TCONS_00054254 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054254
Unique NameTCONS_00054254
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054254 ID=TCONS_00054254|Name=TCONS_00054254|organism=Clytia hemisphaerica|type=transcript|length=743bp
CCTAGGTCAAAGCTTGTTAAAAAAGACTACAAGTAAAGATTGTTCTATCA
AAAGCAACTTGGAAACAtagaatcaaaataacttttctAAACAGACGTCA
AAGCCAGACTTTTATGACAGTCGCGTCTGCTCGTCCCACTGGTAGTTACA
TATTTTGTAATAAGTTCAAATAACCTTTGAGACTCAAACTATCCCTGAAC
GTCACAATGTACCAGTATAACTAGCACGCACCATCACGATTTCTGCAGAA
CAAATGTCATTCTGAACTCGTCGACTCTACACACAGAGAGAAAGATTTTT
ACCATAACCACCCAAAGATAATGTCCTAGGTTTGCTTCGGATAGAACAAC
ACCAGTAGAAGCAAACATGCAGATTATCAAACAACATAAACAGGAATGTT
TTGGAAGTGGTACTGACCATCTTGATAAAAATTTGAGTGCAAACAATCTC
CGCTCATCACAACCGGTCGTGTCGAAAACAAATATAATGCCAATGATTCC
TCCAACTTACTTTGCAGCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAG
AAGGCATCCAAGCTGTCCCAAGTTTAGAATCAGATGGAACTGTCTCCCAA
CAACACCAAGACAGCCTTTTCTCCGAATGTGTCCTTGATTTgtctaaatc
tttaattttgatcaCACCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTC
TGGCAATTTTTTCGTGAAagatatcatcaaaaaattcccGAGG
Run BLAST on NCBI

protein sequence of TCONS_00054254-protein

>TCONS_00054254-protein ID=TCONS_00054254-protein|Name=TCONS_00054254-protein|organism=Clytia hemisphaerica|type=polypeptide|length=116bp
MQIIKQHKQECFGSGTDHLDKNLSANNLRSSQPVVSKTNIMPMIPPTYFA
AQLQAAQRRAQEGIQAVPSLESDGTVSQQHQDSLFSECVLDLSKSLILIT
PGRGLCNISASLAIFS
Run BLAST on NCBI

transcript from alignment at scaffold_242:1216777..1231555+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054254 ID=TCONS_00054254|Name=TCONS_00054254|organism=Clytia hemisphaerica|type=transcript|length=14779bp|location=Sequence derived from alignment at scaffold_242:1216777..1231555+ (Clytia hemisphaerica)
CCTAGGTCAAAGCTTGTTAAAAAAGACTACAAGTAAAGATTGTTCTATCA AAAGCAACTTGGAAACAtagaatcaaaataacttttctAAACAGACGTCA AAGCCAGACTTTTATGACAGTCGCGTCTGCTCGTCCCACTGGTAGTTACA TATTTTGTAATAAGTTCAAATAACCTTTGAGACTCAAACTATCCCTGAAC GTCACAATGTACCAGTATAACTAGCACGCACCATCACGATTTCTGCAGAA CAAATGTCATTCTGAACTCGTCGACTCTACACACAGAGAGAAAGATTTTT ACCATAACCACCCAAAGATAATGTCCTAGGTTTGCTTCGGATAGAACAAC ACCAGTAGAAGCAAACATGCAGATTATCAAACAACATAAACAGGTATGAT CTTTATCTGAATGATCCGGGGGGGGTGGGCATTCGGttcaaaaacgacca tacgtgcggcccaaaaGTAGACCTTTGAAATCGGATCCTTACAGTGAACA GGCAAAATATAATGTGGTCAGATTTTCGAAGTTTACACCCCTTgggtgca atttttctcatctttgctgatttcgacccttacagtacacTTTGGGAACT