TCONS_00054372 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054372
Unique NameTCONS_00054372
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1596

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054372 ID=TCONS_00054372|Name=TCONS_00054372|organism=Clytia hemisphaerica|type=transcript|length=1596bp
TTCCCTTCCATCCGGGTCGACAGAAACATCGATAATCATTCAACAAATCT
TGACAAGTGAATGCATTGATACATGGTGATGAAGCACATTCGTTTTTGTT
GTATTGACATCTTTTACCTTCCCATCCTGGTTTGCAAACACAAGTGTAAT
CATTTTTACCATCTATACATTGAAATGCATTCACACAAGGTGACGAATCG
CACTCGTTCCTCTCAACTTCACAGTTTTGACCAGACCAACCATCTTTGCA
TTGACAGAAATAAGTATTGTTCTCCTTGACTGAGCAAATTCCTTCATTTT
CACACGGTTTTGAAGTGCAAGGGTTGGTCTTCGTTTCACAATTCTTCCCT
TGCCATCCGACTAAGCAGGTGCAGCTATATCCTTGACTTGTTTCTTGACA
TATTCCTTGGTTTTTACAAGGGCTTGGTTTACAACTATTGACGTTCACCT
CACAATTCTTTCCTTTAAATCCAGCTGGACATTGGCAAGTATAATCATTG
ATGCCATCAACACAAACTCCTTTGTTTTGGCAAGGAGATGATTGACATTC
GTTGACATCGGTTTCACAATTCTTTCCTTTGAATCCAGGTTGACATTTGC
ATGTATAATCATTGATACCATCAACACAAACTCCTTTGTTTTGGCAAGGA
GATGATTGACATTCGTTGACATCGGTTTCACAATTCTTTCCTTTGAATCC
AGGTTGACATTTGCATGTATAATCATTGATACCATCAACACAAACTCCTT
TGTTTTTGCAAGGAGATGATTGACATTCGTTGACATCAGTTTCACAATTC
TTTCCTTTGAATCCAGGTTGACATTTGCATGTATAATCATTGATACCATC
AACACAAACTCCGTTGTTTTGGCAAGGAGATGATTGACATTCGTTGACAT
TGGTTTCACATCTCTTTCCTTTGAATCCAGGTTGACATTTGCATGTATAA
TCATTGATACCATCAACACAAACTCCGTTGTTTTTGCAAGGAGATGATTG
ACATTCGTTGACATTGGTTTCACAATTCTTTCCAGTGAATCCTGGTTGAC
ATTTGCAAGTATAATCATTGATACCATCAACGCAAGCTCCGTTGTTTTGG
CATGGAGATGATTGACATTCGTTGAAATTAGTCTCACAATTATTTCCTTT
GAATCCAGGTCGACATTTGCATGTGTAATCATTGATACCATCAACACAAA
CTCCATTGTTTTGACAAGGAGATGATTGACATTCATTGACATTGGTTTCA
CAATTCTTTCCTTTGAATCCAGGTTGACATTTGCATATATAATCATTGAT
ACCATCAACACAAACTCCGTTGTTTTGGCAAGTAGTTGATTGACATTCAT
TGACATTGGTTTCACAATTCTTTCCTGTGAATCCAGGTTGACATTTGCAA
GTATAATCATTGATACCATCAACACAAACTCTGTTATTTTGGCAAGGAGA
TGATTGACATTCGTTGACATTGGTTTCACAATTCCTTCCAGTCCAACCCT
TAGGGCATTGGCAATAATATGAGCTAACTCTGTTCATACAAGCACCCCCA
TTTCGACAAGGTGATCTCAAGCATTCATTAATATCCACACAGGTTG
Run BLAST on NCBI

transcript from alignment at scaffold_242:956435..967592-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054372 ID=TCONS_00054372|Name=TCONS_00054372|organism=Clytia hemisphaerica|type=transcript|length=11158bp|location=Sequence derived from alignment at scaffold_242:956435..967592- (Clytia hemisphaerica)
TTCCCTTCCATCCGGGTCGACAGAAACATCGATAATCATTCAACAAATCT
TGACAAGTGAATGCATTGATACATGGTGATGAAGCACATTCGTTTTTGTT
GTATTGACATCTTTTACCTTCCCATCCTGGTTTGCAAACACAAGTGTAAT
CATTTTTACCATCTATACATTGAAATGCATTCACACAAGGTGACGAATCG
CACTCGTTCCTCTCAACTTCACAGTTTTGACCAGACCAACCATCTTTGCA
TTGACAGAAATAAGTATTGTTCTCCTTGACTGAGCAAATTCCTTCATTTT
CACACGGTTTTGAAGTGCAAGGGTTGGTCTTCGTTTCACAATTCTTCCCT
TGCCATCCGACTAAGCAGGTGCAGCTGTATCCTTGACTTGTTTCTTTACA
GATACCTTGATTTTTACAAGGATTTGTTTGACATTTGATGACATTGGTTT
CACAATTCTTTCCTGTGAATCCAGGTTGACATTTGCAAGTATAATCATTG
ATACCATCAACACAAACTCCGTTGTTTTGGCAAAGAGATGGTTGACATTC
GTTGACATTGGTTTCACAATTTTTTCCTGTGAATCCAGGTTGACATTTGC
AAGTATAATCATTGATACCATCAACACAAACTCCATTGTTTTGACAAAGA
GATGGTTGACATTCGTTGACATTGGTTTCACAATTCTTTCCTGTGAATCC
AGGTTGACATTTGCAAGTATAATCATTGATACCATCAACACAAACTCCAT
TGTTTTGGCAAAGAGATGGTTGACATTCGTCGACATTGGTTTCACAATTC
