TCONS_00054175 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054175
Unique NameTCONS_00054175
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2672

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054175 ID=TCONS_00054175|Name=TCONS_00054175|organism=Clytia hemisphaerica|type=transcript|length=2672bp
CAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTA
AACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAAT
CTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaa
aaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAA
TCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGA
AGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTA
CAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGT
AGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAA
AGCTAATGGGAAGAAAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAAT
CAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCT
AAAGCAAAAGCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTC
GGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAA
AAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGAC
AGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCTCCAGC
TAAGAAAGTAGCAGCAAAGAAAGAATCAACAAAGAAAGAATCAAGCTCAG
AAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAA
GCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGA
AGAAGAGGAAGAGAAACCTGCGAAAAAAGCACCAAAACGAAAGAAGGATT
CCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACaaaaa
gaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAA
TACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTAT
CATACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAA
ATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATC
AAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAAT
GTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGAT
GCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGG
AGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCG
GCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTT
GTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATT
TAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTA
GAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCT
CACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGT
TTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGAC
GAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGT
GGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCG
TGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCT
CCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGAT
AAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTC
TTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATG
AAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGC
TTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTAT
TTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGC
TGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacg
aagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATT
TGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAA
GACTCATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTTC
AAACGGGCTATAATAAATAACAAtacattatttttttgtatttttttcat
ggTTTTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACAT
AATACTTTAttatacatttttaatttttgtcattttttggtaaaaaagac
ATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTC
CACTCCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTCA
GATATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaa
gaaatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagcttta
aaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69506..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054175 ID=TCONS_00054175|Name=TCONS_00054175|organism=Clytia hemisphaerica|type=transcript|length=11305bp|location=Sequence derived from alignment at scaffold_242:69506..80810+ (Clytia hemisphaerica)
CAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTA
AACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAAT
CTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaa
aaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAA
TCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGA
AGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTA
TGTTTTTTACATTAGATTAgacatttgatattttatgcCTAACATCAGAG
TAACTGGGATAGGAAAAATACAGTGGGTCTCAGGGAAGTTTAGGAAAAAG
TAGCTGTAACAAAAATGACTATGCTATCAACTTTGTTGGAATTTCACAAT
TTGTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGATACCTGGTGTAGGCG
AATAGGTAGATAAGGGGCATTTGACTGCCTGGATGCAACTGGAAAGATCC
AGGCGTTCTGTGGGATCCTAGGATTGTGGGGAAGCATCTGCCTTTAAAAA
ACAGAGGCGCACTGATATGTCTCTAAACAAGTCCAGGTCCCATGAGTCCA
ATCCAAGActgtttgaaatttattttaaatttcctATTTGGAGTTACCAA
AATTCTTTATGAAAATCATTTAACACAAAActtgatcaaatttaaaatgt
aaaagCAGCAAATATATATACAGAATAGAACAGAAAAATGAAGTGACTGC
TTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAggcaaaaaatctttg
aaaattgcagataaaatctttaaaaaaacacTTGATGATCAAGAGGCTGG
CTACGTTGAATCTACAAAATTATTTGGATAGTATTGCCAAAAAATCTGAC
AAATATTACGACTAGAAAAGGGTCAGATTTTTAAGATAGAGCGTGAGCGA
GTTGGAGGACTTGAACCAACTTATTTGTGACCCAGGCCTAGCTCAACAAA
ACCATGTCCCAATCAAAGATAAAGAAGAGGAATGTGGAATTATTTCTGCA
TTTCGATCAGCTATCGAAACATAGAACTATTTCTTTAATGTGGTTTAAAT
TGTTTTTagtatttacattttttgtgaaatttctagCTTCCATTTGAAAA
AGGATATCATTTTTTTTTGAGTCACAAAAGATACGGAAATTACTACATAG
CAGTCAGCTGTAAATAATTGGAAATAAAgttaattaaattttcaaaatga
tttagGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACA
GTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCA
AATGGAAAAGCTAATGGGAAGAAAGGTAAAATTTTCAGTTACAGTACACA
TTgctatatcaattttttttaaatatatcatTTAGTAAGATTTTGCTGAG
GCTTGgcttttcttatatttttggcCCTTTAAGCCTCAAATTTTTCTTAT
CCTGTTCTCATggggtgtaattgaggtataTCAAgcattatacccaattt
ttactactttgaccccaaaattagtatttttctTAAATATTCTAATGCTt
cggcgattttgagcctcaaagtgtataccttattacacaaatattactag
tATTTTATTAACACAAATTGAAAAGTTTCATGTTAATAAAAACCAGCCGT
GATGTCCTTGaagaagcaaataaaatttgtgttaattttttgcgtgttaa
tttcaaggtcATTGAATACTTTCCTCGTAATATTTGTGCAATAAGGTAAT
TAtattattttctggtttacagacattatgaggaaaagttttggacagga
ggatggaaaaaaaaataaaaataaaattaatgttttaaatttttttttag
tttctttttaaaaatctgaattcaaaggaaataataaaataaaattttac
gaaatttccTAAAGTatcaaatttttagatttaaagacaaaagaatAAAG
TGCAAGATGTTGTGTAGATTAGTTTTAGATACGCATCTACggataaaaac
ataaaaaatgtacACATAAAGACTGATATGTGTTTATGTAAGACTGAcgt
aggttcccacttaggttcccccatcccacttctGGTATGCCTATTTTTCT
ATCTACTCTTGAATTTTAACAATCACATAAAGGACCCTGAATAAAAGCaa
ttacaataaaaaatcaactgcGTAACACAAGAGTTGtataatttagtttt
tttttatttacttgcCTAAACCTGGAAAGTAAgacagaaaaaattaaatt
aaaaattaaaaaaattaaaaattgatagATATCTCATATAATACTCAGTA
CTGGGCAATACCTAGTTAATTTAACATATGGGGTATATTTTGgggcaaaa
atttaatttttgacaaTCTAATTTCACTTATTGGATTTTGAGGAAAGTTA
GCTAAAATGTTTGTTTTAACCTACAGCACCAGCAAAGAAAGAATCAAGCT
CAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCTGGT
AAAAAGTTTAAagcctttaaattgagaaaatgcaGATTACACACACAGAT
CTAGGGGGTTTAAAAGATCTTTGTGAAactaaaaaatttttgggggattt
tttttcattcaacaaccaaatttagaaaattagtATTAATAACATTATTT
TGGAATAACAGACATGAAGACAATCCCATCTTAGTCTTCTCAGGACAAAT
ACAGCATTTTCTAGAGCACAATGTTGGTTTTACTACACaaataatcatat
ttttcttctttttttgtcaaACTGATACTTTACCTTTACTGCGTTTTTGC
ATAATCAAAGATAGAAGtgcttttttgagagaaaaaaacagttttgaaaa
ctaattttagGTTTTAGTACTGCCACTTGTAGACCTTaagtagtaagtct
gcgaccgcagtcggaggcgacccgaaggctcctctttcgatagctgtcta
cccgaaggtaggggagggcgccactctttctcNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNggttttttcacctttcaaagtctctctaaggg
tcggaaaaatcagaaagttttaaattagtctctctaagggtcggaaaatt
caggaattttatgaaattttttgatttccagagaaaaagttgtaataaag
tctctctaagggtatgacttttttcaaaaatcgaaaaaaaacattcaaag
agtctctctaagggtcaccttttcagcaaaaatcagtctctttaagggtt
gGTTTTCAGAGGTCCCATTCgtacatacccctcattcgccaaccctagta
ccccccggatgaacgttatgtacagaaaaattttatcaCAACTAAAAAAG
TTCTAAGATCTGCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
TGGTATCTGGatcctgaccccccccctgaccAAAAAGGGTACTTTTTGTA
GTGTTTTACCACCAAAAAGGCTGTGTTAAATATATAAAGAAAGCAGTCAT
AAATAGTAAAAAATTTATAAGTGATAACAAAACAGGCCATGTCTTAGAAA
GGTAGCGTCCATTGGTGACCAAAAAGGGTACTTTTTGTAGTGTTTTACCA
CCAAAAAGGCTGTGTTTAGTGAAAGGGGCAGGATCAGTTAATAAGTGGGC
GCTAAAAAAGGGCATTAAAAATGGTCAGACAACAGAACACATAATTGTTC
TGGGTTTCGTCGCTCAAATTGAATTGATAAAGAGGGCGAAATGTTATCAA
GATATTCTATGTTTCTTTTAAGTGCATTCTAGACTACTCTTACTTTTGCG
GGCAGTGCAAAATGTTGTGTGGATATTTCTCAATGGTGTGTGATATGCTT
GTTTACCAGATTTGTCTTATCTAACAACTTTTTTGATTCAGCCCCATCTA
AGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGAT
GAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGGTACAAATTAATGCAG
TGATCTCCTTTAatgtttgaaaatctctttcaTATCATGTGATGCtgcaa
aattttgaagattaatTTTCACATCTAGATTGGGTTATATAACAAGAAAA
CATGAGTTAATACCTGCCTTATGGATCATATGGAACAGTGTTGTTGGGCC
TCCTAAAGTTTCCTGAATTGTCCTAAATTTTGAAGCCATCTAAAATCTCC
TTTGAAGGTGAAATTTTGAACATACAAGTTTCAGAAATTTGATTGTGTTT
AAACAGTAATAAATGCAAGCAAAtctctttgattctttttagCTCCAGCC
AAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGA
TGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATGATTATGTTGT
TTTGGTAAGAAACTAACTTTGACCTCTATTTCATATAATTGATCCTGGTA
CATCACAAATGACTCTTTTGCTTAAGTTTCTGTCACAACAAACTTTGGAT
TTAGACACTTAAAGTTTTGACACTCACATGACTGATTAATATTAAagttt
ccattttcattttaatcCATTAACATCTCTTTCAGCTGAAAGCCGAAAGT
CTGAGATAGCcttgtccaaattttcgtaatCTTACTAAAACATTGCATTT
TTTAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAG
ACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATA
ATGATCTTATTTCATATATAGGTAGTGGTTACTTTTTAAAGGATAGGTTC
TACAGTTCAATATTCTTAGTACGCAGCTGTGTATTGCTTCAACATCTGAT
TGTACAGATTTTTctccaaatttaaatttctacAATTTTGAAATGAAGTT
AAAGAAATTTGTTCCCTTGATGTTTTGAAGGTCTATCTGAAATAAAAAGC
TTTGCTTTGAGCATTGCAATTTTCAAATCTTGGTTCAATTTTTTTAAGCT
CCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAG
TAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGGTAAATAGTTTG
AAACATGCCAAAGATTTATGAAACTCTAccatttaaagggataatcagat
gggttgagatttttttgtttttactaaaagtcaaaaacttctTGTAACAT
AATTACCTTTGCTTTAGAAATACTtaattaaaaagattttgagGTTTGCT
TAGGAAAATAGAAGGATTCCGCATACCAAATATCCCAAACCCATAGTGTG
CAGTGgggtctgacccccccccccccccttttNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccatttat
aTTTCATTCCCCCTATATTTGCATTGGTTGGCAAAcaatatcatactcca
ggatgcaagtcTCAAATTTTCAATCCGTTGGTGGCTAAATAGGGCATTTT
TTCCTAAGTTgttccactaaaaaggctgtttttaccaatattttagtaat
ttcaggaGGGGAAGCGGCTGATAACCAGACGCTTAAAGGGCATAAAAAAT
GGCCTGATAGAAAATAAGGGGAAATAAGAGAGAGCAGACCACTTTTCATA
CCATTCAAGCATCTTGTAATATGATGCTGTCCCTATGAGAACGTTAAAAT
TATTGTGAAAACATCCCTTTTAAGTTTTacaggaaaaaatgtttcaaatt
gtCATTTAAGCTTAAAATATGGAATTTTGGCTTTAGTGAGCATGCATTTG
GTGAACctaattttgcagaatttaatttcgcggttttagacAAACACACA
AATATTCTCATGAATAAAGAATAACctataaaattggtctttttaggcaA
TAAAGgacatattttaaacaaaacatCCTCTCAACCGCAAAATTATATTC
TGCAAAACTtccgaattttgagctgtgaaccaCTAAATGAAATCCCGTGA
AAATATCTTCCCTCAAGTTCATATCAAATGCTTATTCTTTTTTAATTCAG
CCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGAC
AGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGGTACAAA
CCGAGGAAGTCctgttttgtaatattttgataaagaaaCCAAAGTTTTCT
TGTTGTCACTTTTGTGACTTCTGAATTGTAGGTTTAGTTTCAGCTGATTT
TATATTATGATTTAATATTTAGCTCCTGCCAAAAAGAAAGCTGATTCCAG
CTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAG
GTAATTTCATTAATATCCttggtctttattttattattagtgaggttaag
taaatcagtaaaatcacgacgacgaacgaaaatttaaaatttctttcaac
caatcaaaagtAATTAGCTGATTTATTTTAGCCCCACGTTAAGTGATAGC
TCCcaagtacataggtccccccaaaaaagtggtgtTCTTCCAGGCCCCTC
CGTTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGNAA
AAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGGTGTTCTTCCAGCCC
CCTCCGTTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGT
GTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAACATCATGCTTTGTCA
TTATAAGCATGCTGTCTTAATTTATGGTGTGCTGTTTAAGTGGAGGCATG
CGTGTCACATCAAATGATTCAACatgagaaaaaaaacgaaattctATCTT
TTTTAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGA
AGAAGAGGAACAGCCCAAAAAACGTACGTAATATGTCTTTAACTTAAGtg
ttttttcagatttggtTCATTTTCACCGGCTCATTTTCATGTTGAGTGAC
CAAGGCTTTTCTCAGGTCACGAGCTCCCCAGCATGTATTCTGCAATGCTT
GGGTCATATCACCAGAATGTAATATTTCTAAAACTTGCCAACGATTTTAA
GAACTTTTACGACCTTTTATTATcatagaaaaagaagaaaagaaaaattt
gaaacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAA
AGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAA
GATGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTG
CCGTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACG
CTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGAC
ACTACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGC
TAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTG
GTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAAC
CGAGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATA
TGACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATG
CTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTT
GAATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGG
TAAAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAG
AAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGC
AGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGG
TCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCAT
CAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGAT
AATGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTT
ATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTG
GCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAAC
TCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGAT
GAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTAT
TTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATA
ACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaa
aatctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATA
TTGACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatt
tttatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAA
TAACAAtacattatttttttgtatttttttcatggTTTTCAATTGGCTTG
GAAacttttataaacaaaacttttacAGGACATAATACTTTAttatacat
ttttaatttttgtcattttttggtaaaaaagacATCGGATATACGGACAG
TGGTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGC
agtacatgtttttataagcatatcttaGGCTCAGATATTgggaaaattaa
gcatatgtcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAA
GGATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAA
TGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054175-exon-scaffold_242-1491911889:69506..69802TCONS_00054175-exon-scaffold_242-1491911889:69506..69802Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:69506..69802TCONS_00054175-exon-scaffold_242-1510915933:69506..69802Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:69506..69802TCONS_00054175-exon-scaffold_242-1575043694:69506..69802Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:70811..70930TCONS_00054175-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:70811..70930TCONS_00054175-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:70811..70930TCONS_00054175-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:75797..75889TCONS_00054175-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:75797..75889TCONS_00054175-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:75797..75889TCONS_00054175-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:76198..76290TCONS_00054175-exon-scaffold_242-1491911889:76198..76290Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:76198..76290TCONS_00054175-exon-scaffold_242-1510915933:76198..76290Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:76198..76290TCONS_00054175-exon-scaffold_242-1575043694:76198..76290Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:76561..76650TCONS_00054175-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:76561..76650TCONS_00054175-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:76561..76650TCONS_00054175-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:76904..76939TCONS_00054175-exon-scaffold_242-1491911889:76904..76939Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:76904..76939TCONS_00054175-exon-scaffold_242-1510915933:76904..76939Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:76904..76939TCONS_00054175-exon-scaffold_242-1575043694:76904..76939Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:78027..78098TCONS_00054175-exon-scaffold_242-1491911889:78027..78098Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:78027..78098TCONS_00054175-exon-scaffold_242-1510915933:78027..78098Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:78027..78098TCONS_00054175-exon-scaffold_242-1575043694:78027..78098Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:78228..78305TCONS_00054175-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:78228..78305TCONS_00054175-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:78228..78305TCONS_00054175-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:78813..78878TCONS_00054175-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:78813..78878TCONS_00054175-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:78813..78878TCONS_00054175-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:79084..80810TCONS_00054175-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:79084..80810TCONS_00054175-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:79084..80810TCONS_00054175-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69506..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0481737	0.239598	6.59165e-07	0.761875	6.80462e-05	0.00613882	0.0176118	0	0.0884659	0.00253323	0.466793	0.938397	1.72132	0.898131	1.77266	6.2082	0.982615	0.344075	0.0368647	0.387549	2.13544	1.72442	0.454642	0.378584	8.25489e-07	0.000683804	0.0180048	6.1942	0.444321	0.731822
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054175 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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