TCONS_00053933 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053933
Unique NameTCONS_00053933
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4200

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053933 ID=TCONS_00053933|Name=TCONS_00053933|organism=Clytia hemisphaerica|type=transcript|length=4200bp
ACCTCTTGGAACCAATGAAATATATTTGACGTCACAACTGTAAATAATGT
CCGAACGTGGACGTTCGTTTTCAGGGGGTTGGAACCATAAAGATCGACCC
AGACCACCACGTATTGCAACTGTAAAACCAGTCTCCAAAAGTTTCTCAGA
AGCTGACCTCATGAAGTTGGACGTCAATGGTGAGCGGCCGAATATCTCAC
CGCGCGTCTTCAGTCGACTTAAAGTTCAAGATTTAGCTTGCCTCAAGAAA
GATAATCTGATCAGTGAATTAGAGAAATGCTTAGGGGAATTGGAAGAAGA
ACATGACACGACGAACAAACTGGCGGAGGTTTACGATAAAGTGGAAGGTG
AACGAAACCAACTGTTAGACGAATTGGATGTTGCTTTTCAAGATCTTCAT
GAGTACATGCAAAGACACaaagaaatggaagaacagacgaatgtCATTGA
AACAGATCGCGACGAGCTCATCCGTGAAAATGAATACCTGAAAGCTGTGC
TCTCCAATCGCACTGAAATCCATGATAGCAAGCTTGACGAAGAAAATCGT
ACGCTCAGCGAACGCGTTAAAGAGTTGGAAGAGAAAAATACGGAGCTTGT
AGATGAGATCAATAATTTGTATGAAGACCGACAAACACTTATCTCCAGTC
TCCTACATTTACGTTCTGAGGAGgttgatgacgtcatcaagcgGTCGCGT
AACAGCTCGCTCGCATCGCGTGACAGCTCCAGTGACGCTGAACGGCTTCG
CTTGTTGAGCGAGGGCGTGGACAATGATGTCGAAGCAGTGTTGGCGCTAG
ATGACGATCAAGTTAATGAACAGTGTAAAAAGATCGTTTCTGAGTTGAAC
GCGGAACGCCACGAATTGAAAGAAGCTTTCCTACGTGTGAAGAAGGAAAG
AGATTCAACGGAAAAAGAGTTGGATCAATGCAGAGAAGATAAAGACAAGT
TGGAAAATCATTATGCtgataaaataaaagaatgtaaTGACCTGGCTGAG
GAGAGAAACGAGAAGAATGTTACAATCTCGGAGTTGAAACTCGAAAAACG
AACCATTCAGCGACAACTCGATCATATGAGAGAGAACAACCGCACCATAG
CTTCTAAGCTAGAAAGCGTTGAAGAAGAGAACGACGATCTGAGAGCTAGT
CTAACTGCGATGGGAGCACAAATGGCTACGGACAACTCGCAGGACGAGGA
ATTAATCCGAGTCAAAGAAGAATTAGAggctttgaaaaaacaaactgATA
ACCCACAAAATGATGAGTTGAACCGAGTTAAAGAAGAGTTGGAGAATACT
CGGTTTGATTACGAAAAGGAGATAACTGCTTTACAAAATAGTGCTCTAGA
GCGGGAACAACAGTTGACCGAACTGCGTGAACAAGCGGAAAAAGGAAACT
TGGAGTCAGGTGATGTAGTCAAGGAGCGAGACTCCCTGAAAAAGAGCTTA
GATGATTTGAAGGTGCAGAACGAAGCGGAATCTCTTGAAAAGGAACGATT
ATCTTCTGAGTCAATGAAAGAGAAAGAGAGACTTAATACTCAACTAGGAG
AGCTTGAGAAGCTTGTTTCCAACTCTTTGAAAGAGAAAGATGAATTGAAT
TCCAAGCTAGACCAAGTGGTTTCAAGCACTGCCAAGGAGAAAGAGGAAGT
CCGTATCAAATTCGATAACCTAGTTGCCAGCTCATCGAATGAGAAACGAG