TTTCCTGTGAATCCAGGTTGACATTTGCAAGTATAATCATTGATACCATC
AACACAAACTCCATTGTTTTGGCAAAGAGATGATTGACATTCGTTGAAAT
TGGTCTCACAATTCTTTCCTGTGAATCCAGGTTGACATTTGCAAGTATAA
TCATTGATACCATCAACACAAACTCCATTGTTTTGGCAAGGAGATGGTTG
ACATTCGTTGACATTGGCTTCACAATTCTTTCCTGTGAATCCAGGTTGAC
ATTTGCAAGTATAATCATTGATACCATCAACACAAACTCCATTGTTTTGG
CAAGGAGATGGTTGACATTCGTTGACATTGGCTTCACAATTCTTTCCTGT
GAATCCAGGTTGACATTTGCAAGTATAATCATTGATACCATCAACACAAA
CTCCGTTGTTTTGGCAAAGAGATGGATGACATTCGTTGACATTGGTTTCA
CAATTCTTTCCTGTGAATCCAGGTTGACATTTGCAAGTATAATCATTGAT
ACCATCAACACAAACTCCATTGTTTTGACAAGGAGATGATTGACATTCGT
TGACATTGGTTTCACAATTCTTTCCTTTGAATCCAGGTCGACATTTGCAT
GTATAATCATTTATACCATCAACACAAACTCCATTGTTTTGGCAAGGAGA
TGATTGACATTCGTTGACATTGGTTTCACAATTCTTTCCTGTAAATCCAG
GTTGACATTTGCAAGTATAATCATTGATACCATCAACACAAACTCCGTTG
TTTTGGCAAGGAGATGATTGACATTCGTCGACATTGGTTTCACAATTCTT
TCCTTTGAATCCAGGCTGGCATTTGCAAGTATAATCATTGATACCATCAA
CACAAACTCCTTTGTTTTTGCAAGGAGTTGATTGACATTCGTTGACATTT
GTGTCACAATTATTTCCTGTGAATCCAGGTTGACATTTGCAAGTATAATC
ATTGATACCATCAACACAAACTCCATTGTTTTGGCAAGGAGATGGTTGAC
ATTCGTTGACATTGGTTTCACAATCCTTTCCTTTGAATCCAGTTTGACAT
TTGCATGTATAATCATTGATGCCATCAACACAAACTCCGTTGTTTTGGCA
AGGAGAAGAGTGACATTCGTTGACATTGGTTTCACAATTCTTTCCTTTGA
ATCCAGGTTGACATTTGCAAGTAAAAGAACCTTCTGTGTTGTGACATTCT
GCACCATTTTTACAGAGGTTTGCTTTCTTGCATTCGTCAATATCTCTACA
TACCTTTCTCCAGTCCGGCTCTAAAAAATTTATATTTGAATTGTATGTAG
TCACCTTTTTTTGAAACGTGGAATAAGAAGAAAGCAATACAATGGTACGT
GAGCATGCGAAAGCCCATTCTCAATAGTTTAAGGTACTATTAGATAATTT
AAACACTGAAGTTTTTGAGAAAAAAAATTTTATTTAGAAATTATAATGAA
AAGGAAAAAAATGAAAACAATATTCAGAAATCTCAATAATAATATTATTT
GCTGGTTTTCATTATACCAATTTCAAATCTTAAATCTATGCTGAAGATGA
GAAAAAAGGTTTCGCAGACAAAATCCCGGATTACTCAATAATATTGCCTG
GTGTTTAGGGAAATTCATGTTGCGTGTGTAGAAGCTTAGTGACACAGTAT
TGAGGAGAGAGGACCGGGGGCGGTCACTGATCTTGACGGCTGTGTCGGAC
GGGACGTGCTGCTGGAGTTTGAAAAGTTAATTCGGGACCCTTTCAGAAAG
AAAAATCGAAAAAATTTCCTATTTTCTGAAAGTGGCCAAAATAACTAAAA
GTAAACGGAAAGTTTGAAATTTCTAATTTCTACCATAATTTGTTAGATAT
CTTCAGAGCCTAAATAAGAGACCCTGAAAAGCGACACGTCTCTCTACTCA
ATTTTGCCTGAGTGCCCCCCTCCCTGAGGAAGAGGACTTTTTGAAAAGTC
AACGGACATTTTGCCCCGGAATTGAACCTTTTTCTATAGAGCAGATTGAA
AATTAGACTTACGGTATCCGCTTCTGCATTTGCATTTTTCAGTATTTCGA
TCACAATATTTTCCAGTGAGGGCCGGAAAACACCAAATTAAAGGGCACCA
TTGCTTCTCTGTTAATCTCTCATCACAATATGTTCCAGGGTCGACAATGA
TTCTTGATCTTGATCGTTCTACTGGTCGTAAACACGAGCAAGATGACCAT
GAACTCCAGGCTTAAAAGTTCGTAAAAAAGATAAACGATTCAGTCAGGCA
GGGTATATAACACACTACAATTACTATATCACTTTTTGTCCTTTTTGTAG
ATCTAGATTTAGAACGCCATATTTCCGCATCAGTTTTTACTGCCTTTTAT
TGTATATAGTTTTGTATATAGAATCTGACCTGTGTTTACAAAAATGTTTT
TTGCAATGGCCTCACGGACTTATGTTCTTCTTTGTTACTAGGTCCTAAAG
GTTTTGTTTTTAAATATGAGTGATATCGTTTGCTTACTCATTACAAGCTT
TTTCAAATAGAATTGACACGGATGTGGAACAAGGTTGGCCAGAAAGAGGA
AAAGAAAAACATTTTTTGTTTATTCAGCACAATTATAACAATAAATAGAC
AACATCCTGATAGGAAACATGTGTCTTATGGGAAAATAAAATCTGTAAAG
GAAAATTTTTTTGAACCCCACTTCGAACGACGGAAATCTCGATTAACCAA
CAAAGTTTCTACTTGTGATGAACAAGCAATAAAAATATCTTTTTTATGAT
AATCGAAATTCAAAATATGTGGGGCGCGATTACCTGAAAGTCTACATGTT
CATTTTAGCTAAACTATGACCAAAAAAAAAATTGTAGAGAACTTATACCT
GATAACACACATTTCTTTCCGTGTGAACCCCTTCTACTGCTTCGCCTACT
CCGCCTACTGCTTCGCCTACTTCTTCTGCTGCTTCCATCAATGGTGTACA
GAAACACTGACAAAACCAAAAATATCACAAAAATCTTTGATAATTTCATA
