TCONS_00054593 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054593
Unique NameTCONS_00054593
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1811

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054593 ID=TCONS_00054593|Name=TCONS_00054593|organism=Clytia hemisphaerica|type=transcript|length=1811bp
tgttttgatgtttttaattataTTAAGATCTTTTTGATGAATTGATAAAT
TGAAGATATTACCTACATACCTTGCTCACCACATCTTATGTATTTACCTT
TTTTCGTGCACCTAGTAGAAAATCCAAAAGAAAGTATGGCGTTGACTGCT
GCTCAACTCCTGGACGAATTGATGGGACGGGATAGAAATTTGGTTCCTGG
TGAGAAATCATCACAAGTACCCTGGGACCATGAAGATgtcTGTAGGAGTT
TCCTTTGTGGTTTTTGTCCCCACGATTTATTTGTCAACACTAAAGCAGAC
TTAGGAACTTGCACTAAAATTCACGACGATCAATTGAAATCAGATTATGA
GAAAAGCAGCCGTTATGGGAAAATGGGTTTCGAAGAAGATTTCACACGAT
ATTTAGGTAGCATACAAGGTGACGTTGATCGGAGGATACGCAGAGGGCAT
GAACGTTTACTAATCAATCAAGCAAGGGAACAGGAATTATCAGAGAAAGA
CAGCGAGAAAACGAAAATGTTGACTGACCACATCAACAAGCTCCTGGAAG
AGATCGAGCAACTAGGATCAGAAGGAAAGGTAGAGGAAGCGCAAGGTGTC
GCTCGTCTTGTCGAACAACTGAAGGAGGAACGAGAACAGAGTAAACAAAA
CCATTCAGGCGTTGCCTCTCAAGAGAAACAAATGGAAGTTTGTGAGGTCT
GTGGAGCTTTCTTGATCGTCGGCGACGCACAATCGCGCGTGGACGACCAT
CTACAAGGGAAACAACACGTTGGGTATGCCAAAATCAAATCCACACTTGA
CGAAATGAAGAACCGGTCATGGGAGAGACGTGGAAGagaaaaatcagaga
aaagcGACCGCGATCGGGATGAACGGGACTCGGAACGTTCAAAGCGGAGA
GAAAGATCTGGCGAACGAAAGAGCAGTCGGAGAAGTCGATCAAAGAGTCG
GGATCGCCGACGTGATAAGAGCCGTGAACGTAGAAGAAGTCGGGATAAGC
GTGACGAACGTCGTTCAAGACACGGCAGTCGTGATCGGGATCGGGATAGA
AGTCGTCGGGATTCGAGAAGAAGTAGTCGTCGTAGTCGTAGTCGAAGTAA
GGATCGTAGGCGAAGAAGTAGAAGTCGGGAACGAAGCAAGGATCGTCGCT
CAAGACACGGTAGTCGGGACCGCGATCGCCGTGAACGAAAATCGTCAAAA
GAAAAGGAACGTCGTACGGAAGATAAAATGGACAAAGGGACAGCGATGGT
CGATTCGACGGAACAAAACGGGACGGAAGAAAGACGGTTAAATGAAGGGG
AGGAAAAACAAGTTTCGGCANTTCCGGACCAGGGTTTTATAAGGATTACA
GTATGTTAGGTTCGGTTCAAAATTACAACAATTTGGATATCTTTGATTGT
TTTCCATAGTTTTTCTGTTTCTCTGTCTTTTGGTNAAAGGTATAAATTCT
ACTGAAAGCATAGATAAGAAAGACCAGACGAACGAAGAAGCTATCGACTC
AAACACCATCATGGAATACTGAGATGTGCACAAACATTCTGAAGGTAGGT
TGTATTAATGTTTATCGCAACagacaaatcaaaacaatttggaAAGTCAG
TGAATTGGTCATAATTATAACAGACAAAATGTCTGAAGAGAGAGTATCAA
AATTGGTAATTCTTTCCCTATTTGGATAAAAAAGGATGAACTTCTGCATG
ATGGTataagtattttttcaaacgaGATTTTTAAAGAGTTTCGTGCCCCC
TAAGCGGACCTTGAAATCAcacaattattttttgaaattcacgCAAGGTT
TTCCAGTTCAT
Run BLAST on NCBI

