TCONS_00054229 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054229
Unique NameTCONS_00054229
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1206

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054229 ID=TCONS_00054229|Name=TCONS_00054229|organism=Clytia hemisphaerica|type=transcript|length=1206bp
agcaaaaaaagagaaaaattgtgaaaacatCACAAACTAATATATTCTAA
TTTATAAACCATATCAAAGGAATGTCAACATTAGATAGAAGTCCATTAAC
CGCACGTTGTGACTCAAGTGGATCAGAAGAGACTAACGACAGGAATACAC
CTTCCCCTTACAGTATGTTACAAAGTAACCTTGGTGATAACGAACCTTAT
AATCAAAATCATGAATACGCAAAACCTGAAGATTTAAGAGGTGATATAGC
TTTCGAACTTGAAAAAATCGATTCCGCTCGTAAAAAACGGAATTTAATAT
ACGAATCAACAGCACCGATCAGTAATAAACTTGATAATAACCGGAATGGT
ATATTACCTCGTCCGCAGACTGATGCATCCGACGAAGCACTTATACCGCT
CGGAACAGTCAAAGGAACGAAAAGACGAAGGACATTACTAGGTCTGGTGA
TAGCAGTCTTTATTATGTCTTTGGTAGCTGTATCGTTGGCAATTTTCGCA
TTTTTAAGCAGAGATGGCGGTGGATCAATGATGACTCAGAAATCATCAAC
AGAGAAACCAGAGAGTACATCAAGCACAGGAGATCCAATTCTCATTCATG
ACGACAAAGTGGATGCTGAAGAAGTTCATCGCATCAAATACAATCTCACT
CATCTGACTGAACACGTGATAAAAGATTTGGAGGAGAAGATTGAAGCACT
CAACAAAAAATTGGAAGCAAAAGCGATCGAAGGTCCACAGGGACCAGAAG
GACCGGCCGGGCCACCAGGCTCCGGCGACTTCAGTAAATGTACAtatgaa
gagaaaaaaacatttggaTCAAAAACAGTTGCTTTCACAGATACAAGATT
TGTAGCAGACGACAAGaaTACAAAGATCATGTCCGTCACGTGTTCTCATG
TTGGAGCTCAAGCTGCCATTCTCAAAAGCAATTACGATTCAGTCAAAGGT
CAACGAGAATATTTCTGCAGGTGCGCTGGTATCAGTGAACTTCCAGCCTT
AAAATCTAAAGACCCTTTATACATCTCATGTATAATTCACACGTGGAAGT
GTCCTAAAACAACGTAGTATTtttatataccttaagggaacttattttgg
cgggaactaaattttttggtattttgcctaGATAACTTCTTCagttcaca
aaaaaagcttcatataaggcaaaatagaacagatttacactgtcattcgc
caaaat
Run BLAST on NCBI

protein sequence of TCONS_00054229-protein

>TCONS_00054229-protein ID=TCONS_00054229-protein|Name=TCONS_00054229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
MSTLDRSPLTARCDSSGSEETNDRNTPSPYSMLQSNLGDNEPYNQNHEYA
KPEDLRGDIAFELEKIDSARKKRNLIYESTAPISNKLDNNRNGILPRPQT
DASDEALIPLGTVKGTKRRRTLLGLVIAVFIMSLVAVSLAIFAFLSRDGG
GSMMTQKSSTEKPESTSSTGDPILIHDDKVDAEEVHRIKYNLTHLTEHVI
KDLEEKIEALNKKLEAKAIEGPQGPEGPAGPPGSGDFSKCTYEEKKTFGS
KTVAFTDTRFVADDKNTKIMSVTCSHVGAQAAILKSNYDSVKGQREYFCR
CAGISELPALKSKDPLYISCIIHTWKCPKTT
Run BLAST on NCBI

transcript from alignment at scaffold_242:677870..683673+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054229 ID=TCONS_00054229|Name=TCONS_00054229|organism=Clytia hemisphaerica|type=transcript|length=5804bp|location=Sequence derived from alignment at scaffold_242:677870..683673+ (Clytia hemisphaerica)