CTTTATTCGTAGCTTCGTAAGTCATAAGAAATGTCACTTCTTTGCTTCAA
ACGTTATAATGAATTTCTGCAGAAGCTTTATGATTAGAACCTTACCCTAA
TATTAACATTTTTCAATGTTTGCACTTTCGAATATTGTTACAACAATTTA
CTAACAGCTTTTCAAACAATGTTAAATATTACTCTAATAATTTTAATTTT
TTTTTATTCTTGAAAATTTTCACCAGTGATAGATATTGACCATTTAAGAC
AGTGTGCAAAGTTTCAATTTAGTCGCGTAGGTGGTTGGTATTTTACAGAC
CGGTCCGTTTTTTACCTAAAGTGCTCACTTTCAGCATAACCACTCATCAG
ATTTTGCTGAAATTTTTGCTGTAAGCTTGTATCATCAATATCTAACACTT
GATAAAATTTCAAGTCAATAGCATTTTCAAATCACTAGATACAGTATGCT
AGGGCTGTTTAGCCAAAAAATGGCAATTTTGGGCCGGTCTGTAAAATACA
CTATACCAACAGGGGGCAAAAGATTTACCCTCTGCCCTAAAAAAACATGT
CACGTGGAGCTGCCTTAAAAGATTTGAGCAAAAAAAATTATTGTGAAAAA
AAAATGACAATTCATATTTGATGCACACTTTCAAAATTTCAAGTCAATTA
AATAAAAAAATTGCTGAAAAAAAAAAAAATAAATGGCTGATTTAAACCTA
ATTGAATAAAGATTTCAAAAGTTATCGAAAATTTTCTATATTTTTTGGGA
GGGGGGGGGCAACTCCCCAAGATGCTCGAAGGGTTAGTTTTGATTTCGAG
AGAAAAACTTGTAAAAAAAAGTCTCTCTAGGGGTAAGACATTGTTTCAAA
TCTCAGTATATATTAAATCATAGTAGTTTAGAGGTCCTTGTAATTTATCA
TTTTTATGATGTAAGAAAATTCACCGTGACTGGATAATTAAGGCTCCAAA
CGTCTATAAGTAATTTCTTCAATGAAACTTTGAAGTGTTCAAGAAATAAC
TAGTTTGGATAAATCAATCCTGTCTAATTTCTTAAAGTCCGTTAATTAGA
GAGGAAAAAGTAGGGTTTTGACCATTTCGTGCAAAAATCTTTGTCCGCTA
ATTACAGTGTCTGCTAATTGAGTGTCCGCCTTTAGGAAAATTTTTTATGA
GGATTTGACTAGGAAATGACTGGGGAAAATAGAATTGTCCGCTAATCAGA
GGTGTCCGCCTTTTAGAGTGTCCGTTAATTGGAGGTTTTACTGTATTCTA
ATCGAAAGCTCTCAAAAAACGATATAGGGGACTTTTAAGTGAAACAAAGT
TGTTTCTCAACGTAACTCTAGTAAATCGACCGAAAATGACGTACCTTAAG
GGCAGGAATTTTGGCGGGAACTTAATTGGCGGATTTAATTTTTTCCGTCA
CCCGCCAAATTAAATTCCTGCCAAATTTAAATGGCTCTATTTATTCCCCC
GAATGTGTGTTATTTCAGGTTTTAAAACAGGTTTTTACTTTTTTAATGGT
GTTTTTGGAAAAAAATGTCCTTCATTCGCCAAATTGAATTCCCGCCAAAA
TCTCTTCCTTTAAGAATTTTGACATTAATTTTCTCGAGAAATCGACTATA
TCTATCGACTATTTATGCCCCCTACTATTAGAAATGATCAGCAATTTTGA
TTAAATTTGACAAAACTTTATATTGATTTATAACTTTCACAAAATATTAT
ACAAAACTTTATATTGATTTATAACTTTCACAAAATATTATATAACAATG
TGTAAGTTCTTCTTCTCAGCATACACCAGATGAACAAGCTGAAATTTGGA
AAAACAAAAAAGAAACATTCAATTAATACAATCTATACACGGAAATTTGA
AATTTATACAATACTATTTTCTGAAACACTATTCCCGACAATATTTCGAA
TATTTCCAGGCCTATTCCCCGATAGAGAGAACTTCAACTCCAAAATTATT
GCTGTTAAAATGGGTAAAAGTAATCAGATCCCGGGAGGGGGGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCGTCGCCCAACCATGGTGGGCGACATATTTTTTT
TGGCCCCCTCAATTCGATTCAAACGCCGGAGGCCATGCAAGAGTCCCCGA
TAGGATTGCAAAAACAACAAAATAGAAAAACCAGTCCCTCTCGGGGTACC
TTTTTGGAGGAATTTGGATAAACACACACACCCGTAGGTCGGCAAGGGTA
GTACCCCCCACCCACCGGGAATCAGATACACGTGATTTAGTTGTTCGAAC
ATAAATACACGGTCTTGGTGAAAATCACACAGTCTACGTGAAGTAATGTG
AGGACAATATAGAAGTGTTTAGTGGTTGAGTTGACGTAGGTATACACCCC
CTTCTCACAGACCCACTGCGAACCCTTCCCACTGGAAAAAGTGGCCAAAA
TATCGTCCCCGATGTAAAACTATACTCTAATTTTTGTTCCCGCTGAAAAT
AATCGGATAAGCAAATCCTCACTGCAAAATATTGTGGTTTTTTTCTATCC
TCACTGAATTTTCTGGCTAGAAAACAATGGAATTCTAATCCCCAGTCTTT
AAAAACACGGGAAAATTTATCCCCATTGAGCTTTGTTCCGTTATTTTTAT
CCCCACTTCCTGATAAAATTCTGTGAGAAGGGAGTGTACGTATTTTTTTG
GATTACTGTATGGTTTAAGTGTGACAGAAAGTTAGTAAAAAAAAGCAAAA
TTTCAGTGACGTACGTACAGCCATGGGTGGCGTGGTCGGTAAAATAATTT
AAAATATGATATATATATTTTCACGTGATATTGGCCGGAAAAAGATACAA
TGTGATTAAAAGCCTTACAAAAGCAGCTTGTCCCCAATAAGTGGTTCAAT
CCCTGGATTTAAAAGAACTGCCTTCTCAACCATCCTTTTGAGAGAATGAC
GATAGGCTTTTCCAGAAATAGTCCGTGCCCCCCCCCATGCTGAGGATATT
GGATATCTAATTTGTGTTCAAAAGTGGATATCCAGGGGGTTAATAAATGT