TTGGAAAATATACCCctaagggccgcacgtatggtaggtcatttatcttg agtgcccccccccacGGGAATGATCACAGGGCTCCCAGCCAACATTTTCA CAAGTTAGTTttagtaaaaattgaaaaatcagtAAAACTAGTAAGATTAG GACGTCTGTGATCATTTTCTCAGATGTCTGTATGCCCTTTCTAAAATGAA TATTTCTGTTCTGGGGGTATCTGAATACCGATGCAAGAAAAAGGTTTGAT AAATTATGTTAGTAAAGTGATTTAAAAATCAAGGATATCTAGAAAGGCAT AGTTCCAAGTGAGGGTATCATAGAAAGGTGTCGCAGAAAAAATTCTCCTA AACAGAATATACTTTTTATAGATACAATGTGTAAATACAGTTTACTACTT TAAGAGCAAGTGCTACAGCAGGATAGGAGATTACTTTATTACACGAATAT ATAACACGAATtttttcgtgttaataaaatgactagtaatattcgtgtaa taaggtaattaCGTTCACAATGGATATAGAAATGGAATTACCAGATAGTG AAGTGGTTGTTAGCCAGTTTACATGTTTCAAACTGTGGTCCATCGAATTT ACCAATTTTGTATTAGCTAACGTTTTGGTTCACCTGTGTTCTCTTGGACC AAAATTTTAATATCCGGAATTTTAATCGGGCAGGAAAGgcttattttatt attattataaagaaTACGGTTTCAGGCCCATCACGCACATgatatcaaaa tatgaaaaagatcaaatccATTACATTTCATGTACTAAGGGAGCTTAAAA GTGCCTCAGGGAGTTAGGAGGATGCTGCCTCCAACAATATCCGATCTAAT TGGCTCAATACACTATTACACTGAGAATAGATTTAAACACAGCATGTTTC CATCCGTCCGAATGACATTGGAGTGTATTAAATTGAATGCTTTAATGAGG TTAAGAGTTTGCTAAGCTTCATTTAATAGCTTCTTTAATTTGCAAAATAC CTACACTAAAGGTTAGGCTTGTCATGGGagtatttgatttgaaatgtgTG TAAAACCACACGAGGTAAAAGAAAATCtctcaaaaaaaacaattaataaa TTAAGACTATCCCGTTCGTCTGACTACAAAATTTTGAATCATCAGAAAAT GTCTATGCTaaataaacaagacgactttaagttgaaaatttcgccttata tttaaactgcatgggaaaaacaagTAGTTAGAGATGGCAGCTACTGCTAC AAAGAAAAGATTGAGAGTTTTTGGTCTTAAATTAAGTACGGGATATATTG CTTAACACAGCCTAGATATTTACTTTATCTCACTTTCAAGAAATGCAATC CATATACAAATTCAATAAGATTTTCATAGATGCGACTCGAGTCAGGGACT CATTTACCAAATCTTTTTTCTCGTAAGGTTGCatcaataagaaaaaaata catcCAACACTCGTGTTTACTTTGCACGATGGTATGTAACTATCTGTTAA GAGTAATTTATTCAGGATAGTTAACTTGAATCCAAACGGGACGATCTTCC CGACTCGACACCCAAACGGGAAGATAGAGAATTCTTCCTAATTCGGAAGA TTTGCCGGTTTAGGAAGGTTCGATTTCTTCAAAACAGAAACGGGAAGCAA GATAGAAAAATGTATGCAAAGAAACAAACTTCCCGattcagaaaaaaatc cttttaaaattcagaaaatcgtCGCCTCAACATGAAACACTTCATTTGCC GTTTTCCGATGAAAATATGTTTTGGGTATTTGTTAACAAGTCTTTCGTTA TCTTTCGTCAAATTTTATCCtctgatttttgcttttttccacTTACTACC AACTAGAAGAACAATCATTTTTCAACAGAAACAGGTAATGTTTTATGAAT GTTCTGCAACTCTTTCGAAGGCAGGTCCCTCTCTAAAATACATTATCAAT TTTAGAAGTGTAAATTATGACTAATTAAACTtgcttttttttggaaagga aGAGAATAATATGcgaaaatatgcgaaaattaGATGACAAAAAAGTTGTT TAAAGGTTTGAGAAAGATAATTGAGTGTAAATATAGCTTTATTGGTCGAA CTTCTCAACTCAAAAATATCACAACACCTTAATTTATCTCCGTGTTATTA CACTCGCGGCATGGGTTGTAGCATgggattcttataaagtagattcttat aagaacaagtgatacttttatggacctacctggttatgcatttaacacat