TCONS_00054400 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054400
Unique NameTCONS_00054400
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1363

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054400 ID=TCONS_00054400|Name=TCONS_00054400|organism=Clytia hemisphaerica|type=transcript|length=1363bp
GCTTTATAtatttatacaaaaaaaattgttacaGGGCTTATCTAAAACTT
TGTGATTTGTctattaaatttaaattttacaatgaatttataaatttaga
actttattgatgatttttttagcTTCGAGAAATATGTTATTGATCATCCT
TTATAGTACGGCCGTCGATTCGATCCGATTTGACTTGACTCTCATCTTTC
TTATCTTTGAAGGCTTCTtcggctgaccttccagcgcagctggtttattc
aaATTATCACAAGTTGAGGAGTTAGTGGTCGATGATGCGTCACTACAACC
CATTTCAGTACCAATATTTCGTTTCTTTTTCAAACGTCTCAGAAAGAATC
TTCTCAGAACTCGTTTAACGTCTCTACTTAACCAACCATAAATCAACGAA
TCCAAAATATTGTTCAAACATATCAAATGACAAGCTACAAATTGAAAATG
TTCTACTACGTGTTTCCCTAATAAGTCATGCATGAACCATATCAAGCATG
GCGACCAGCATAACTCAAAACTTAACACAATTCCTATACAAATATACACC
AATCGATATTGTCGACgtaaaagttgttttttacgATTCTTATTACGACT
TACACCAGCAATACTTCGCAACTGTCTACGAGCTTCGCCATAAATAATGT
AATTAACAGTATTTAGGACCAAAAATCCACTCATAATAACACTGACAAAT
GATATCTGTAGGGCCAACATGACAGTTTTCATAGGTAGATATAAATAGCA
AACTAGAAGTGCTATGAAATAAGTTAAAGCTATTGCCAATGTGACACCAA
CAATGATAAAGAAAACTTTAGTAGTGAATTTTTCTTCGTAGAGAAAGGGT
TTCTTGATGGCTAACAAGTGGTCCAGCGTCACAGCCATTCGATTGATTAA
AGATAAAATCATAGACGTCACAACGACAATATAGAAAATGACTTCCTCAT
CCATCAGTACGTGAGTTAGTTGTAAATTCGCTCTTTGCTCGTGAATATGG
ATGTGAAATAGCGCAAGTGCTGCATACCCGACCATTGAAAATGAAGCAAA
GCAATTTGCCATGAAAAGGTTCACCAAAAATTTATTCGAAATCCGacgta
atagacctttttgatGGATTATGACAAAAATAGCGACGAGAGTTAATAGA
GTTCCAATGCTAGGCTGGATTGTCATGACAACGAAATGGGTGAGGTTTGA
CGTGTCCGTGTTTAAACTATTGTTATGGTGGCCCATTGTTgtattgtttt
tgttgaattGATATACATTGTTTTGATATACTGTCCAATTGTTGCCACCA
GTAATGTTGTTGGTACTTTGCATCGTTTTTATATTGATTCTATTTGTTTT
Tctagtttcacta
Run BLAST on NCBI

transcript from alignment at scaffold_242:1407867..1419734-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054400 ID=TCONS_00054400|Name=TCONS_00054400|organism=Clytia hemisphaerica|type=transcript|length=11868bp|location=Sequence derived from alignment at scaffold_242:1407867..1419734- (Clytia hemisphaerica)