CAACAAGGGAGCGGATATTCAGGGGTAAAGTGTCTTTTCAAGTTGAAAAT
ACGAGATCCAGGGGGTAAGCATCTTTATAAGAGATGATATCCAGGGAGTT
CGATACTTCGAAAAATCAATATCCTCAACAGTGGGGGTAAAGTTTTTTCT
GGAAAAGCCTAATAGAACATGTGTCCAATCTTCTAATCACTAACCTTTTC
CACAGTTCAATCCATTGAAACCTTTTGGACAAACACATACGTAATCCAAT
GGACCACTCTTGTGACAAACTCCTCGAACACACGGTGACGATTTGCATGG
ATCTAGACAAAGAATGAATATCTGAAACTAAGTGAGTTTACGAGCCTAAG
GTTTTGTTTTTACATAAGTGTTTCCATTTCATATGAGACACATGTTTTAT
ACCAGGACAGTGTCTGCCTATTGTTTTACTGTGCTGATATGAGCAAAAAA
ATGTTTTTCTTTTCTCTGACCAATCTTGCTCCACATCCGTGTCAATTCAA
TATTCCAAAAAGCTTGTGACTTAAAATTGATGAGTAAGCAAACGATATCA
CTGTTATTCAAACACAAAACCTTTAAGTTAATAAAAAGCAATTGCAAAAA
AAACAAAAAAAGGTTTTTTGATATTAAGTTTTCTATTCTTGAGACATTCT
CACTCGACTCAACGCTCTTCGAAAAAATGGCTGAAAACAAATAAAAACAT
CAAATTCATGAAAATAACATCAAAATGGATAAAGATCAGCCTTTCGAAGC
AGCCTTACCCCCTCAAGCTTGCAAGCCGTCAAGATGTACTGAAGACGAAG
ACCTGGATCGCTTAACATGCAAAAAATGTAAAAGATCAGTTCATTATGAG
TGCACACAGTTACCCCTGTATCAACTACAAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTACAAATATT
CGTGACATCTTACAACGATCATTACTTATGTTCAAACTGCGTACGAATAA
CGAAAAACCTAAGAAATAAAGTGGGAAAAAACATTCAACATATGATACAA
AATGAACTTAAAAAGAAAGACGACGAACGACGAACAACGAGGTCAACACC
AACACAAAAACCCGTGATTCCATCAAAAATGACCTCAGAACCTTTCTGGC
AGGAAACTACAAGAAATGGAGGAAAAGACAAGAAGCATGATAAAGGAGGA
AATAAAGCACACAGCAGAAATAATGACGGAAACATCAAAGAAAACTTACG
CGGAGATTACCAAGAAGCAAAAAAAAGACTTGAATCTGCCGAAGAACAAA
AACGGAAGGAAGAAAGTGAAAAAAGAGACATAGAATCTAGAAAACTGAAT
ATGATCGTTCACGGGTTTCTCGAACATTCAGGCCCAGATAAGGAAGAAGA
AGAAAATGGGAAAAAATATAACATATTTCGGTTCCGAGAACTCCTAGATG
ACATCAATGTTCCTGAAATCAAGCTTACTCACCACAGATTAGGAGACAGA
AAAACAAAGAATGGGCCGTCCTCTGAAAGTCACCCTGCAGAGTCAACATG
AAAAAGATATTATCATGAAGACTTTACACATGCTAAAAGAAACTTGTTTT
TTCAGGTAAGTATAACGGAAGATTTCACAATCAACGAACGGAAAAAGATC
AAGGAGATAAATAACAATAAAGGATTCAACTGGCGCATAAGAGGAAGCCC
AAGAACAAAACTACGCATCGTTAAGAAATTAAAAAACCGAACAAAAATCT
TCAAATTATAAACCAAAATGCTCTACGGAAGAAATCGTCAGCGATTGGGC
ATTAACAGATGATGATGAATGATTCATTTTGTAAAATAGGCAGTCAAACT
CTATTAGCTTTAAAGCTAGTACAGATTTGTACACATTTTTCGACTTTAAA
GAATATATACATTAACATTAACATTAACCGAAATGTTTAGCTCAGCTTCT
ATTAATGATGAAGGTGTGAAGATCAAAAAGTTACAAAAAGAACATTTCAC
TATTTAACGCAGCATTTGGGAGATTACTTAGATTTTGAGCATTCCTCGCC
TTTTTCGAATTCGCAATATCTCCCTCGATAGCCTTTATCACAAAAACATT
CAACATATCCACCGGCTTTGGTTAGGCATCTGCCATTACCAGAACAAGTA
TTTGGCGTACAAGAAGCTTTTTTCTCACAATGTCGACCAATCCAGCTATT
AGGACACATACAACGATAGCCAGAGCCAATAGCATGACAAGAACCATTAT
TTTGACATTGATTTTTAAAGCATGGATCGATATTAACGTCGCAGTTCTTT
CCCTTCCATCCAGGTCGACAGAAACATCGATGATCATTCAACAAATCTTG
ACAAGTAAATGCATTGACACACGGTGATGAAGCACATTCGTTTTTGTTGT
ATTGACACCTTTTGCCTTCCCATCCTGGTTTGCAAACACAAGTGTAATCA
TTTTTACCATCGATACATTGAAACGCATTCACGCAAGGTGACGAATCGCA
CTCGTTTCTCTCAACTTTACAATTTTGACCAGACCAACCATCTTTGCATT
GACAGAAATAAATATTGTTCTCTTTGACCGAACAGATCCCATCATTTTCA
CATGGTTTCGAAGTGCAAGGGTTAATCTTCGTTTCACAATTCTTCCCTTG
CCATCCGACTAAGCAGGTGCAGCTATATCCTTGACTTGTTTCTTGACATA
TTCCTTGGTTTTTACAAGGGCTTGGTTTACAACTATTGACGTTCACCTCA
CAATTCTTTCCTTTAAATCCAGCTGGACATTAGCAAGTATAATCATTGAT
GCCATCAACACAAACTCCTTTGTTTTGGCAAGGAGATGATTGACATTCGT
TGACATCGGTTTCACAATTCTTTCCTTTAAATCCAGCTGGACATTGGCAA
GTATAATCATTGATGCCATCAACACAAACTCCTTTGTTTTGGCAAGGAGA
TGATTGACATTCGTTGACATCGGTTTCACAATTCTTTCCTTTGAATCCAG
