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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054254 ID=TCONS_00054254|Name=TCONS_00054254|organism=Clytia hemisphaerica|type=transcript|length=743bp
CCTAGGTCAAAGCTTGTTAAAAAAGACTACAAGTAAAGATTGTTCTATCA
AAAGCAACTTGGAAACAtagaatcaaaataacttttctAAACAGACGTCA
AAGCCAGACTTTTATGACAGTCGCGTCTGCTCGTCCCACTGGTAGTTACA
TATTTTGTAATAAGTTCAAATAACCTTTGAGACTCAAACTATCCCTGAAC
GTCACAATGTACCAGTATAACTAGCACGCACCATCACGATTTCTGCAGAA
CAAATGTCATTCTGAACTCGTCGACTCTACACACAGAGAGAAAGATTTTT
ACCATAACCACCCAAAGATAATGTCCTAGGTTTGCTTCGGATAGAACAAC
ACCAGTAGAAGCAAACATGCAGATTATCAAACAACATAAACAGGAATGTT
TTGGAAGTGGTACTGACCATCTTGATAAAAATTTGAGTGCAAACAATCTC
CGCTCATCACAACCGGTCGTGTCGAAAACAAATATAATGCCAATGATTCC
TCCAACTTACTTTGCAGCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAG
AAGGCATCCAAGCTGTCCCAAGTTTAGAATCAGATGGAACTGTCTCCCAA
CAACACCAAGACAGCCTTTTCTCCGAATGTGTCCTTGATTTgtctaaatc
tttaattttgatcaCACCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTC
TGGCAATTTTTTCGTGAAagatatcatcaaaaaattcccGAGG Run BLAST on NCBI protein sequence of TCONS_00054254-protein >TCONS_00054254-protein ID=TCONS_00054254-protein|Name=TCONS_00054254-protein|organism=Clytia hemisphaerica|type=polypeptide|length=116bp
MQIIKQHKQECFGSGTDHLDKNLSANNLRSSQPVVSKTNIMPMIPPTYFA
AQLQAAQRRAQEGIQAVPSLESDGTVSQQHQDSLFSECVLDLSKSLILIT
PGRGLCNISASLAIFS Run BLAST on NCBI transcript from alignment at scaffold_242:1216777..1231555+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054254 ID=TCONS_00054254|Name=TCONS_00054254|organism=Clytia hemisphaerica|type=transcript|length=14779bp|location=Sequence derived from alignment at scaffold_242:1216777..1231555+ (Clytia hemisphaerica)
CCTAGGTCAAAGCTTGTTAAAAAAGACTACAAGTAAAGATTGTTCTATCA
AAAGCAACTTGGAAACAtagaatcaaaataacttttctAAACAGACGTCA
AAGCCAGACTTTTATGACAGTCGCGTCTGCTCGTCCCACTGGTAGTTACA
TATTTTGTAATAAGTTCAAATAACCTTTGAGACTCAAACTATCCCTGAAC
GTCACAATGTACCAGTATAACTAGCACGCACCATCACGATTTCTGCAGAA
CAAATGTCATTCTGAACTCGTCGACTCTACACACAGAGAGAAAGATTTTT
ACCATAACCACCCAAAGATAATGTCCTAGGTTTGCTTCGGATAGAACAAC
ACCAGTAGAAGCAAACATGCAGATTATCAAACAACATAAACAGGTATGAT
CTTTATCTGAATGATCCGGGGGGGGTGGGCATTCGGttcaaaaacgacca
tacgtgcggcccaaaaGTAGACCTTTGAAATCGGATCCTTACAGTGAACA
GGCAAAATATAATGTGGTCAGATTTTCGAAGTTTACACCCCTTgggtgca
atttttctcatctttgctgatttcgacccttacagtacacTTTGGGAACT
