTGACGGCAGCCGGAGGTGCTGGGTACAAAGCTTTAAGTGTGGC
GCAAAGGGAATCTGATGCTTATATCCATAACACGGCAATCAAGAAGTGGG
ATATCTGTGCTGGTAACGCCCTTCTCTTAACAATGGGCGGAGATATGACT
GATCTGGTGGGTAATAAGATTGATTATTCCCCGCCCACTGGCCCCGATAG
GATTGGCGTTAAATTGACTGGTGGGTTAGTAGCTACTTTTCAGAATCATG
GTATTATTGTGAAGAAAATTAAGAAAGCTATGaacgagaaaaagaaaatt
acagtAGCATGAAAGGAGCTAAATTTTATGTAggatatttgaatttttat
tagaaatttattttaaatgagTGTTCTGTTGAAATCTTTCTGTTCGTCGT
ttgtcaattttaaaagttggataaacttgaaaaattagaaaatatcaaaa
ttcttggtaaatttttactttcttttgagTTTAATTTGCTTTTTTATCGT
CTGTCTTTGTAGGTACAGTAGGAAGCTAAATAGGCCTTTTAATATGTAGT
AAGTaattttttaacgttttattTGCAgttccttttgaatttatttttaa
acctTATTTTTGTTACCATTTTATGAAAGGTTTGTTGGTGTTTATTGGTA
TTGGTTTACTGCACTGTTACAATTGTTGTGAAGATTCTATCTCTAGAGTA
CGCATATTTCAAAAGCTAATGTTCTTAACCCTTTGTGcg Run BLAST on NCBI protein sequence of TCONS_00054788-protein >TCONS_00054788-protein ID=TCONS_00054788-protein|Name=TCONS_00054788-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
MIKQSQEQYNKMMLGSNIRLSKVSILLTVLSCMLVIIYMWDTYGVGSRSG
DTQTVSLVNLLIASIEAAKRGGVMVKRVKEGKDLGEKSKGKTKEGVNDPV
TQGDMLSHEQMYFSLLKMFPEVKIVSEEKSSEVPDVGDIKPINLDNTDVI
EKLGSTFQSDVNIDDVTVWIDPLDATKEYTEDLRQYVTTMVCVAHKGQPV
IGVIHKPFEDVTVWAWKGHGRSPIPGFKTLSDRKDFNDLNIIVSRSHQGA
VKELAASAFGENSKVTAAGGAGYKALSVAQRESDAYIHNTAIKKWDICAG
NALLLTMGGDMTDLVGNKIDYSPPTGPDRIGVKLTGGLVATFQNHGIIVK
KIKKAMNEKKKITVA Run BLAST on NCBI transcript from alignment at scaffold_245:734789..741252+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054788 ID=TCONS_00054788|Name=TCONS_00054788|organism=Clytia hemisphaerica|type=transcript|length=6464bp|location=Sequence derived from alignment at scaffold_245:734789..741252+ (Clytia hemisphaerica)
aaTTTCATAATGGAATCCCTTCATAATGGCTGCTGacacatttcaaaaaa
actgaaatacACTGGTAACAAGAATCTATCTACTGCTTGTTcctgattgt
tacaagaaacaGACATGATAAAGCAATCGCAAGGTATTATAATGATATCT
CTATTTCCAATTTGTTTTATTCCatcttctttcatttttgacAGTTCACT
atctattttgtatttttttttataacaatctGACGATAGTTCCTAGTTGC
CAAGTTTAAGTTTCAGACAGTCTAAAAACTAGGAGGGTGATGCGatggaa
tataaattttttactaaaataaaacaactaagaaagttatgttttttcta
agaaagaaTGACCACTGAAATAATATACAGAATTTgtcagaatttgattg
gctacgTCTGTGAGGACCCTGCCGatgcaccggactgtccggtgtatttg
tccggtggcaaaaagtatcctattgctacaccggacgcaataagtccggt
cagtacagtcaagtatcaatatttgaggtattacgaaaatcgctactttt
tgccgtaatcgctttcgtttttaacataaggacttagcaacgggtacccc