GTTGACATTTGCATGTATAATCATTGATACCATCAACACAAACTCCTTTG
TTTTGGCAAGGAGATGATTGACATTCGTTGACATCGGTTTCACAATTCTT
TCCTTTGAATCCAGGTTGACATTTGCATGTATAATCATTGATACCATCAA
CACAAACTCCTTTGTTTTTGCAAGGAGATGATTGACATTCGTTGACATCA
GTTTCACAATTCTTTCCTTTGAATCCAGGTTGACATTTGCATGTATAATC
ATTGATACCATCAACACAAACTCCGTTGTTTTGGCAAGGAGATGATTGAC
ATTCGTTGACATTGGTTTCACATCTCTTTCCTTTGAATCCAGGTTGACAT
TTGCATGTATAATCATTGATACCATCAACACAAACTCCGTTGTTTTTGCA
AGGAGATGATTGACATTCGTTGACATTGGTTTCACAATTCTTTCCAGTGA
ATCCTGGTTGACATTTGCAAGTATAATCATTGATACCATCAACGCAAGCT
CCGTTGTTTTGGCATGGAGATGATTGACATTCGTTGAAATTAGTCTCACA
ATTATTTCCTTTGAATCCAGGTCGACATTTGCATGTGTAATCATTGATAC
CATCAACACAAACTCCATTGTTTTGACAAGGAGATGATTGACATTCATTG
ACATTGGTTTCACAATTCTTTCCTTTGAATCCAGGTTGACATTTGCATAT
ATAATCATTGATACCATCAACACAAACTCCGTTGTTTTGGCAAGTAGTTG
ATTGACATTCATTGACATTGGTTTCACAATTCTTTCCTGTGAATCCAGGT
TGACATTTGCAAGTATAATCATTGATACCATCAACACAAACTCTGTTATT
TTGGCAAGGAGATGATTGACATTCGTTGACATTGGTTTCACAATTCCTTC
CAGTCCAACCCTTAGGGCATTGGCAATAATATGAGCTAACTCTGTTCATA
CAAGCACCCCCATTTCGACAAGGTGATCTCAAGCATTCATTAATATCCAC
ACAGGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034280XLOC_034280Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054372-exon-scaffold_242-1575043694:967225..967592TCONS_00054372-exon-scaffold_242-1575043694:967225..967592Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1575043694:957665..957776TCONS_00054372-exon-scaffold_242-1575043694:957665..957776Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1575043694:956435..957550TCONS_00054372-exon-scaffold_242-1575043694:956435..957550Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1510915933:967225..967592TCONS_00054372-exon-scaffold_242-1510915933:967225..967592Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1510915933:957665..957776TCONS_00054372-exon-scaffold_242-1510915933:957665..957776Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1510915933:956435..957550TCONS_00054372-exon-scaffold_242-1510915933:956435..957550Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1491911889:967225..967592TCONS_00054372-exon-scaffold_242-1491911889:967225..967592Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1491911889:957665..957776TCONS_00054372-exon-scaffold_242-1491911889:957665..957776Clytia hemisphaericaexon
TCONS_00054372-exon-scaffold_242-1491911889:956435..957550TCONS_00054372-exon-scaffold_242-1491911889:956435..957550Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:956435..967592 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.283963	0.0887111	0	0.04307	0	0	0	0.0995663	0	0.0395682	0.00779749	0	0	0.174799	0	0.00315138	1.51625	1.47209	3.33159	2.16289	1.08596	1.76279	0.311899	0.490704	0	0	0	0
Blast
[Close]
BLAST of TCONS_00054372 vs. Swiss-Prot (Human)
Match: NOTC2 (Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3)

HSP 1 Score: 480.33 bits (1235), Expect = 7.620e-151
Identity = 241/531 (45.39%), Postives = 339/531 (63.84%), Query Frame = -3 
Query:    2 VDINECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCEVNVNSCKPSPCKNQGICQETS--QGYSCTCLVGWQGKNCETKTNPCTSKPCENEGICSVKENNTYFCQCKDGWSGQNCEVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCINAFTCQDLLNDYRCFCRPGWKG 1588