atataattgatatctacgtgagcgtaaccattaaacaatcattcagaNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNgagcaaaaaaaacatctatctcat caaaaaattgagtaatttggctaagaacattgatgtatgcttattaatag tgattcttaaagataaagatgcgtttttgagctgaaaaattcgtttttta caaaaatctgcttgagccatcttttaccttctttcatgcaaaaaatcaga aaaaatcaatgatccaatatttcacaaagtccaaaacccgttttttagcc gttttttggcccaaatttgcccaaaaacattttttttcgaaaatcgggct ccgtcacacaCTTTGGCcgccaccattttgcacctttgtaccaaaaatca aaagattcctattactcaatcccgagaaaagttggtaacgaacggacgga cggacataggttaatttatagCCCACCGGCGGGGTAGGTACAAAAATTaa tatgctcatattatgcgccagaccttgtttactttgtaagaactaatgaC CGAAGGGTATATTAAcctctatcaagagttattgattttattctCATAAA ACacataaagtatatgcttaaaagaaaataagaaaataataagTGTGAAG CTCatgacacaaagatatatgacgtgatccaaagaaaacctgcgAAAATC TTCCGTTTGTTTTACGAACTtgtaaataatttaaaatcaGTGAGTTTAGT GATTTTCCACCATATCAAACACTTTCCTTTTCTAAATCTAAATTTTATTC CACACCGCCGTGAAAGGCTATcttaatactttcgctatgcaaaatttaat aaattaaTAAACCAAAACGTATTATGTAACAGTgtgcttttgttttgttt tcgtaGATAAACAACACTTTCTTGTATAAGATTGCTAACTCGAATATctt aattaaaagaaaaaatcgagttagctaactcgaaaattttaaaatgagaa aaaaaatcaagttagctaaaactcgaaaatttcgaaagattttaatttga caaaaaaaatcgagttagctgactcgaaaattttaatttgacaaaagaAG TTATAGGATTTTTGCTAACTCGGTTTTCTATTTCGGTTTTactaactcgg gaattccgagCGTCCATCTGTCATGTATATAATCAGGTGTTACTGTTGAA ATCTTATTTTAACGCAAAGAATCACCTGTGCCAAATTTTGGCCATTTATT ACCATACAAAGTCTTGTTGCATGATTGACTTAACTAAAATGAGAACAAAC AATCGACACATACCTCTTTTATTCTTGGTAAAAAAGCTCGATCCACAAAA TAAGAGCCACCGCCACTATTTTTCCTCTTGTTTCCACCAAATGAAGCAGC CTGGGTTTTTTGAGACATTATTCAACATCAAGCCCTAATAATAAGTAATG AGAACAATTCATTCAGATTCATTTTAAGATACAATGAAACGTCTACAAGT GTCCATTAAACCTTCCTTTTTGTGATTATTAGGAATGTGTGGCAGAGCAA GACCCCTTTAACACCTACCTGACAATGTTACCCTCTTGTAAATATCGCTG CCGTCAAGGCAAAAGGTCCAATATCAAAATAAGTGTccgagaaaactttt ttttttgctttgataACATAAAATTTAGAGATGTGTTCTTTTCTCTTGTA GATAGAACCATTCTCTACTACAAGAAAAGGCCCAATGTTACAATCTTAAG TTAGAAAAGCCTCAATTTTCTCAGACACTAATTGGACCTTTTGCCTCGAT GCCAGCGAATATAGTATATACATATCCCCTTTCAGAACTGGTAAATACCC ACCCTTATCTTTTAAGGACATTATTTACCattattttaggaatttttgaG CCTTTTGCTTTTTTCAAAGGTAAACATGGTTCCAAATGTAAATCATGCTA GCACATTTAATTATTAGCTTGAATATCTGGGAATACATGACACGTTTTGA AAGAAAGACAGGACAGTATCCATAGAATTAGTTCCAGCTTTTGAAATTGT TTAATTGGAATTAGCTACTGAAAATGGATCATTTCTGtcaaaatttcggt aaaaatgGAACAACAGGCCTGAGATTACAATaaaagaaatcagcaaaaac tttCGGAGCTTTCTGCAAATTTAACCATTtttcgcaaaagtaaatgtctt tgaataTTCTTGGAAgttcttgacaaaataaaaaatctgtaaaacttata aaaaaatgaaagattttttcttgtcaaatttgcgaaaagtaaattaaatt