agcaaaaaaagagaaaaattgtgaaaacatCACAAACTAATATATTCTAA TTTATAAACCATATCAAAGGAATGTCAACATTAGATAGAAGTCCATTAAC CGCACGTTGTGACTCAAGTGGATCAGAAGAGACTAACGACAGGAATACAC CTTCCCCTTACAGTATGTTACAAAGTAACCTTGGTGATAACGAACCTTAT AATCAAAATCATGAATACGCAAAACCTGAAGATTTAAGAGGTGATATAGC TTTCGAACTTGAAAAAATCGATTCCGCTCGTAAAAAACGGAATTTAATAT ACGAATCAACAGCACCGATCAGTAATAAACTTGATAATAACCGGAATGGT ATATTACCTCGTCCGCAGACTGATGCATCCGACGAAGCACTTATACCGCT CGGAACAGTCAAAGGAACGAAAAGACGAAGGACATTACTAGGTCTGGTGA TAGCAGTCTTTATTATGTCTTTGGTAGCTGTATCGTTGGCAATTTTCGCA TTTTTAAGCAGAGATGGCGGTGGATCAATGATGACTCAGAAATCATCAAC AGGTAAGAAGTGTTctctcaaaactcaaaaaatatcgaattttaaTCGAA GAAAAGCTCGTTATGATATAATGAAAATATTCAGTGCCTAAAGGTTTAGA AATGAAACCAACCTTTCCGCAATATATACGTGAACGTTATATATAATCTG AAAGTAGTACGCCATGTAAGAAACCTCTTTTGGGCCATTTGGCAAAGAAA ATAGTTATTTTAGAATCATTTTAGAATACTGATAAAAATAGATACCTTAA AGAAAGAAACTGCGAGAAGACATTTCCGCAAATTTTATATTTCacggttc acagctcaaaattcggaagtttcgcggaatttaatttcacggttTTGTCA AAAagccgcgaaattaaattccgcgaaaatttctttccaaGGTAATCCTA TAAcataatactttaatgggataaattttcgcggggattNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNtctcgattttgtgacttttactgtcaaatcat gcatattggttgttgaaatacacattatttgcgcctctttgatgcaagta accattcaaatagtatttctttgacatattttgagttttgttcaGAAATA ATTCGCAGATGGgccttttttaaatttccaacgggacttattttcgcgga tgacacccaaatccgcgaaatccgcgaaaattaatccccgcgaaaattaa tcccattaaagtatcccCTTTGAAATTTAAGTGAGCTGCATTCAAATCTT GATTCGGGTTTTAAACTTCTAATCAAATTAACTTTGACAAGAGAGGCACA TATGAGAAAATAATATGATCAAAGCCACGTTACAAAGCACTTCATCACAT AGTTGTCATACCTTTGAAATGATCATTTGATTGAATTATAATTTCTGTCT GGTTTTCGTGGTcgattggaaagaaaaaacgaTTAAAACGATACCAATCT AAGTATTTTAAGCTGTCATGAAAATGTCACAGCggtaaaaatgttcttaa ccaaAATTTGATCGTTTTATaacacaatacaccttttcgaccgtagccgc taattgctgcgcgggcattttttgtccactttaccaccttaaaaccgtcc cagtcttttcttcgcacctatagacaatagaaaaatgtgtaaaaaaaaaa aggattggatcgagtttagggggataattaaataataaagtagcACGAGT CTGACCacacgactacggtcgaaaatgtGTATAGGGATAAATTCATCAGA CGAAtacaattcctttgtttttttcttgacaAATAATTGGTAGCCTTGCC TTGGTAGTCATTAAAAAGCCCAAACAAATTAGGATTGATGAAAAAGAACA ACCATGAATAAACCTACAAAAACTCGTCCAAGCTATCAAGATATCAACCT TCCCGAAAATTCACTTATTTCGAAGATAAATCTATCAGTGCTAAGATACA TCCCtctctcacagacccagtggataaaaattcctattgaaatctaATTG AAATCCTAAtcgggatagaaattttattgttccaaggttaaaaaacgtag