aggcatagttacggggcattgagaaaaaatcctgacatagaatttcaaaa
agattcacgctatcatattctacattacaaaatNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacattac
aaaatacacctgttctatgttgggtttttttctcggtgttttgtaggctt
aattatcgtcatgcaaagtaaataaaaccccctggaaatctttaggttct
gataagcaaaatacttacatactattgtttacttttcaggtattcatcca
atcagaattcacgctcagaaactttcaatcaatcaaaattcaaccttgag
gcgggaaatgatccaatcagaatcccgaagctaaagacttacagccaatc
agaatctgttagcgagcggtattcatccaattggaatcgcgtaacacgaa
agcgaaagtgaaagtaaaggcggaaatatattctttttcgacgtgatttg
catatattagaacagaaagaaacgccaatttgtcaaagatttgtttaaaa
ccaccttattttttgttgagtatcgcctaaatttattgaaaaaatatgct
tttcaacattaatcttaaaatcccTTTTATTGTTGAGTATCCCCGGGGCG
CTCAacgccgaaagaaaaataagcgggcggaaccgccctcgtagtttaat
cccgggattgaaaaaacctggagaaaaccttttccgtacgtagctaagga
attttaaaacacggcatttaaagtgaaacaagatggcggagaagtagtga
ttggaggtttttgtaattagacagcatgacaaaaaggtttgttatatttt
agcataacaaagacaaactcaggaggtaaggtaaattgcgttctgactgc
ttttaactgtttttctaataaagaatatcttcaaacttgacttcactgcc
ggtgtcagtccggtgttgcatacagggaattttggacgccggacgacatt
tatgaaacaaaaaattaagtaacACCGGAATGGTCATGTCCAGTGTTTTG
ATTGtctggtggaaaaaatatccttctccgacaccgccGGACATCcaact
tccttaagtccggtgtagagattgtccggtggtaaaaaaaattctcattt
tacaccggactttcgcgtgtccgatGTTCGTTAAgtagtccggtgcgtcg
gcagggtcctcgtCTGTGTTTTCAACTGCATTGTTTGGAGCTGGGAAATT
CGAATTCATAGCCCAAACCATGCTATTCATTTTGCCATCAGGtcaggcca
atttaatttgttgttttacgggtcAAGCTCCCCCAAAATAGAGGGTCGgt
cagtgaaaaaataaaaataaaataaaagtcgaaagtagaatttcacaact
ctcgggtgcctaataaacgtacatgtgtCAAATTTCCCGTCTGTACGCac
cttatagacctttttttaaagaggcagcgaagttgaataattatgtactc
cagcataaaaacaatgacacagccatgcataattactgtatatatcatgt
atattttaaaaattatgcatggctgtatcattgtttttatgatggagtac
ataattattcaacatggctgcctctttaaaaaaaggtctattaggaCCTG
cacgtttatttaatttgacccAATATTTTCCGATTCATACTGGaaaatat
ttgttatttttctgtTCAAATAAGACGTGTAGAAAGGCCGTTAATTGCAT
TCAAACACTATTGTGGGAGATTTCGAATGTTACATGAGTAAAGTCGAACG
TTTTGCTAGAAATTCAAGCGTTTGATTTGAactctacttttgaaaaattg
atagATTTTTCCCTGTATACTGTATGTTTATTTTAATAGCCtatacgttt
atttattttagctctgatttctcgcGTGTACatttatttcagcctgtacg
tttattaattccaattttattcccccccccctgtacgtttatttggCCCA
TGAGagtataaaatctcctaaaatggcagcaaaaactactgcATCTTGAC
GAAAATGcaaaatgcaaaataaaaagacataaaaaggttgcattcatgga
taaaatgaaaaaatgaacataaaattctgacagtctgtaaagcaatgaaa