agCAAAAGTTTGTATGCTTGAAGTATTTGGAATAATTAGTTGAGAGAACA TGAGGGtgttttgaataactaattactacaGCCTGCTACAGCATAAAATT TGTTGAGGATAATGCTatataattgatttgtcttttacaacatAGCTATT ACCTAGGGGCAAGATCATGTTCCTattttttgagatgggggtgcCCACTA TACTATCCAAAACCTCtacatattttttaaaacaagGAGTAAGGTACTTG AGACAACCCATCATAAAAGCTTCCATTTTGACCAATTGAATTGGATTGGT ATACATGTATTGGATACTTATGGCTTCAGATTGATTATTATAACCAATCC TTGGTCATAGATTCAAAAAAGCGCTTGCTTTGAGATGAAGGTCTTGTAGA AACTTACTTTCAACATGCTAAAGCTTTTGAGATTAAGTAGTTGTAAAATA TGGAGTCCACCCATGGAGTACTCCAGTAGAGTACCTGATGGAGTACCCAA AAAATAATATCACAAATGTGATAATCAACCTGTTGCTCCAGCTTTAAAAG CCAAAACTCATTTAGTTCATATAAGATTTTTATGCTCAATGGGATGCACA GATGGCATGTTAGGCTATAAAAAGAGACCATTCAGAAAGCAAGATTCCTG CAACCATGGTTTTACAGCAAATACAAAATTTGAGGTACATTCTGTTGTTA TGTTTATTTCCCCTCAAATCTAATCTGCTATATTTTCttagtacacgctt ttttataaggaatcaTAACTTAGctccgagcctggagttccttatttttc tagAGAGTTTCATCCTAAAAGTTCCtaatcgagttccttatttacttgGC TGCTAATATTGGATTTGCTAAGTATGTAACTACAGTTTATGCGTTCCTTT TGTACTGTATAAATTGACATTTATTGTAAAGTGTAGCGagagtgaagaaa aaaatttgtgtgtgttttttataagaagtcaacaagagaaaaaaatgaaa aacgctAAAAACGCATATTGCCAAAAGCCTTGTAAATatgggcttagtta actaggttAACAGAACCACTATAAGACTTAATGGATCTGGGACGTTATTT TCAAAGAAGTGTTTTAGAAACAACTCGAGATACCTAATGCACACCCTAGT GGCCGCATATCATAGAATGTAAATGTTTTATAggttttttcaaagcattt tgaTACAGAAAAGGAGATAGGGTATGGTCAGATGGTCCTATTTGCTCCAT AATAGACGATATAGGcttcacatgaaaactcagatttgaccccgagaatt ccccacaatgctttgtgcggaaaaaatttcaccatgaacttttttccgcg caaagcattgtgagCAATATttggggtcaaatctgagttttcacgttaag ccgatattgTCTATTGAAAAACTTCGAAAAGACTTAATTTTTGCCccatt ttgatgacatcataaaaaagaaaattttgaatagcTTCAAGTGGAGGAAa gcttttgatttcaaattttcacaaaagGTATAAATGGATGAAGGGAAGTG ATTCACaaaaagttttgctgacgtcagcaaatttgcaaaaatctgttttG GCTGAAATATGCTGGACCCAGGccaaaaactttgaatttttttggtgGAT CACTTTCCTTTATTTATTGATTTAGGCCACAATCACAAATTACTTGTGTT CACGTAGTTTGACTGACTGATCATTTGTGTCCCTGCAAGCGATTTGGAGC ACATTGAAAATGGGCCGATCCTTAAAAAGCCGAACTTTTGGCCGGCTTGG ACCGTTCCTGGCCGAATTCGGCCGATGTTGACCGATCTTGGCCAATCTAG GCCGATCTTAGCTGAGccatgtttctaaatcttttctctaAACAAAGGCC GATCTAGACCGGTCCAATTCGGCCAAGTCCGGTCTGAAAACAAACAAGTA ACTCTTTTTCGTATGAcggttttttgtttacaatctcGAGTGCCTAAAAA CTTTCGAATCATTTTGTAAAGTGTTCGAATGAACTCCAGAGAacgttcaa atgttttgaaaattgttcgatcaaattattaaaaaagttttccggatgtt tttaaaagtctctaactctaaaatcaaaacaaaagcaaaaggaaAAGANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAACAGGGGAGATATG TAAATGATACAGGGATCGATGTCTAAATAAACTAACGAAGGGACACAGTG