AGTTGAGTGACCAGCTAGAAGACactaaaaataaattgaaacaaGAATCA
ACCAAAAGTAAAAAAGCGAGCGAAGAAAACTCAACACTGAAACAGCAAAT
GCTACAATTAACGAACGATGTCGAAATCTCAAATAAGCAGTCGAAAAACC
GTATTAACAGTCTCGAAATCGAAGTCACAAAAGGCGTAGCTGCTAAGGAA
GCAGTCGATAAATTGTTACGGCGTAAAGAGCAGGACGTTAAATCgttgaa
aaatgaaatcgaaaatttACGAGGACAAATTTCGCAGAAAGAAAAGGATA
TACAAGCGGAATGTTTGAGTGCGAATCAAGAATTGATGCAGTCTGAGACG
CGTAAATATGACGTTTTGAAGCTCGAAAATGAGAAATTATTACAGAAACA
TCGTAGCTTAGAAACTGACCATCAGAGTATAGTTAGCGGTAAAGATTTGT
TGACACTTAAGAATCAATCTTTGGAGAACGAGCTGGCAAATTGTCGTAAT
AATTTCAATACGATGAAAATCGAGAATGAGAGACTGACGAAGAAAATACG
GCAGTCTGAACGTACGGCTGGCGAAAATAAGGACTTTCAAATGGAAAACA
AACGCTTAAAAGGTGCCAATGACGCTCTATCGCAGAGAGTTCGTGTTTTA
GAGTCGGATGAAAACCCAACGATTGTTAAAGCACGTCAGGAGGAGCGTGA
AAGATACTCCACCCTGTTGTCGAAACATGATTTGGTCAGCGCGCAGTTGA
AATCAATAACGGCAGAAAACAACACCTTGAAGGAGAAGTTACGTCATCAA
GATGGAGATCACCAACACGTGGAGGGTGTCAAACGTGAGCTCTCCATGGC
GGAGAACACAATCGAACGTTTAAACAAAGAAATCGAATctttaaaacatt
caaaaatcaaaacagagATGGAGAGCACGAGAAAAGAACAAAGCAATACG
GATGAGATTATCGCAAAATTAAATACCGAAATTGACACTTTAAAGAAAGG
GAAACTGAAAATGGAACAAGATATTAAATATTTGGTTCAAAGCCGAAAAG
AGGAAGCTGAGATTGTGTTTACGAATAAACGAACCGAGATTGAACACGAA
CGGGATACAATTAAAGCGAAATATGAACTTTTACGCGCAGAATGTGACAA
AGCGTACAAGGAGAAAGACCATTACATAATGACGATTAATACTTTACGGG
ACGAAAACGGGAAACTGCACGGCCAGATACGTAAGCAACGGTTAATCTCG
AATTCAACTCAAGATTTGATGATCCAACGACTACGAGACGAGAATCACAC
GCTTGAAAAACAATTGGAAGTCGTTCAAGACTCGTTAACGAAAACTGTCG
CTGAGAAAAAAGAACTCGTTAGTCGGCTCGGTAAAACTGACGATTCTATT
GTTACGAATATGAGAAGTTTGAAAGCGCGTAAAAACGAACTACAAATACG
CGTCAATACTTTGGAACGAGAAAAAGAACAATTGAGCCGACAATTAACCG
AATGCCGAGAAAACACGGGACAAGTCGCTAATTCACCGAAAATTAAAACT
CGGCTTGCGCATCTAGAAATGCGTGAAACCGATTTACAAGGNAAAAATTA
AAACTCGACTTGCGCATCTAGAAATGCGCGAAACTGATTTACAAGGACAG
TTAGTTTCGACACATACGAAAATTGGCGTGCTGGAAGCCGACAATGGTGA
ATTCCGCAAAAAACTTGAAGAATCAGAGAGCTTGATATACGACTTACAAC
AAGCGCTGTCACAGGCTAACGATCTAGCCATGCAGAAGAGTCTAGAGGCT
ACCAAAATACGTAAACATTTAGAATTGAAAAACGATCGTTTACTACACGA
GAATACAGATCTAAAACGAAAAGTCTTTTTCACCGGAAAAAGTGACGGAG
AGATTTCACCAACTAGCCTGTTTCCTAAATCCAACACAACTCATTTACAA
GCGGACACATCGAACTTTAAATCGCGGAAAGTCTCTTTACCAGCTTCAAT