ataaatatatatataccaccaaaatcaattttatttttattacaattttt
ggttgggtccgtaaaacaactaatcaaattggtctcatttcagaaaaaaa
gtgAGACCAAGTTTGTAGTTACTGTATTAGTATTTTTACTTTGACAACTT
TGtgcaaaaaggaaaatatgtgaagttttctttttttgttggttCAATCA
AAATGTTTGGTGTGTTCACAAGCCCCTGTAACTTTGAGCAAGCATCCCAT
CGCTAAGTTAAGATGTTTGCTTGAAATAGAAAATCTATATTAACTTAGTT
TCATCCAAATAGAACTATAATATATACGCAATATGGTTTTGATGAAATAT
ATGAAGACAATAAAAAAGTCTTGACATTTCTTAAATAAAAATACATGACA
TTTACTAACCTGCCAGAACCATGCATCCTCACATCAAAATAAGGAACTTG
TTACGGTTATTTAGTGATTAAAATATAGGAATTGTTTATATATAAAAGTT
ATACTCTGATCACAATGAGGGCTTCCCTATCCAAGCTCATCTTTGATATT
AGATTGATACTTTAAAGGATTTAAAGAAATTGTATTATATATAATAAAAG
CTATTTATACTTTCATAGAACAATATAACAAAATGATGCTTGGTAGCAAT
ATACGTTTATCCAAAGTTTCTATATTGTTGACAGTTTTGTCATGTATGCT
GGTTATTATTTATATGTGGGATACATATGGGGTTGGAAGTCGATCGGGAG
ACACACAGACAGTTTCATTGGTCAATTTGTTGATTGCGAGTATCGAAGCT
GCAAAACGTGGTGGTGTGATGGTGAAAAGAGTGAAAGAAGGCAAAGATTT
AGGGGTAAGGTTTATTACTTACTTGTTTTACAGTTTTTGATGTACttatt
gaatttttctttccttgatctccaaaaatgttggttcttcttacaagaaa
agtGCTGGAAAAGTGTTATATAATGTATATGCTGTGTGTATAAAACATAT
AGATACCTAACAACTCAAACAGATACGAGAAGAAGGAAGGAATAAGAAAT
ACTAAATATAACGCTTGGAATCAGAATAGTTAGATATGAcgtttggttgt
ttttttcgatTTGTTATAATTAGACTGGATAATTTAATAAAACCTTGAAT
ATGGTCATATTGATTAGGTCTTTGAGAAACAGAAATTTACAGTGAGATAC
TTTAGGCATACAAACTTTCGGAGGCAGATACTTTcgcaattttcgcgaat
ttttcccatttttacgAAAGTATGGAAAGTATATATGTGtttaaaaattc
ttgacaaaatagaaaatttgtaaaacttgaaatgaaattaaaaagattta
tggcacttttttaGCCTGTTTTTAAACCTCAtaagtcaaaagaaaaaatt
tttaaccatttcaagaagaattttttcgtgtgaaattttttaatttttat
gtctttattcgcgaaagtttatgctcgcaaaaaagattttttcgccaaat
tcgcgaaagtagatgttttaaatttcgcgtttttcgacgtcgcgaaagtt
tctgctcgcgaaagtttgtacgcctaaagtaatgcttgatttttcttata
tttttactGCGGGAAATACAGCATTTGGCGTATTGTTTTCACGTTTTTCT
GAAACGCGAAATATGCACCCTTACTGGTTGCTCTACTGCAAAAATTAATT
ATTCCACTTTAGTTGGCCCCTTAccgttttttttcttattctaaGAAAAA
TCCAAgacttttaaatatttcaattcttaGGAGAAAAGCAAAGGGAAAAC
AAAAGAAGGTGTCAATGATCCGGTAACTCAAGGAGACATGTTATCTCATG
AACAAATGTATTTCAGCTTGTTGAAAATGTTCCCTGAAGTCAAGATTGTT
TCTGAAGAGAAATCTAGTGAAGTTCCTGACGTTGGTGATATTAAACCTAT
CAATTTGGATAACACGGACGTCATTGAAAAATTGGGTAAGCGAATTCGTC
GAGCACCTAATTTTAAACTATTGAATAGAACTACTGACCTTTACTATTGG
TTCGTCTAGAGTAAACTGTTACACTGTCTTCtctgtcttctttttttctc
aataagGGCAAATACGGTATATATCCCACATCCACGTAATGTATTTGATC
AATGAAATCACTAGAATCTTTCTTATGCGGGATAAAGTAGCCTATTTTGC