CAATTCTATTCTAAGGAGGATTTCTAACAATCTTTTCTTAATGGATTAAT AAGAGcgagtgagtcaatgttatgaTATACAAGGGAGTATATGATTTACG ACAAAAACGACGactgtttgaaaacaattttgcttCTAATAAGTATTTCG GCTTCCGTAAAACATTCTGGACCGGTTCGTATCGGCCTGGACAGGTCCAT ATCGGCCTAGACCGGTCTTACATTGGCCGAAcatcattatttttgtttta tcaggTTTGTAATTTGACAAAACCGGACCTGGCCGTTATAGGCCGATCCA GACCGGACCTAGCCGATCCGAACCGGACCTGGCCGATTTGGGCCGTAGAA TTACTTGGCCGATCCTGGCCGATCTTGAAtgtgctctaaatcgcttgcag ggacacatttttcttaattattttctgattattttgagTCTGGCTCAGGA GGTAGCAAGATTGATGGGAATTTTATCCAATTCCATCCTTCACCCACCAT CCTTACTTCGATCAGACGTTTCATTGTTTTACacagaaaaattcaatttc aaaatataacgGAGGTAATATCTTGGGTGCGCAGTTGTCAAGATTTTTGG CGCGTCACAAGGAAGACTTCACCAAAATTAAGTTCAATGCATTAGTATTT ACTTTTAAATCATTCAaatcttttcattctttttttaaatcaatcagaaa ttatcagggaaacaaattaaaaagaCTTCATCTGAATATctcttttcttt ccaaagatattgatatttttcaacgtcaaggtgaaaacacgACTTAGCGC TGACTTaccatagtgcggaaaggggtctgacccccccttcttaaatgatc ccctaacctttaaaaatgcctatcccctaaggattttggacaaaaatagc taacaaatatatggTGAAATATCTTAGAGAGAAAGcaaaataataaactt ctttcttcttttcgactcagactactctaacagaaaacttcctttaatga agaccaaatttcataacctgtgcttgaaaataatctacaatatatatgta aAGTAAGCCCCCTTCCTTGCTAACCCcctctttttcatgaaaattccTGT CCCCCCCTTCTTCAACTTTTCAGAAGGTGTCAttcccccttaagaaaggg ggggggcAAACTATGCTTACTGCACTGGAAAATTCTTAACCCACATGGAA ACAAATGTGGCTGTGCTaatgagctggttcatcttttcaatcgcagTTTT TTCAGTAAatccagggtaagattaggctacaatccaTCATTAtgctgctt tatttgaaaatctacaggccgtctgaaattttgaaaaataataagaaatt gcaattttttcatGTATATAAGcagcatacaccatctgaaagctgaggtt ttcagctttctagtgctaaaatttttttagctatcatttccagctcatta gcaaTAATACAAAGTTTAatagtcatcgggccgattttcagactgCACCA GCAAAACTCTGCACTCCCTGCCATGCATGGAAGGCTAGATTTCatgcttt tgaaaaattatttcttactAAAGCCGTGCAAGCAGACATTTCTTTGGAAA GGAGATTTTGTGTGTTTTTAATATGAAATAACTTTGgaaatacttaacca attttgataaatgacccctcatttttctcccTAAGGTAAgggctttcaaa taaaattagtttggtttttaaaaattgaggGGGAAATTTTGCCCTGTCCA TCCAACCCTTTCCTATAGGTTTGTGGGGATGTGTTATCATCTCCCTAGTC ATAAAAACAGAGATATCACATTTCAAGAAAAGAGGGGAAAATCTATAAGA ACCACATTGACAAATGTCTACATAAACATGGCAAAATAGCGGGCAATCTA TTTCAATTTATAAGctttgatttttgcctgaaactCGTAGTTTAAAAATC ctctttttttacattttttttgccaGCCTGACAGACTcatttttttacct aaaaacGACGCAAACAaagttatttgtgattgtgGCCTTACCTTACAcct ttgatgaaaattttgaagtcaaCCAGGGTTTGAATTATAGCTTCGCACTT CGCAAAATGCgaagtgaattttagatttagaagtaaaaaaatcataagaC AACGCCTACTTGTCTATCCACACTtctgtttatctattgctttatctgcT CGCTACTTTgcaactttattcactcgtttatatcttgctttatcaactcg ctacttcgcAACTTTATTCAATAGTTTATCTATTGCcttatcaactcgct