transcript from alignment at scaffold_243:52471..61776-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054593 ID=TCONS_00054593|Name=TCONS_00054593|organism=Clytia hemisphaerica|type=transcript|length=9306bp|location=Sequence derived from alignment at scaffold_243:52471..61776- (Clytia hemisphaerica)
TGTTTTGATGTTTTTAATTATATTAAGATCTTTTTGATGAATTGATAAAT
TGAAGATATTACCTACATACCTTGCTCACCACATCTTATGTATTTACCTT
TTTTCGTGCACCTAGTAGAAAATCCAAAAGAAAGTATGGCGTTGACTGCT
GCTCAACTCCTGGACGAATTGATGGGACGGGATAGAAATTTGGTTCCTGG
TGAGAAATCATCACAAGTACCCTGGGACCATGAAGATGTAAGCACATAAT
ATGTTTGCGTCCTGTTTCATATTTTGTTTTAATGCTGGATATTGCAATAT
CCCCCGCTAACACATTAGTAGTCGTAATTTATTCATTTCAATATTTTCTC
AATACCTCTGCAGGCTTCAACGTGTCGTAATATGCACAAGTAATTATGAA
TTTAGATTATGCTCCTAAATATAAAGGCATCGTGCTTGAAGGTGTAGAAA
GCCTCTGAAGTCTGCTTTATTGTCACCAAATATTGAGCTTTAGAGTTTTT
AGAATACACTTCTGAGACAATTAAAGTCCTTAGACAATTACATGCAACAA
GTAATTTTTAATTTTCTTTTCTTTTCTTTTTCAGGTCTGTAGGAGTTTCC
TTTGTGGTTTTTGTCCCCACGATTTATTTGTCAACACTAAAGCAGACTTA
GGTAATCACACTTTCGAAATCTAAGTTTTATTACCCTTTATCTAGGCATC
AGAATAATCATCCTGTTGATACCCAATTTGATAAAAAGGAAGAACCAAAA
GGATTATAAAAGACATTTCCTAGTCATAATTTGTTGAATTGATGCATCCT
TTTGTAAACATTCTTTGCTTGAGAAGGGAAAAGAATAACATTCTTCCCTT
TTTACGGGTGTTCCCTCACCCTTTTTTGACTTCAATATTATTTAACAAAA
CCTTTTATTCCAACCTCGTTGTACTTTTTTGTCCTTTTAGGAACTTGCAC
TAAAATTCACGACGATCAATTGAAATCAGAGTAAGACATCAAATTCTCTA
AACTACTAATTCATGAAATGCACCATTGCAATGTCTTCTGACATTACATC
ACAGACCCAACAGCTGATTGGTCTCAAGTGACGTAAAATCAATCAATACG
TCACTTGCAACCAATCAGCTGTTGGGTCCGTAGAAGACATTGCAATGGTG
AATAACACAACAGAAATCATACTACAGTTGGCTCTCTCTAACTCGATCTT
CAAGGGACCAAAAAAAAAATTTCGAATTAGAGAAAGATACGAATTACATA
GAGCTTTTTATACTACTTTCAAGCGCTGAGCGGACTAATACTTTAGTGTG
AACAAAAGGAAGATTCGAATAATAGAGGTTCAAACTAGAGAGAGTAAACC
TTATTACACTTATAGGCAACTATAAGCCCTCGCTAATCAATTTTATACAC
AGGACATTCGTTTTCCAACCCCCTTTCTTTAACATTTGTGAAAGACTTTT
CTTTTATGTTAACCCTATTAGCCCCAGGGGGGTAGAATCTACCACGCTAC
CACGAAAATTTTTTGAAACGACTTGAAACTTTCTGACTATTAGTAAAATC
TTATTAAGAGTACTTGTGCAAATTTTTAGGGTCATAGGTCCTCTAGGTCA
GGTTTTATGACTCTATTGTAAAGCATGACATAAAACCAAGCTAAAATCGC
TTAAAACTCAAAATATTAAAATTGCGATAACTTCTCAAGTATTGAGGTGA
TAGGTATCAACAATGTGATTTCAAAAAATTGTCATTATTTATGACGTCAT
CAAATTTTGAAAATTTTGAAAATTTTCAGCATTGATTTTAACAAAAAATC
TTACAATTACTCTCGGGTATCTAATAGCCATCCCCCCGCTAATTAATTTT
TCGAAAATTTTNTTTTTCCCCCCCCCCCCCCCCCCGCTTATTCCAAACCC
CCCGGCTATTAGGTACCCAAGAGTATGTTAAAGAAAAATCTTTTTGGACC
TACCCCGGTGGAGGTCCTATAAAATAACATCTGTCCGCTCGTTCGTTCGT
CCGTCCGTTCGTTAGCTATCAACTTTTCTCGAGATTGGCTCATTAGTTTT
TTCTGATTTTTTGCACAAAGATGTGTAACTATAAACCCTCGAATGTGACG