TTCCAAAGCATAATCTTTTCTAAATCAATCTATTTAACTGTTAATAAAAA
CCAATCAGATGATTtagacagaccctggaaaaccaGGGTTAAACCTTAAA
AAACAGGCCTTTAAAGAATATACATTCTTATAACTgataaatgtttcttt
ttatctttCCAGGTAGTACGTTTCAATCTGATGTCAACATTGATGACGTT
ACAGTATGGATCGACCCACTGGATGCGACTAAGGAGTATACTGAAGATTT
ACGTCAATATGTCACCACAATGGTTTGTGTGGCTCATAAAGGTTCGAAAT
TTTATTTGCCATTTCTTTACATCTGGTAGATTAATCCGGAGGTCTGGGCA
TGAATCTttttatatcaaaagaaaatctaaTAATCTTTAAATCACGATTA
GGTTTGTATCATGTCACTAAGCTTTCTGGTTTTATAATACTATTAAAACC
TTGAAATATTTTCCCTTCAGCATCACTAATTCAAAGACATTAGGAGCTAA
AActatgtttgtttatttttttatataggaCAACCTGTGATTGGAGTCAT
CCATAAACCATTCGAAGATGTGACAGTGTGGGCGTGGAAAGGTCATGGAA
GATCACCAATACCTGGATTCAAAACACTTTCTGATCGCAAGGACTTCAAT
GATCTAAATATAATTGTGTCTAGATCACATCAAGGAGCTGTTAAGGAGCT
TGCAGCTTCGgcttttggtgaaaattcgaaAGTGACGGCAGCCGGAGGTG
CTGGGTACAAAGCTTTAAGTGTGGCGCAAAGGGAATCTGATGCTTATATC
CATAACACGGCAATCAAGAAGTGGGATATCTGTGCTGGTAACGCCCTTCT
CTTAACAATGGGCGGAGATATGACTGATCTGGTGGGTAATAAGATTGATT
ATTCCCCGCCCACTGGCCCCGATAGGATTGGCGTTAAATTGACTGGTGGG
TTAGTAGCTACTTTTCAGAATCATGGTATTATTGTGAAGAAAATTAAGAA
AGCTATGaacgagaaaaagaaaattacagtAGCATGAAAGGAGCTAAATT
TTATGTAggatatttgaatttttattagaaatttattttaaatgagTGTT
CTGTTGAAATCTTTCTGTTCGTCGTttgtcaattttaaaagttggataaa
cttgaaaaattagaaaatatcaaaattcttggtaaatttttactttcttt
tgagTTTAATTTGCTTTTTTATCGTCTGTCTTTGTAGGTACAGTAGGAAG
CTAAATAGGCCTTTTAATATGTAGTAAGTaattttttaacgttttattTG
CAgttccttttgaatttatttttaaacctTATTTTTGTTACCATTTTATG
AAAGGTTTGTTGGTGTTTATTGGTATTGGTTTACTGCACTGTTACAATTG
TTGTGAAGATTCTATCTCTAGAGTACGCATATTTCAAAAGCTAATGTTCT
TAACCCTTTGTGcg Coding sequence (CDS) from alignment at scaffold_245:734789..741252+ >TCONS_00054788 ID=TCONS_00054788|Name=TCONS_00054788|organism=Clytia hemisphaerica|type=CDS|length=5490bp|location=Sequence derived from alignment at scaffold_245:734789..741252+ (Clytia hemisphaerica)
ATGATAAAGCAATCGCAAGAACAATATAACAAAATGATGCTTGGTAGCAA
TATACGTTTATCCAAAGTTTCTATATTGTTGACAGTTTTGTCATGTATGC
TGGTTATTATTTATATGTGGGATACATATGGGGTTGGAAGTCGATCGGGA
GACACACAGACAGTTTCATTGGTCAATTTGTTGATTGCGAGTATCGAAGC
TGCAAAACGTGGTGGTGTGATGGTGAAAAGAGTGAAAGAAGGCAAAGATT
TAGGGGAGAAAAGCAAAGGGAAAACAAAAGAAGGTGTCAATGATCCGGTA
ACTCAAGGAGACATGTTATCTCATGAACAAATGTATTTCAGCTTGTTGAA
AATGTTCCCTGAAGTCAAGATTGTTTCTGAAGAGAAATCTAGTGAAGTTC
CTGACGTTGGTGATATTAAACCTATCAATTTGGATAACACGGACGTCATT
