TCONS_00054175 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054175
Unique NameTCONS_00054175
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2672

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054175 ID=TCONS_00054175|Name=TCONS_00054175|organism=Clytia hemisphaerica|type=transcript|length=2672bp
CAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTA
AACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAAT
CTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaa
aaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAA
TCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGA
AGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTA
CAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGT
AGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAA
AGCTAATGGGAAGAAAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAAT
CAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCT
AAAGCAAAAGCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTC
GGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAA
AAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGAC
AGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCTCCAGC
TAAGAAAGTAGCAGCAAAGAAAGAATCAACAAAGAAAGAATCAAGCTCAG
AAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAA
GCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGA
AGAAGAGGAAGAGAAACCTGCGAAAAAAGCACCAAAACGAAAGAAGGATT
CCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACaaaaa
gaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAA
TACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTAT
CATACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAA
ATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATC
AAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAAT
GTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGAT
GCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGG
AGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCG
GCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTT
GTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATT
TAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTA
GAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCT
CACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGT
TTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGAC
GAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGT
GGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCG
TGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCT
CCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGAT
AAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTC
TTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATG
AAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGC
TTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTAT
TTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGC
TGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacg
aagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATT
TGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAA
GACTCATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTTC
AAACGGGCTATAATAAATAACAAtacattatttttttgtatttttttcat
ggTTTTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACAT
AATACTTTAttatacatttttaatttttgtcattttttggtaaaaaagac
ATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTC
CACTCCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTCA
GATATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaa
gaaatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagcttta
aaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69506..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054175 ID=TCONS_00054175|Name=TCONS_00054175|organism=Clytia hemisphaerica|type=transcript|length=11305bp|location=Sequence derived from alignment at scaffold_242:69506..80810+ (Clytia hemisphaerica)
CAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTA AACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAAT CTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaa aaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAA TCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGA AGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTA TGTTTTTTACATTAGATTAgacatttgatattttatgcCTAACATCAGAG TAACTGGGATAGGAAAAATACAGTGGGTCTCAGGGAAGTTTAGGAAAAAG TAGCTGTAACAAAAATGACTATGCTATCAACTTTGTTGGAATTTCACAAT TTGTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGATACCTGGTGTAGGCG AATAGGTAGATAAGGGGCATTTGACTGCCTGGATGCAACTGGAAAGATCC AGGCGTTCTGTGGGATCCTAGGATTGTGGGGAAGCATCTGCCTTTAAAAA ACAGAGGCGCACTGATATGTCTCTAAACAAGTCCAGGTCCCATGAGTCCA ATCCAAGActgtttgaaatttattttaaatttcctATTTGGAGTTACCAA AATTCTTTATGAAAATCATTTAACACAAAActtgatcaaatttaaaatgt aaaagCAGCAAATATATATACAGAATAGAACAGAAAAATGAAGTGACTGC TTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAggcaaaaaatctttg aaaattgcagataaaatctttaaaaaaacacTTGATGATCAAGAGGCTGG CTACGTTGAATCTACAAAATTATTTGGATAGTATTGCCAAAAAATCTGAC AAATATTACGACTAGAAAAGGGTCAGATTTTTAAGATAGAGCGTGAGCGA GTTGGAGGACTTGAACCAACTTATTTGTGACCCAGGCCTAGCTCAACAAA ACCATGTCCCAATCAAAGATAAAGAAGAGGAATGTGGAATTATTTCTGCA TTTCGATCAGCTATCGAAACATAGAACTATTTCTTTAATGTGGTTTAAAT TGTTTTTagtatttacattttttgtgaaatttctagCTTCCATTTGAAAA AGGATATCATTTTTTTTTGAGTCACAAAAGATACGGAAATTACTACATAG CAGTCAGCTGTAAATAATTGGAAATAAAgttaattaaattttcaaaatga tttagGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACA GTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCA AATGGAAAAGCTAATGGGAAGAAAGGTAAAATTTTCAGTTACAGTACACA TTgctatatcaattttttttaaatatatcatTTAGTAAGATTTTGCTGAG GCTTGgcttttcttatatttttggcCCTTTAAGCCTCAAATTTTTCTTAT CCTGTTCTCATggggtgtaattgaggtataTCAAgcattatacccaattt ttactactttgaccccaaaattagtatttttctTAAATATTCTAATGCTt cggcgattttgagcctcaaagtgtataccttattacacaaatattactag tATTTTATTAACACAAATTGAAAAGTTTCATGTTAATAAAAACCAGCCGT GATGTCCTTGaagaagcaaataaaatttgtgttaattttttgcgtgttaa tttcaaggtcATTGAATACTTTCCTCGTAATATTTGTGCAATAAGGTAAT TAtattattttctggtttacagacattatgaggaaaagttttggacagga ggatggaaaaaaaaataaaaataaaattaatgttttaaatttttttttag tttctttttaaaaatctgaattcaaaggaaataataaaataaaattttac gaaatttccTAAAGTatcaaatttttagatttaaagacaaaagaatAAAG TGCAAGATGTTGTGTAGATTAGTTTTAGATACGCATCTACggataaaaac ataaaaaatgtacACATAAAGACTGATATGTGTTTATGTAAGACTGAcgt aggttcccacttaggttcccccatcccacttctGGTATGCCTATTTTTCT ATCTACTCTTGAATTTTAACAATCACATAAAGGACCCTGAATAAAAGCaa ttacaataaaaaatcaactgcGTAACACAAGAGTTGtataatttagtttt tttttatttacttgcCTAAACCTGGAAAGTAAgacagaaaaaattaaatt aaaaattaaaaaaattaaaaattgatagATATCTCATATAATACTCAGTA CTGGGCAATACCTAGTTAATTTAACATATGGGGTATATTTTGgggcaaaa atttaatttttgacaaTCTAATTTCACTTATTGGATTTTGAGGAAAGTTA GCTAAAATGTTTGTTTTAACCTACAGCACCAGCAAAGAAAGAATCAAGCT CAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCTGGT AAAAAGTTTAAagcctttaaattgagaaaatgcaGATTACACACACAGAT CTAGGGGGTTTAAAAGATCTTTGTGAAactaaaaaatttttgggggattt tttttcattcaacaaccaaatttagaaaattagtATTAATAACATTATTT TGGAATAACAGACATGAAGACAATCCCATCTTAGTCTTCTCAGGACAAAT ACAGCATTTTCTAGAGCACAATGTTGGTTTTACTACACaaataatcatat ttttcttctttttttgtcaaACTGATACTTTACCTTTACTGCGTTTTTGC ATAATCAAAGATAGAAGtgcttttttgagagaaaaaaacagttttgaaaa ctaattttagGTTTTAGTACTGCCACTTGTAGACCTTaagtagtaagtct gcgaccgcagtcggaggcgacccgaaggctcctctttcgatagctgtcta cccgaaggtaggggagggcgccactctttctcNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNggttttttcacctttcaaagtctctctaaggg tcggaaaaatcagaaagttttaaattagtctctctaagggtcggaaaatt caggaattttatgaaattttttgatttccagagaaaaagttgtaataaag tctctctaagggtatgacttttttcaaaaatcgaaaaaaaacattcaaag agtctctctaagggtcaccttttcagcaaaaatcagtctctttaagggtt gGTTTTCAGAGGTCCCATTCgtacatacccctcattcgccaaccctagta ccccccggatgaacgttatgtacagaaaaattttatcaCAACTAAAAAAG TTCTAAGATCTGCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT TGGTATCTGGatcctgaccccccccctgaccAAAAAGGGTACTTTTTGTA GTGTTTTACCACCAAAAAGGCTGTGTTAAATATATAAAGAAAGCAGTCAT AAATAGTAAAAAATTTATAAGTGATAACAAAACAGGCCATGTCTTAGAAA GGTAGCGTCCATTGGTGACCAAAAAGGGTACTTTTTGTAGTGTTTTACCA CCAAAAAGGCTGTGTTTAGTGAAAGGGGCAGGATCAGTTAATAAGTGGGC GCTAAAAAAGGGCATTAAAAATGGTCAGACAACAGAACACATAATTGTTC TGGGTTTCGTCGCTCAAATTGAATTGATAAAGAGGGCGAAATGTTATCAA GATATTCTATGTTTCTTTTAAGTGCATTCTAGACTACTCTTACTTTTGCG GGCAGTGCAAAATGTTGTGTGGATATTTCTCAATGGTGTGTGATATGCTT GTTTACCAGATTTGTCTTATCTAACAACTTTTTTGATTCAGCCCCATCTA AGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGAT GAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGGTACAAATTAATGCAG TGATCTCCTTTAatgtttgaaaatctctttcaTATCATGTGATGCtgcaa aattttgaagattaatTTTCACATCTAGATTGGGTTATATAACAAGAAAA CATGAGTTAATACCTGCCTTATGGATCATATGGAACAGTGTTGTTGGGCC TCCTAAAGTTTCCTGAATTGTCCTAAATTTTGAAGCCATCTAAAATCTCC TTTGAAGGTGAAATTTTGAACATACAAGTTTCAGAAATTTGATTGTGTTT AAACAGTAATAAATGCAAGCAAAtctctttgattctttttagCTCCAGCC AAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGA TGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATGATTATGTTGT TTTGGTAAGAAACTAACTTTGACCTCTATTTCATATAATTGATCCTGGTA CATCACAAATGACTCTTTTGCTTAAGTTTCTGTCACAACAAACTTTGGAT TTAGACACTTAAAGTTTTGACACTCACATGACTGATTAATATTAAagttt ccattttcattttaatcCATTAACATCTCTTTCAGCTGAAAGCCGAAAGT CTGAGATAGCcttgtccaaattttcgtaatCTTACTAAAACATTGCATTT TTTAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAG ACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATA ATGATCTTATTTCATATATAGGTAGTGGTTACTTTTTAAAGGATAGGTTC TACAGTTCAATATTCTTAGTACGCAGCTGTGTATTGCTTCAACATCTGAT TGTACAGATTTTTctccaaatttaaatttctacAATTTTGAAATGAAGTT AAAGAAATTTGTTCCCTTGATGTTTTGAAGGTCTATCTGAAATAAAAAGC TTTGCTTTGAGCATTGCAATTTTCAAATCTTGGTTCAATTTTTTTAAGCT CCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAG TAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGGTAAATAGTTTG AAACATGCCAAAGATTTATGAAACTCTAccatttaaagggataatcagat gggttgagatttttttgtttttactaaaagtcaaaaacttctTGTAACAT AATTACCTTTGCTTTAGAAATACTtaattaaaaagattttgagGTTTGCT TAGGAAAATAGAAGGATTCCGCATACCAAATATCCCAAACCCATAGTGTG CAGTGgggtctgacccccccccccccccttttNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccatttat aTTTCATTCCCCCTATATTTGCATTGGTTGGCAAAcaatatcatactcca ggatgcaagtcTCAAATTTTCAATCCGTTGGTGGCTAAATAGGGCATTTT TTCCTAAGTTgttccactaaaaaggctgtttttaccaatattttagtaat ttcaggaGGGGAAGCGGCTGATAACCAGACGCTTAAAGGGCATAAAAAAT GGCCTGATAGAAAATAAGGGGAAATAAGAGAGAGCAGACCACTTTTCATA CCATTCAAGCATCTTGTAATATGATGCTGTCCCTATGAGAACGTTAAAAT TATTGTGAAAACATCCCTTTTAAGTTTTacaggaaaaaatgtttcaaatt gtCATTTAAGCTTAAAATATGGAATTTTGGCTTTAGTGAGCATGCATTTG GTGAACctaattttgcagaatttaatttcgcggttttagacAAACACACA AATATTCTCATGAATAAAGAATAACctataaaattggtctttttaggcaA TAAAGgacatattttaaacaaaacatCCTCTCAACCGCAAAATTATATTC TGCAAAACTtccgaattttgagctgtgaaccaCTAAATGAAATCCCGTGA AAATATCTTCCCTCAAGTTCATATCAAATGCTTATTCTTTTTTAATTCAG CCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGAC AGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGGTACAAA CCGAGGAAGTCctgttttgtaatattttgataaagaaaCCAAAGTTTTCT TGTTGTCACTTTTGTGACTTCTGAATTGTAGGTTTAGTTTCAGCTGATTT TATATTATGATTTAATATTTAGCTCCTGCCAAAAAGAAAGCTGATTCCAG CTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAG GTAATTTCATTAATATCCttggtctttattttattattagtgaggttaag taaatcagtaaaatcacgacgacgaacgaaaatttaaaatttctttcaac caatcaaaagtAATTAGCTGATTTATTTTAGCCCCACGTTAAGTGATAGC TCCcaagtacataggtccccccaaaaaagtggtgtTCTTCCAGGCCCCTC CGTTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGNAA AAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGGTGTTCTTCCAGCCC CCTCCGTTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGT GTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAACATCATGCTTTGTCA TTATAAGCATGCTGTCTTAATTTATGGTGTGCTGTTTAAGTGGAGGCATG CGTGTCACATCAAATGATTCAACatgagaaaaaaaacgaaattctATCTT TTTTAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGA AGAAGAGGAACAGCCCAAAAAACGTACGTAATATGTCTTTAACTTAAGtg ttttttcagatttggtTCATTTTCACCGGCTCATTTTCATGTTGAGTGAC CAAGGCTTTTCTCAGGTCACGAGCTCCCCAGCATGTATTCTGCAATGCTT GGGTCATATCACCAGAATGTAATATTTCTAAAACTTGCCAACGATTTTAA GAACTTTTACGACCTTTTATTATcatagaaaaagaagaaaagaaaaattt gaaacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAA AGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAA GATGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTG CCGTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACG CTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGAC ACTACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGC TAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTG GTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAAC CGAGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATA TGACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATG CTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTT GAATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGG TAAAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAG AAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGC AGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGG TCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCAT CAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGAT AATGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTT ATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTG GCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAAC TCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGAT GAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTAT TTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATA ACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaa aatctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATA TTGACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatt tttatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAA TAACAAtacattatttttttgtatttttttcatggTTTTCAATTGGCTTG GAAacttttataaacaaaacttttacAGGACATAATACTTTAttatacat ttttaatttttgtcattttttggtaaaaaagacATCGGATATACGGACAG TGGTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGC agtacatgtttttataagcatatcttaGGCTCAGATATTgggaaaattaa gcatatgtcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAA GGATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAA TGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054175-exon-scaffold_242-1491911889:69506..69802TCONS_00054175-exon-scaffold_242-1491911889:69506..69802Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:69506..69802TCONS_00054175-exon-scaffold_242-1510915933:69506..69802Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:69506..69802TCONS_00054175-exon-scaffold_242-1575043694:69506..69802Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:70811..70930TCONS_00054175-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:70811..70930TCONS_00054175-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:70811..70930TCONS_00054175-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:75797..75889TCONS_00054175-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:75797..75889TCONS_00054175-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:75797..75889TCONS_00054175-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:76198..76290TCONS_00054175-exon-scaffold_242-1491911889:76198..76290Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:76198..76290TCONS_00054175-exon-scaffold_242-1510915933:76198..76290Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:76198..76290TCONS_00054175-exon-scaffold_242-1575043694:76198..76290Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:76561..76650TCONS_00054175-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:76561..76650TCONS_00054175-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:76561..76650TCONS_00054175-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:76904..76939TCONS_00054175-exon-scaffold_242-1491911889:76904..76939Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:76904..76939TCONS_00054175-exon-scaffold_242-1510915933:76904..76939Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:76904..76939TCONS_00054175-exon-scaffold_242-1575043694:76904..76939Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:78027..78098TCONS_00054175-exon-scaffold_242-1491911889:78027..78098Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:78027..78098TCONS_00054175-exon-scaffold_242-1510915933:78027..78098Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:78027..78098TCONS_00054175-exon-scaffold_242-1575043694:78027..78098Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:78228..78305TCONS_00054175-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:78228..78305TCONS_00054175-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:78228..78305TCONS_00054175-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:78813..78878TCONS_00054175-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:78813..78878TCONS_00054175-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:78813..78878TCONS_00054175-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1491911889:79084..80810TCONS_00054175-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1510915933:79084..80810TCONS_00054175-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054175-exon-scaffold_242-1575043694:79084..80810TCONS_00054175-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69506..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0481737 0.239598 6.59165e-07 0.761875 6.80462e-05 0.00613882 0.0176118 0 0.0884659 0.00253323 0.466793 0.938397 1.72132 0.898131 1.77266 6.2082 0.982615 0.344075 0.0368647 0.387549 2.13544 1.72442 0.454642 0.378584 8.25489e-07 0.000683804 0.0180048 6.1942 0.444321 0.731822
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054175 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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