TCONS_00054681 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054681
Unique NameTCONS_00054681
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054681 ID=TCONS_00054681|Name=TCONS_00054681|organism=Clytia hemisphaerica|type=transcript|length=177bp
GTCTATCCTGAGTCTATCGTTTCTCTCGAAAATATACCAATCGAAAATGT
CAAGGTGTTCAGGTATCTTGGTGATGAAGTAAAATACGACGAGCCGTCTA
CGGGAGATGCCGAGATTGACCTACGAATCAATATCGCACAAGCCAAGTTT
TACGAAATTATAAAGAAGCTTACAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_243:233076..233252

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054681 ID=TCONS_00054681|Name=TCONS_00054681|organism=Clytia hemisphaerica|type=transcript|length=177bp|location=Sequence derived from alignment at scaffold_243:233076..233252 (Clytia hemisphaerica)
GTTTGTAAGCTTCTTTATAATTTCGTAAAACTTGGCTTGTGCGATATTGA
TTCGTAGGTCAATCTCGGCATCTCCCGTAGACGGCTCGTCGTATTTTACT
TCATCACCAAGATACCTGAACACCTTGACATTTTCGATTGGTATATTTTC
GAGAGAAACGATAGACTCAGGATAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034442XLOC_034442Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054681-exon-scaffold_243-1491911889:233076..233252TCONS_00054681-exon-scaffold_243-1491911889:233076..233252Clytia hemisphaericaexon
TCONS_00054681-exon-scaffold_243-1510915933:233076..233252TCONS_00054681-exon-scaffold_243-1510915933:233076..233252Clytia hemisphaericaexon
TCONS_00054681-exon-scaffold_243-1575043694:233076..233252TCONS_00054681-exon-scaffold_243-1575043694:233076..233252Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:233076..233252 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054681 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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