GAACCCGATTTTCGAAAAGAAAAAATTTTGGCCAAATTTGAGCCAAAAAA
CGGCTAAAAAACGGGTTTTTTTGAAAAATTCGATCATTAATTTATATATT
CTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGA
AGAAAAAGAATTTTTCAGCTCAAAAAACGCATCTTTATTTAAAAAAATCG
TCATCAAATATTTTTTTCTTCCTGGAAGTTTGTGTCATGATGGAGAACAT
CTGTACCAATTTTCATGGTCATAGCTCTTCTAGATCAAAAATAATCGAGG
GTGGTAGATTCTCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGTT
TTTTTCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGTTTTTTTCCCCC
CCCCCAAAAAAAAAAAAAAAAGTGGTGTTCCCCCCCCCCCCCCCCAAAAA
AAAAATCAAAAAAGGTTGGGGTTAATAGGGTTAAGTGTGGCATTCCCCCC
ATTGTGTGGTGACATGTGAGGAATAAATTTTGGTTACTTGAATTGACTTT
TCGTTGCCTTTCGAAGAGAAAGTTTTAGATTTCAAAAATACATTTATGAC
ATATATAATTAACCAGTTCTTTCGAGGCACATGTTTAACTTTCCTTTTCA
CGCGCTAAAATTTTGTGTTTTTGTTTTCATTATTGATCTCGCACCAAGAT
CACAATGTGAAAACGTGTGATAAAATTATTGTGATAGTGTGTTTCAGACA
GATTGTCTCTCATGCACTATCGCGTGTTAACACGCAGTGTAAACCAAGCT
TTAGCCTTTCCCCATCCACATTTTTGTCTTCATCATTTGCTTGGAACATT
TTCTTATGATTGCAATTTTTTGAATGATTTGATTTCCCATGCATGGTTGT
TGGCATAGATTTCTAAAGCCCGAAGGGCTAGATGTTAAACTTTTGCTGAA
AAGTGTGCCGTGGTTGGGTAGGAAATCCTACTTAAGTCACGTGATATTAC
AATGAAATTTCAGCGCTTGACCAAACAGAACCTTCGCGGGTTTTTTCAAT
TTTTTTTGTCTACGATGGCTTAAAGCCCTTTCGGTCTAATGGTTGTTGGT
AGTGATTAATGACTCTCCATTTGTTTAGTTATGAGAAAAGCAGCCGTTAT
GGGAAAATGGGTTTCGAAGAAGATTTCACACGATATTTAGGTAGCATACA
AGGTGACGTTGATCGGAGGATACGCAGAGGGCATGAACGTTTACTAATCA
ATCAAGCAAGGGAACAGGTATATCACGTTCACGCGCCACCATTACATTGG
TTGAATTCATTTTTTTTTAACTCGACCTTGAATCAATCAAGCAAGGTCGC
ACGACTATTTAGATACTCCCAACTAAATTTTTAAATCAGAACCCTGTTTC
TCCACCTTCCTTTGAAAAAGGTCCACTGAATGAAATGGAACCCAAATTAA
CTAANAAATTTTTAAACCAGAACCCTGTTTCTCCACCTTCCACTGAATGC
ATGGAACCCAAATTAACTAAACTAAATTAGTGTAGAATTTCATTCTGAAA
ACTTTTGTCCATACATTTAGGAATTATCAGAGAAAGACAGCGAGAAAACG
AAAATGTTGACTGACCACATCAACAAGCTCCTGGAAGAGGTACAAACATT
AGAAATATTTCACTAACAAGTAACCAACAAACTTGAAGTAACTTAAAAAT
ACTTGCGGTCAAATTTTTAAAATTTTAAGGAGAATTCTCCCTTTTGTGCC
AAATATTATGATGATGACGATGATGATTGTTTGTTACACAACCAATAATG
CTAGGGAAGTTTACCCGGTAAGCAATCATGGTTTGACCACTATATTATAC
ATTTTTTTATAAGCAGCCAGGTTGTTAAGGCTTGTGGGCTCAAATTAGTC
CTTTTTTTTTCACTGTCTCATAAAAGTAAAAGCTTTTTAGATAAGCTTTT
TACCCGTTACCCAATGGTATTAAATCAGGGATGGTCAAATCAAATTTTGT
CAGACAATGAGCTATAATGCTAAATAACCCGACGACTAACCCGATAATTT
AGGTTGTTTTTTTGAATCGCTTTCAAGCTGATGGGACCAATAATATTTAA
GTTCAAATTACAGAAAGATTTAGAGAGAATTGACTAAAATATTTTCATGT
CTGTTTCTTCGTAGATCGAGCAACTAGGATCAGAAGGAAAGGTAGAGGAA
GCGCAAGGTGTCGCTCGTCTTGTCGAACAACTGAAGGAGGAACGAGAACA