GCTTTATATATTTATACAAAAAAAATTGTTACAGGGCTTATCTAAAACTT TGTGATTTGTCTATTAAATTTAAATTTTACAATGAATTTATAAATTTAGA ACTTTATTGATGATTTTTTTAGCTTCGAGAAATATGTTATTGATCATCCT TTATAGTACGGCCGTCGATTCGATCCGATTTGACTTGACTCTCATCTTTC TTATCTTTGAAGGCTTCTTCGGCTGACCTTCCAGCGCAGCTGGTTTATTC AAATTATCACAAGTTGAGGAGTTAGTGGTCGATGATGCGTCACTACAACC CATTTCAGTACCAATATTTCGTTTCTTTTTCAAACGTCTCAGAAAGAATC TTCTCAGAACTCGTTTAACGTCTCTACTTAACCAACCATAAATCAACGAA TCCAAAATATTGTTCAAACATATCAAATGACAAGCTACAAATTGAAAATG TTCTACTACGTGTTTCCCTAATAAGTCATGCATGAACCATATCAAGCATG GCGACCAGCATAACTCAAAACTTAACACAATTCCTATACAAATATACACC AATCGATATTGTCGACGTAAAAGTTGTTTTTTACGATTCTTATTACGACT TACACCAGCAATACTTCGCAACTGTCTACGAGCTTCGCCATAAATAATGT AATTAACAGTATTTAGGACCAAAAATCCACTCATAATAACACTGACAAAT GATATCTGTAGGGCCAACATGACAGTTTTCATAGGTAGATATAAATAGCA AACTAGAAGTGCTATGAAATAAGTTAAAGCTATTGCCAATGTGACACCAA CAATGATAAAGAAAACTTTAGTAGTGAATTTTTCTTCGTAGAGAAAGGGT TTCTTGATGGCTAACAAGTGGTCCAGCGTCACAGCCATTCGATTGATTAA AGATAAAATCATAGACGTCACAACGACAATATAGAAAATGACTTCCTCAT CCATCAGTACGTGAGTTAGTTGTAAATTCGCTCTTTGCTCGTGAATATGG ATGTGAAATAGCGCAAGTGCTGCATACCCGACCATTGAAAATGAAGCAAA GCAATTTGCCATGAAAAGGTTCACCAAAAATTTATTCGAAATCCGACGTA ATAGACCTTTTTGATGGATTATGACAAAAATAGCGACGAGAGTTAATAGA GTTCCAATGCTAGGCTGGATTGTCATAACAACGAAATGGGTGAGGTTTGA CGTGTCCCCGTTGAAACTTTTGTTATGGTGGCTCATTGTTGTATTGTTTT TGTTGAATTGTTATACATTGTTTTGATATATTGTCCAATTGTTGCCAACA GTAATGTTGTTGGTNCGAGGTTTGACGTGTCCGTGTTTAAACTATTGTTA CGGTGGCCCATTGTTGTATTGTTTTTGTTGAGTTGATATACATTGTTTTG ATATATTGTCCAATTGTTGCCACCAGTAATGTTGTTGGTACTTTGCATCA TGATTCTATTTTATTTTTATAATGTCACTAAAATATAAGACTTTTTCACT TATTCATCACATCTCCTCTCCGATGGTAGTCTCAAACTTCGAAAAAAATA TGTTAAGTTTATTGGCCTTCCCACCATATTTCTCTAAGGGTTGAAAAAAC ATTTGAAAAGTTTACAAAGTATTTATTTAAAGTATTTAAGTTTTATTCCC GTCGTTGAAAACACAACTAAAAAATGTCATCAATGCTTTTAAAAAGAGCC AGTGATAGAGAATCATAACATAAAGATCTGCATATTATTTCGATTCCATT AAAGTAACATTACCAAAACTAATAGTTTAGTAATTACTGTTATACATTTG GGAATCATGTTGTAAAAGATTTCTTTCGAAAGAAACTCATTTCAATTACA TTTGGAGGTTTCTGGGGAATTTGTAAATTGTAAACTGCACACTGAGGTCG TGTTCAGATCTGAAAGTTTAAGTTTAAGTTTTAAGTAATACTTTGTTGAT ATGGGAATTCAATTATAATCACTTTTCTTTTGTCATCATCGATTGGCGAT CTCGAGGAATCTCCTTTCCTAACTTNNTATTTACAAAAAGAGCATGCTTT TCACTTGCGAATTCTGATTTCGTCTACACGTTTTTTCTTTTATTAGAACC CAGTTTATAAGAACATTAAGGCTGAAATTCGTCAAAAAATTAAGAACATC GTAAGAACATGCCCAGCCTCAGTTTGGAAAAAAAATGACAAGAAACTACA ATTTTTTCCTCTTTTCAAGCAGTTTTAAACAAACTTAGGAATGGATTTTC TAAATCGAGAGTCAAATATTGTCCAAATTTTACCCAATTTTAAGTGCTCT TTATTTTGCATGATATTGTCGATTTAGAGTAGTCTGAAAATTTAAGAACG