TTGGAAAATATACCCctaagggccgcacgtatggtaggtcatttatcttg
agtgcccccccccacGGGAATGATCACAGGGCTCCCAGCCAACATTTTCA
CAAGTTAGTTttagtaaaaattgaaaaatcagtAAAACTAGTAAGATTAG
GACGTCTGTGATCATTTTCTCAGATGTCTGTATGCCCTTTCTAAAATGAA
TATTTCTGTTCTGGGGGTATCTGAATACCGATGCAAGAAAAAGGTTTGAT
AAATTATGTTAGTAAAGTGATTTAAAAATCAAGGATATCTAGAAAGGCAT
AGTTCCAAGTGAGGGTATCATAGAAAGGTGTCGCAGAAAAAATTCTCCTA
AACAGAATATACTTTTTATAGATACAATGTGTAAATACAGTTTACTACTT
TAAGAGCAAGTGCTACAGCAGGATAGGAGATTACTTTATTACACGAATAT
ATAACACGAATtttttcgtgttaataaaatgactagtaatattcgtgtaa
taaggtaattaCGTTCACAATGGATATAGAAATGGAATTACCAGATAGTG
AAGTGGTTGTTAGCCAGTTTACATGTTTCAAACTGTGGTCCATCGAATTT
ACCAATTTTGTATTAGCTAACGTTTTGGTTCACCTGTGTTCTCTTGGACC
AAAATTTTAATATCCGGAATTTTAATCGGGCAGGAAAGgcttattttatt
attattataaagaaTACGGTTTCAGGCCCATCACGCACATgatatcaaaa
tatgaaaaagatcaaatccATTACATTTCATGTACTAAGGGAGCTTAAAA
GTGCCTCAGGGAGTTAGGAGGATGCTGCCTCCAACAATATCCGATCTAAT
TGGCTCAATACACTATTACACTGAGAATAGATTTAAACACAGCATGTTTC
CATCCGTCCGAATGACATTGGAGTGTATTAAATTGAATGCTTTAATGAGG
TTAAGAGTTTGCTAAGCTTCATTTAATAGCTTCTTTAATTTGCAAAATAC
CTACACTAAAGGTTAGGCTTGTCATGGGagtatttgatttgaaatgtgTG
TAAAACCACACGAGGTAAAAGAAAATCtctcaaaaaaaacaattaataaa
TTAAGACTATCCCGTTCGTCTGACTACAAAATTTTGAATCATCAGAAAAT
GTCTATGCTaaataaacaagacgactttaagttgaaaatttcgccttata
tttaaactgcatgggaaaaacaagTAGTTAGAGATGGCAGCTACTGCTAC
AAAGAAAAGATTGAGAGTTTTTGGTCTTAAATTAAGTACGGGATATATTG
CTTAACACAGCCTAGATATTTACTTTATCTCACTTTCAAGAAATGCAATC
CATATACAAATTCAATAAGATTTTCATAGATGCGACTCGAGTCAGGGACT
CATTTACCAAATCTTTTTTCTCGTAAGGTTGCatcaataagaaaaaaata
catcCAACACTCGTGTTTACTTTGCACGATGGTATGTAACTATCTGTTAA
GAGTAATTTATTCAGGATAGTTAACTTGAATCCAAACGGGACGATCTTCC
CGACTCGACACCCAAACGGGAAGATAGAGAATTCTTCCTAATTCGGAAGA
TTTGCCGGTTTAGGAAGGTTCGATTTCTTCAAAACAGAAACGGGAAGCAA
GATAGAAAAATGTATGCAAAGAAACAAACTTCCCGattcagaaaaaaatc
cttttaaaattcagaaaatcgtCGCCTCAACATGAAACACTTCATTTGCC
GTTTTCCGATGAAAATATGTTTTGGGTATTTGTTAACAAGTCTTTCGTTA
TCTTTCGTCAAATTTTATCCtctgatttttgcttttttccacTTACTACC
AACTAGAAGAACAATCATTTTTCAACAGAAACAGGTAATGTTTTATGAAT
GTTCTGCAACTCTTTCGAAGGCAGGTCCCTCTCTAAAATACATTATCAAT
TTTAGAAGTGTAAATTATGACTAATTAAACTtgcttttttttggaaagga
aGAGAATAATATGcgaaaatatgcgaaaattaGATGACAAAAAAGTTGTT
TAAAGGTTTGAGAAAGATAATTGAGTGTAAATATAGCTTTATTGGTCGAA
CTTCTCAACTCAAAAATATCACAACACCTTAATTTATCTCCGTGTTATTA
CACTCGCGGCATGGGTTGTAGCATgggattcttataaagtagattcttat
aagaacaagtgatacttttatggacctacctggttatgcatttaacacat