GGTACTCTCTCTCTAACACCTTTTCCATTAGCGAGTTTATGTATTTGCAC
TTTTGAGGACGGTAAAGTGACTGAAGCGATTTGGAATAACCCGCAGTTCT
GACCCACAAAATCGAGGACGGTAAAAGTGCTGATTTACCGTCGTCCTCAG
CTAGTTAGGATCTAGTCAAATTCGAACCTTACCGTCTCAGTCGCTGAAAA
ACACACATACATAAACTCGGTATTCTTTCCATGAGCAGGGTTGAAACAAA
AGTTATAAGAATTCAACCTATCAATATGTAAAGTGCAAGGAGTCTGGATC
AGTGTTTACTCCAAATAAACGCGAGGCTCTAGTTTCAAAATTTATGTGTT
TGATTACTAAAATCTGCTGTTAATCATGGAAAAGCTATTGCGATTGCCAA
TTTCAAAATAAAACTTTGATAGCTCGATTTTCAACGTTTTCGTGCACTTT
CTTAAAGTTACTTTTTTATTCAAGAGTCTATTGTTTTTATCTAATGAACC
AAATTTAATAAATGACCCATCAAAATTTAAGTTTATCTTTTTTCTTTCCG
ATGAAAAAGGAAAATTTACTTTAAAGAGAGAAACCTTTTGTGGCGCACCC
GCCAATTAAATTGAGGTTCACTCTTCAATGCAAGGAGGGTATCTTACATT
TTCACAAAAGCGCTTCTACACTACTTGTGTATTGGATACAGTCCGGAGAA
TTTTCCTTGTATTTTCGTTACCTGTTTCCTTAAAAGCTAACCGCGCCAAT
AAGGTTTGATAGATGTATTCATTGTATAGCATGCTTCTCTACTTCATCCT
AAAGAAGAAATTGGCCATAGTAAGTAAGTAAATTTGCGACCGCAGTCGGA
GGCGACCCAAAGGCTCCTCTTTCCATAGCTATCTACTCTCGGGTACCTAA
TAGCCGTCCCCTCCCCCCGCTAATTAATTTTTCGAAAATTTTCCACCCAA
GAAATTCTTATTCCAACCCCCCGCTTATTAATTTTTGGGAATGTTTTTGA
AACTTCCCCTCTTTTGTCCTAATTCTGCTGTATTAGTTAGCCTCCTTTTC
AAAAATTTTCCACCCAGGAAATTTCTATTCCTATTTTTTTATTTTATTTT
TTCTAATTCCTATTTTTCTATTCCTATTCTTATTAAGTTTTGAGAGTTTT
TCCAATCCCCCCGCTTATTCCAATCCCCCCGGCTATTAGGTACCCGAGAG
TACCCAATATTAGGAGAGGGCGCCACTCTTTCTCTCTGGATTTCTCCACT
TACCCTCGATCCTTCTCTTAATTGCTGAGCATCAAGCAGAGAGGCATCAA
GTACCATTTTGAGAATCTTTGGTATGACCCGACTAGGGGTTGAACCGACA
ACCTTGTGAACCGTAGCCGGATGCTCTACCACTGCACTACGGTCACGCAA
TGATAAATGGCCATAGTAATTGTATTAGGAAATTCAATATCACTATTCTG
TATCGTTTTTTCCATATTTTGTCTTACAGAGTAAACAAAACCATTCAGGC
GTTGCCTCTCAAGAGAAACAAATGGAAGTTTGTGAGGTCTGTGGAGCTTT
CTTGATCGTCGGCGACGCACAATCGCGCGTGGACGACCATCTACAAGGGA
AACAACACGTTGGGTATGCCAAAATCAAATCCACACTTGACGAAATGAAG
GTAATTACCCAGCTGGCACAAGACGTTGTTTCAACGTTCATCTAACGTTA
TGGACATGTTTTTTAATTGTTTCATTTTTGGCATTTTCAAAAAAGCTAAA
TTTTGATTGGGGTAACTTGGAGGTCCAAAATTTTCATAGGATGTTAGTAG
TGATGATAGGACCCCAAAAAGTTCTTTTCCCAAAATTCTAGCTGTTGTAG
GGGCCAGTTAGGAGCAAATTTTAGCATATGTATGTGTTTCGGAAAATGAT
CTAAATCAGAGCTAAAAACCCAGGAAGTTGTCTATCTGACTAATGATTCT
CATAGAGGGATGGCAATTAAAGCAGCCTATTGTTAAAAGGCCCACATTTT
CCTATTGTGGGGCCCTTTTTAGAGCACTTTTTTAGCACCTATTTCCCCAT
TGACAATAAGTGCCAAAACACCAAAGTAAAAGGCTTGATTGGGTGTAAGA
CTTCCATAACTTCTTTTGAAATAGTTGAATAATCAAGTTATTAACACCAA
TATAACACTTGAGCTGTTAAAGGGCCCTTTTGGAGCTAAATTTAGCATTT
TTCCGCTGGAAATACTGCAATTTATTCTGCTTCTCTTACTAAAATTAACT