GCATAAGAAAACTGCATTAATCCGTGATAAACCTTCATCAAGTTCAGTCA
AAGATAGCCGTTCGTTCGAATACCCGCCCTTGGATCCGATTCCGTCCATT
GGCGGAGGGCGGCGTTTGAATTCGTCATCTAGTTCAAGTCAAGTCGAGTT
GGATTTATCACAACAGTTGAGAGAACTTTTAGATTTGACGAACGATCTCA
CTAAAACTGACGATGAAGGGGCGGGCGCCCAATCTTCTGATGAATCGTTG
GCGCCCCCAGTTCCACCACCACCCGCTAACTATGAAACAGTTGACAGGAA
GAAGAGTTATGTGGAGCCGAAAATTCACGTGAGTAGTACTGATGATGACG
ATGATAAGAAACAAGAAGACTGGGTCTAATCACGTGATTAATATCGCGTC
GTGTGATTGGTAGATAAGGATGAGTTCGATCAGCGTGGGTTTTGTCACGT
GGTTAATACCTTGCGTCATATGGTTGGAAGATGAGAAGTTTGATCGGCAG
Run BLAST on NCBI

transcript from alignment at scaffold_237:247352..262711+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053933 ID=TCONS_00053933|Name=TCONS_00053933|organism=Clytia hemisphaerica|type=transcript|length=15360bp|location=Sequence derived from alignment at scaffold_237:247352..262711+ (Clytia hemisphaerica)
ACCTCTTGGAACCAATGAAATATATTTGACGTCACAACTGTAAATAATGT
CCGAACGTGGACGTTCGTTTTCAGGTAACAGTTTTATCTTCTATATATAT
AATTATATTAAACACTAGGTAGAGCTACTCTTTCTTTTCCCAAGTAAGGa
caggtgaagcaaaataatccgccatctttgctgaaagtagatCACAGTAG
GCCACAGTTtggtaccggcaatttgttcaaacaagcaaaaaaaccAAGTG
GTGCGAAGCGACGAGGCGAAAGACAGGCTTGATCGATCAAATTACCGACA
CCGAACTATTGTCTacttatcaaagatggcggattatttCGCTTCAAATA
CGGACGGAGTAGCTCAATCtaatgttttatataagatatctgtggtatCT
TCCCACTTGTCATTTTCTAACGTCTAATTTTATAAACGTTATACAGGCAG
GAAGAAATATAAACGTTATTATGACGTTCTGTACCAGCTTGGTCTGAATT
CGTGATCTAAAAATCTCACCGGGTAGAGGTTTTTTCACCTCGATTTTGAC
GAGGACAAGAACGAAACTTTCTATCACTCTTAACAAGTCtgctttgactt
tttttaattcttagcTATAAAAATGTGAATTTAGTGTGTTTCTGGGTTAT
TCGATTGTTTCGCTTGTGTCAAAACTTAAGCAGTTCTCCTTACAAAGGTC
CTATTTTTTAAGTATTGTCCCCTTTCTGCTACTCTCTGTGCATGcgacag
tagcgtagacaggggtgaaggAACATTTGCTTAGGAGAGCAGATATCAAC
GTCAGAGTAATTATGTTTTTACGAAAATGTAAGTGTTTTGTTGtgaaaat
ctgctctcctacgcagATCGTTCTTCACCTCTGTCTACGCTTCTGTGTGA
TACCAccaaaattcaagattttcactaaaacttaAGTTAGAGTAAATTGC
TTATCGCAAAAAAATGAGAGCGCCACCGTACACAACAATATCTTTCATAC
TCTATTGCATTCTAAATAAACACTAGATATTGGTCAAATAGCGTTTTGTT
CGCTCCCTGATCCGGAAGCCCTGCAAATTGCATCGAGGTAACATCTCGTG
TCGTTAATTGCCATAGGCGATGGTTCCTCGTATTATAAAAGTAAACTcag