atataattgatatctacgtgagcgtaaccattaaacaatcattcagaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNgagcaaaaaaaacatctatctcat
caaaaaattgagtaatttggctaagaacattgatgtatgcttattaatag
tgattcttaaagataaagatgcgtttttgagctgaaaaattcgtttttta
caaaaatctgcttgagccatcttttaccttctttcatgcaaaaaatcaga
aaaaatcaatgatccaatatttcacaaagtccaaaacccgttttttagcc
gttttttggcccaaatttgcccaaaaacattttttttcgaaaatcgggct
ccgtcacacaCTTTGGCcgccaccattttgcacctttgtaccaaaaatca
aaagattcctattactcaatcccgagaaaagttggtaacgaacggacgga
cggacataggttaatttatagCCCACCGGCGGGGTAGGTACAAAAATTaa
tatgctcatattatgcgccagaccttgtttactttgtaagaactaatgaC
CGAAGGGTATATTAAcctctatcaagagttattgattttattctCATAAA
ACacataaagtatatgcttaaaagaaaataagaaaataataagTGTGAAG
CTCatgacacaaagatatatgacgtgatccaaagaaaacctgcgAAAATC
TTCCGTTTGTTTTACGAACTtgtaaataatttaaaatcaGTGAGTTTAGT
GATTTTCCACCATATCAAACACTTTCCTTTTCTAAATCTAAATTTTATTC
CACACCGCCGTGAAAGGCTATcttaatactttcgctatgcaaaatttaat
aaattaaTAAACCAAAACGTATTATGTAACAGTgtgcttttgttttgttt
tcgtaGATAAACAACACTTTCTTGTATAAGATTGCTAACTCGAATATctt
aattaaaagaaaaaatcgagttagctaactcgaaaattttaaaatgagaa
aaaaaatcaagttagctaaaactcgaaaatttcgaaagattttaatttga
caaaaaaaatcgagttagctgactcgaaaattttaatttgacaaaagaAG
TTATAGGATTTTTGCTAACTCGGTTTTCTATTTCGGTTTTactaactcgg
gaattccgagCGTCCATCTGTCATGTATATAATCAGGTGTTACTGTTGAA
ATCTTATTTTAACGCAAAGAATCACCTGTGCCAAATTTTGGCCATTTATT
ACCATACAAAGTCTTGTTGCATGATTGACTTAACTAAAATGAGAACAAAC
AATCGACACATACCTCTTTTATTCTTGGTAAAAAAGCTCGATCCACAAAA
TAAGAGCCACCGCCACTATTTTTCCTCTTGTTTCCACCAAATGAAGCAGC
CTGGGTTTTTTGAGACATTATTCAACATCAAGCCCTAATAATAAGTAATG
AGAACAATTCATTCAGATTCATTTTAAGATACAATGAAACGTCTACAAGT
GTCCATTAAACCTTCCTTTTTGTGATTATTAGGAATGTGTGGCAGAGCAA
GACCCCTTTAACACCTACCTGACAATGTTACCCTCTTGTAAATATCGCTG
CCGTCAAGGCAAAAGGTCCAATATCAAAATAAGTGTccgagaaaactttt
ttttttgctttgataACATAAAATTTAGAGATGTGTTCTTTTCTCTTGTA
GATAGAACCATTCTCTACTACAAGAAAAGGCCCAATGTTACAATCTTAAG
TTAGAAAAGCCTCAATTTTCTCAGACACTAATTGGACCTTTTGCCTCGAT
GCCAGCGAATATAGTATATACATATCCCCTTTCAGAACTGGTAAATACCC
ACCCTTATCTTTTAAGGACATTATTTACCattattttaggaatttttgaG
CCTTTTGCTTTTTTCAAAGGTAAACATGGTTCCAAATGTAAATCATGCTA
GCACATTTAATTATTAGCTTGAATATCTGGGAATACATGACACGTTTTGA
AAGAAAGACAGGACAGTATCCATAGAATTAGTTCCAGCTTTTGAAATTGT
TTAATTGGAATTAGCTACTGAAAATGGATCATTTCTGtcaaaatttcggt
aaaaatgGAACAACAGGCCTGAGATTACAATaaaagaaatcagcaaaaac
tttCGGAGCTTTCTGCAAATTTAACCATTtttcgcaaaagtaaatgtctt