TTACACCTAGTCTAATTTTTGCTAAATTCAGCTCATTTTGAGACCTAGGA
ACATAAAGTAACCTCATGAAGTTCTGTTCAATTGTGTATCAAACATTAAT
GATAACTTATTTGATGTTCAAAACCTTTTCAGGGTCCAGAATCGAGCAAA
TATTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGAAATAACAATAACCTTCGGGTTTTCAAATTTTAGCATAAAGACAT
GGCCTTCAAGAACTCTAAGTCCAGTCAATGCTAAATTTTTGCTCATAAAA
GGACCCTGGAGTGTTTTTGGTTTGGTTTTTCTATCTTTTTGAAAGCCTCA
AGTATGCATAATATCAATATCATAGTTCTTTTGTGTTTATCTTAACTGTG
CTGGTGGTTTAAAAAAAAGCCACACCCAATGCTAAAACCATTTTTAGTGA
TTGCTTATGTTGGTATATTGATCTTATAAGGTATAAAAAGGCATGTGCAA
AGTATTAGAATCATAGCAGAAAAATTGAGAGAGATACAAGCCTCTAAATC
CAAATGCTAAGTATTTGCTCCTACTAAAATGCTAAGTATTGGCTCATTTT
TGGACCGCACTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAGTTCATC
TTTTCCACGCAACCATCATCAGGGCATAATTTTAGTTCATTCATTATATT
AGAAATGAATGATGATTTCCCAAGACCCCTGAAAACGAAACAATTAATAA
ACGTGTCCNGTCGGCGACGCACAATCGCGCGTGGACGACCATCTACAAGG
GAAACAACACGTTGGGTATGCCAAAATCAAATCCACACTTGACGAAATGA
AGGTAATTACCCAGCTGGCACAAGACGTTGTTTCAACGTTCATCTAACGT
TATATGGACGTTGTGAACGCTAGATAGACGTCGAAAAAACGTTATGTGCC
AACTAGGTAACCAATCAAACCAATTATTCAAATATAACATACACCTACCC
CTGTCGTGGAGATTTTCGAAGGTCCTTAAAAGGGGCAAATAATTTTCGGA
GGGTGGGGGCAATTTACACAAGGAATATCTTGCATTTAAAAGCCATGGCA
AAATCATTCCCCAATCTCTGTAGGGGTATCCATATAGAATGTACAAACAG
AAGGAAAAGATTTCTATTGTTCTCTGATAACAAGGGGAGAGTTGTCAAAT
ATTCGGAAAATTTTTGCCTTCATACTACGGTATATGGACGACCCCTGGGA
ATGCTTAGAGCTCTTTTTTAGAAGAAAAAGCACTGATGCTGTTCTCGAGA
TGGATAGTTGAATGTTTCAGCTTAATAAATCCTTTCTTCTCGCACACATC
TTTAGAACCGGTCATGGGAGAGACGTGGAAGAGAAAAATCAGAGAAAAGC
GACCGCGATCGGGATGAACGGGACTCGGAACGTTCAAAGCGGAGAGAAAG
ATCTGGCGAACGAAAGAGCAGTCGGAGAAGTCGATCAAAGAGTCGGGATC
GCCGACGTGATAAGAGCCGTGAACGTAGAAGAAGTCGGGATAAGCGTGAC
GAACGTCGTTCAAGACACGGCAGTCGTGATCGGGATCGGGATAGAAGTCG
TCGGGATTCGAGAAGAAGTAGTCGTCGTAGTCGTAGTCGAAGTAAGGATC
GTAGGCGAAGAAGTAGAAGTCGGGAACGAAGCAAGGATCGTCGCTCAAGA
CACGGTAGTCGGGACCGCGATCGCCGTGAACGAAAATCGTCAAAAGAAAA
GGAACGTCGTACGGAAGATAAAATGGACAAAGGGACAGCGATGGTCGATT
CGACGGAACAAAACGGGACGGAAGAAAGACGGTTAAATGAAGGGGAGGAA
AAACAAGTTTCGGCANTTCCGGACCAGGGTTTTATAAGGATTACAGTATG
TTAGGTTCGGTTCAAAATTACAACAATTTGGATATCTTTGATTGTTTTCC
ATAGTTTTTCTGTTTCTCTGTCTTTTGGTNAAAGGTATAAATTCTACTGA
AAGCATAGATAAGAAAGACCAGACGAACGAAGAAGCTATCGACTCAAACA
CCATCATGGAATACTGAGATGTGCACAAACATTCTGAAGGTAGGTTGTAT
TAATGTTTATCGCAACAGACAAATCAAAACAATTTGGAAAGTCAGTGAAT
TGGTCATAATTATAACAGACAAAATGTCTGAAGAGAGAGTATCAAAATTG
GTAATTCTTTCCCTATTTGGATAAAAAAGGATGAACTTCTGCATGATGGT