CATCTAAGAACATTTCAGGCTGAAAATTGCTAGAAAAATAAGCACATCCA GGCTCAGCCAAATTTTTGGTGTTCTAATAAAAAAAAAAACGTGTATTCAG AAAACTGTAACGAAATCGTAAAAACTTTTTTTTAAACCAGAGGGTGATTC CTTTATAAACTTTGGATTAACTAATGAGGAGCGTGCCGTTAGATACAAAA GAAATATAAAAGAAACATGTAGACCTAATTGCTTTAAACCTTGGTCTGAA CACGACCTGATACAGTATGGTAATATTTGCCCTTCATCTTTGATTCTTTC TACAATGATTAGATTGACACATGCGCGATAAAATTTCTATTGCAGTATTG GTCTTCAGAGGTTGAAATATTCTCAACCTCTGATACTCAGGGTACCAGAT CGCGGCTTTCACAATTTGAGTTCGTACAGTTATGAGACCAGTTAAGACGA CCCACTTTTCGCCCTGCCTTTTCTAATTGCGAATTGAAGTTGAGAGAGGC TGTCTAAAGTCAATGCATATCCCTCTTTTGACGTCAATGCAATGTATTCT TTCAACCTGTTTAAAGCAACTAACGAAACCGCTGGCTAAAAGTATGTTGC TCTTGAAAGATCACCATCATGGCATTTATACTGAACATAAGAATGTCATT TTTAAAGCATTTTCACCTGTAAATTGCCAAAAATAGCTCAGTAACGCTCA ATTTTCTCCAAGCGTGTACTACATGTTAAATCTATAGGTTATATTTCGAT CTTACTTTAACTAAAGAATACCGTAAAAAAGTTAAGAAGGCTATTCAAAA AAAGATACGTGCTTGCGTTTTACATGTTTTATATAAGAAAAAAATCTAAG GCATCTTAAAAGCTTTAAAGACTCCAAAACATCCATTTTCTTAGGACATT CTAAAATGTACCAAATTACTCTCATATAGTGAAAATTAAGAACCAATTTA AGGTTAAAACTAAAAAGTTAACAAAATTCAAAGGCTTTAATTTCTTGAAT TTTTTTTATTAAAAACGTCTATAACGAGTTCTGAATAACCCACTCTTACA GCGATTACCAACTAAACATTGAAATGAAGAAAACATCAGTCCCAAAAAAG ATTTTCATCTAATTTTCCTTACTGGTAAGATTACTCAACTTTGAAAGGAT TGAGATGACCCATAAAAATTGGTGAAAGTATCGTCCCTACTGAAAATAAT TAAATAAACCAATCCTCACTGCAAAATATTATGCTATCTTTCCCATCTCC ACTAAATATTCTGACTTGAAAACGAAAAAACTTCAATCTCCTCCCATAAA ACAATTTGAATATCAATCCCCGTCGAGTTTTTATCCCCACTGGCTGAAAA AAAATCTACGGGGTCTGTGAGAAAGGGGTGTTCAAAGATATGGACAGTTA ATGAAAGTCAATGTTTCTGGCTATCTAAACCATAAAAGAACTATCTGATT TTCAATGTTTTTAACGCACTGAAAGGGAACAATAGCTTTTCTCCTCCAGT GACAACGCCAGTCTACTGTTGGGTACATAATGGACAAAATACTTTAAGCC TATCTGATTAGTGAAGTGGGTGCAAAAATCTCAAAATTATAATAGTCTTT TAAAGGGTCAATATCTTGAGTTAGGTACAGAAATCACCTATACTCGCGAT AAATCTCTAATCTTAATTTTTTGTGAGCTTTCCAAAAATATACAACAGGT CTCTCCTTTCTCAAGCTAAAATTTTCATTAAATTTTGACCCTATGATTTT TGCCTGAGACCGTCATATTTGTCCGAAAAACAAACCAAAGTGGCACCTAT GTTATTTTCATTCCCCTACCCCTTAGCTTTCAAAAATGTATAACAAGTGC TTTTGACTAAAAATGTCGCACGATTTTACAAATTTCCCCCTACTATGAGT GAAATCCCTCAGTGGAAAAAATAGAAAACATTTTCAGAAGTTTTCAGACG CTTTTTATTCTTTTAGCCTAAAATTGTTATAGATGCTATATGTTTTAGAG TCCGCAGACATTTTTGCTATCGAAGCCTTAATTATAGGAAAAATGAAGGT ACTCTATTGTTTGAGAACAATAAAATTTTCGCTACATGACAAACCTGACA AAGAGGCAGACATTTCATTTTTACGAAAAGTGATGCTGGTTATCTTGATT TGATTCTTTCCAGGCCAGAGGCTCCCAACCGACTTGGTGTGTGAATTATT