GAAAAATTGGGTAGTACGTTTCAATCTGATGTCAACATTGATGACGTTAC
AGTATGGATCGACCCACTGGATGCGACTAAGGAGTATACTGAAGATTTAC
GTCAATATGTCACCACAATGGTTTGTGTGGCTCATAAAGgaCAACCTGTG
ATTGGAGTCATCCATAAACCATTCGAAGATGTGACAGTGTGGGCGTGGAA
AGGTCATGGAAGATCACCAATACCTGGATTCAAAACACTTTCTGATCGCA
AGGACTTCAATGATCTAAATATAATTGTGTCTAGATCACATCAAGGAGCT
GTTAAGGAGCTTGCAGCTTCGgcttttggtgaaaattcgaaAGTGACGGC
AGCCGGAGGTGCTGGGTACAAAGCTTTAAGTGTGGCGCAAAGGGAATCTG
ATGCTTATATCCATAACACGGCAATCAAGAAGTGGGATATCTGTGCTGGT
AACGCCCTTCTCTTAACAATGGGCGGAGATATGACTGATCTGGTGGGTAA
TAAGATTGATTATTCCCCGCCCACTGGCCCCGATAGGATTGGCGTTAAAT
TGACTGGTGGGTTAGTAGCTACTTTTCAGAATCATGGTATTATTGTGAAG
AAAATTAAGAAAGCTATGaacgagaaaaagaaaattacagtAGCATGAAT
GATAAAGCAATCGCAAGAACAATATAACAAAATGATGCTTGGTAGCAATA
TACGTTTATCCAAAGTTTCTATATTGTTGACAGTTTTGTCATGTATGCTG
GTTATTATTTATATGTGGGATACATATGGGGTTGGAAGTCGATCGGGAGA
CACACAGACAGTTTCATTGGTCAATTTGTTGATTGCGAGTATCGAAGCTG
CAAAACGTGGTGGTGTGATGGTGAAAAGAGTGAAAGAAGGCAAAGATTTA
GGGGAGAAAAGCAAAGGGAAAACAAAAGAAGGTGTCAATGATCCGGTAAC
TCAAGGAGACATGTTATCTCATGAACAAATGTATTTCAGCTTGTTGAAAA
TGTTCCCTGAAGTCAAGATTGTTTCTGAAGAGAAATCTAGTGAAGTTCCT
GACGTTGGTGATATTAAACCTATCAATTTGGATAACACGGACGTCATTGA
AAAATTGGGTAGTACGTTTCAATCTGATGTCAACATTGATGACGTTACAG
TATGGATCGACCCACTGGATGCGACTAAGGAGTATACTGAAGATTTACGT
CAATATGTCACCACAATGGTTTGTGTGGCTCATAAAGgaCAACCTGTGAT
TGGAGTCATCCATAAACCATTCGAAGATGTGACAGTGTGGGCGTGGAAAG
GTCATGGAAGATCACCAATACCTGGATTCAAAACACTTTCTGATCGCAAG
GACTTCAATGATCTAAATATAATTGTGTCTAGATCACATCAAGGAGCTGT
TAAGGAGCTTGCAGCTTCGgcttttggtgaaaattcgaaAGTGACGGCAG
CCGGAGGTGCTGGGTACAAAGCTTTAAGTGTGGCGCAAAGGGAATCTGAT
GCTTATATCCATAACACGGCAATCAAGAAGTGGGATATCTGTGCTGGTAA
CGCCCTTCTCTTAACAATGGGCGGAGATATGACTGATCTGGTGGGTAATA
AGATTGATTATTCCCCGCCCACTGGCCCCGATAGGATTGGCGTTAAATTG
ACTGGTGGGTTAGTAGCTACTTTTCAGAATCATGGTATTATTGTGAAGAA
AATTAAGAAAGCTATGaacgagaaaaagaaaattacagtAGCATGAATGA
TAAAGCAATCGCAAGAACAATATAACAAAATGATGCTTGGTAGCAATATA
CGTTTATCCAAAGTTTCTATATTGTTGACAGTTTTGTCATGTATGCTGGT
TATTATTTATATGTGGGATACATATGGGGTTGGAAGTCGATCGGGAGACA
CACAGACAGTTTCATTGGTCAATTTGTTGATTGCGAGTATCGAAGCTGCA
AAACGTGGTGGTGTGATGGTGAAAAGAGTGAAAGAAGGCAAAGATTTAGG
GGAGAAAAGCAAAGGGAAAACAAAAGAAGGTGTCAATGATCCGGTAACTC
AAGGAGACATGTTATCTCATGAACAAATGTATTTCAGCTTGTTGAAAATG
TTCCCTGAAGTCAAGATTGTTTCTGAAGAGAAATCTAGTGAAGTTCCTGA