acttcgcaactttattcacttgtttatctattgctttttaTCTACTTACT ACTTCGTAAATTTCTTCAATAGTTTATCTcttgctttatctacttgctAC TTCGCCACTTTCTTCacttgtttatctattgctttatcaactcgctactt cgcaattttattcactcgtttatatcttgctttatctactcgctacTTCG CAACTTTCTTCAATAGTTTATCTATTGCTTCATCTACCTACTACTTCaca actttcttcattcgtttatctattgatttatcaactcgctactactttgt tactttctttactcgtttatctattgctgtATTTACTCGCTACTTCACTA TACTTTGCTTCGTCTACAATCACTTATTTCAAGTCTTACTTTGCTTTTCT CGAGAAATACATTGAAGAtacttttgcatttttttccaaacaacaTTGCA AAATGCcgccaactgctctaacttgggacgattggtctggctagttcgaa acacgggtcacgggcacggggcatacaaattacagaccggaaaaaatata acaatatcATGACGTAAAATTCATAACACGTACTACATAACACATAAAAT AGTACTAGTACtactagtatagtatgtctaaaacaattatatacgaatca ggggggggggcacgcagttactacaagacatgatgtgtagtaagtacttt ttcaacacttttttcaggaccaccaccctttgcagttactacaccttggt agtaactgttttcagaaaagatttccaggtaccacccctttTTTTGAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattgcgattatttttc aacctaaagccatttttgtgctagattttcttttaatttacttggttaac agctgttgagaacattttaatgataattagggaaggcataatttcaaagt tgggtctgagaaaaatttcaaattttttgtccatttataacaaaaatatt ttttttaacaaagaattttttcacaaaaaaattcatttttggcgaaaaat tttgaaagttcttgaaaaagaattaaaatataagcacttactacaccaaa agtgctagtgttagtgtttggcaccacccccaaacagcagttactacact gtgtagtaactgttttcataacttctgaatacagtaccaccacggtagta agtgtcatactgtcttgtagtagcTGCGTGCCTCCCCCCCTGTACAAATA agtattatcatgaaaatttttaaataacatgtcacccacaaattttgaca aaatgatattgaatggcaaaaatattgtcaaaatcatgaaatataagcct ctgaaccaatttacagcaaaatattttttcatactcagtatgctaatcat gtgactggatatagattgacatgttttTAAAAACGATTAAATGCTGCAAG CTTGTTGTTTTAGAGTATGAGTATaattatgtcatttttattaaaaattc ataatggtaggtggaaaatattgacacatttataaaataccaCCATTTCT Acgctaccgtaagttggtctaatgtcgacatccgtcttctaatttcgaca tccttctttaaagataggaataataagaaggtcgaaattactgatagact aaagatttttcctctcgccgcgctaatcaaagtcaatcagcgattccgac cttcctcagtttctattgttcctatctctaaagaagggtgtcgaaattag aagacggatgtcgacattagaccaacttacagtattatccattaaaatca tattcataCTCAACCATCAAGgtgatggaggggatataatgagatatgat ttaacaatagccttactatcattttcttgagaaagctCGGTTTTCAGGTG AtgggaattgtaatatgtatattacttGCATATAACATATAACAAACATG CATATAGCATTAAAAGTGTATTATTGATTAATATAACCTTATTATATGTA tatatgtatgtaatatgttgcggtgttttctggtctgcgttgtacacgac gcaaacttcgaaagaacattttctgtttgaattactttgattAGAGCTGC CCCGTCACCCCGTGCCCCGTCACCTTTGTTTCAAACTAACcgcgattggt cgaaacatgggactggttaaTATCTAGTCTGTATTTTCACTGGCTGTTAA ATCTCTTTAAGACAACAAATTTGgtttcgtgtattttttaatacgccgtt