tgggatggttttggagtacaatttttaaacatggaatttcgattAGGGAT GAAGGTCCCAGCGGATCTGTGACACAGACAGCGTTAAGATTTGAGATTTT CGAAATACTGACCCTATACTATTACTGaaagaaaagttaagaacaattag CAAACAAAATATCTTTCGTTCTTTATTCCACAGAGAAACCAGAGAGTACA TCAAGCACAGGAGATCCAATTCTCATTCATGACGACAAAGTGGATGCTGA AGAAGTTCATCGCATCAAATACAATCTCACTCATCTGACTGAACACGTGG TAAGtgtgttttgatgttttgatgaCCAATCATTTTTTCATTCTCACCGT TCAAAGAAGGTTGTACACATCCCCTCTggtatgttttgatataggggatt tCATATAATTCTTGTTCAAGAGTTACCCCATTATTCCAagaggcaaactt aaaatccgtaaatataaaaatctttaaagcgccgaaaatgCTATTATTGC CATTAACCGGgtttagttaactaggctagggTTACATCAGCCCTCTGTGT CATCTAAAATGAGCCCTGGCCAAGATGGGAAAAATTCTTCTTAGCAAAAT TCCGACCTATCATTCAACTTTAAATAAACAAACACAGCATAGCACGACAA AGATTTTAAAACTCATTATTTGACTTTTCTAGATAAAAGATTTGGAGGAG AAGATTGAAGCACTCAACAAAAAATTGGTAAGCAAATCTTCCTTTGTAAA GATATAGAAATGCTAagtaagaaaatgaagaaaaaaagaaaaatcctgAA CACGACTAAACTGATCAGGACAATGAGAAATTACTGTAGACTAACTTACC GCCGATACCATACTATCAAGGCTTTCACAAGTTCGCTGCCGAGctttttt cagaaatcaaacATTCGAACTCTTGGAATTTGATCGAATGTTTGAGTTCA AATGCCTTCAAATCGTGTACCAATCGACGCAGAATTTCACGTAGATTTTA AAAATGCTAtaaaatgcaaacaaaaattCATATATTAAAAGTTTTGGCTC TTTAAAAAGTGTCGCGACCAGAAACTTTCGAGTTTAgtccttttcgcgaa agtaaatgtctttaaaatcaattcgtGAAAGTTTATTCTTGACCAggcga aagtttgtacacctaaagtaAAGTACATCTAAATTGATAAAGCCATTTTC TCTTGCAGGAAGCAAAAGCGATCGAAGGTCCACAGGGACCAGAAGGACCG GCCGGGCCACCAGGCTCCGGCGACTTCAGTAAATGTACAtatgaagagaa aaaaacatttggaTCAAAAACAGTTGCTTTCACAGATACAAGATTTGTAG CAGACGACAAGGTGAGTTTATTCGTCTaataattctttcatttttaagaa atgAATAACAAAGAATAGCAAAAGATGCCTTTTACCTTTGACAGGCTTTT TAGAAAAGTTCATTTGCTTTAGGTGTAAGCTTTTTTGTCTACCATGTGAA AACCATTAACAGAGATTTCGTGTACTATTAACAAAATCGAAATTATAAAT ATTCCAAAATGGTAGGAAAGAAATTTAACTGTTCAAAGACAAGAGGAAAA CTTCGGCACCGTATCCTCCATCCGAGCCAGAATGTTTCCAACTCAGGTCA AATTTTTGATAATCATGAGNAGTGGACAAAAAgattaaagaaaacaaaga gCAAGAAATGAAAGAGATCATTGAACCAGATTTGTTCAGGTAAGTGGATT TTTGATTCTATACTCTTTcctatagcctggatatccagaccgtaaactat ttcaccgtctagttttttataatcttttctctggtttacggtctggtcca atcAACGACCTAATAAAGTAGNgcgattttcgcgaattttggcccttttc gcgaaagtaaatgtctttaaaaattctagaaagggccattcgcgaaagtt tatgctcgcgaaatattcttgacaaaatagaaaatctgtaaaacttcNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaatgataaaaaa attaatgattttttgcatcattaaaatgtcattccgcgtgcaaaagtatt tttttaagattagctattggttgatattgatcacatgacctaagttttgt gaatatgttcttaatttcaagtcaaacttttaggcttaaaaatttgtaaa cattgttaaaattataacatttgtatttggatagtgtttgtgttttttat