tgaataTTCTTGGAAgttcttgacaaaataaaaaatctgtaaaacttata
aaaaaatgaaagattttttcttgtcaaatttgcgaaaagtaaattaaatt
agCAAAAGTTTGTATGCTTGAAGTATTTGGAATAATTAGTTGAGAGAACA
TGAGGGtgttttgaataactaattactacaGCCTGCTACAGCATAAAATT
TGTTGAGGATAATGCTatataattgatttgtcttttacaacatAGCTATT
ACCTAGGGGCAAGATCATGTTCCTattttttgagatgggggtgcCCACTA
TACTATCCAAAACCTCtacatattttttaaaacaagGAGTAAGGTACTTG
AGACAACCCATCATAAAAGCTTCCATTTTGACCAATTGAATTGGATTGGT
ATACATGTATTGGATACTTATGGCTTCAGATTGATTATTATAACCAATCC
TTGGTCATAGATTCAAAAAAGCGCTTGCTTTGAGATGAAGGTCTTGTAGA
AACTTACTTTCAACATGCTAAAGCTTTTGAGATTAAGTAGTTGTAAAATA
TGGAGTCCACCCATGGAGTACTCCAGTAGAGTACCTGATGGAGTACCCAA
AAAATAATATCACAAATGTGATAATCAACCTGTTGCTCCAGCTTTAAAAG
CCAAAACTCATTTAGTTCATATAAGATTTTTATGCTCAATGGGATGCACA
GATGGCATGTTAGGCTATAAAAAGAGACCATTCAGAAAGCAAGATTCCTG
CAACCATGGTTTTACAGCAAATACAAAATTTGAGGTACATTCTGTTGTTA
TGTTTATTTCCCCTCAAATCTAATCTGCTATATTTTCttagtacacgctt
ttttataaggaatcaTAACTTAGctccgagcctggagttccttatttttc
tagAGAGTTTCATCCTAAAAGTTCCtaatcgagttccttatttacttgGC
TGCTAATATTGGATTTGCTAAGTATGTAACTACAGTTTATGCGTTCCTTT
TGTACTGTATAAATTGACATTTATTGTAAAGTGTAGCGagagtgaagaaa
aaaatttgtgtgtgttttttataagaagtcaacaagagaaaaaaatgaaa
aacgctAAAAACGCATATTGCCAAAAGCCTTGTAAATatgggcttagtta
actaggttAACAGAACCACTATAAGACTTAATGGATCTGGGACGTTATTT
TCAAAGAAGTGTTTTAGAAACAACTCGAGATACCTAATGCACACCCTAGT
GGCCGCATATCATAGAATGTAAATGTTTTATAggttttttcaaagcattt
tgaTACAGAAAAGGAGATAGGGTATGGTCAGATGGTCCTATTTGCTCCAT
AATAGACGATATAGGcttcacatgaaaactcagatttgaccccgagaatt
ccccacaatgctttgtgcggaaaaaatttcaccatgaacttttttccgcg
caaagcattgtgagCAATATttggggtcaaatctgagttttcacgttaag
ccgatattgTCTATTGAAAAACTTCGAAAAGACTTAATTTTTGCCccatt
ttgatgacatcataaaaaagaaaattttgaatagcTTCAAGTGGAGGAAa
gcttttgatttcaaattttcacaaaagGTATAAATGGATGAAGGGAAGTG
ATTCACaaaaagttttgctgacgtcagcaaatttgcaaaaatctgttttG
GCTGAAATATGCTGGACCCAGGccaaaaactttgaatttttttggtgGAT
CACTTTCCTTTATTTATTGATTTAGGCCACAATCACAAATTACTTGTGTT
CACGTAGTTTGACTGACTGATCATTTGTGTCCCTGCAAGCGATTTGGAGC
ACATTGAAAATGGGCCGATCCTTAAAAAGCCGAACTTTTGGCCGGCTTGG
ACCGTTCCTGGCCGAATTCGGCCGATGTTGACCGATCTTGGCCAATCTAG
GCCGATCTTAGCTGAGccatgtttctaaatcttttctctaAACAAAGGCC
GATCTAGACCGGTCCAATTCGGCCAAGTCCGGTCTGAAAACAAACAAGTA
ACTCTTTTTCGTATGAcggttttttgtttacaatctcGAGTGCCTAAAAA
CTTTCGAATCATTTTGTAAAGTGTTCGAATGAACTCCAGAGAacgttcaa
atgttttgaaaattgttcgatcaaattattaaaaaagttttccggatgtt
tttaaaagtctctaactctaaaatcaaaacaaaagcaaaaggaaAAGANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAACAGGGGAGATATG
TAAATGATACAGGGATCGATGTCTAAATAAACTAACGAAGGGACACAGTG
CAATTCTATTCTAAGGAGGATTTCTAACAATCTTTTCTTAATGGATTAAT
AAGAGcgagtgagtcaatgttatgaTATACAAGGGAGTATATGATTTACG
ACAAAAACGACGactgtttgaaaacaattttgcttCTAATAAGTATTTCG
GCTTCCGTAAAACATTCTGGACCGGTTCGTATCGGCCTGGACAGGTCCAT
ATCGGCCTAGACCGGTCTTACATTGGCCGAAcatcattatttttgtttta
tcaggTTTGTAATTTGACAAAACCGGACCTGGCCGTTATAGGCCGATCCA
GACCGGACCTAGCCGATCCGAACCGGACCTGGCCGATTTGGGCCGTAGAA
TTACTTGGCCGATCCTGGCCGATCTTGAAtgtgctctaaatcgcttgcag
ggacacatttttcttaattattttctgattattttgagTCTGGCTCAGGA
GGTAGCAAGATTGATGGGAATTTTATCCAATTCCATCCTTCACCCACCAT
CCTTACTTCGATCAGACGTTTCATTGTTTTACacagaaaaattcaatttc
aaaatataacgGAGGTAATATCTTGGGTGCGCAGTTGTCAAGATTTTTGG
CGCGTCACAAGGAAGACTTCACCAAAATTAAGTTCAATGCATTAGTATTT
ACTTTTAAATCATTCAaatcttttcattctttttttaaatcaatcagaaa
ttatcagggaaacaaattaaaaagaCTTCATCTGAATATctcttttcttt
ccaaagatattgatatttttcaacgtcaaggtgaaaacacgACTTAGCGC
TGACTTaccatagtgcggaaaggggtctgacccccccttcttaaatgatc
ccctaacctttaaaaatgcctatcccctaaggattttggacaaaaatagc
taacaaatatatggTGAAATATCTTAGAGAGAAAGcaaaataataaactt
ctttcttcttttcgactcagactactctaacagaaaacttcctttaatga
agaccaaatttcataacctgtgcttgaaaataatctacaatatatatgta
aAGTAAGCCCCCTTCCTTGCTAACCCcctctttttcatgaaaattccTGT
CCCCCCCTTCTTCAACTTTTCAGAAGGTGTCAttcccccttaagaaaggg
ggggggcAAACTATGCTTACTGCACTGGAAAATTCTTAACCCACATGGAA
ACAAATGTGGCTGTGCTaatgagctggttcatcttttcaatcgcagTTTT
TTCAGTAAatccagggtaagattaggctacaatccaTCATTAtgctgctt
tatttgaaaatctacaggccgtctgaaattttgaaaaataataagaaatt
gcaattttttcatGTATATAAGcagcatacaccatctgaaagctgaggtt
ttcagctttctagtgctaaaatttttttagctatcatttccagctcatta
gcaaTAATACAAAGTTTAatagtcatcgggccgattttcagactgCACCA
GCAAAACTCTGCACTCCCTGCCATGCATGGAAGGCTAGATTTCatgcttt
tgaaaaattatttcttactAAAGCCGTGCAAGCAGACATTTCTTTGGAAA
GGAGATTTTGTGTGTTTTTAATATGAAATAACTTTGgaaatacttaacca
attttgataaatgacccctcatttttctcccTAAGGTAAgggctttcaaa
taaaattagtttggtttttaaaaattgaggGGGAAATTTTGCCCTGTCCA
TCCAACCCTTTCCTATAGGTTTGTGGGGATGTGTTATCATCTCCCTAGTC
ATAAAAACAGAGATATCACATTTCAAGAAAAGAGGGGAAAATCTATAAGA
ACCACATTGACAAATGTCTACATAAACATGGCAAAATAGCGGGCAATCTA
TTTCAATTTATAAGctttgatttttgcctgaaactCGTAGTTTAAAAATC
ctctttttttacattttttttgccaGCCTGACAGACTcatttttttacct
aaaaacGACGCAAACAaagttatttgtgattgtgGCCTTACCTTACAcct
ttgatgaaaattttgaagtcaaCCAGGGTTTGAATTATAGCTTCGCACTT
CGCAAAATGCgaagtgaattttagatttagaagtaaaaaaatcataagaC