ATTTGTTTACAGTTCAGGTTTAATTTCAAATTTCAATTCAATTTCATTAC AATTTCATTACAATTTTATTAGCAATATTTTTCCCATCTCGGATTTTTTA TTCTCATTCATTTGTAACAGTCATCGAGTTTAAAGCCCGACGGGCCAGAG AAGAATCTCTAACATTTCCCAGGCAACAAAAAGTGAAGCCACTTATTTCC TATCAAGAACGCGCTGTAATTATGACGACGGATTGTTGTATCTAGCGGTT CCCTTGTTTTTGAGGACTGCATTGTTTTGAAATCTAGTTTCAGTCCGGCT TTGGTGTAAAAACCAAACTCGCAGGCGTTCTGGATGGGAAATAAGTGGTT TCATTTCCCATCGGGAAGTCTCGAGTCTAGCCTTTCGGGCTTGTAAGTCA ATGGTAACAACCTTGAGACAACCCCTAGTCTACGCACGTTCTCATAACAA CTGGTAAATTTCGCTTCAGACACTGAAATTCTTAATTTCGAGATTTTTTA AGCTACGATGTTCTTACAATATTCTTAAAATACCCTTAATAAAAAGGGTT TAATCATTATTATAATTATCAATTCATTATTTAATTCTAGTTAAATTTTT CTTTTAAGAAAAGGTGTATTCTCAAAAGTAAGTCGACGTTTGAACCTCCC CCGGTATACACTGAATTTCTATTCTATATAACTCTTATCTATATATTTTT CTGCAGGCCTGGACTCCTGGCAAATCTCTGCAACTATAATCAAGAAGATG TTAGGAGCAGAATTATCGGGGGATCCAATGACTAAGAATCAAATTAGCCA CCAGAACAAAGGTTAGAATATTTATTTGATATTTTGATTAATATTTTGCA CGAGACAAAGAGAAACATTAGAATTTATTTTCACACCTTTTGAAAATCAA TGTCTCCGCAATTACTAATCAAACAGCCAACTATTTCTTTCAAAATTGTA GAAAAATCACCCATAGACTTGCCTAAAAAAATTGTCTTAAGATTTTCTTT TTTATAGCCTTGATATTTTTTAATTTGCAATTTGGTAGAAAAAAAGTGTA ATTATAGTAATTTTATTTTTTATTGAATAAGTCGAAAGCCGACTAATTAG ACAAAAAAAATCAGAAATTAAGAAATTTCAGAAAATATATACTTTTATTG CTTAAAAATTTCTTTTTCGTAAGTTATTAACAAAAGAAGAGAAGGTGTCA ATCAACCTTATTGCATACCTTAAAAAGCTATGCACTGTTGAAAAGATATA TATAAGGAGAATAATTTAAAAGGTAAAAGATTTTTAAGAAAGATTTTTGC CATTTCACACCTCCTTCAAAGGGATGTACTCTTGTCTCCCAAATAGACGT CCCCCACTAATTGTTAAGAGAAAAAAATCCATTCCCCGCTCTTATTACGA CCCCCGTTTATTAAATTCGAATAATTATTACATAATTATTATAATATTTT ATTACAGTAGTGTAGATAGACTTTCTTTGTTGTTTTTGAAATTGCTATCA GTTAAAAAAAATTCTGTCTTTAAATTACCCCCTCTTATTCCATCCCCCTC GATTATTAGAATTTAGGAAATTTTCCTACCACCTGCTTATTCGAACCCCC CCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCCCCCCCCCCCCGGTCTATTCGGGAGACGAGAGTAA CTTTTTATATCTAACAAAGATACGAAAAATCTGAAAAATTGTCAAAAAAA TGTCCACATTCTTTTGAGACGGACTTAAGGTATAAAACCCCGGTCAGGGT CCAGGGGCGGGGGACCTACCCTTGTCGACCGACGGGGGTGCTCCGCTGAA GTTCGAAAAATGGACCCTACGTGGGACCCGAAATTTGCGAAAAAAAGTGA CCCTGAATGGGACTGAAATTCCAAAATTTTCTTAAATTTTCTACTTTTTC TCCAAATTTTCCAAAAATAGGCACCCTTAGAGGGACTGATTTTTCTATTT TGGTGCTTTTGCGACCCTACCTGGGACTCGTGGAAGTTAAAAAAGGTACC CTGACCAGCGGAGCATCCCCGTAACCCATCTTGCCCTAGTACCCCCGGGG GTCAGGGACGAAAAAAGGAAAATTTAAAATTGGTCTGAAAGTTAGCCTTG GCCCTTTCCAAGTTTTTTAAAAGTCAGCCATTTTTGACATCAGGGAAATT