cttaagaacgcaccatgaacgcacgtttatttttttagttagagtctttc aaaaatgtttatgttcttaaagaaaatgcgctgaaaagcgcaacagtgtt gtcgaaaaatgttgaaaaatatcttgtgagaaagatgattaaaaatgcga tctgaagtaagcaaaaaaaatcgaaaattatgtttatggtcagtagaaat tcgatataattgattttacaccatttagagatgcttgtaaaaagtctaat ttctttttaatatgacttacgcggacggtggaaagacggcaagatgaaag aatacaaaatgaatagaaaacaaaagatttttaagagccATGGTATGAAG TTCTTagtctatctattttattaagtcgttgttcaaactttgaacaaaaa gtaacttttatgacactttttagcctgctaaaagactaataagtcaaagg acaaatgtttcaagccaatccaagaagtatttgtccctctaagccatttt ttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ATTtctccgttaaattcgcgaaagtaaatgttgtgaatttcgcgattttt cgtcctcgcgaaagtttctgctcgcgaaagtttgtacgcctaaagtatat tcttttcattttagaaTACAAAGATCATGTCCGTCACGTGTTCTCATGTT GGAGCTCAAGCTGCCATTCTCAAAAGCAATTACGATTCAGTCAAAGGTCA ACGAGAATATTTCTGCAGGTGCGCTGGTATCAGTGAACTTCCAGCCTTAA AATCTAAAGACCCTTTATACATCTCATGTATAATTCACACGTGGAAGTGT CCTAAAACAACGTAGTATTtttatataccttaagggaacttattttggcg ggaactaaattttttggtattttgcctaGATAACTTCTTCagttcacaaa aaaagcttcatataaggcaaaatagaacagatttacactgtcattcgcca aaat

Coding sequence (CDS) from alignment at scaffold_242:677870..683673+

>TCONS_00054229 ID=TCONS_00054229|Name=TCONS_00054229|organism=Clytia hemisphaerica|type=CDS|length=4980bp|location=Sequence derived from alignment at scaffold_242:677870..683673+ (Clytia hemisphaerica)
ATGTCAACATTAGATAGAAGTCCATTAACCGCACGTTGTGACTCAAGTGG
ATCAGAAGAGACTAACGACAGGAATACACCTTCCCCTTACAGTATGTTAC
AAAGTAACCTTGGTGATAACGAACCTTATAATCAAAATCATGAATACGCA
AAACCTGAAGATTTAAGAGGTGATATAGCTTTCGAACTTGAAAAAATCGA
TTCCGCTCGTAAAAAACGGAATTTAATATACGAATCAACAGCACCGATCA
GTAATAAACTTGATAATAACCGGAATGGTATATTACCTCGTCCGCAGACT
GATGCATCCGACGAAGCACTTATACCGCTCGGAACAGTCAAAGGAACGAA
AAGACGAAGGACATTACTAGGTCTGGTGATAGCAGTCTTTATTATGTCTT
TGGTAGCTGTATCGTTGGCAATTTTCGCATTTTTAAGCAGAGATGGCGGT
GGATCAATGATGACTCAGAAATCATCAACAGAGAAACCAGAGAGTACATC
AAGCACAGGAGATCCAATTCTCATTCATGACGACAAAGTGGATGCTGAAG
AAGTTCATCGCATCAAATACAATCTCACTCATCTGACTGAACACGTGATA
AAAGATTTGGAGGAGAAGATTGAAGCACTCAACAAAAAATTGGAAGCAAA
AGCGATCGAAGGTCCACAGGGACCAGAAGGACCGGCCGGGCCACCAGGCT
CCGGCGACTTCAGTAAATGTACAtatgaagagaaaaaaacatttggaTCA
AAAACAGTTGCTTTCACAGATACAAGATTTGTAGCAGACGACAAGaaTAC
AAAGATCATGTCCGTCACGTGTTCTCATGTTGGAGCTCAAGCTGCCATTC
TCAAAAGCAATTACGATTCAGTCAAAGGTCAACGAGAATATTTCTGCAGG
TGCGCTGGTATCAGTGAACTTCCAGCCTTAAAATCTAAAGACCCTTTATA