            +DINEC   PC+N   C++++  + C C  G+ G +CE  +NECQS+PC NN  CVD +N + C C PGFTG  C+ ++++C ST C N   C+D  N Y C+C  GF G  CE N++ C   PC ++G C DGI+ YTC C PG+ G  C    +EC SSPC N+G C+D +N Y C CQPG +G NCE N ++C S+PC  +G+C+DGIN Y+C C PGF G+RC  +++EC S+PC+    C++G+N + C C  G    +C + VNEC S+PC + G C  G++ Y C C  G+ G NCE D NEC S+PCQN G C + +N Y C C+ GFKG NC+ +++EC S+PC N+G C D I+ YTC C   + GKNC+  +  C P+PC+N  +C+E+   + Y+C C  GWQG+ C    + C SKPC N G+C      +Y C+C  G+SG +CE + ++C ++PC N   C+DG N ++C+C PG+ G +CQ + NEC S PC N  TC D +N Y C C+ G+ G
Sbjct:  455 MDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPC-HHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCI-HGICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIH-GNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCH-NTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDG 981

HSP 2 Score: 469.929 bits (1208), Expect = 3.835e-147
Identity = 243/541 (44.92%), Postives = 328/541 (60.63%), Query Frame = -3 
Query:    2 VDINECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGIN--DYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKTNPC----------TSKPCENEGICSVKENNTYFCQCKDGWSGQNCEVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCINAFTCQDLLNDYRCFCRPGWKG 1588
            +DI+EC  +PCR G  C+N V+ + C CP+G    +C + VNEC S+PC +   C  G++ Y C C  G+ G NCE + NEC S  CQN G C + +N Y C C+ GFKG NC+ N++EC S+PC N G C D I+ YTC C   + G NC+T    C  +PC+N   C +  N   YTC C PG+ G+ C  +++EC S PC N+G+C +    Y C+C PGF G  CE ++++C ++PCQN G C+DG+N ++C C PGF G  C+TD+NEC S PCKN G C D +N YTCKCQ GF G +CE ++NEC  S C N G CVDGIN ++C C  GF G  C  ++NEC S PC N+G CVDG+  Y C CP G+ GKNC+  VN C  SPCKN+G C +      C C  GW G  C+     C              C++ G+C +   NT++CQC  G++G  CE + +EC S+PC +   C D    Y C C PG++G  C+Y  +EC + PC N  TC DL+N ++C C PG +G
Sbjct:  681 IDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGN-CTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVC-INAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRG 1219

HSP 3 Score: 439.884 bits (1130), Expect = 1.452e-136
Identity = 243/585 (41.54%), Postives = 332/585 (56.75%), Query Frame = -3 
Query:    2 VDINECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGIN--DYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKG------------------------------------------------VCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKTNPCTSKP-CENEGICSVKENNTYFCQCKDGWSGQNCEVERNECDSSPCVN--AFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCINAFTC---QDLLNDYRCFCRPGWKG 1588
            VD NECL +PC+NGG C N V+ Y C C KG+ G NC+ N++EC S+PC N   C D I+ YTC C   +TGKNC+T +  C    C+N  VC +  N   Y C C PG++G+ C  +++EC S PC N+G+C +    Y C+C PGF G +CE + ++C ++PCQN G+C+DG+N ++C C PGFTG  C+T++NEC S PCKN G C D +N YTCKCQ GF G  CE N+NEC  S C N G CVDGIN ++C C  GF G  C  ++NEC S PC N+G CVDG+  Y C C  G+ GKNC+T VN C  SPC+NKG                                                VC++  N + C+C  G+ G  CE  ++EC S+PCQ+   C D I  Y C+C  G++G NCE  V+ C+  PC+N G C +    + C+C  G +G  CE   + C   P C N G C +     Y C+C  G++G+ CE + NEC S+PC +  +  CI   NDY CVC+  + G+ C+   + C   PC+N  TC    ++ + + C C PG+ G