AACGCCTACTTGTCTATCCACACTtctgtttatctattgctttatctgcT
CGCTACTTTgcaactttattcactcgtttatatcttgctttatcaactcg
ctacttcgcAACTTTATTCAATAGTTTATCTATTGCcttatcaactcgct
acttcgcaactttattcacttgtttatctattgctttttaTCTACTTACT
ACTTCGTAAATTTCTTCAATAGTTTATCTcttgctttatctacttgctAC
TTCGCCACTTTCTTCacttgtttatctattgctttatcaactcgctactt
cgcaattttattcactcgtttatatcttgctttatctactcgctacTTCG
CAACTTTCTTCAATAGTTTATCTATTGCTTCATCTACCTACTACTTCaca
actttcttcattcgtttatctattgatttatcaactcgctactactttgt
tactttctttactcgtttatctattgctgtATTTACTCGCTACTTCACTA
TACTTTGCTTCGTCTACAATCACTTATTTCAAGTCTTACTTTGCTTTTCT
CGAGAAATACATTGAAGAtacttttgcatttttttccaaacaacaTTGCA
AAATGCcgccaactgctctaacttgggacgattggtctggctagttcgaa
acacgggtcacgggcacggggcatacaaattacagaccggaaaaaatata
acaatatcATGACGTAAAATTCATAACACGTACTACATAACACATAAAAT
AGTACTAGTACtactagtatagtatgtctaaaacaattatatacgaatca
ggggggggggcacgcagttactacaagacatgatgtgtagtaagtacttt
ttcaacacttttttcaggaccaccaccctttgcagttactacaccttggt
agtaactgttttcagaaaagatttccaggtaccacccctttTTTTGAGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattgcgattatttttc
aacctaaagccatttttgtgctagattttcttttaatttacttggttaac
agctgttgagaacattttaatgataattagggaaggcataatttcaaagt
tgggtctgagaaaaatttcaaattttttgtccatttataacaaaaatatt
ttttttaacaaagaattttttcacaaaaaaattcatttttggcgaaaaat
tttgaaagttcttgaaaaagaattaaaatataagcacttactacaccaaa
agtgctagtgttagtgtttggcaccacccccaaacagcagttactacact
gtgtagtaactgttttcataacttctgaatacagtaccaccacggtagta
agtgtcatactgtcttgtagtagcTGCGTGCCTCCCCCCCTGTACAAATA
agtattatcatgaaaatttttaaataacatgtcacccacaaattttgaca
aaatgatattgaatggcaaaaatattgtcaaaatcatgaaatataagcct
ctgaaccaatttacagcaaaatattttttcatactcagtatgctaatcat
gtgactggatatagattgacatgttttTAAAAACGATTAAATGCTGCAAG
CTTGTTGTTTTAGAGTATGAGTATaattatgtcatttttattaaaaattc
ataatggtaggtggaaaatattgacacatttataaaataccaCCATTTCT
Acgctaccgtaagttggtctaatgtcgacatccgtcttctaatttcgaca
tccttctttaaagataggaataataagaaggtcgaaattactgatagact
aaagatttttcctctcgccgcgctaatcaaagtcaatcagcgattccgac
cttcctcagtttctattgttcctatctctaaagaagggtgtcgaaattag
aagacggatgtcgacattagaccaacttacagtattatccattaaaatca
tattcataCTCAACCATCAAGgtgatggaggggatataatgagatatgat
ttaacaatagccttactatcattttcttgagaaagctCGGTTTTCAGGTG
AtgggaattgtaatatgtatattacttGCATATAACATATAACAAACATG
CATATAGCATTAAAAGTGTATTATTGATTAATATAACCTTATTATATGTA
tatatgtatgtaatatgttgcggtgttttctggtctgcgttgtacacgac