CATCTCATGTATAATTCACACGTGGAAGTGTCCTAAAACAACGTAGATGT
CAACATTAGATAGAAGTCCATTAACCGCACGTTGTGACTCAAGTGGATCA
GAAGAGACTAACGACAGGAATACACCTTCCCCTTACAGTATGTTACAAAG
TAACCTTGGTGATAACGAACCTTATAATCAAAATCATGAATACGCAAAAC
CTGAAGATTTAAGAGGTGATATAGCTTTCGAACTTGAAAAAATCGATTCC
GCTCGTAAAAAACGGAATTTAATATACGAATCAACAGCACCGATCAGTAA
TAAACTTGATAATAACCGGAATGGTATATTACCTCGTCCGCAGACTGATG
CATCCGACGAAGCACTTATACCGCTCGGAACAGTCAAAGGAACGAAAAGA
CGAAGGACATTACTAGGTCTGGTGATAGCAGTCTTTATTATGTCTTTGGT
AGCTGTATCGTTGGCAATTTTCGCATTTTTAAGCAGAGATGGCGGTGGAT
CAATGATGACTCAGAAATCATCAACAGAGAAACCAGAGAGTACATCAAGC
ACAGGAGATCCAATTCTCATTCATGACGACAAAGTGGATGCTGAAGAAGT
TCATCGCATCAAATACAATCTCACTCATCTGACTGAACACGTGATAAAAG
ATTTGGAGGAGAAGATTGAAGCACTCAACAAAAAATTGGAAGCAAAAGCG
ATCGAAGGTCCACAGGGACCAGAAGGACCGGCCGGGCCACCAGGCTCCGG
CGACTTCAGTAAATGTACAtatgaagagaaaaaaacatttggaTCAAAAA
CAGTTGCTTTCACAGATACAAGATTTGTAGCAGACGACAAGaaTACAAAG
ATCATGTCCGTCACGTGTTCTCATGTTGGAGCTCAAGCTGCCATTCTCAA
AAGCAATTACGATTCAGTCAAAGGTCAACGAGAATATTTCTGCAGGTGCG
CTGGTATCAGTGAACTTCCAGCCTTAAAATCTAAAGACCCTTTATACATC
TCATGTATAATTCACACGTGGAAGTGTCCTAAAACAACGTAGATGTCAAC
ATTAGATAGAAGTCCATTAACCGCACGTTGTGACTCAAGTGGATCAGAAG
AGACTAACGACAGGAATACACCTTCCCCTTACAGTATGTTACAAAGTAAC
CTTGGTGATAACGAACCTTATAATCAAAATCATGAATACGCAAAACCTGA
AGATTTAAGAGGTGATATAGCTTTCGAACTTGAAAAAATCGATTCCGCTC
GTAAAAAACGGAATTTAATATACGAATCAACAGCACCGATCAGTAATAAA
CTTGATAATAACCGGAATGGTATATTACCTCGTCCGCAGACTGATGCATC
CGACGAAGCACTTATACCGCTCGGAACAGTCAAAGGAACGAAAAGACGAA
GGACATTACTAGGTCTGGTGATAGCAGTCTTTATTATGTCTTTGGTAGCT
GTATCGTTGGCAATTTTCGCATTTTTAAGCAGAGATGGCGGTGGATCAAT
GATGACTCAGAAATCATCAACAGAGAAACCAGAGAGTACATCAAGCACAG
GAGATCCAATTCTCATTCATGACGACAAAGTGGATGCTGAAGAAGTTCAT
CGCATCAAATACAATCTCACTCATCTGACTGAACACGTGATAAAAGATTT
GGAGGAGAAGATTGAAGCACTCAACAAAAAATTGGAAGCAAAAGCGATCG
AAGGTCCACAGGGACCAGAAGGACCGGCCGGGCCACCAGGCTCCGGCGAC
TTCAGTAAATGTACAtatgaagagaaaaaaacatttggaTCAAAAACAGT
TGCTTTCACAGATACAAGATTTGTAGCAGACGACAAGaaTACAAAGATCA
TGTCCGTCACGTGTTCTCATGTTGGAGCTCAAGCTGCCATTCTCAAAAGC
AATTACGATTCAGTCAAAGGTCAACGAGAATATTTCTGCAGGTGCGCTGG
TATCAGTGAACTTCCAGCCTTAAAATCTAAAGACCCTTTATACATCTCAT
GTATAATTCACACGTGGAAGTGTCCTAAAACAACGTAGATGTCAACATTA
GATAGAAGTCCATTAACCGCACGTTGTGACTCAAGTGGATCAGAAGAGAC
TAACGACAGGAATACACCTTCCCCTTACAGTATGTTACAAAGTAACCTTG
GTGATAACGAACCTTATAATCAAAATCATGAATACGCAAAACCTGAAGAT
TTAAGAGGTGATATAGCTTTCGAACTTGAAAAAATCGATTCCGCTCGTAA
