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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054732 ID=TCONS_00054732|Name=TCONS_00054732|organism=Clytia hemisphaerica|type=transcript|length=1534bp
AAATAATACATACTGGACCCAATACTGCATGGATATTATCGTGTATGCTT
TTGAGCATTTTGTCCTTAGCAAGGACATCTATTTTGGAATGCTCTTGTAA
TAGTTCCTTTATTTGAGTGTCCAAAAATTGGAACATTCTTGATGTTAATC
GGAGTAGGTGACTCGTCCAAGATTTTCTCTTTAATCTGGCGATTATAACG
TGGTTCGAAAGGTACTTATTCAGATAAACAGCCTGGGCTTCTCTCAACTC
CAGGTCctaccttcttcatcttcgtTGAGCTCGTATCTCACTAATTTTGG
AGCTGGTGGCAGGTCATCCAAAGGCAAAGCAGATCTCTTCCAAGTAGAAG
CAGTAGTAATGTTAAGAGGGGTCGAAGTTTGCTGATTCGAAGTGGCTACA
GAAGTAGAGGCATTCTCTCCATCAGTATTTGCTGAGTCAGTAGATTCATG
AGATGCTTTTGAGGTTTTACGAAAAATACgagaaaatatattgaaatcCC
CAATCAAGTAATGATTGAAATTAATAACACATACTGGTTAGCGTCATCAA
TCGTGTCGATTTCCCCGTTCTGGTCGCGGGCAGATCCATGTGGCACCACG
ACAAACTCCTCAGCAGACAGGCCACGATCGGCATCTGCAACAAAGCCGTA
CTGAAAACGTGTTAGTTAAAATGGTactgtttaaaaaaatgttctataTC
CTAAAAGCAATCTAACAAATACAATATACTATGGTATGGTATATAGTACT
GAATgttgaaacaaaaaataatatctcTTCAGTCTAAATCACAGAAATTT
AATCCTCTTGTTTACACGGGGAATGAcgatatttttatgaaaaatacaaa
ataggtGATATAAAATCGCCTAAACAAAAGTATACAACACacaatttttt
aataagcaactcaaattttagtgtcagcCTTCGATGCTCAATTTCTAAGA
AATTTGCCTagaccacccctgatattataccatatttatgctaaCACGGT
CAAGGGCTACTTAAATCTTTTACTTTAGGAGATGTTGATTACAGTGCTCG
GGCCTTAACAACCTGGTTGCTTAGAAAAAGGTGTGTGTTGATCTCAACGA
AggtatttcaaaacaatttggTCTCGAAGAAGCGAAAATGGTCAAATAGG
CCCTTAAATTAATCCAATCTGCAGACAACATTGTTTCCTCAACTCAGAAA
AATACCTTTCCAGCATAGTTgtattcaaaaagaaattttttgcctgaaaa
ttaattttccagCACCCGTAAGTAATATTTGTATACTCCCTCCTGAATTT
CGGAGAGTCACAGTTTTTCCAGCAGACAAGCGTTAAATTTATTGCTAAGT
TACAACAAGTTATTAATCCCGTCATAGATACTAACTGGAAGTTGTATTAG
CTGGTACATCATAATTAACAAGAGCTTGTGGAAAATATTATCCAGATTCT
GCCTAGAATTTGCTGGTGTTTTTAGTGGCCAGCATTTgctggtgtttttg
aaaaagtgtGTGGCCAGCATTTGCTGGTGATTTC Run BLAST on NCBI transcript from alignment at scaffold_244:13752..15285 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054732 ID=TCONS_00054732|Name=TCONS_00054732|organism=Clytia hemisphaerica|type=transcript|length=1534bp|location=Sequence derived from alignment at scaffold_244:13752..15285 (Clytia hemisphaerica)
GAAATCACCAGCAAATGCTGGCCACacactttttcaaaaacaccagcAAA
TGCTGGCCACTAAAAACACCAGCAAATTCTAGGCAGAATCTGGATAATAT
TTTCCACAAGCTCTTGTTAATTATGATGTACCAGCTAATACAACTTCCAG
TTAGTATCTATGACGGGATTAATAACTTGTTGTAACTTAGCAATAAATTT
AACGCTTGTCTGCTGGAAAAACTGTGACTCTCCGAAATTCAGGAGGGAGT
ATACAAATATTACTTACGGGTGctggaaaattaattttcaggcaaaaaat
ttctttttgaatacAACTATGCTGGAAAGGTATTTTTCTGAGTTGAGGAA
ACAATGTTGTCTGCAGATTGGATTAATTTAAGGGCCTATTTGACCATTTT
CGCTTCTTCGAGAccaaattgttttgaaataccTTCGTTGAGATCAACAC
ACACCTTTTTCTAAGCAACCAGGTTGTTAAGGCCCGAGCACTGTAATCAA
CATCTCCTAAAGTAAAAGATTTAAGTAGCCCTTGACCGTGttagcataaa
tatggtataatatcaggggtggtctAGGCAAATTTCTTAGAAATTGAGCA
TCGAAGgctgacactaaaatttgagttgcttattaaaaaattgtGTGTTG
TATACTTTTGTTTAGGCGATTTTATATCacctattttgtatttttcataa
aaatatcgTCATTCCCCGTGTAAACAAGAGGATTAAATTTCTGTGATTTA
GACTGAAgagatattattttttgtttcaacATTCAGTACTATATACCATA
CCATAGTATATTGTATTTGTTAGATTGCTTTTAGGAtatagaacattttt
ttaaacagtACCATTTTAACTAACACGTTTTCAGTACGGCTTTGTTGCAG
ATGCCGATCGTGGCCTGTCTGCTGAGGAGTTTGTCGTGGTGCCACATGGA
TCTGCCCGCGACCAGAACGGGGAAATCGACACGATTGATGACGCTAACCA
GTATGTGTTATTAATTTCAATCATTACTTGATTGGGgatttcaatatatt
ttctcGTATTTTTCGTAAAACCTCAAAAGCATCTCATGAATCTACTGACT
CAGCAAATACTGATGGAGAGAATGCCTCTACTTCTGTAGCCACTTCGAAT
CAGCAAACTTCGACCCCTCTTAACATTACTACTGCTTCTACTTGGAAGAG
ATCTGCTTTGCCTTTGGATGACCTGCCACCAGCTCCAAAATTAGTGAGAT
ACGAGCTCAacgaagatgaagaaggtagGACCTGGAGTTGAGAGAAGCCC
AGGCTGTTTATCTGAATAAGTACCTTTCGAACCACGTTATAATCGCCAGA
TTAAAGAGAAAATCTTGGACGAGTCACCTACTCCGATTAACATCAAGAAT
GTTCCAATTTTTGGACACTCAAATAAAGGAACTATTACAAGAGCATTCCA
AAATAGATGTCCTTGCTAAGGACAAAATGCTCAAAAGCATACACGATAAT
ATCCATGCAGTATTGGGTCCAGTATGTATTATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054732-exon-scaffold_244-1491911889:13752..15285 | TCONS_00054732-exon-scaffold_244-1491911889:13752..15285 | Clytia hemisphaerica | exon |
| TCONS_00054732-exon-scaffold_244-1510915933:13752..15285 | TCONS_00054732-exon-scaffold_244-1510915933:13752..15285 | Clytia hemisphaerica | exon |
| TCONS_00054732-exon-scaffold_244-1575043694:13752..15285 | TCONS_00054732-exon-scaffold_244-1575043694:13752..15285 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_244 | supercontig | scaffold_244:13752..15285 . |
Blast
The following BLAST results are available for this feature:
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