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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054695 ID=TCONS_00054695|Name=TCONS_00054695|organism=Clytia hemisphaerica|type=transcript|length=912bp
ttcaaataaaaaattataattaaacaTCATCTGTTCTCATTATAGTCATT
TCTCCCAACATTTTGCTAAATAGAGAAACCTTCGATTTGTAACATCTCAA
TCTCCAAGAGGAGAGGAGTTTGAGCCAATAAAAGTAATTTTCCACTAAAA
AAAGGCAAATTACGGAGACAtgtataaaaaggaaaaaattctttctttaa
aactttatttataAGTAGATAAGTATTGGACTCGCGGTGATGGCGATCTT
GATATGTTATTAAAGTCAGCGATTATTTATTATGAAACTCATATTTTAAG
AAATCTTTGGGCCTTTTTATTGATTATCTTTCCAAGATTCGAActctcat
ttttggacctaccatggagaggtcctttaaattaactgatgctcgctcgt
tcgttcgtccattcgtccgttcgttcgttcgtctgttaccagcttttctc
tggattggctcattagttttttctgattctcAACTTCAATTGAGGTTTAG
AAACATTAGTCAAAGtgacgaagaaagcgagtttaTCTCGGAGTTGATAA
ACAGAGGTTCAGAGACGTTCCTTAAAGTGACGAAAAAAGTGAGTTGATAA
ACTGAGGTTAAGAGACGTTCgttaaagttacgaagaaagcaagtggATAA
ACTTAGGTTTAAAGACGTTATttaaagttacgaagaaaacgAGTGGATAA
ACTGAGGTTTAGAGACGTTCCTTAAAGTGACGAAAAAAGTGAGTGGATAA
ACTGATAGAAACGTTCAttaaagttacgaagaaaacgAGTGGATAAACCG
AGGTTTAGAGACGTTCGTTAAAGTCACAAAGAAAAACGAGTGGATAAACT
GAGGTTTAGAGATCTTAAgttacaatgaagtgaatacagtcgctctcatg
ttgtctttttac Run BLAST on NCBI transcript from alignment at scaffold_243:560647..561558 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054695 ID=TCONS_00054695|Name=TCONS_00054695|organism=Clytia hemisphaerica|type=transcript|length=912bp|location=Sequence derived from alignment at scaffold_243:560647..561558 (Clytia hemisphaerica)
gtaaaaagacaacatgagagcgactgtattcacttcattgtaacTTAAGA
TCTCTAAACCTCAGTTTATCCACTCGTTTTTCTTTGTGACTTTAACGAAC
GTCTCTAAACCTCGGTTTATCCACTcgttttcttcgtaactttaaTGAAC
GTTTCTATCAGTTTATCCACTCACTTTTTTCGTCACTTTAAGGAACGTCT
CTAAACCTCAGTTTATCCACTcgttttcttcgtaactttaaATAACGTCT
TTAAACCTAAGTTTATccacttgctttcttcgtaactttaacGAACGTCT
CTTAACCTCAGTTTATCAACTCACTTTTTTCGTCACTTTAAGGAACGTCT
CTGAACCTCTGTTTATCAACTCCGAGAtaaactcgctttcttcgtcaCTT
TGACTAATGTTTCTAAACCTCAATTGAAGTTgagaatcagaaaaaactaa
tgagccaatccagagaaaagctggtaacagacgaacgaacgaacggacga
atggacgaacgaacgagcgagcatcagttaatttaaaggacctctccatg
gtaggtccaaaaatgagagTTCGAATCTTGGAAAGATAATCAATAAAAAG
GCCCAAAGATTTCTTAAAATATGAGTTTCATAATAAATAATCGCTGACTT
TAATAACATATCAAGATCGCCATCACCGCGAGTCCAATACTTATCTACTt
ataaataaagttttaaagaaagaattttttcctttttatacaTGTCTCCG
TAATTTGCCTTTTTTTAGTGGAAAATTACTTTTATTGGCTCAAACTCCTC
TCCTCTTGGAGATTGAGATGTTACAAATCGAAGGTTTCTCTATTTAGCAA
AATGTTGGGAGAAATGACTATAATGAGAACAGATGAtgtttaattataat
tttttatttgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054695-exon-scaffold_243-1491911889:560647..561558 | TCONS_00054695-exon-scaffold_243-1491911889:560647..561558 | Clytia hemisphaerica | exon |
| TCONS_00054695-exon-scaffold_243-1510915933:560647..561558 | TCONS_00054695-exon-scaffold_243-1510915933:560647..561558 | Clytia hemisphaerica | exon |
| TCONS_00054695-exon-scaffold_243-1575043694:560647..561558 | TCONS_00054695-exon-scaffold_243-1575043694:560647..561558 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_243 | supercontig | scaffold_243:560647..561558 . |
Blast
The following BLAST results are available for this feature:
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