accatagatttataaagcccggagggctagatgtcgtgctttacaAGCTT
TCGcatgcaaaaaaaagtgaatatcggaaaaaatattgttgcaaAACACG
AGAGCGCCACCGTACACAACAATATCTTTCACACTCTAGTGGATTCTAAA
TAAACACTAGATATTGGtattgctattgttttcgaaaacccgtgaagctt
ttgattggtcaagtgctgaatttctattgtaatatcacgtgacttaggta
gaatttcctacctaaccacggtacacttttcagcaaaagtacgccaAAAG
TGCCCCTCGGGCTTATAAATCTATGACTCAGACCtctaaacgtgttttta
tttgatgtttcAGGGGGTTGGAACCATAAAGATCGACCCAGACCACCACG
TATTGCAACTGTAAAACCAGTCTCCAAAAGTTTCTCAGAAGCTGACCTCA
TGAAGTTGGACGTCAATGGTGAGCGGCCGAATATCTCACCGCGCGTCTTC
AGTCGACTTAAAGTTCAAGATTTAGCTTGCCTCAAGAAAGATAATCTGAT
CAGTAAGTTTACTTTTTCCTAAACCCTTCATGAATAATTTAGTTGANAAC
Ccgtgaagcttctgattggtcaagtgctgaatttctattgtaatatcacg
tgacttaggtagaatttcctacctaaccacggtacacttttcagcaaaag
tacgccaAAAGTGCCCCTCGGGCTTATAAATCTATGACTCAGACCtctaa
acgtgtttttatttgatgtttcAGGGGGTTGGAACCATAAAGATCGACCC
AGACCACCACGTATTGCAACTGTAAAACCAGTCTCCAAAAGTTTCTCAGA
AGCTGACCTCATGAAGTTGGACGTCAATGGCGAGCGGCCGAACATCTCAC
CGCGCGTCTTCAGTCGACTTAAAGTTCAAGATTTAGCGTGCCTCAAGAAA
GATAATCTGATCagtaagtttaatttttcctaaaccCTTCATGAATAATT
TAGTTGAAGATTAATGCCTACCGTATTCCACTGATTATGAATATTTCCCC
TCAACAAGCCCAAGATTTAGATGCTAATCTATAGATTCCACAGGGGGTAT
TTTTTTGCAAGGTAATTTCTTTTTCCGTTTCTGAGTCGTCAATTACCTGT
TTAATTCTTCTGATTTGGGATAATGACAACAggaatgcccaaaacatgag
aAACTCTCTAGCTCATCCAAAGTTTCCCTTCAACGATGAGGTGAAATGCT
CAAGGGAAGAGATACCCACCACGGGGTTTATTTTGGCTCAATAACTCCAA
AGTGTTAAAACTTCTTTCGTCTCATATGGATTTTCGTCTTAATGATGtaa
ataccgagtttatgtatcggaggatattgagggcgacggtaagtgaaatc
gatacaaaacaaagtcgatagttgatgtacggctctatatcgcctttgct
cacctaaaaagacgacggtatcttggtgtttttaccgtcgtcgagcaaag
tggacggtgatttccGTCcccttcgatttatctcgaatacataaactcgc
taatgaaGAGGATTTCCCGTCTCCAAATTCTGCATGATTATCCGAAATCT
CTGGAATATGTGCTATTTTTCtatgtaaaatccattttccgtgTCAAACG
AGAAAATCCATTGGTTTGACCATTGTAACCATTGTAACATTGTAAGTCTT
TTGTCTTCAAACCACCAGGTGAATTAGAGAAATGCTTAGGGGAAGAGATA
TCCACCATAGAGGAATTTATACTAACCTTGTTAAGTTTTTTTCAAACCAC
CTAAGTTTTTTTGTCTTCAAACCACCAGGTGAATTAGAGAAATGCTTAGG
GGAATTGGAAGAAGAACATGACACGACGAACAAACTGGCGGAGGTTTACG
ATAAAGTGGAAGGTGAACGAAACCAACTGTTAGACGAATTGGATGTTGCT
TTTCAAGATCTTCATGAGTACATGCAAAGACACGTAAGGGTagctctcgg