cattaagtcATCAAATCAAATGGTGGCCgatttgtcagatagtcccaagt tagagcagttgacggtactaaaAATGCTTTGCAAACGGCACTCCTTTTTT TACCTGACATCGCTCGAAAAATAGTGAAGCTccttaaatttataatttta acCCTGTCAACAGATTTCCGTAAGTTAGGTCTAATGTGGACATCCACTCT TCTGATtttgacatccttctttagagatagaaaTAATAGGAAGCCACCAC CAAGCTTATTTTTTACGAACATGGCCATATTCATCAAGAGCAGCCGccgc cggcagattttttttaaatatctgttctttttttccaggagagtaaattt tatagataaatctaggagagactttcctccAAAACACCCAagtaaaatcc aggggtcacCTTAAaagacatctgttcttaaaatccaggagcacatttta aggaaaagcACATACATaattttccagcggacaatctgttcgtaaaatcc aggagctaaattgtgaaaaacacaaccagatgccagattACAAACCTATG TTTTAGGAGGCCATATACTGAAATACATCTAATGATTTCGAGCCTaacat tgaaatttcaatacCTTATTCTATTATTTGTGATGCTTTGTGACTTCAAG TGCTCAATTtctgtaaataaaaattttgtacCATGTGTTTTGAAGTGTGG TTTCGAGCTATGGACATAATAATCGGTCGTTCAAAGTATActttttttgt caactttttccGAAAAACTGATATAGTTTTATCAGGGGGTCTAAACGTTT AAATAGGTATACCtactttttatttactttgacattttttaaatcaaatc agCCATTTACATATTTAAAACATTATTTCGATtcagattttttgaatttt tatcctCAAAACTGATCTCATCTACAAATTTGAGCTATACCAGGTTACAA CTCTACCCCCTGAATGTACTTTCTTATGAAAAAGGGGATGTATTCTCTAG ATTGTTTCGACAAGGGTCCTGACCAATCAGAACGCTCATTTAAACAATCG TCGATTCTGCGTTATGCTTCGCTAATTATTTTTCTACCTAGAGTCGAACT TTGCgatgaaaatttagcaaaagaaACAAACCTTGATTTGTGTCGTAAGC CTCAAGACTTTACACTCAGTTTACCCTATCCTAACGGCTTTATTGCTGGA AAAGGAACCATACAATCCTGGCAAATACTTCGGAAAGTCAGGTAAACATA TATCCTTCTGAATATCTGGATTTTGAAAGGATTCTCagctttttgtcatt tttgtttacctttttgtTTATGTCAATTTTTTCTTGTATCTTTTTGAAAC ATGTAAACAAGTTTTTAGAATTATCACTTAATTCCTAGTTTTTGTAGCTG TAATTAGTGCTTTAGATAATCTTGAGAAATTACTAGTCGATCAGCTCATA ACTTAGATAAATTTTTCTTGGAAGATAAAAATATTGTGGCTGGCTGGAGT TCACTACTCAAAGAAAGGAAAATCCTCTTTTGAGAATGTTCATTCAGAGC CATCGAATCCTCTTAACAGATCATAACTTTCATCTATGTCCTGTACTCTG CAATAAAGTCTTATGATGTCCAAAACTTTCTCATGCAGCCACACagactt aaaaacaattttccaatttacTTTTCAAGGAATGTTTTGGAAGTGGTACT GACCATCTTGATAAAAATTTGAGTGCAAACAATCTCCGCTCATCACAACC GGTCGTGTCGAAAACAAATATAATGCCAATGATTCCTCCAACTTACTTTG CAGCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAGAAGGCATCCAAGCT GTCCCAAGTTTAGAATCAGATGGAACTGTCTCCCAACAACACCAAGACAG CCTTTTCTCCGAATGTGTCCTTGATTTgtctaaatctttaattttgatca CACCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTCTGGCAATTTTTTCG TGAAagatatcatcaaaaaattcccGAGG

Coding sequence (CDS) from alignment at scaffold_242:1216777..1231555+

>TCONS_00054254 ID=TCONS_00054254|Name=TCONS_00054254|organism=Clytia hemisphaerica|type=CDS|length=702bp|location=Sequence derived from alignment at scaffold_242:1216777..1231555+ (Clytia hemisphaerica)
