TCONS_00054162 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054162
Unique NameTCONS_00054162
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2722

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054162 ID=TCONS_00054162|Name=TCONS_00054162|organism=Clytia hemisphaerica|type=transcript|length=2722bp
CTGCTTCATCGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTA
CAGCCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGA
TTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGG
CTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTctt
aaattcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAG
GCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTC
TGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGA
ATGGAAAAGTCAATGGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCA
TCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAA
TGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGCCCCATCTAAGAAAG
TAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAGAG
GAAGAAAAACCCAAAGCTAAAGCAAAAGCCCCGGCCAAGAAAGCACCAGC
TAAGAAAGAATCAAGCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAAC
CAAAAGCTAAAGCAAAAGCTCCAGCTAAGAAAGTAGCAGCAAAGAAAGAA
TCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGC
TAAACCTGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAG
AAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAA
GCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGA
AGAAGAGGAAGAGAAACCTGCGAAAAAAGCACCAAAACGAAAGAAGGATT
CCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACaaaaa
gaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAA
TACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTAT
CATACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAA
ATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATC
AAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAAT
GTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGAT
GCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGG
AGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCG
GCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTT
GTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATT
TAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTA
GAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCT
CACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGT
TTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGAC
GAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGT
GGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCG
TGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCT
CCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGAT
AAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTC
TTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATG
AAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGC
TTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTAT
TTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGC
TGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacg
aagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATT
TGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAA
GACTCATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTTC
AAACGGGCTATAATAAATAACAAtacattatttttttgtatttttttcat
ggTTTTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACAT
AATACTTTAttatacatttttaatttttgtcattttttggtaaaaaagac
ATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTC
CACTCCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTCA
GATATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaa
gaaatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagcttta
aaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69438..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054162 ID=TCONS_00054162|Name=TCONS_00054162|organism=Clytia hemisphaerica|type=transcript|length=11373bp|location=Sequence derived from alignment at scaffold_242:69438..80810+ (Clytia hemisphaerica)
CTGCTTCATCGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTA
CAGCCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGA
TTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGG
CTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTctt
aaattcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAG
GCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTC
TGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGA
ATGGAAAAGTCAATGGTATGTTTTTTACATTAGATTAgacatttgatatt
ttatgcCTAACATCAGAGTAACTGGGATAGGAAAAATACAGTGGGTCTCA
GGGAAGTTTAGGAAAAAGTAGCTGTAACAAAAATGACTATGCTATCAACT
TTGTTGGAATTTCACAATTTGTAAGCTTGTAAGGCTTGTAAGACCCTCAA
GGATACCTGGTGTAGGCGAATAGGTAGATAAGGGGCATTTGACTGCCTGG
ATGCAACTGGAAAGATCCAGGCGTTCTGTGGGATCCTAGGATTGTGGGGA
AGCATCTGCCTTTAAAAAACAGAGGCGCACTGATATGTCTCTAAACAAGT
CCAGGTCCCATGAGTCCAATCCAAGActgtttgaaatttattttaaattt
cctATTTGGAGTTACCAAAATTCTTTATGAAAATCATTTAACACAAAAct
tgatcaaatttaaaatgtaaaagCAGCAAATATATATACAGAATAGAACA
GAAAAATGAAGTGACTGCTTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTG
TAAggcaaaaaatctttgaaaattgcagataaaatctttaaaaaaacacT
TGATGATCAAGAGGCTGGCTACGTTGAATCTACAAAATTATTTGGATAGT
ATTGCCAAAAAATCTGACAAATATTACGACTAGAAAAGGGTCAGATTTTT
AAGATAGAGCGTGAGCGAGTTGGAGGACTTGAACCAACTTATTTGTGACC
CAGGCCTAGCTCAACAAAACCATGTCCCAATCAAAGATAAAGAAGAGGAA
TGTGGAATTATTTCTGCATTTCGATCAGCTATCGAAACATAGAACTATTT
CTTTAATGTGGTTTAAATTGTTTTTagtatttacattttttgtgaaattt
ctagCTTCCATTTGAAAAAGGATATCATTTTTTTTTGAGTCACAAAAGAT
ACGGAAATTACTACATAGCAGTCAGCTGTAAATAATTGGAAATAAAgtta
attaaattttcaaaatgatttagGTACAACCAAAAAGCCTGTCAAAAAAG
AAAGTTCATCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCA
AAGAAAAATGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGGTAAAAT
TTTCAGTTACAGTACACATTgctatatcaattttttttaaatatatcatT
TAGTAAGATTTTGCTGAGGCTTGgcttttcttatatttttggcCCTTTAA
GCCTCAAATTTTTCTTATCCTGTTCTCATggggtgtaattgaggtataTC
AAgcattatacccaatttttactactttgaccccaaaattagtatttttc
tTAAATATTCTAATGCTtcggcgattttgagcctcaaagtgtatacctta
ttacacaaatattactagtATTTTATTAACACAAATTGAAAAGTTTCATG
TTAATAAAAACCAGCCGTGATGTCCTTGaagaagcaaataaaatttgtgt
taattttttgcgtgttaatttcaaggtcATTGAATACTTTCCTCGTAATA
TTTGTGCAATAAGGTAATTAtattattttctggtttacagacattatgag
gaaaagttttggacaggaggatggaaaaaaaaataaaaataaaattaatg
ttttaaatttttttttagtttctttttaaaaatctgaattcaaaggaaat
aataaaataaaattttacgaaatttccTAAAGTatcaaatttttagattt
aaagacaaaagaatAAAGTGCAAGATGTTGTGTAGATTAGTTTTAGATAC
GCATCTACggataaaaacataaaaaatgtacACATAAAGACTGATATGTG
TTTATGTAAGACTGAcgtaggttcccacttaggttcccccatcccacttc
tGGTATGCCTATTTTTCTATCTACTCTTGAATTTTAACAATCACATAAAG
GACCCTGAATAAAAGCaattacaataaaaaatcaactgcGTAACACAAGA
GTTGtataatttagtttttttttatttacttgcCTAAACCTGGAAAGTAA
gacagaaaaaattaaattaaaaattaaaaaaattaaaaattgatagATAT
CTCATATAATACTCAGTACTGGGCAATACCTAGTTAATTTAACATATGGG
GTATATTTTGgggcaaaaatttaatttttgacaaTCTAATTTCACTTATT
GGATTTTGAGGAAAGTTAGCTAAAATGTTTGTTTTAACCTACAGCACCAG
CAAAGAAAGAATCAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAA
CCAAAAGCTAAAGCTGGTAAAAAGTTTAAagcctttaaattgagaaaatg
caGATTACACACACAGATCTAGGGGGTTTAAAAGATCTTTGTGAAactaa
aaaatttttgggggattttttttcattcaacaaccaaatttagaaaatta
gtATTAATAACATTATTTTGGAATAACAGACATGAAGACAATCCCATCTT
AGTCTTCTCAGGACAAATACAGCATTTTCTAGAGCACAATGTTGGTTTTA
CTACACaaataatcatatttttcttctttttttgtcaaACTGATACTTTA
CCTTTACTGCGTTTTTGCATAATCAAAGATAGAAGtgcttttttgagaga
aaaaaacagttttgaaaactaattttagGTTTTAGTACTGCCACTTGTAG
ACCTTaagtagtaagtctgcgaccgcagtcggaggcgacccgaaggctcc
tctttcgatagctgtctacccgaaggtaggggagggcgccactctttctc
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggttttttcacctt
tcaaagtctctctaagggtcggaaaaatcagaaagttttaaattagtctc
tctaagggtcggaaaattcaggaattttatgaaattttttgatttccaga
gaaaaagttgtaataaagtctctctaagggtatgacttttttcaaaaatc
gaaaaaaaacattcaaagagtctctctaagggtcaccttttcagcaaaaa
tcagtctctttaagggttgGTTTTCAGAGGTCCCATTCgtacatacccct
cattcgccaaccctagtaccccccggatgaacgttatgtacagaaaaatt
ttatcaCAACTAAAAAAGTTCTAAGATCTGCTAANNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNTTGGTATCTGGatcctgaccccccccctgaccA
AAAAGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTAAATA
TATAAAGAAAGCAGTCATAAATAGTAAAAAATTTATAAGTGATAACAAAA
CAGGCCATGTCTTAGAAAGGTAGCGTCCATTGGTGACCAAAAAGGGTACT
TTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTTAGTGAAAGGGGCAGG
ATCAGTTAATAAGTGGGCGCTAAAAAAGGGCATTAAAAATGGTCAGACAA
CAGAACACATAATTGTTCTGGGTTTCGTCGCTCAAATTGAATTGATAAAG
AGGGCGAAATGTTATCAAGATATTCTATGTTTCTTTTAAGTGCATTCTAG
ACTACTCTTACTTTTGCGGGCAGTGCAAAATGTTGTGTGGATATTTCTCA
ATGGTGTGTGATATGCTTGTTTACCAGATTTGTCTTATCTAACAACTTTT
TTGATTCAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCA
GAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAA
AGGTACAAATTAATGCAGTGATCTCCTTTAatgtttgaaaatctctttca
TATCATGTGATGCtgcaaaattttgaagattaatTTTCACATCTAGATTG
GGTTATATAACAAGAAAACATGAGTTAATACCTGCCTTATGGATCATATG
GAACAGTGTTGTTGGGCCTCCTAAAGTTTCCTGAATTGTCCTAAATTTTG
AAGCCATCTAAAATCTCCTTTGAAGGTGAAATTTTGAACATACAAGTTTC
AGAAATTTGATTGTGTTTAAACAGTAATAAATGCAAGCAAAtctctttga
ttctttttagCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTC
GGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAA
AAGGTATGATTATGTTGTTTTGGTAAGAAACTAACTTTGACCTCTATTTC
ATATAATTGATCCTGGTACATCACAAATGACTCTTTTGCTTAAGTTTCTG
TCACAACAAACTTTGGATTTAGACACTTAAAGTTTTGACACTCACATGAC
TGATTAATATTAAagtttccattttcattttaatcCATTAACATCTCTTT
CAGCTGAAAGCCGAAAGTCTGAGATAGCcttgtccaaattttcgtaatCT
TACTAAAACATTGCATTTTTTAGCCCCGGCCAAGAAAGCACCAGCTAAGA
AAGAATCAAGCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAA
GCTAAAGCAAAAGGTATAATGATCTTATTTCATATATAGGTAGTGGTTAC
TTTTTAAAGGATAGGTTCTACAGTTCAATATTCTTAGTACGCAGCTGTGT
ATTGCTTCAACATCTGATTGTACAGATTTTTctccaaatttaaatttcta
cAATTTTGAAATGAAGTTAAAGAAATTTGTTCCCTTGATGTTTTGAAGGT
CTATCTGAAATAAAAAGCTTTGCTTTGAGCATTGCAATTTTCAAATCTTG
GTTCAATTTTTTTAAGCTCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATC
AAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTA
AACCTGGTAAATAGTTTGAAACATGCCAAAGATTTATGAAACTCTAccat
ttaaagggataatcagatgggttgagatttttttgtttttactaaaagtc
aaaaacttctTGTAACATAATTACCTTTGCTTTAGAAATACTtaattaaa
aagattttgagGTTTGCTTAGGAAAATAGAAGGATTCCGCATACCAAATA
TCCCAAACCCATAGTGTGCAGTGgggtctgaccccccccccccccctttt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ccccccccccccatttataTTTCATTCCCCCTATATTTGCATTGGTTGGC
AAAcaatatcatactccaggatgcaagtcTCAAATTTTCAATCCGTTGGT
GGCTAAATAGGGCATTTTTTCCTAAGTTgttccactaaaaaggctgtttt
taccaatattttagtaatttcaggaGGGGAAGCGGCTGATAACCAGACGC
TTAAAGGGCATAAAAAATGGCCTGATAGAAAATAAGGGGAAATAAGAGAG
AGCAGACCACTTTTCATACCATTCAAGCATCTTGTAATATGATGCTGTCC
CTATGAGAACGTTAAAATTATTGTGAAAACATCCCTTTTAAGTTTTacag
gaaaaaatgtttcaaattgtCATTTAAGCTTAAAATATGGAATTTTGGCT
TTAGTGAGCATGCATTTGGTGAACctaattttgcagaatttaatttcgcg
gttttagacAAACACACAAATATTCTCATGAATAAAGAATAACctataaa
attggtctttttaggcaATAAAGgacatattttaaacaaaacatCCTCTC
AACCGCAAAATTATATTCTGCAAAACTtccgaattttgagctgtgaacca
CTAAATGAAATCCCGTGAAAATATCTTCCCTCAAGTTCATATCAAATGCT
TATTCTTTTTTAATTCAGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAA
TCAAGCTCAGAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGC
TAAAGCAAAAGGTACAAACCGAGGAAGTCctgttttgtaatattttgata
aagaaaCCAAAGTTTTCTTGTTGTCACTTTTGTGACTTCTGAATTGTAGG
TTTAGTTTCAGCTGATTTTATATTATGATTTAATATTTAGCTCCTGCCAA
AAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAG
AGAAACCTGCGAAAAAAGGTAATTTCATTAATATCCttggtctttatttt
attattagtgaggttaagtaaatcagtaaaatcacgacgacgaacgaaaa
tttaaaatttctttcaaccaatcaaaagtAATTAGCTGATTTATTTTAGC
CCCACGTTAAGTGATAGCTCCcaagtacataggtccccccaaaaaagtgg
tgtTCTTCCAGGCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggc
tgacgctatgaaGTGNAAAAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAA
GTGGTGTTCTTCCAGCCCCCTCCGTTGGGAAAAATTTCACAACCAGcagg
gggctgacgctatgaaGTGTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTT
TAACATCATGCTTTGTCATTATAAGCATGCTGTCTTAATTTATGGTGTGC
TGTTTAAGTGGAGGCATGCGTGTCACATCAAATGATTCAACatgagaaaa
aaaacgaaattctATCTTTTTTAAGCACCAAAACGAAAGAAGGATTCCTC
ATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACGTACGTAAT
ATGTCTTTAACTTAAGtgttttttcagatttggtTCATTTTCACCGGCTC
ATTTTCATGTTGAGTGACCAAGGCTTTTCTCAGGTCACGAGCTCCCCAGC
ATGTATTCTGCAATGCTTGGGTCATATCACCAGAATGTAATATTTCTAAA
ACTTGCCAACGATTTTAAGAACTTTTACGACCTTTTATTATcatagaaaa
agaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCA
ATACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTA
TCATACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGA
AATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAAT
CAAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAA
TGTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGA
TGCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTG
GAGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGC
GGCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACT
TGTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAAT
TTAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCT
AGAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGC
TCACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCG
TTTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGA
CGAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACG
TGGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTC
GTGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGC
TCCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGA
TAAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCT
CTTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGAT
GAAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAG
CTTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTA
TTTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTG
CTGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTac
gaagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAAT
TTGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTA
AGACTCATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTT
CAAACGGGCTATAATAAATAACAAtacattatttttttgtatttttttca
tggTTTTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACA
TAATACTTTAttatacatttttaatttttgtcattttttggtaaaaaaga
cATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACT
CCACTCCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTC
AGATATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaa
agaaatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagcttt
aaaaaaaattcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054162-exon-scaffold_242-1491911889:69438..69802TCONS_00054162-exon-scaffold_242-1491911889:69438..69802Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:69438..69802TCONS_00054162-exon-scaffold_242-1510915933:69438..69802Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:69438..69802TCONS_00054162-exon-scaffold_242-1575043694:69438..69802Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:70811..70930TCONS_00054162-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:70811..70930TCONS_00054162-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:70811..70930TCONS_00054162-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:75797..75889TCONS_00054162-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:75797..75889TCONS_00054162-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:75797..75889TCONS_00054162-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:76561..76650TCONS_00054162-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:76561..76650TCONS_00054162-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:76561..76650TCONS_00054162-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:76904..76993TCONS_00054162-exon-scaffold_242-1491911889:76904..76993Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:76904..76993TCONS_00054162-exon-scaffold_242-1510915933:76904..76993Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:76904..76993TCONS_00054162-exon-scaffold_242-1575043694:76904..76993Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:78006..78098TCONS_00054162-exon-scaffold_242-1491911889:78006..78098Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:78006..78098TCONS_00054162-exon-scaffold_242-1510915933:78006..78098Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:78006..78098TCONS_00054162-exon-scaffold_242-1575043694:78006..78098Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:78228..78305TCONS_00054162-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:78228..78305TCONS_00054162-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:78228..78305TCONS_00054162-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:78813..78878TCONS_00054162-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:78813..78878TCONS_00054162-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:78813..78878TCONS_00054162-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1491911889:79084..80810TCONS_00054162-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1510915933:79084..80810TCONS_00054162-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054162-exon-scaffold_242-1575043694:79084..80810TCONS_00054162-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69438..80810 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054162 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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