TCONS_00054160 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054160
Unique NameTCONS_00054160
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2568

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054160 ID=TCONS_00054160|Name=TCONS_00054160|organism=Clytia hemisphaerica|type=transcript|length=2568bp
TTTTGCCGGTGAACGAAATCTTCTTTATTAAGAATTATTTCCTTTCTCTG
CTTCATCGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTACAG
CCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTT
TTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTT
GCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaa
ttcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCA
GAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGA
CTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATG
GAAAAGTCAATGGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCA
GAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGG
AGTAGCAAATGGAAAAGCTAATGGGAAGAAAGCACCAGCAAAGAAAGAAT
CAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAA
GCTGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGA
AGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGCTC
CTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAA
GAGGAAGAGAAACCTGCGAAAAAAGCACCAAAACGAAAGAAGGATTCCTC
ATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACaaaaagaag
aaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATACA
CCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATA
CTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAAATTA
ATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAAGA
GGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTA
TAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGATGCCT
CTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGAC
CGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCG
CGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTTGTGA
AAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATTTAGT
GGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGG
TTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCACA
AAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTTAT
GCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGG
TGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTG
GATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGT
GGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAA
ACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGATAAGA
GATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAA
CGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAAC
TTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGC
TTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGG
TTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTC
TTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagt
tttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATTTGTG
TGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAAGACT
CATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTTCAAAC
GGGCTATAATAAATAACAAtacattatttttttgtatttttttcatggTT
TTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACATAATA
CTTTAttatacatttttaatttttgtcattttttggtaaaaaagacATCG
GATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCACT
CCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTCAGATA
TTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaagaaa
tactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagctttaaaaa
aaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69391..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054160 ID=TCONS_00054160|Name=TCONS_00054160|organism=Clytia hemisphaerica|type=transcript|length=11420bp|location=Sequence derived from alignment at scaffold_242:69391..80810+ (Clytia hemisphaerica)
TTTTGCCGGTGAACGAAATCTTCTTTATTAAGAATTATTTCCTTTCTCTG
CTTCATCGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTACAG
CCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTT
TTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTT
GCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaa
ttcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCA
GAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGA
CTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATG
GAAAAGTCAATGGTATGTTTTTTACATTAGATTAgacatttgatatttta
tgcCTAACATCAGAGTAACTGGGATAGGAAAAATACAGTGGGTCTCAGGG
AAGTTTAGGAAAAAGTAGCTGTAACAAAAATGACTATGCTATCAACTTTG
TTGGAATTTCACAATTTGTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGA
TACCTGGTGTAGGCGAATAGGTAGATAAGGGGCATTTGACTGCCTGGATG
CAACTGGAAAGATCCAGGCGTTCTGTGGGATCCTAGGATTGTGGGGAAGC
ATCTGCCTTTAAAAAACAGAGGCGCACTGATATGTCTCTAAACAAGTCCA
GGTCCCATGAGTCCAATCCAAGActgtttgaaatttattttaaatttcct
ATTTGGAGTTACCAAAATTCTTTATGAAAATCATTTAACACAAAActtga
tcaaatttaaaatgtaaaagCAGCAAATATATATACAGAATAGAACAGAA
AAATGAAGTGACTGCTTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAA
ggcaaaaaatctttgaaaattgcagataaaatctttaaaaaaacacTTGA
TGATCAAGAGGCTGGCTACGTTGAATCTACAAAATTATTTGGATAGTATT
GCCAAAAAATCTGACAAATATTACGACTAGAAAAGGGTCAGATTTTTAAG
ATAGAGCGTGAGCGAGTTGGAGGACTTGAACCAACTTATTTGTGACCCAG
GCCTAGCTCAACAAAACCATGTCCCAATCAAAGATAAAGAAGAGGAATGT
GGAATTATTTCTGCATTTCGATCAGCTATCGAAACATAGAACTATTTCTT
TAATGTGGTTTAAATTGTTTTTagtatttacattttttgtgaaatttcta
gCTTCCATTTGAAAAAGGATATCATTTTTTTTTGAGTCACAAAAGATACG
GAAATTACTACATAGCAGTCAGCTGTAAATAATTGGAAATAAAgttaatt
aaattttcaaaatgatttagGTACAACCAAAAAGCCTGTCAAAAAAGAAA
GTTCATCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAG
AAAAATGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGGTAAAATTTT
CAGTTACAGTACACATTgctatatcaattttttttaaatatatcatTTAG
TAAGATTTTGCTGAGGCTTGgcttttcttatatttttggcCCTTTAAGCC
TCAAATTTTTCTTATCCTGTTCTCATggggtgtaattgaggtataTCAAg
cattatacccaatttttactactttgaccccaaaattagtatttttctTA
AATATTCTAATGCTtcggcgattttgagcctcaaagtgtataccttatta
cacaaatattactagtATTTTATTAACACAAATTGAAAAGTTTCATGTTA
ATAAAAACCAGCCGTGATGTCCTTGaagaagcaaataaaatttgtgttaa
ttttttgcgtgttaatttcaaggtcATTGAATACTTTCCTCGTAATATTT
GTGCAATAAGGTAATTAtattattttctggtttacagacattatgaggaa
aagttttggacaggaggatggaaaaaaaaataaaaataaaattaatgttt
taaatttttttttagtttctttttaaaaatctgaattcaaaggaaataat
aaaataaaattttacgaaatttccTAAAGTatcaaatttttagatttaaa
gacaaaagaatAAAGTGCAAGATGTTGTGTAGATTAGTTTTAGATACGCA
TCTACggataaaaacataaaaaatgtacACATAAAGACTGATATGTGTTT
ATGTAAGACTGAcgtaggttcccacttaggttcccccatcccacttctGG
TATGCCTATTTTTCTATCTACTCTTGAATTTTAACAATCACATAAAGGAC
CCTGAATAAAAGCaattacaataaaaaatcaactgcGTAACACAAGAGTT
GtataatttagtttttttttatttacttgcCTAAACCTGGAAAGTAAgac
agaaaaaattaaattaaaaattaaaaaaattaaaaattgatagATATCTC
ATATAATACTCAGTACTGGGCAATACCTAGTTAATTTAACATATGGGGTA
TATTTTGgggcaaaaatttaatttttgacaaTCTAATTTCACTTATTGGA
TTTTGAGGAAAGTTAGCTAAAATGTTTGTTTTAACCTACAGCACCAGCAA
AGAAAGAATCAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCA
AAAGCTAAAGCTGGTAAAAAGTTTAAagcctttaaattgagaaaatgcaG
ATTACACACACAGATCTAGGGGGTTTAAAAGATCTTTGTGAAactaaaaa
atttttgggggattttttttcattcaacaaccaaatttagaaaattagtA
TTAATAACATTATTTTGGAATAACAGACATGAAGACAATCCCATCTTAGT
CTTCTCAGGACAAATACAGCATTTTCTAGAGCACAATGTTGGTTTTACTA
CACaaataatcatatttttcttctttttttgtcaaACTGATACTTTACCT
TTACTGCGTTTTTGCATAATCAAAGATAGAAGtgcttttttgagagaaaa
aaacagttttgaaaactaattttagGTTTTAGTACTGCCACTTGTAGACC
TTaagtagtaagtctgcgaccgcagtcggaggcgacccgaaggctcctct
ttcgatagctgtctacccgaaggtaggggagggcgccactctttctcNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggttttttcacctttca
aagtctctctaagggtcggaaaaatcagaaagttttaaattagtctctct
aagggtcggaaaattcaggaattttatgaaattttttgatttccagagaa
aaagttgtaataaagtctctctaagggtatgacttttttcaaaaatcgaa
aaaaaacattcaaagagtctctctaagggtcaccttttcagcaaaaatca
gtctctttaagggttgGTTTTCAGAGGTCCCATTCgtacatacccctcat
tcgccaaccctagtaccccccggatgaacgttatgtacagaaaaatttta
tcaCAACTAAAAAAGTTCTAAGATCTGCTAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTGGTATCTGGatcctgaccccccccctgaccAAAA
AGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTAAATATAT
AAAGAAAGCAGTCATAAATAGTAAAAAATTTATAAGTGATAACAAAACAG
GCCATGTCTTAGAAAGGTAGCGTCCATTGGTGACCAAAAAGGGTACTTTT
TGTAGTGTTTTACCACCAAAAAGGCTGTGTTTAGTGAAAGGGGCAGGATC
AGTTAATAAGTGGGCGCTAAAAAAGGGCATTAAAAATGGTCAGACAACAG
AACACATAATTGTTCTGGGTTTCGTCGCTCAAATTGAATTGATAAAGAGG
GCGAAATGTTATCAAGATATTCTATGTTTCTTTTAAGTGCATTCTAGACT
ACTCTTACTTTTGCGGGCAGTGCAAAATGTTGTGTGGATATTTCTCAATG
GTGTGTGATATGCTTGTTTACCAGATTTGTCTTATCTAACAACTTTTTTG
ATTCAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAA
GAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGG
TACAAATTAATGCAGTGATCTCCTTTAatgtttgaaaatctctttcaTAT
CATGTGATGCtgcaaaattttgaagattaatTTTCACATCTAGATTGGGT
TATATAACAAGAAAACATGAGTTAATACCTGCCTTATGGATCATATGGAA
CAGTGTTGTTGGGCCTCCTAAAGTTTCCTGAATTGTCCTAAATTTTGAAG
CCATCTAAAATCTCCTTTGAAGGTGAAATTTTGAACATACAAGTTTCAGA
AATTTGATTGTGTTTAAACAGTAATAAATGCAAGCAAAtctctttgattc
tttttagCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGA
AGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAG
GTATGATTATGTTGTTTTGGTAAGAAACTAACTTTGACCTCTATTTCATA
TAATTGATCCTGGTACATCACAAATGACTCTTTTGCTTAAGTTTCTGTCA
CAACAAACTTTGGATTTAGACACTTAAAGTTTTGACACTCACATGACTGA
TTAATATTAAagtttccattttcattttaatcCATTAACATCTCTTTCAG
CTGAAAGCCGAAAGTCTGAGATAGCcttgtccaaattttcgtaatCTTAC
TAAAACATTGCATTTTTTAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAG
AATCAAGCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCT
AAAGCAAAAGGTATAATGATCTTATTTCATATATAGGTAGTGGTTACTTT
TTAAAGGATAGGTTCTACAGTTCAATATTCTTAGTACGCAGCTGTGTATT
GCTTCAACATCTGATTGTACAGATTTTTctccaaatttaaatttctacAA
TTTTGAAATGAAGTTAAAGAAATTTGTTCCCTTGATGTTTTGAAGGTCTA
TCTGAAATAAAAAGCTTTGCTTTGAGCATTGCAATTTTCAAATCTTGGTT
CAATTTTTTTAAGCTCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAG
CTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAC
CTGGTAAATAGTTTGAAACATGCCAAAGATTTATGAAACTCTAccattta
aagggataatcagatgggttgagatttttttgtttttactaaaagtcaaa
aacttctTGTAACATAATTACCTTTGCTTTAGAAATACTtaattaaaaag
attttgagGTTTGCTTAGGAAAATAGAAGGATTCCGCATACCAAATATCC
CAAACCCATAGTGTGCAGTGgggtctgacccccccccccccccttttNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccc
cccccccccatttataTTTCATTCCCCCTATATTTGCATTGGTTGGCAAA
caatatcatactccaggatgcaagtcTCAAATTTTCAATCCGTTGGTGGC
TAAATAGGGCATTTTTTCCTAAGTTgttccactaaaaaggctgtttttac
caatattttagtaatttcaggaGGGGAAGCGGCTGATAACCAGACGCTTA
AAGGGCATAAAAAATGGCCTGATAGAAAATAAGGGGAAATAAGAGAGAGC
AGACCACTTTTCATACCATTCAAGCATCTTGTAATATGATGCTGTCCCTA
TGAGAACGTTAAAATTATTGTGAAAACATCCCTTTTAAGTTTTacaggaa
aaaatgtttcaaattgtCATTTAAGCTTAAAATATGGAATTTTGGCTTTA
GTGAGCATGCATTTGGTGAACctaattttgcagaatttaatttcgcggtt
ttagacAAACACACAAATATTCTCATGAATAAAGAATAACctataaaatt
ggtctttttaggcaATAAAGgacatattttaaacaaaacatCCTCTCAAC
CGCAAAATTATATTCTGCAAAACTtccgaattttgagctgtgaaccaCTA
AATGAAATCCCGTGAAAATATCTTCCCTCAAGTTCATATCAAATGCTTAT
TCTTTTTTAATTCAGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCA
AGCTCAGAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAA
AGCAAAAGGTACAAACCGAGGAAGTCctgttttgtaatattttgataaag
aaaCCAAAGTTTTCTTGTTGTCACTTTTGTGACTTCTGAATTGTAGGTTT
AGTTTCAGCTGATTTTATATTATGATTTAATATTTAGCTCCTGCCAAAAA
GAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGA
AACCTGCGAAAAAAGGTAATTTCATTAATATCCttggtctttattttatt
attagtgaggttaagtaaatcagtaaaatcacgacgacgaacgaaaattt
aaaatttctttcaaccaatcaaaagtAATTAGCTGATTTATTTTAGCCCC
ACGTTAAGTGATAGCTCCcaagtacataggtccccccaaaaaagtggtgt
TCTTCCAGGCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggctga
cgctatgaaGTGNAAAAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTG
GTGTTCTTCCAGCCCCCTCCGTTGGGAAAAATTTCACAACCAGcaggggg
ctgacgctatgaaGTGTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAA
CATCATGCTTTGTCATTATAAGCATGCTGTCTTAATTTATGGTGTGCTGT
TTAAGTGGAGGCATGCGTGTCACATCAAATGATTCAACatgagaaaaaaa
acgaaattctATCTTTTTTAAGCACCAAAACGAAAGAAGGATTCCTCATC
TGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACGTACGTAATATG
TCTTTAACTTAAGtgttttttcagatttggtTCATTTTCACCGGCTCATT
TTCATGTTGAGTGACCAAGGCTTTTCTCAGGTCACGAGCTCCCCAGCATG
TATTCTGCAATGCTTGGGTCATATCACCAGAATGTAATATTTCTAAAACT
TGCCAACGATTTTAAGAACTTTTACGACCTTTTATTATcatagaaaaaga
agaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATA
CACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCA
TACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAAAT
TAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAA
GAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGT
TATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGATGC
CTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAG
ACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGC
CGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTTGT
GAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATTTA
GTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGA
GGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCA
CAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTT
ATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGA
GGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGG
TGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTG
GTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCC
AAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGATAA
GAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTT
AACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAA
ACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTT
GCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTT
GGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTG
TCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaa
gttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATTTG
TGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAAGA
CTCATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTTCAA
ACGGGCTATAATAAATAACAAtacattatttttttgtatttttttcatgg
TTTTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACATAA
TACTTTAttatacatttttaatttttgtcattttttggtaaaaaagacAT
CGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCA
CTCCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTCAGA
TATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaaga
aatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagctttaaa
aaaaattcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054160-exon-scaffold_242-1491911889:69391..69802TCONS_00054160-exon-scaffold_242-1491911889:69391..69802Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1510915933:69391..69802TCONS_00054160-exon-scaffold_242-1510915933:69391..69802Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1575043694:69391..69802TCONS_00054160-exon-scaffold_242-1575043694:69391..69802Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1491911889:70811..70930TCONS_00054160-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1510915933:70811..70930TCONS_00054160-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1575043694:70811..70930TCONS_00054160-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1491911889:72032..72103TCONS_00054160-exon-scaffold_242-1491911889:72032..72103Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1510915933:72032..72103TCONS_00054160-exon-scaffold_242-1510915933:72032..72103Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1575043694:72032..72103TCONS_00054160-exon-scaffold_242-1575043694:72032..72103Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1491911889:75797..75889TCONS_00054160-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1510915933:75797..75889TCONS_00054160-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1575043694:75797..75889TCONS_00054160-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1491911889:78228..78305TCONS_00054160-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1510915933:78228..78305TCONS_00054160-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1575043694:78228..78305TCONS_00054160-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1491911889:78813..78878TCONS_00054160-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1510915933:78813..78878TCONS_00054160-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1575043694:78813..78878TCONS_00054160-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1491911889:79084..80810TCONS_00054160-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1510915933:79084..80810TCONS_00054160-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054160-exon-scaffold_242-1575043694:79084..80810TCONS_00054160-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69391..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	2.54623e-06	0	0	0	0	0	2.55336e-07	0	0	0	0	0.101105	0	9.58802e-09	6.88895e-09	3.09426e-08	4.39008e-08	0	3.62789e-07	0	4.37156e-10	3.36018e-05	3.78181e-07	0	1.46199e-10	0	0	2.26723e-07	5.86996e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054160 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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