Sbjct:  756 VDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQC-MDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSG 1339

HSP 4 Score: 406.757 bits (1044), Expect = 6.756e-125
Identity = 225/535 (42.06%), Postives = 317/535 (59.25%), Query Frame = -3 
Query:   11 VDINEC-LRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVD-GINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSP--CQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVC-VDGIN-DYTCKCQPGFKGKRCETNVNECQ---SSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKTNPCTSKPCENEGICSVKENNTYFCQCKDGWSGQNCEVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCINAFTCQDLLNDYRCFCRPG 1588
             D+NEC +   C++GG C+N   SY CQCP+G+TG+ C++    C  SPC N   C   G   + C C PGF G  CE N+++C +  CQN GVCVDG+N Y C+C P + G+ C  +V+EC   P  CQN G C +    Y C C  G+ G++C  N ++C  + C     C+D +  ++C C  G  G  C  + + C S+PC    +C  + +N  Y C C  G+KG  C  +V+EC    S+PC++ G CV+    + C+C  G+ G  CE D+NEC S PC+N   C+D I  +TC C PGFKG +CE ++NECQS+PC N G CVD +N + C C PGF G  C+ D+++C S+PC N   C+D  N Y CQC  GF G  CE N+++C P PC + G CQ+    Y+C C  G+ G  C  + + C S PC N+G C +   N Y C C+ G SG NCE+  ++C S+PC++   C+DG N Y+CVC PG+ G+RC  + +ECAS+PC    TC + +N +RC C  G
Sbjct:  181 TDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLD-DACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPC-HHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRC-IDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGI-CMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEG 711

HSP 5 Score: 375.555 bits (963), Expect = 4.162e-114
Identity = 222/574 (38.68%), Postives = 305/574 (53.14%), Query Frame = -3 
Query:    2 LRSPCRNGGAC-MNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQST-TCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVD-GINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSP--CKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGI---------------------------------------NDYTCKCQPGFKGKNCETDVNECQ---SSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKTNPCTSKPCEN----EGICSVKENNTYFCQCKDGWSGQNCEVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCINAFTCQDLLNDYRCFCRPGWKG 1570
            +  PC NGG C M    +Y C C  G+TG+ C+   + C S PC N   C    N ++CKC  GFTG+ CET+VNEC     CQ+ G C++    Y C+C  GF G+ C++    C  SPC N G C   G   + C C PGF+G+ CE N ++C +  CQN G CVDG+N Y C+C P +TG+ C  +V+EC   P  C+N G C +    Y C C  G+ G  C  N+++C  + C     C+D +                                         Y C C  G+KG +C  DV+EC    S+PC++ G CV+    + C+C  G+ G  CE D+NEC S PCQN   C+D I  +TC C PGFKG +CE ++NECQS+PC N G CVD +N + C CP GF G  C+++++ C  +PC N   C +   GY C C  G+ G  CE   + C   PC +    +GI      ++Y C C  G+ G  C  + +EC SSPC+N  +CID  N Y C C+PG  G  C+ N ++CAS+PCI+   C D +N Y C C PG+ G
Sbjct:  111 VSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQW-TDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGI------DSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGI-CMDGINRYSCVCSPGFTG 676