ATAAGTATTTTTTCAAACGAGATTTTTAAAGAGTTTCGTGCCCCCTAAGC
GGACCTTGAAATCACACAATTATTTTTTGAAATTCACGCAAGGTTTTCCA
GTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034405XLOC_034405Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054593-exon-scaffold_243-1575043694:61540..61776TCONS_00054593-exon-scaffold_243-1575043694:61540..61776Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1575043694:61126..61192TCONS_00054593-exon-scaffold_243-1575043694:61126..61192Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1575043694:60797..60836TCONS_00054593-exon-scaffold_243-1575043694:60797..60836Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1575043694:58410..58548TCONS_00054593-exon-scaffold_243-1575043694:58410..58548Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1575043694:58038..58106TCONS_00054593-exon-scaffold_243-1575043694:58038..58106Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1575043694:57426..57512TCONS_00054593-exon-scaffold_243-1575043694:57426..57512Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1575043694:55777..55947TCONS_00054593-exon-scaffold_243-1575043694:55777..55947Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1575043694:52471..53471TCONS_00054593-exon-scaffold_243-1575043694:52471..53471Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:61540..61776TCONS_00054593-exon-scaffold_243-1510915933:61540..61776Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:61126..61192TCONS_00054593-exon-scaffold_243-1510915933:61126..61192Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:60797..60836TCONS_00054593-exon-scaffold_243-1510915933:60797..60836Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:58410..58548TCONS_00054593-exon-scaffold_243-1510915933:58410..58548Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:58038..58106TCONS_00054593-exon-scaffold_243-1510915933:58038..58106Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:57426..57512TCONS_00054593-exon-scaffold_243-1510915933:57426..57512Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:55777..55947TCONS_00054593-exon-scaffold_243-1510915933:55777..55947Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1510915933:52471..53471TCONS_00054593-exon-scaffold_243-1510915933:52471..53471Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:61540..61776TCONS_00054593-exon-scaffold_243-1491911889:61540..61776Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:61126..61192TCONS_00054593-exon-scaffold_243-1491911889:61126..61192Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:60797..60836TCONS_00054593-exon-scaffold_243-1491911889:60797..60836Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:58410..58548TCONS_00054593-exon-scaffold_243-1491911889:58410..58548Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:58038..58106TCONS_00054593-exon-scaffold_243-1491911889:58038..58106Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:57426..57512TCONS_00054593-exon-scaffold_243-1491911889:57426..57512Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:55777..55947TCONS_00054593-exon-scaffold_243-1491911889:55777..55947Clytia hemisphaericaexon
TCONS_00054593-exon-scaffold_243-1491911889:52471..53471TCONS_00054593-exon-scaffold_243-1491911889:52471..53471Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:52471..61776 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.6727	13.9399	12.3813	19.1817	26.1768	21.2732	24.8369	27.9019	18.1691	19.4384	24.4306	17.5782	24.2372	29.1234	19.6883	19.8801	16.1863	20.4999	8.51735	9.3259	9.26898	15.8116	8.78674	11.5447	58.9731	54.493	10.1253	14.1598	5.55696	4.35792
Blast
[Close]
BLAST of TCONS_00054593 vs. Swiss-Prot (Human)
Match: LC7L3 (Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 9.338e-97
Identity = 148/236 (62.71%), Postives = 187/236 (79.24%), Query Frame = 1 
Query:  142 LTAAQLLDELMGRDRNLVPGEKSSQVPWDHEDVCRSFLCGFCPHDLFVNTKADLGTCTKIHDDQLKSDYEKSSRYGKMGFEEDFTRYLGSIQGDVDRRIRRGHERLLINQAREQE----LSEKDSEKTKMLTDHINKLLEEIEQLGSEGKVEEAQGVARLVEQLKEEREQSKQNHSGV---ASQEKQMEVCEVCGAFLIVGDAQSRVDDHLQGKQHVGYAKIKSTLDEMKNRSWER 828
            ++AAQLLDELMGRDRNL P EK S V WDHE VC+ +LCGFCP +LF NT++DLG C KIHD+ L+  YEKSSR+ K+G+E DF RYL S+  +V+RRIRRGH RL ++Q ++       + K+ EK ++LTD I+ LL++IE+LGSEGKVEEAQG+ +LVEQLKEERE  +   S +   A+QEKQMEVCEVCGAFLIVGDAQSRVDDHL GKQH+GYAKIK+T++E+K +  +R
Sbjct:    2 ISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKR 237
The following BLAST results are available for this feature:
BLAST of TCONS_00054593 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LC7L39.338e-9762.71Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1... [more]
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