TCONS_00054230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054230
Unique NameTCONS_00054230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length89

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054230 ID=TCONS_00054230|Name=TCONS_00054230|organism=Clytia hemisphaerica|type=transcript|length=89bp
ACTTATATTATACCAAATATCTGCCATATTATCGTCTGAGGCGAGTGAAA
GAGCTCTGGTAAAGCAGTTCAATGCCATATCGTATTGTT
Run BLAST on NCBI

transcript from alignment at scaffold_242:687984..688126+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054230 ID=TCONS_00054230|Name=TCONS_00054230|organism=Clytia hemisphaerica|type=transcript|length=143bp|location=Sequence derived from alignment at scaffold_242:687984..688126+ (Clytia hemisphaerica)
ACTTATATTATACCAAATATCTGCCATATTATCGTCTGAGGCGAGTGAAA
GAGCTCTTGTAAAGCAGTTCAATGCNGCCATATTATCGTCTGAGGCGAGT
GAAAGAGCTCTGGTAAAGCAGTTCAATGCCATATCGTATTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034206XLOC_034206Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054230-exon-scaffold_242-1491911889:687984..688023TCONS_00054230-exon-scaffold_242-1491911889:687984..688023Clytia hemisphaericaexon
TCONS_00054230-exon-scaffold_242-1510915933:687984..688023TCONS_00054230-exon-scaffold_242-1510915933:687984..688023Clytia hemisphaericaexon
TCONS_00054230-exon-scaffold_242-1575043694:687984..688023TCONS_00054230-exon-scaffold_242-1575043694:687984..688023Clytia hemisphaericaexon
TCONS_00054230-exon-scaffold_242-1491911889:688078..688126TCONS_00054230-exon-scaffold_242-1491911889:688078..688126Clytia hemisphaericaexon
TCONS_00054230-exon-scaffold_242-1510915933:688078..688126TCONS_00054230-exon-scaffold_242-1510915933:688078..688126Clytia hemisphaericaexon
TCONS_00054230-exon-scaffold_242-1575043694:688078..688126TCONS_00054230-exon-scaffold_242-1575043694:688078..688126Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:687984..688126 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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