CCCCAGAAACCACAACCGGTTATTGGGAGTTGCACACCTATGTCTTTAAA GGTGATCCTTGTGACTTTCGGACTTCAAATGACTGAAAACGACTAAAAAC GACTGAAAATGACTGAAAATCATACTAAGTCTAAAAGTTGCTCCATAAAT TAAGAAAATAGTTTTTGCTTGCCTGTTAATGTCGTTTTTTGGCAAGTTGA AAAATGATAGGAAAAAATTCTTTAAATTTTTGAACTATAAGATTCAAGCT CAAGCAATAGTTCGAAATTCACCAAATTTGTAAGATTTGTTCTGATTAAA AAGGAGCACAAAATGAGCGAGATGGAATTTAATCTTGAATCTACGATGGC CCATGGAACCTTTAAAATCTTTGAATCACTGGAAAGTTCTGGAAAGTTTT ATCATACAATCTAAATATCGAATTACAGAGGTCATCGAGAAAGCAAGAAA AAACTGTTCCGCTCATTTTGTAGGCCAAAAAAAATGTAATTTTTCTCTAA ATAGGACTAAGCAAATCATCTATATATTAGTAGTTTGTATGTCTGTTTGT TTTCTGTGTGTCACTTTCGTTTTTGCTTGTTCTCGATAAGTGTGTCTTGA CTGATAGATCGGATAGAGCCTAGTTTAGACTTTATTCAGCCTTTGTTTTG AAATTTAAGGCCCATTTACATTTAGTAATTTTAATTTCTGCCTAGGCATC CTCGTCCTTTTGTTTTTCTCTTTTCTTTTGTTTGAAATATTTTCGAATGT ATTTAACGATCGTATTTATTAATGACATTCGAATTGTTTTCAAAACGAAA CTAGTTTCTTTTCCAGGGGGGGGTACTTAGGCAAAAATGGGGCCCGGGGG GGGGGCACTGGGTTTGCGGACTGACGGTATGTGTGGTTCAAAAATCGGCT TTTAAAATTGCACCCTTACAGTGAAGCAAAAATCAGTGAAAATCATACCC TTAGAGTGCATTTTTCCCCAGATTTTTGATCCATTTCGTGCAAAAAATGG TCAAAATTCTAGCATTTTTGGTCAAAACATCTAAATTTTTCAAGAATTCT CTGAAATTTCTACCCTTACAGTGCATCTCTAGTTTTTCCGACCCTTACAG TTACAGTGCATTTTAAACGTATTGGAAAAGGTACCCCTAGGACCCGCACA TACCCGTCGGTCTTTTTGCCCAGCTGCCCCCCCCCCGGGGGTAAGGGTCG GTTTTTCCACCTTTCAAAGTCTCTTTAAGGGTCGGAAAAATCAGAAAGTT TTTAATCAGTCTCTTTAAGGGTCGGAAAATTCAGATTTTTAGGACACTTT TTGATTTCCAGAGAAAAAATTGTCTAAGAAAAGTTTCTAAGGGTATGACT TTTTTCAAAAACCGAAAAAAAAATTCAAAAAGTCTCTCTAAGGGTCACCT TTTCAGCAAAAATCAGTCGTCCAAGGGTTGGTTTTCGGAGGTCCCGTCCG CACATACCCCTCATTCGCCAACCCTAGTACCCCCCCCCCCCCCCCGAGTT TCTTTTATAGAAAAGAACATTTCAAATGTAAATTAAAACCATTAAAACAT AAAAATCAAAAAGTTTGTCGAACAATAACAGCATTGAAAGGACAATAAAA ACCAAGAGAGCGATTAGTCCACCTTTTTCTTCATATAAATACATTCAAGT AGTCGATATTCACGATACTGTTAAAAACTGTGTACGTCATTTGAATTCGA AAAGTTATGACAGTGTTTAAAAAAAGCAATTTAGAATTGAGTTATTTATT TTTCTGAATCTGACAAAAAACAAAGAGTTGCACTATTCCTTGTGGCTTCC CCGCTTTTTCCTGAAGAATTGTCATTTCCACATTTCACTAATCTTTACCA TGACATACAAGTTTTTCAAACTATCAAGAACTGTACGGCGTATTTAATGC GAGCGAAGCGAAAAAAAGATCTGCGGGGAGGGCTAAATTCAAACTATGAA GAGATTTTTTTTCATTTCATCGTTTTTTAGGCAGCTTCAACATCCAAAGG ACTTTTAGTGCGTTCAGCTACAGCTTAACCGACGTGCGACGTCGGGGACC GGCTAATATAATTTTAATGATTTAGTGAAATTTCAAAATCAATTATCTCA ATTCCGAGAGAAAAATTAGCCATAGAAAATCTGGACATTTTTCTCAGGAC