gtacctaatagccggggggggggcgctaattaatttttcgaacattttcc
acccaggacattcttattccaacccccccgcttattgagttttgggaaaa
tgtttttgaaagttccctcttttgccctaattttgctgtattagcctcct
tttcgaacatttccacccaggacatttttattccaaccccccgattatta
aattttgagattttttccaacccccctgcttattccaaaccccctggcta
ttaggtacccgagagtagctctttttgaatttttttggagTCTAGTACGC
TAGACGAAATATCAAATTCTGTAAAAACTTCAGTGAGttagtttgcgacc
gcagtcgaggtgTCTATTCGAAGGTAGTGGAGGGCGctactcctttccct
ggatttttcACTTACCCTCCATTCTTTTAACTACTAAGCATCAACCAGAG
TGGCATAAGGTAccatttgtggaattttttaagAAGGAGTCTCCATACAT
ATGGTACTTATACCTACCTTTCTCTCTGTTAACTTTcttattttcaatga
aaacccCAGGCAGTAATGTCCAATTAGGGTTGGTTTGAGACTTCAGCCCA
AGGTCACTACCGCAGTGGTGGTGAGTTGTAATGAGCTAAAAAGGTTTTAA
AGTAATGATATTATAATtgaaatgtaaacaaagcagaaTCGTTTTCTAAA
AGGTCGCTTATCCATACTAATTGCTTTATAAATTGATCTTTTGATTGTAA
TTCAACTTAAAAGCATCGTCAATGGGTTGGTTTACCTTTTAAATAGACTT
TTAAAAACAtagacattttttttattagaacaactTTGCAGGGACGGCTC
GCGAGgttcgatttaaaaaaaagcaaatgaaTTTCAGAATGCATTAAAAC
AGGAcatagttcggaagggggtcactaACCCCTCTAGGTTCTACCCCGTT
CTACCCCCATTCAAAGTTTGATGGAACCCCCACTCAAAATAGGGGTGTCA
GAAAGATATACACTCTATTCGGAACTCTGAGTGAtgtactttttagtttt
ttaatgaaagacAACTTTTAAAATAGGGATTTCATCCCATTCCAAGACTA
CAAAACTAGAAAAATTTTGTCCAAGACTATAAAAAACTAGAAATTTAGAA
AGATGGGTTCAAAGAACATTGTTAACGCGTTAACCCTCCCTCATCCTTTT
TGAAAACTTCCCCCTTTCTACAAGAAATTCTCTTAATTATTATTACAATG
AGCCAAACCCCATGTTTGATGATCCGTCCTTCACCTTGAACTTGTAATAT
TAAGGAATTTTTAAGAGGAATGCTTATAGAAAACTTGCGTTTTATGGTTC
TGATTACTGTCTaaagttttttaatttattgatAATAGTCTAATCATGAT
TTGCGATGCTGAtgcgtacacgtttttttataagaacatctaaagttttt
gaagccttcgattgttcttagctttttgaaattaaaacgttcgaatgttc
ttaagatgttcttaattttaccattttgtgagtatttttgtgcaatttca
taagaaattgggtgttttagagtccacaaagccttaaaatgttcttaact
tgttctttaaattttggccatcgaagccttattttcttatatagtttgtt
cttataaaaaacaacgtgtattaaAAAACCTATGAATGAATTATGGACGT
TTTTTCTCTTGTGTATTATAAGGAGATGTACTTTTATATCGTTGTATATG
ATTTTTTTCCTGTTGGCGAAAACGTATATTCTGCACGataatttggatgt
tttttgtCGTAATACAATATTTTTACGAATGTGTTTTATCGATAAAGGAG
CCTTGCATCACCTTGCAGTTGGGTTTAATTCCCTTTTTTTACATTGCTAA
ATGTTTAAATGAATTTATTGTTGGAAGTTATTATTGAACGGTTTTGCATT
GGAGCAGATAAATCGCACACTTGGCAACTATGAAACAGGCAAGACTGTTA