AAAACGGAATTTAATATACGAATCAACAGCACCGATCAGTAATAAACTTG
ATAATAACCGGAATGGTATATTACCTCGTCCGCAGACTGATGCATCCGAC
GAAGCACTTATACCGCTCGGAACAGTCAAAGGAACGAAAAGACGAAGGAC
ATTACTAGGTCTGGTGATAGCAGTCTTTATTATGTCTTTGGTAGCTGTAT
CGTTGGCAATTTTCGCATTTTTAAGCAGAGATGGCGGTGGATCAATGATG
ACTCAGAAATCATCAACAGAGAAACCAGAGAGTACATCAAGCACAGGAGA
TCCAATTCTCATTCATGACGACAAAGTGGATGCTGAAGAAGTTCATCGCA
TCAAATACAATCTCACTCATCTGACTGAACACGTGATAAAAGATTTGGAG
GAGAAGATTGAAGCACTCAACAAAAAATTGGAAGCAAAAGCGATCGAAGG
TCCACAGGGACCAGAAGGACCGGCCGGGCCACCAGGCTCCGGCGACTTCA
GTAAATGTACAtatgaagagaaaaaaacatttggaTCAAAAACAGTTGCT
TTCACAGATACAAGATTTGTAGCAGACGACAAGaaTACAAAGATCATGTC
CGTCACGTGTTCTCATGTTGGAGCTCAAGCTGCCATTCTCAAAAGCAATT
ACGATTCAGTCAAAGGTCAACGAGAATATTTCTGCAGGTGCGCTGGTATC
AGTGAACTTCCAGCCTTAAAATCTAAAGACCCTTTATACATCTCATGTAT
AATTCACACGTGGAAGTGTCCTAAAACAACGTAGATGTCAACATTAGATA
GAAGTCCATTAACCGCACGTTGTGACTCAAGTGGATCAGAAGAGACTAAC
GACAGGAATACACCTTCCCCTTACAGTATGTTACAAAGTAACCTTGGTGA
TAACGAACCTTATAATCAAAATCATGAATACGCAAAACCTGAAGATTTAA
GAGGTGATATAGCTTTCGAACTTGAAAAAATCGATTCCGCTCGTAAAAAA
CGGAATTTAATATACGAATCAACAGCACCGATCAGTAATAAACTTGATAA
TAACCGGAATGGTATATTACCTCGTCCGCAGACTGATGCATCCGACGAAG
CACTTATACCGCTCGGAACAGTCAAAGGAACGAAAAGACGAAGGACATTA
CTAGGTCTGGTGATAGCAGTCTTTATTATGTCTTTGGTAGCTGTATCGTT
GGCAATTTTCGCATTTTTAAGCAGAGATGGCGGTGGATCAATGATGACTC
AGAAATCATCAACAGAGAAACCAGAGAGTACATCAAGCACAGGAGATCCA
ATTCTCATTCATGACGACAAAGTGGATGCTGAAGAAGTTCATCGCATCAA
ATACAATCTCACTCATCTGACTGAACACGTGATAAAAGATTTGGAGGAGA
AGATTGAAGCACTCAACAAAAAATTGGAAGCAAAAGCGATCGAAGGTCCA
CAGGGACCAGAAGGACCGGCCGGGCCACCAGGCTCCGGCGACTTCAGTAA
ATGTACAtatgaagagaaaaaaacatttggaTCAAAAACAGTTGCTTTCA
CAGATACAAGATTTGTAGCAGACGACAAGaaTACAAAGATCATGTCCGTC
ACGTGTTCTCATGTTGGAGCTCAAGCTGCCATTCTCAAAAGCAATTACGA
TTCAGTCAAAGGTCAACGAGAATATTTCTGCAGGTGCGCTGGTATCAGTG
AACTTCCAGCCTTAAAATCTAAAGACCCTTTATACATCTCATGTATAATT
CACACGTGGAAGTGTCCTAAAACAACGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034205XLOC_034205Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054229-exon-scaffold_242-1491911889:677870..678421TCONS_00054229-exon-scaffold_242-1491911889:677870..678421Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1510915933:677870..678421TCONS_00054229-exon-scaffold_242-1510915933:677870..678421Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1575043694:677870..678421TCONS_00054229-exon