HSP 6 Score: 350.903 bits (899), Expect = 1.675e-105
Identity = 208/552 (37.68%), Postives = 286/552 (51.81%), Query Frame = -3 
Query:  215 DINECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPC------------------------------------------------QNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSP-CKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGV--CVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGIN---DYTCQCPAGFKGKNCE--------------VNVNS---------------CKPSPCKNQGICQETSQG--YSCTCLVGWQGKNCETKTNPCTSKPC----------ENEGICSVKENNTYFCQCKDGWSGQNCEV 1585
            DI++CL +PC+NGG+CM+ V+++ C C  G+TG  C+T++NEC S PC+N   C D +N YTCKCQ GF G +CE N+NEC  ++C N G CVDGIN + C C  GF G  C   +NEC S PC N G CVDG+  Y C C  G+ G NC+T  N C  SPC                                                Q++G C++  N + C+C  G+TG  CE  ++EC S+PC++   C D I  Y C+C PG++G  CE  V+ECQ+ PCQN G C+D +N + C C PG +G  CE ++++C   P C N G C+D I  Y+C+C PGF G+ CE D+NEC S+PC ++G   C+   NDY C C+  F G++CET V+ C   PC N G C    N    + C+CP GF G  C+              V+  S               C  SPC++ G C    Q   YSC C   + G  CE  T P ++ P             +G+C  +  N++ CQ    W G +C +
Sbjct:  911 DIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCGQVKCRKGEQCVHTASGPRCFCPSPRDCESGCASSPCQHGGSCHPQRQPPYYSCQCAPPFSGSRCELYTAPPSTPPATCLSQYCADKARDGVCD-EACNSHACQ----WDGGDCSL 1457

HSP 7 Score: 332.798 bits (852), Expect = 2.648e-99
Identity = 205/535 (38.32%), Postives = 292/535 (54.58%), Query Frame = -3 
Query:    2 PCRNGGACMN-RVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCV--DGINDYTCKCQPGFTGKNCETNVNE--CQSTTCQNNGVCVDGIND-YICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQ-SSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVD-GINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSP--CKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVC-VDGIN-DYTCQCPAGFKGKNCEVNVNSCKPS---PCKNQGICQETSQGYSCTCLVGWQGKNCETKTNPCTSKPCENEGICSVKENNTYFCQCKDGWSGQNCEVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCINAFTCQDLLNDYRCFCRPGWKG 1561
            PC N G C+     + YC+CP+G+ G  C+ + + C+ + CQN   CV    +   TC+C  GFTG++C+ + +     S  C N G C     D Y C CQ GF GK C+   + C S PC N   C    N ++CKC  GF G  CET+ NEC     CQ+ G C++    Y C+C  GFTG+ C++    C  SPC N G C   G   + C C PGF+G  CE N+++C +  CQN GVCVDG+N Y C+C P + G+ C  DV+EC   P  C+N G C +    Y C C  G+ G +C  ++++C  + C     C+D +  ++C C  G  G  C  D + C S+PC    +C  + +N  Y C CP G+KG +C  +V+ C  +   PC++ G C  T   + C CL G+ G  CE   N C S PC+N+  C + +   + C C  G+ G +CE+E NEC S+PCVN  QC+D  N + C+C PG+ G  CQ + ++C+S+PC+N   C D  N Y C C  G+ G
Sbjct:   34 PCVNEGMCVTYHNGTGYCKCPEGFLGEYCQ-HRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQW-TDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLD-DACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATC-LDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTG 564
The following BLAST results are available for this feature:
BLAST of TCONS_00054372 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOTC27.620e-15145.39Neurogenic locus notch homolog protein 2 OS=Homo s... [more]
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