ATGCAGATTATCAAACAACATAAACAGGAATGTTTTGGAAGTGGTACTGA
CCATCTTGATAAAAATTTGAGTGCAAACAATCTCCGCTCATCACAACCGG
TCGTGTCGAAAACAAATATAATGCCAATGATTCCTCCAACTTACTTTGCA
GCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAGAAGGCATCCAAGCTGT
CCCAAGTTTAGAATCAGATGGAACTGTCTCCCAACAACACCAAGACAGCC
TTTTCTCCGAATGTGTCCTTGATTTgtctaaatctttaattttgatcaCA
CCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTCTGGCAATTTTTTCGTG
AATGCAGATTATCAAACAACATAAACAGGAATGTTTTGGAAGTGGTACTG
ACCATCTTGATAAAAATTTGAGTGCAAACAATCTCCGCTCATCACAACCG
GTCGTGTCGAAAACAAATATAATGCCAATGATTCCTCCAACTTACTTTGC
AGCTCAACTTCAAGCAGCTCAACGCCGAGCTCAAGAAGGCATCCAAGCTG
TCCCAAGTTTAGAATCAGATGGAACTGTCTCCCAACAACACCAAGACAGC
CTTTTCTCCGAATGTGTCCTTGATTTgtctaaatctttaattttgatcaC
ACCAGGCAGAGGTTTGTGCAACATTTCTGCGTCTCTGGCAATTTTTTCGT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034224XLOC_034224Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054254-proteinTCONS_00054254-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054254-exon-scaffold_242-1491911889:1216777..1217169TCONS_00054254-exon-scaffold_242-1491911889:1216777..1217169Clytia hemisphaericaexon
TCONS_00054254-exon-scaffold_242-1510915933:1216777..1217169TCONS_00054254-exon-scaffold_242-1510915933:1216777..1217169Clytia hemisphaericaexon
TCONS_00054254-exon-scaffold_242-1575043694:1216777..1217169TCONS_00054254-exon-scaffold_242-1575043694:1216777..1217169Clytia hemisphaericaexon
TCONS_00054254-exon-scaffold_242-1491911889:1231206..1231555TCONS_00054254-exon-scaffold_242-1491911889:1231206..1231555Clytia hemisphaericaexon
TCONS_00054254-exon-scaffold_242-1510915933:1231206..1231555TCONS_00054254-exon-scaffold_242-1510915933:1231206..1231555Clytia hemisphaericaexon
TCONS_00054254-exon-scaffold_242-1575043694:1231206..1231555TCONS_00054254-exon-scaffold_242-1575043694:1231206..1231555Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1216777..1231555 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.478563 0 345.189 282.875 439.789 531.361 499.944 298.401 295.207 898.989 2.78856 3.21542 1.26174 1.43117 1.54447 1.37211 3.61577 3.61554 0.419547 0 0 0 0.539491 0 0.294713 0.325838 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054254 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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