-scaffold_242-1575043694:677870..678421Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1491911889:680353..680468TCONS_00054229-exon-scaffold_242-1491911889:680353..680468Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1510915933:680353..680468TCONS_00054229-exon-scaffold_242-1510915933:680353..680468Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1575043694:680353..680468TCONS_00054229-exon-scaffold_242-1575043694:680353..680468Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1491911889:680852..680896TCONS_00054229-exon-scaffold_242-1491911889:680852..680896Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1510915933:680852..680896TCONS_00054229-exon-scaffold_242-1510915933:680852..680896Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1575043694:680852..680896TCONS_00054229-exon-scaffold_242-1575043694:680852..680896Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1491911889:681378..681530TCONS_00054229-exon-scaffold_242-1491911889:681378..681530Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1510915933:681378..681530TCONS_00054229-exon-scaffold_242-1510915933:681378..681530Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1575043694:681378..681530TCONS_00054229-exon-scaffold_242-1575043694:681378..681530Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1491911889:683334..683673TCONS_00054229-exon-scaffold_242-1491911889:683334..683673Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1510915933:683334..683673TCONS_00054229-exon-scaffold_242-1510915933:683334..683673Clytia hemisphaericaexon
TCONS_00054229-exon-scaffold_242-1575043694:683334..683673TCONS_00054229-exon-scaffold_242-1575043694:683334..683673Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054229-proteinTCONS_00054229-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:677870..683673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0361959 0.069401 0.284173 0.197579 39.4501 27.1806 37.929 42.5516 32.2907 34.8364 30.0446 23.8244 32.0504 31.8751 24.5456 23.7063 25.7472 19.8828 44.5097 51.7241 42.8537 40.6595 21.8438 27.79 46.9325 45.1289 34.3026 26.3218 92.6914 113.312
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054229 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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