AAAGTTTAAAGAACATCAAAGAATTAAACTATTCTATTTTGTTCACGGTT ACTTTTTCTTTGAAAATACTAATACAATTGCAATATTTTTCCAAAAAGTT TCGTTTCCATAATTGCTTGCTTAAAAAGCAGTTGAATATCTGTTAACTTC GTGATTCGAATTATAATAAGTTGAGAAATTAATGGTCACTGATGCGTCAC TGCAATCCATCTCAGCACCAAAATTTCGTTTCTTTTTCAAACGTCCCAGA AAGAATCTTTTCAGATCTCGTTTAACGTCTTTACTTAGCCAACCATAAAT CAATGGATCCAAAATATTGTTCAAACATATCAAATGGCAAGCTACAAATT GAAAATTTCCTGCAACTTGTTTCCCTAATAAGTCATGCATGAACCATATC AAACATGGCGACCAACATAACTCGAAACTTAACACAATCCCTATACAAAT ACACACCAATCGATATTCTCGACGTAAAAGCTGTTTTTTACGATTTTTAT TACCACTTACACCAGCAATAGCTCGTAACTGTCTACGAGCTTCGCGATAA ATAATGTAATTAACAGTATTTAGGACCAAAAACCCACTCATAATAACACT GACGAATGATATCTGTAGGGCCAACATGACAGTTTTCATAGGTAGATATA AATAGCAAACTAGAAGTGCTATGAAATAAGTTAAAGCTATTGCCAATGTG ACACCAACAATGATAAAGAAAACTTTAGTAGTGAATTTTTCTTTGTAGAA AAAGGGTTTCTTGATGGCCAACAAGCGATCCAGTGTCACAGCCATTCGAT TGATTAAAGATAAAATCATAGACGTCACAACGATAATGTAAAAAATCACC TCCTCATCCATCAGTACATGAGTTAGTTGTAAATTCGCTCTGTGCTCGTG ATTATGGATGTGAAATAGCGCAAGTGCTGCATACCCGACCATTGAAAATG AAGCAAAGCAATTTGCCATGAAAAGGTTCACCAAAAATTTATTCGAAATC CGACGTAATAGACCTTTTTGATGGATTATGACAAAAATAGCGACGAGAGT TAATAGAGTTCCAATGCTAGGCTGGATTGTCATAACAACGAAATGGGTGA GGTTTGACGTGTCCCCGTTGAAACTTTTGTTATGGTGGCTCATTGTTGTA TTGTTTTTGTTGAATTGTTATACATTGTTTTGATATATTGTCCAATTGTT GCCAACAGTAATGTTGTTGGTACTTTGCATCGTTTTTATCATGATTCTAT TTTATTTTTATAATTTCACTATTATATAAGAATTTTTAGGGGTCTGGTAA AGCGAGAGATCATATTTTGTACAATTTTATTATAAGAAAGGTTTTCTCTT CGTTTCCAATACACAAGAACTTATCAAAAGAGTTTATGAAAATAATGTTG TGATCTTTTAAATGACCATTCGATTGTCGAATTCGACATGTTGATTTCAT CTAAATAAAAGTAAAAGAATAAAATATTGGAAGAGAAAAACGAAACAAAG AGAGACACAAATGAACCGAGGAAAAGTTTGTTTGACATTTTCAAGTTGAT GATTAACCAGTTATCACACTTTTACTCGTACAATATTGGATATATTTTTC TCGTTCAAAGTCTTCTATATTTTCTATATTTGACAAAATATGACGAAAAA TCTGAGCTCGGAAACTATTTCCCATATTGTACTCTGTACCGTCTGTTAAT TATTACATATTTTTAACTGTANTTTTTGCCATCGAAACCTCATGTTCTTA TATTGTTTGTTCTTCAAAAAAACGTGAAAATTGTAAAGTCTCGATTCCAT GGTTGGTTGCTTAAAAAGCAGTTGTAACTGAATATCTGTTGACTTCGTGA TTCGAATTATAATAAGTTGAGGAGTTAGTCGTCACTGGTGCGTCACTGCA ACCCATTTCAGCACCAAAATTTCGTTTCTTTTTCAAACGTCCTAGAAAGC GTCTTTTCAGAGATCGTTTATAACGTCTTTACTTAACCAACCATAAATCA ATGGATCCAAAATATTGTTCAAACATATCAAATGACAAGCTACAAATTGA AAATGTTCTACCACGTGTTTCCCTAATAAATCGTGCATGAACCATATCAA ACATGGCGACCAGCATAACTCAAAACTTAACACAATTCCTATACAAATAC ACACCAATCGATATTGTCGACGTAAAAGTTGTCTTTTACGATTCTTATTA