CGTTGGTGATATTAAACCTATCAATTTGGATAACACGGACGTCATTGAAA
AATTGGGTAGTACGTTTCAATCTGATGTCAACATTGATGACGTTACAGTA
TGGATCGACCCACTGGATGCGACTAAGGAGTATACTGAAGATTTACGTCA
ATATGTCACCACAATGGTTTGTGTGGCTCATAAAGgaCAACCTGTGATTG
GAGTCATCCATAAACCATTCGAAGATGTGACAGTGTGGGCGTGGAAAGGT
CATGGAAGATCACCAATACCTGGATTCAAAACACTTTCTGATCGCAAGGA
CTTCAATGATCTAAATATAATTGTGTCTAGATCACATCAAGGAGCTGTTA
AGGAGCTTGCAGCTTCGgcttttggtgaaaattcgaaAGTGACGGCAGCC
GGAGGTGCTGGGTACAAAGCTTTAAGTGTGGCGCAAAGGGAATCTGATGC
TTATATCCATAACACGGCAATCAAGAAGTGGGATATCTGTGCTGGTAACG
CCCTTCTCTTAACAATGGGCGGAGATATGACTGATCTGGTGGGTAATAAG
ATTGATTATTCCCCGCCCACTGGCCCCGATAGGATTGGCGTTAAATTGAC
TGGTGGGTTAGTAGCTACTTTTCAGAATCATGGTATTATTGTGAAGAAAA
TTAAGAAAGCTATGaacgagaaaaagaaaattacagtAGCATGAATGATA
AAGCAATCGCAAGAACAATATAACAAAATGATGCTTGGTAGCAATATACG
TTTATCCAAAGTTTCTATATTGTTGACAGTTTTGTCATGTATGCTGGTTA
TTATTTATATGTGGGATACATATGGGGTTGGAAGTCGATCGGGAGACACA
CAGACAGTTTCATTGGTCAATTTGTTGATTGCGAGTATCGAAGCTGCAAA
ACGTGGTGGTGTGATGGTGAAAAGAGTGAAAGAAGGCAAAGATTTAGGGG
AGAAAAGCAAAGGGAAAACAAAAGAAGGTGTCAATGATCCGGTAACTCAA
GGAGACATGTTATCTCATGAACAAATGTATTTCAGCTTGTTGAAAATGTT
CCCTGAAGTCAAGATTGTTTCTGAAGAGAAATCTAGTGAAGTTCCTGACG
TTGGTGATATTAAACCTATCAATTTGGATAACACGGACGTCATTGAAAAA
TTGGGTAGTACGTTTCAATCTGATGTCAACATTGATGACGTTACAGTATG
GATCGACCCACTGGATGCGACTAAGGAGTATACTGAAGATTTACGTCAAT
ATGTCACCACAATGGTTTGTGTGGCTCATAAAGgaCAACCTGTGATTGGA
GTCATCCATAAACCATTCGAAGATGTGACAGTGTGGGCGTGGAAAGGTCA
TGGAAGATCACCAATACCTGGATTCAAAACACTTTCTGATCGCAAGGACT
TCAATGATCTAAATATAATTGTGTCTAGATCACATCAAGGAGCTGTTAAG
GAGCTTGCAGCTTCGgcttttggtgaaaattcgaaAGTGACGGCAGCCGG
AGGTGCTGGGTACAAAGCTTTAAGTGTGGCGCAAAGGGAATCTGATGCTT
ATATCCATAACACGGCAATCAAGAAGTGGGATATCTGTGCTGGTAACGCC
CTTCTCTTAACAATGGGCGGAGATATGACTGATCTGGTGGGTAATAAGAT
TGATTATTCCCCGCCCACTGGCCCCGATAGGATTGGCGTTAAATTGACTG
GTGGGTTAGTAGCTACTTTTCAGAATCATGGTATTATTGTGAAGAAAATT
AAGAAAGCTATGaacgagaaaaagaaaattacagtAGCATGAATGATAAA
GCAATCGCAAGAACAATATAACAAAATGATGCTTGGTAGCAATATACGTT
TATCCAAAGTTTCTATATTGTTGACAGTTTTGTCATGTATGCTGGTTATT
ATTTATATGTGGGATACATATGGGGTTGGAAGTCGATCGGGAGACACACA
GACAGTTTCATTGGTCAATTTGTTGATTGCGAGTATCGAAGCTGCAAAAC
GTGGTGGTGTGATGGTGAAAAGAGTGAAAGAAGGCAAAGATTTAGGGGAG
AAAAGCAAAGGGAAAACAAAAGAAGGTGTCAATGATCCGGTAACTCAAGG
AGACATGTTATCTCATGAACAAATGTATTTCAGCTTGTTGAAAATGTTCC
CTGAAGTCAAGATTGTTTCTGAAGAGAAATCTAGTGAAGTTCCTGACGTT
