TCONS_00054164 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054164
Unique NameTCONS_00054164
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2812

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054164 ID=TCONS_00054164|Name=TCONS_00054164|organism=Clytia hemisphaerica|type=transcript|length=2812bp
CTGCTTCATCGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTA
CAGCCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGA
TTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGG
CTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTctt
aaattcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAG
GCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTC
TGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGA
ATGGAAAAGTCAATGGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCA
TCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAA
TGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGCACCAGCAAAGAAAG
AATCAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCT
AAAGCTGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGA
AGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAG
CTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGAT
AGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCCCCGGC
CAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGACAGTAGTGATG
AAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCTCCAGCTAAGAAAGTA
GCAGCAAAGAAAGAATCAACAAAGAAAGAATCAAGCTCAGAAGAAGACAG
TGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGCTCCTGCCA
AAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAA
GAGAAACCTGCGAAAAAAGCACCAAAACGAAAGAAGGATTCCTCATCTGA
AGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACaaaaagaagaaaaga
aaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAG
AAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACAC
AACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTA
CTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTT
GGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAAT
TGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATA
GTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGA
GGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGG
ATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATC
TCTCATATGACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCT
AATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGC
TTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGA
TGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACA
CCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGG
ATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCG
GCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGT
ACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGAC
ATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGT
CGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTG
CTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTAC
GAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAA
CAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATG
ATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAA
ATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaa
aaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTA
CCATATATTGACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGA
tcacatttttatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTA
TAATAAATAACAAtacattatttttttgtatttttttcatggTTTTCAAT
TGGCTTGGAAacttttataaacaaaacttttacAGGACATAATACTTTAt
tatacatttttaatttttgtcattttttggtaaaaaagacATCGGATATA
CGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTC
AAAATGCagtacatgtttttataagcatatcttaGGCTCAGATATTggga
aaattaagcatatgtcTTGAGGAAATTGATCTacttaaaagaaatacttt
gtTGGAAGGATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattc
gataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69438..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054164 ID=TCONS_00054164|Name=TCONS_00054164|organism=Clytia hemisphaerica|type=transcript|length=11373bp|location=Sequence derived from alignment at scaffold_242:69438..80810+ (Clytia hemisphaerica)
CTGCTTCATCGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTA
CAGCCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGA
TTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGG
CTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTctt
aaattcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAG
GCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTC
TGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGA
ATGGAAAAGTCAATGGTATGTTTTTTACATTAGATTAgacatttgatatt
ttatgcCTAACATCAGAGTAACTGGGATAGGAAAAATACAGTGGGTCTCA
GGGAAGTTTAGGAAAAAGTAGCTGTAACAAAAATGACTATGCTATCAACT
TTGTTGGAATTTCACAATTTGTAAGCTTGTAAGGCTTGTAAGACCCTCAA
GGATACCTGGTGTAGGCGAATAGGTAGATAAGGGGCATTTGACTGCCTGG
ATGCAACTGGAAAGATCCAGGCGTTCTGTGGGATCCTAGGATTGTGGGGA
AGCATCTGCCTTTAAAAAACAGAGGCGCACTGATATGTCTCTAAACAAGT
CCAGGTCCCATGAGTCCAATCCAAGActgtttgaaatttattttaaattt
cctATTTGGAGTTACCAAAATTCTTTATGAAAATCATTTAACACAAAAct
tgatcaaatttaaaatgtaaaagCAGCAAATATATATACAGAATAGAACA
GAAAAATGAAGTGACTGCTTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTG
TAAggcaaaaaatctttgaaaattgcagataaaatctttaaaaaaacacT
TGATGATCAAGAGGCTGGCTACGTTGAATCTACAAAATTATTTGGATAGT
ATTGCCAAAAAATCTGACAAATATTACGACTAGAAAAGGGTCAGATTTTT
AAGATAGAGCGTGAGCGAGTTGGAGGACTTGAACCAACTTATTTGTGACC
CAGGCCTAGCTCAACAAAACCATGTCCCAATCAAAGATAAAGAAGAGGAA
TGTGGAATTATTTCTGCATTTCGATCAGCTATCGAAACATAGAACTATTT
CTTTAATGTGGTTTAAATTGTTTTTagtatttacattttttgtgaaattt
ctagCTTCCATTTGAAAAAGGATATCATTTTTTTTTGAGTCACAAAAGAT
ACGGAAATTACTACATAGCAGTCAGCTGTAAATAATTGGAAATAAAgtta
attaaattttcaaaatgatttagGTACAACCAAAAAGCCTGTCAAAAAAG
AAAGTTCATCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCA
AAGAAAAATGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGGTAAAAT
TTTCAGTTACAGTACACATTgctatatcaattttttttaaatatatcatT
TAGTAAGATTTTGCTGAGGCTTGgcttttcttatatttttggcCCTTTAA
GCCTCAAATTTTTCTTATCCTGTTCTCATggggtgtaattgaggtataTC
AAgcattatacccaatttttactactttgaccccaaaattagtatttttc
tTAAATATTCTAATGCTtcggcgattttgagcctcaaagtgtatacctta
ttacacaaatattactagtATTTTATTAACACAAATTGAAAAGTTTCATG
TTAATAAAAACCAGCCGTGATGTCCTTGaagaagcaaataaaatttgtgt
taattttttgcgtgttaatttcaaggtcATTGAATACTTTCCTCGTAATA
TTTGTGCAATAAGGTAATTAtattattttctggtttacagacattatgag
gaaaagttttggacaggaggatggaaaaaaaaataaaaataaaattaatg
ttttaaatttttttttagtttctttttaaaaatctgaattcaaaggaaat
aataaaataaaattttacgaaatttccTAAAGTatcaaatttttagattt
aaagacaaaagaatAAAGTGCAAGATGTTGTGTAGATTAGTTTTAGATAC
GCATCTACggataaaaacataaaaaatgtacACATAAAGACTGATATGTG
TTTATGTAAGACTGAcgtaggttcccacttaggttcccccatcccacttc
tGGTATGCCTATTTTTCTATCTACTCTTGAATTTTAACAATCACATAAAG
GACCCTGAATAAAAGCaattacaataaaaaatcaactgcGTAACACAAGA
GTTGtataatttagtttttttttatttacttgcCTAAACCTGGAAAGTAA
gacagaaaaaattaaattaaaaattaaaaaaattaaaaattgatagATAT
CTCATATAATACTCAGTACTGGGCAATACCTAGTTAATTTAACATATGGG
GTATATTTTGgggcaaaaatttaatttttgacaaTCTAATTTCACTTATT
GGATTTTGAGGAAAGTTAGCTAAAATGTTTGTTTTAACCTACAGCACCAG
CAAAGAAAGAATCAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAA
CCAAAAGCTAAAGCTGGTAAAAAGTTTAAagcctttaaattgagaaaatg
caGATTACACACACAGATCTAGGGGGTTTAAAAGATCTTTGTGAAactaa
aaaatttttgggggattttttttcattcaacaaccaaatttagaaaatta
gtATTAATAACATTATTTTGGAATAACAGACATGAAGACAATCCCATCTT
AGTCTTCTCAGGACAAATACAGCATTTTCTAGAGCACAATGTTGGTTTTA
CTACACaaataatcatatttttcttctttttttgtcaaACTGATACTTTA
CCTTTACTGCGTTTTTGCATAATCAAAGATAGAAGtgcttttttgagaga
aaaaaacagttttgaaaactaattttagGTTTTAGTACTGCCACTTGTAG
ACCTTaagtagtaagtctgcgaccgcagtcggaggcgacccgaaggctcc
tctttcgatagctgtctacccgaaggtaggggagggcgccactctttctc
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggttttttcacctt
tcaaagtctctctaagggtcggaaaaatcagaaagttttaaattagtctc
tctaagggtcggaaaattcaggaattttatgaaattttttgatttccaga
gaaaaagttgtaataaagtctctctaagggtatgacttttttcaaaaatc
gaaaaaaaacattcaaagagtctctctaagggtcaccttttcagcaaaaa
tcagtctctttaagggttgGTTTTCAGAGGTCCCATTCgtacatacccct
cattcgccaaccctagtaccccccggatgaacgttatgtacagaaaaatt
ttatcaCAACTAAAAAAGTTCTAAGATCTGCTAANNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTGGTATCTGGatcctgaccccccccctgaccA
AAAAGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTAAATA
TATAAAGAAAGCAGTCATAAATAGTAAAAAATTTATAAGTGATAACAAAA
CAGGCCATGTCTTAGAAAGGTAGCGTCCATTGGTGACCAAAAAGGGTACT
TTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTTAGTGAAAGGGGCAGG
ATCAGTTAATAAGTGGGCGCTAAAAAAGGGCATTAAAAATGGTCAGACAA
CAGAACACATAATTGTTCTGGGTTTCGTCGCTCAAATTGAATTGATAAAG
AGGGCGAAATGTTATCAAGATATTCTATGTTTCTTTTAAGTGCATTCTAG
ACTACTCTTACTTTTGCGGGCAGTGCAAAATGTTGTGTGGATATTTCTCA
ATGGTGTGTGATATGCTTGTTTACCAGATTTGTCTTATCTAACAACTTTT
TTGATTCAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCA
GAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAA
AGGTACAAATTAATGCAGTGATCTCCTTTAatgtttgaaaatctctttca
TATCATGTGATGCtgcaaaattttgaagattaatTTTCACATCTAGATTG
GGTTATATAACAAGAAAACATGAGTTAATACCTGCCTTATGGATCATATG
GAACAGTGTTGTTGGGCCTCCTAAAGTTTCCTGAATTGTCCTAAATTTTG
AAGCCATCTAAAATCTCCTTTGAAGGTGAAATTTTGAACATACAAGTTTC
AGAAATTTGATTGTGTTTAAACAGTAATAAATGCAAGCAAAtctctttga
ttctttttagCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTC
GGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAA
AAGGTATGATTATGTTGTTTTGGTAAGAAACTAACTTTGACCTCTATTTC
ATATAATTGATCCTGGTACATCACAAATGACTCTTTTGCTTAAGTTTCTG
TCACAACAAACTTTGGATTTAGACACTTAAAGTTTTGACACTCACATGAC
TGATTAATATTAAagtttccattttcattttaatcCATTAACATCTCTTT
CAGCTGAAAGCCGAAAGTCTGAGATAGCcttgtccaaattttcgtaatCT
TACTAAAACATTGCATTTTTTAGCCCCGGCCAAGAAAGCACCAGCTAAGA
AAGAATCAAGCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAA
GCTAAAGCAAAAGGTATAATGATCTTATTTCATATATAGGTAGTGGTTAC
TTTTTAAAGGATAGGTTCTACAGTTCAATATTCTTAGTACGCAGCTGTGT
ATTGCTTCAACATCTGATTGTACAGATTTTTctccaaatttaaatttcta
cAATTTTGAAATGAAGTTAAAGAAATTTGTTCCCTTGATGTTTTGAAGGT
CTATCTGAAATAAAAAGCTTTGCTTTGAGCATTGCAATTTTCAAATCTTG
GTTCAATTTTTTTAAGCTCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATC
AAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTA
AACCTGGTAAATAGTTTGAAACATGCCAAAGATTTATGAAACTCTAccat
ttaaagggataatcagatgggttgagatttttttgtttttactaaaagtc
aaaaacttctTGTAACATAATTACCTTTGCTTTAGAAATACTtaattaaa
aagattttgagGTTTGCTTAGGAAAATAGAAGGATTCCGCATACCAAATA
TCCCAAACCCATAGTGTGCAGTGgggtctgaccccccccccccccctttt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ccccccccccccatttataTTTCATTCCCCCTATATTTGCATTGGTTGGC
AAAcaatatcatactccaggatgcaagtcTCAAATTTTCAATCCGTTGGT
GGCTAAATAGGGCATTTTTTCCTAAGTTgttccactaaaaaggctgtttt
taccaatattttagtaatttcaggaGGGGAAGCGGCTGATAACCAGACGC
TTAAAGGGCATAAAAAATGGCCTGATAGAAAATAAGGGGAAATAAGAGAG
AGCAGACCACTTTTCATACCATTCAAGCATCTTGTAATATGATGCTGTCC
CTATGAGAACGTTAAAATTATTGTGAAAACATCCCTTTTAAGTTTTacag
gaaaaaatgtttcaaattgtCATTTAAGCTTAAAATATGGAATTTTGGCT
TTAGTGAGCATGCATTTGGTGAACctaattttgcagaatttaatttcgcg
gttttagacAAACACACAAATATTCTCATGAATAAAGAATAACctataaa
attggtctttttaggcaATAAAGgacatattttaaacaaaacatCCTCTC
AACCGCAAAATTATATTCTGCAAAACTtccgaattttgagctgtgaacca
CTAAATGAAATCCCGTGAAAATATCTTCCCTCAAGTTCATATCAAATGCT
TATTCTTTTTTAATTCAGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAA
TCAAGCTCAGAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGC
TAAAGCAAAAGGTACAAACCGAGGAAGTCctgttttgtaatattttgata
aagaaaCCAAAGTTTTCTTGTTGTCACTTTTGTGACTTCTGAATTGTAGG
TTTAGTTTCAGCTGATTTTATATTATGATTTAATATTTAGCTCCTGCCAA
AAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAG
AGAAACCTGCGAAAAAAGGTAATTTCATTAATATCCttggtctttatttt
attattagtgaggttaagtaaatcagtaaaatcacgacgacgaacgaaaa
tttaaaatttctttcaaccaatcaaaagtAATTAGCTGATTTATTTTAGC
CCCACGTTAAGTGATAGCTCCcaagtacataggtccccccaaaaaagtgg
tgtTCTTCCAGGCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggc
tgacgctatgaaGTGNAAAAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAA
GTGGTGTTCTTCCAGCCCCCTCCGTTGGGAAAAATTTCACAACCAGcagg
gggctgacgctatgaaGTGTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTT
TAACATCATGCTTTGTCATTATAAGCATGCTGTCTTAATTTATGGTGTGC
TGTTTAAGTGGAGGCATGCGTGTCACATCAAATGATTCAACatgagaaaa
aaaacgaaattctATCTTTTTTAAGCACCAAAACGAAAGAAGGATTCCTC
ATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACGTACGTAAT
ATGTCTTTAACTTAAGtgttttttcagatttggtTCATTTTCACCGGCTC
ATTTTCATGTTGAGTGACCAAGGCTTTTCTCAGGTCACGAGCTCCCCAGC
ATGTATTCTGCAATGCTTGGGTCATATCACCAGAATGTAATATTTCTAAA
ACTTGCCAACGATTTTAAGAACTTTTACGACCTTTTATTATcatagaaaa
agaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCA
ATACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTA
TCATACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGA
AATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAAT
CAAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAA
TGTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGA
TGCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTG
GAGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGC
GGCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACT
TGTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAAT
TTAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCT
AGAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGC
TCACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCG
TTTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGA
CGAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACG
TGGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTC
GTGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGC
TCCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGA
TAAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCT
CTTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGAT
GAAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAG
CTTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTA
TTTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTG
CTGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTac
gaagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAAT
TTGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTA
AGACTCATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTT
CAAACGGGCTATAATAAATAACAAtacattatttttttgtatttttttca
tggTTTTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACA
TAATACTTTAttatacatttttaatttttgtcattttttggtaaaaaaga
cATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACT
CCACTCCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTC
AGATATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaa
agaaatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagcttt
aaaaaaaattcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054164-exon-scaffold_242-1491911889:69438..69802TCONS_00054164-exon-scaffold_242-1491911889:69438..69802Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:69438..69802TCONS_00054164-exon-scaffold_242-1510915933:69438..69802Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:69438..69802TCONS_00054164-exon-scaffold_242-1575043694:69438..69802Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:70811..70930TCONS_00054164-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:70811..70930TCONS_00054164-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:70811..70930TCONS_00054164-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:72032..72103TCONS_00054164-exon-scaffold_242-1491911889:72032..72103Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:72032..72103TCONS_00054164-exon-scaffold_242-1510915933:72032..72103Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:72032..72103TCONS_00054164-exon-scaffold_242-1575043694:72032..72103Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:75797..75889TCONS_00054164-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:75797..75889TCONS_00054164-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:75797..75889TCONS_00054164-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:76198..76290TCONS_00054164-exon-scaffold_242-1491911889:76198..76290Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:76198..76290TCONS_00054164-exon-scaffold_242-1510915933:76198..76290Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:76198..76290TCONS_00054164-exon-scaffold_242-1575043694:76198..76290Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:76561..76650TCONS_00054164-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:76561..76650TCONS_00054164-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:76561..76650TCONS_00054164-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:76904..76939TCONS_00054164-exon-scaffold_242-1491911889:76904..76939Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:76904..76939TCONS_00054164-exon-scaffold_242-1510915933:76904..76939Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:76904..76939TCONS_00054164-exon-scaffold_242-1575043694:76904..76939Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:78027..78098TCONS_00054164-exon-scaffold_242-1491911889:78027..78098Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:78027..78098TCONS_00054164-exon-scaffold_242-1510915933:78027..78098Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:78027..78098TCONS_00054164-exon-scaffold_242-1575043694:78027..78098Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:78228..78305TCONS_00054164-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:78228..78305TCONS_00054164-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:78228..78305TCONS_00054164-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:78813..78878TCONS_00054164-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:78813..78878TCONS_00054164-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:78813..78878TCONS_00054164-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1491911889:79084..80810TCONS_00054164-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1510915933:79084..80810TCONS_00054164-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054164-exon-scaffold_242-1575043694:79084..80810TCONS_00054164-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69438..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.49093	17.4932	2.26281e-05	0.818147	3.4563	3.33197	0.658788	0	0.812356	2.70267	0.506166	3.01673	1.63332	1.28121	9.69157	17.4225	11.9511	14.4569	0.13264	5.27333	15.4049	13.4695	38.4942	24.4855	1.57959	0.305917	0.605732	8.28198	27.3433	26.5157
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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