gcaaacttcgaaagaacattttctgtttgaattactttgattAGAGCTGC
CCCGTCACCCCGTGCCCCGTCACCTTTGTTTCAAACTAACcgcgattggt
cgaaacatgggactggttaaTATCTAGTCTGTATTTTCACTGGCTGTTAA
ATCTCTTTAAGACAACAAATTTGgtttcgtgtattttttaatacgccgtt
cattaagtcATCAAATCAAATGGTGGCCgatttgtcagatagtcccaagt
tagagcagttgacggtactaaaAATGCTTTGCAAACGGCACTCCTTTTTT
TACCTGACATCGCTCGAAAAATAGTGAAGCTccttaaatttataatttta
acCCTGTCAACAGATTTCCGTAAGTTAGGTCTAATGTGGACATCCACTCT
TCTGATtttgacatccttctttagagatagaaaTAATAGGAAGCCACCAC
CAAGCTTATTTTTTACGAACATGGCCATATTCATCAAGAGCAGCCGccgc
cggcagattttttttaaatatctgttctttttttccaggagagtaaattt
tatagataaatctaggagagactttcctccAAAACACCCAagtaaaatcc
aggggtcacCTTAAaagacatctgttcttaaaatccaggagcacatttta
aggaaaagcACATACATaattttccagcggacaatctgttcgtaaaatcc
aggagctaaattgtgaaaaacacaaccagatgccagattACAAACCTATG
TTTTAGGAGGCCATATACTGAAATACATCTAATGATTTCGAGCCTaacat
tgaaatttcaatacCTTATTCTATTATTTGTGATGCTTTGTGACTTCAAG
TGCTCAATTtctgtaaataaaaattttgtacCATGTGTTTTGAAGTGTGG
TTTCGAGCTATGGACATAATAATCGGTCGTTCAAAGTATActttttttgt
caactttttccGAAAAACTGATATAGTTTTATCAGGGGGTCTAAACGTTT
AAATAGGTATACCtactttttatttactttgacattttttaaatcaaatc
agCCATTTACATATTTAAAACATTATTTCGATtcagattttttgaatttt
tatcctCAAAACTGATCTCATCTACAAATTTGAGCTATACCAGGTTACAA
CTCTACCCCCTGAATGTACTTTCTTATGAAAAAGGGGATGTATTCTCTAG
ATTGTTTCGACAAGGGTCCTGACCAATCAGAACGCTCATTTAAACAATCG
TCGATTCTGCGTTATGCTTCGCTAATTATTTTTCTACCTAGAGTCGAACT
TTGCgatgaaaatttagcaaaagaaACAAACCTTGATTTGTGTCGTAAGC
CTCAAGACTTTACACTCAGTTTACCCTATCCTAACGGCTTTATTGCTGGA
AAAGGAACCATACAATCCTGGCAAATACTTCGGAAAGTCAGGTAAACATA
TATCCTTCTGAATATCTGGATTTTGAAAGGATTCTCagctttttgtcatt
tttgtttacctttttgtTTATGTCAATTTTTTCTTGTATCTTTTTGAAAC
ATGTAAACAAGTTTTTAGAATTATCACTTAATTCCTAGTTTTTGTAGCTG
TAATTAGTGCTTTAGATAATCTTGAGAAATTACTAGTCGATCAGCTCATA
ACTTAGATAAATTTTTCTTGGAAGATAAAAATATTGTGGCTGGCTGGAGT
TCACTACTCAAAGAAAGGAAAATCCTCTTTTGAGAATGTTCATTCAGAGC
CATCGAATCCTCTTAACAGATCATAACTTTCATCTATGTCCTGTACTCTG
CAATAAAGTCTTATGATGTCCAAAACTTTCTCATGCAGCCACACagactt
aaaaacaattttccaatttacTTTTCAAGGAATGTTTTGGAAGTGGTACT
GACCATCTTGATAAAAATTTGAGTGCAAACAATCTCCGCTCATCACAACC
GGTCGTGTCGAAAACAAATATAATGCCAATGATTCCTCCAACTTACTTTG
CAGCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAGAAGGCATCCAAGCT
GTCCCAAGTTTAGAATCAGATGGAACTGTCTCCCAACAACACCAAGACAG
CCTTTTCTCCGAATGTGTCCTTGATTTgtctaaatctttaattttgatca
CACCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTCTGGCAATTTTTTCG
TGAAagatatcatcaaaaaattcccGAGG Coding sequence (CDS) from alignment at scaffold_242:1216777..1231555+ >TCONS_00054254 ID=TCONS_00054254|Name=TCONS_00054254|organism=Clytia hemisphaerica|type=CDS|length=702bp|location=Sequence derived from alignment at scaffold_242:1216777..1231555+ (Clytia hemisphaerica)
ATGCAGATTATCAAACAACATAAACAGGAATGTTTTGGAAGTGGTACTGA
CCATCTTGATAAAAATTTGAGTGCAAACAATCTCCGCTCATCACAACCGG
TCGTGTCGAAAACAAATATAATGCCAATGATTCCTCCAACTTACTTTGCA
GCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAGAAGGCATCCAAGCTGT
CCCAAGTTTAGAATCAGATGGAACTGTCTCCCAACAACACCAAGACAGCC
TTTTCTCCGAATGTGTCCTTGATTTgtctaaatctttaattttgatcaCA
CCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTCTGGCAATTTTTTCGTG
AATGCAGATTATCAAACAACATAAACAGGAATGTTTTGGAAGTGGTACTG
ACCATCTTGATAAAAATTTGAGTGCAAACAATCTCCGCTCATCACAACCG
GTCGTGTCGAAAACAAATATAATGCCAATGATTCCTCCAACTTACTTTGC
AGCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAGAAGGCATCCAAGCTG
TCCCAAGTTTAGAATCAGATGGAACTGTCTCCCAACAACACCAAGACAGC
CTTTTCTCCGAATGTGTCCTTGATTTgtctaaatctttaattttgatcaC
ACCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTCTGGCAATTTTTTCGT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054254-exon-scaffold_242-1491911889:1216777..1217169 | TCONS_00054254-exon-scaffold_242-1491911889:1216777..1217169 | Clytia hemisphaerica | exon |
| TCONS_00054254-exon-scaffold_242-1510915933:1216777..1217169 | TCONS_00054254-exon-scaffold_242-1510915933:1216777..1217169 | Clytia hemisphaerica | exon |
| TCONS_00054254-exon-scaffold_242-1575043694:1216777..1217169 | TCONS_00054254-exon-scaffold_242-1575043694:1216777..1217169 | Clytia hemisphaerica | exon |
| TCONS_00054254-exon-scaffold_242-1491911889:1231206..1231555 | TCONS_00054254-exon-scaffold_242-1491911889:1231206..1231555 | Clytia hemisphaerica | exon |
| TCONS_00054254-exon-scaffold_242-1510915933:1231206..1231555 | TCONS_00054254-exon-scaffold_242-1510915933:1231206..1231555 | Clytia hemisphaerica | exon |
| TCONS_00054254-exon-scaffold_242-1575043694:1231206..1231555 | TCONS_00054254-exon-scaffold_242-1575043694:1231206..1231555 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_242 | supercontig | scaffold_242:1216777..1231555 + |
Blast
The following BLAST results are available for this feature:
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