GGTGATATTAAACCTATCAATTTGGATAACACGGACGTCATTGAAAAATT
GGGTAGTACGTTTCAATCTGATGTCAACATTGATGACGTTACAGTATGGA
TCGACCCACTGGATGCGACTAAGGAGTATACTGAAGATTTACGTCAATAT
GTCACCACAATGGTTTGTGTGGCTCATAAAGgaCAACCTGTGATTGGAGT
CATCCATAAACCATTCGAAGATGTGACAGTGTGGGCGTGGAAAGGTCATG
GAAGATCACCAATACCTGGATTCAAAACACTTTCTGATCGCAAGGACTTC
AATGATCTAAATATAATTGTGTCTAGATCACATCAAGGAGCTGTTAAGGA
GCTTGCAGCTTCGgcttttggtgaaaattcgaaAGTGACGGCAGCCGGAG
GTGCTGGGTACAAAGCTTTAAGTGTGGCGCAAAGGGAATCTGATGCTTAT
ATCCATAACACGGCAATCAAGAAGTGGGATATCTGTGCTGGTAACGCCCT
TCTCTTAACAATGGGCGGAGATATGACTGATCTGGTGGGTAATAAGATTG
ATTATTCCCCGCCCACTGGCCCCGATAGGATTGGCGTTAAATTGACTGGT
GGGTTAGTAGCTACTTTTCAGAATCATGGTATTATTGTGAAGAAAATTAA
GAAAGCTATGaacgagaaaaagaaaattacagtAGCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054788-exon-scaffold_245-1491911889:734789..734921 | TCONS_00054788-exon-scaffold_245-1491911889:734789..734921 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1510915933:734789..734921 | TCONS_00054788-exon-scaffold_245-1510915933:734789..734921 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1575043694:734789..734921 | TCONS_00054788-exon-scaffold_245-1575043694:734789..734921 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1491911889:738207..738442 | TCONS_00054788-exon-scaffold_245-1491911889:738207..738442 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1510915933:738207..738442 | TCONS_00054788-exon-scaffold_245-1510915933:738207..738442 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1575043694:738207..738442 | TCONS_00054788-exon-scaffold_245-1575043694:738207..738442 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1491911889:739369..739573 | TCONS_00054788-exon-scaffold_245-1491911889:739369..739573 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1510915933:739369..739573 | TCONS_00054788-exon-scaffold_245-1510915933:739369..739573 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1575043694:739369..739573 | TCONS_00054788-exon-scaffold_245-1575043694:739369..739573 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1491911889:739951..740079 | TCONS_00054788-exon-scaffold_245-1491911889:739951..740079 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1510915933:739951..740079 | TCONS_00054788-exon-scaffold_245-1510915933:739951..740079 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1575043694:739951..740079 | TCONS_00054788-exon-scaffold_245-1575043694:739951..740079 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1491911889:740317..741252 | TCONS_00054788-exon-scaffold_245-1491911889:740317..741252 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1510915933:740317..741252 | TCONS_00054788-exon-scaffold_245-1510915933:740317..741252 | Clytia hemisphaerica | exon |
| TCONS_00054788-exon-scaffold_245-1575043694:740317..741252 | TCONS_00054788-exon-scaffold_245-1575043694:740317..741252 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:734789..741252 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000760 | Inositol_monophosphatase-like |
| IPR020550 | Inositol_monophosphatase_CS |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046854 | phosphatidylinositol phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0046854 |
phosphatidylinositol phosphorylation |
Blast
BLAST of TCONS_00054788 vs. Swiss-Prot (Human)
Match: IMPA3 (Inositol monophosphatase 3 OS=Homo sapiens GN=IMPAD1 PE=1 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.392e-71 Identity = 143/304 (47.04%), Postives = 191/304 (62.83%), Query Frame = 1
Query: 274 TVSLVNLLIASIEAAKRGGVMVKRVKEGKDLGEKSKGKTKEGVNDPVTQGDMLSHEQMYFSLLKMFPXXXXXXXXXXXXXPDVGDIKPINLDN---TDVIEKLGSTFQSDVNIDDVTVWIDPLDATKEYTEDLRQYVTTMVCVAHKGQPVIGVIHKPFEDVTVWAWKGHGRSPIPGFKTLSDRKDFNDL--NIIVSRSHQGAVKELAASAFGENSKVTAAGGAGYKALSV------AQRESDAYIHNTAIKKWDICAGNALLLTMGGDMTDLVGNKIDYSPPTGPDRIGVKLTGGLVATFQ-NH 1149
TV L +L S+ AA RGG V+RV+E L EKSKGKT+EG D +T GD+LS+ +M++ L FP V+I +EE D D + I D+ D+++++ T +V + VTVWIDPLDAT+EYTEDLR+YVTTMVCVA G+P++GVIHKPF + T WA + G + R +N+ I+VSRSH G VK++A FG + + AGGAGYK L++ +Q ++D YIH T IKKWDICAGNA+L +GG MT L G +I Y TG D I GGL+A+ + NH
Sbjct: 60 TVDLREMLAVSVLAAVRGGDEVRRVRESNVLHEKSKGKTREGAEDKMTSGDVLSNRKMFYLLKTAFPSVQINTEEHV----DAADQEVILWDHKIPEDILKEV--TTPKEVPAESVTVWIDPLDATQEYTEDLRKYVTTMVCVAVNGKPMLGVIHKPFSEYTAWAM-------VDGGSNVKARSSYNEKTPRIVVSRSHSGMVKQVALQTFGNQTTIIPAGGAGYKVLALLDVPDKSQEKADLYIHVTYIKKWDICAGNAILKALGGHMTTLSGEEISY---TGSDGI----EGGLLASIRMNH 343
The following BLAST results are available for this feature:
|