CGACTTACACCAGCAATACTTCGTAACTGTCTACGAGCTTCGCCATAAAT AATGTAATTAACAGTATTTAGGACCAAAAACCCACTCATAATAACACTGA CGAATGATATCTGTAGGGCCAACATGACAGTTTTCATAGGTAGATATAAA TAGCAAACTAGAAGTGCTATGAAATAAGTTAAAGCTATTGCCAATGTGAC ACCAACAATGATAAAGAAAACTTTAGTAGTGAATTTTTCTTTGTAGAAAA AGGGTTTCTTGATGGCCAACAAGCGATCCAGTGTCACAGCCATTCGATTG ATTAAAGATAAAATCATAGACGTCACAACGATAATGTAAAAAATCACCTC CTCATCCATCAGTACATGAGTTAGTTGTAAATTCGCTCTGTGCTCGTGAT TATGGATGTGAAATAGCGCAAGTGCTGCATACCCGACCATTGAAAATGAA GCAAAGCAATTTGCCATGAAAAGGTTCACCAAAAATTTATTCGAAATCCG ACGTAACAGACGTTTTTGACGGATTATGACTAAGATAGCGACAAGAGTTA ATAGAGTTCCAATGCTAGGCTGGATTGTCATGACAACGAAATGGGTGAGG TTTGACGTGTCCGTGTTTAAACTATTGTTATGGTGGCCCATTGTTGTATT GTTTTTGTTGAATTGATATACATTGTTTTGATATACTGTCCAATTGTTGC CACCAGTAATGTTGTTGGTACTTTGCATCGTTTTTATATTGATTCTATTT GTTTTTCTAGTTTCACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034295XLOC_034295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054400-exon-scaffold_242-1575043694:1418572..1419734TCONS_00054400-exon-scaffold_242-1575043694:1418572..1419734Clytia hemisphaericaexon
TCONS_00054400-exon-scaffold_242-1575043694:1407867..1408066TCONS_00054400-exon-scaffold_242-1575043694:1407867..1408066Clytia hemisphaericaexon
TCONS_00054400-exon-scaffold_242-1510915933:1418572..1419734TCONS_00054400-exon-scaffold_242-1510915933:1418572..1419734Clytia hemisphaericaexon
TCONS_00054400-exon-scaffold_242-1510915933:1407867..1408066TCONS_00054400-exon-scaffold_242-1510915933:1407867..1408066Clytia hemisphaericaexon
TCONS_00054400-exon-scaffold_242-1491911889:1418572..1419734TCONS_00054400-exon-scaffold_242-1491911889:1418572..1419734Clytia hemisphaericaexon
TCONS_00054400-exon-scaffold_242-1491911889:1407867..1408066TCONS_00054400-exon-scaffold_242-1491911889:1407867..1408066Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1407867..1419734 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0438987 0.0806053 0.082187 0.0419335 0 2.34221 2.30424 1.05098 0.478779 0.32129 0.0783375 0.0573829 0 0.083527 0 0.0393532 0.0302578 0 0 0.0410085 0.0872749 0.0713794 0.0851358 0.260152 0.0534217 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054400 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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