TTTATTAATTATTGCTCgttaattttcaagaaaatatttttagagcCAAG
CCTTTTGCTTTGACACACGTATAATCGTTTCCAGTCCTTAGAATTTTCTT
TAGAGTGAGCTGTGTGAAATTGGCTATGCATTTGATAAAAAGGTTGACAA
AAATATTCCCCTTATTTCTGCAATTATGTTCTCAAAAAGTCAATGTAGAG
TTTGGGCTcaatttttgagcaaaataatTATTCACGCTTAGCCCCTCTGC
TTTCGCCATTCCTAAATATCCTGACTAGGTCGGGCACTACGTCCCTCAGG
CGACCCTTACAACTATACCCATATGTCTACAGTAGACCCTCGTTATTTCG
AACTTGTactatttgaatctttctgtaattcgaacttacTCCtagtacct
taagtggattaaatttcgcgtggattaattttcgcggttttcgcgatttt
tggccgttttcgcgaagttttgtccacgcgaaatatttaaaatctaaaaa
ttggccaaaacctctaggaaaatgaaagaaatcggatgaaaaagaggctg
attcgcgaaattttgtccacgcgaaatatttaaaatctaaaaattggcca
aaacctctaggaaaatgaaagaaatcggatgaaaaagaggctgattcgcg
aaattttgtccacgcgaaatttttagattcttgattcgcgaaaaaaagtc
cacgtgaaaatttatccacttaaggtacctGTCAAGGGGAAATATTGATC
TCATCAGCTGGGGAGTGGTATgaaatactctctgtaattcgaatctttct
cttatTCGAATAAAAGAATTTGGGtcccttaaagatcgaattagtAAGAG
TCAACTAGATATACGAGGAAATTCGTTTGATATGTTTTCGAGCGATTAAA
GGATTTCATGATATCTTTTAATCTAGTATATGTAATCGTtcgatcaaatc
aaaaaaaaagttttttcatagtattttgaaaaaagttgacaACGTTATCA
CGTATGTAACCTTTAATGTTTTAATTATGATGAAATTTGTGTGTTGGAAT
CGTGAACTATTTTTGCATCGTGGCTTTATATAACTGAAACACACTAGATT
GTTTTACATTGCCTCCATCATTATAATCTAAAGTCCCCGTTGCAAGTCAG
CCTTACAAATTATCTTTAGCCTGTGGTTTTGGGTTCCAAACTTCACTTAC
GCATCGCACCAGGGATTTTTCACTTTGTGTTGGGGCCGTTTTTGTAAACT
TAGATTAAATTTCTAATATGCCTGACAGGGAACTTGCTCGACGAAGCTGT
ATATTGATGAAGCTGGGGGTCTTGTGGGTGTTCAGAGGGCTAAGCTTAAG
CTTAAGCTTAGAATTTAAAATCCTTAGCTGAATTTACCATCACGAAATTT
GTCCCCGGAAATTGCTCCCTTCCTTCTAAGCGGAATTTGACCGAAAGAGA
ACCCCCGGTTTTGTTGCGCATGCGCTTTCAACCCCTTTGCTGTTGCACTC
TTTAAAAACACTTTCTATATCACCATTGCTTCATGGTCACGCGCATGTCT
CCTGTATTGACCACAAAATTTCCTTCAGCAATGTCTACAGTTTAATCTTT
GGATGTGATGTAACCGCTTATCGCAAATACCCTTTTATAACAAACATAAT
AATGGGTTAACCTCGAGTTTATCTTTCCTTCCAACCCGTTCAAAAATCCT
TGTTTGATGCTTTTGAATGAACCCAGCTTCATTGCTCAAAACTTAGCAGC
AATaccaatttttaagaaaactaatTTGAGCCTCTGCTATTCgaattttc
tataattcgaactaaaatattggtccctcTAGCTAGAAGTCAGTTTAAAT
TGCTCTCTATAGttcgaatttttctctaattcgaaaaaaattcttggtcc
cttgaagatcgaatacATGATTTTCcttattagcagattcatgtaacGAA
GTCACGAATAAACGTCGAGTAAAGCACTCATTGGCTGAgacatgcaaaga
ttacctccTACTTTGGATATCTtgataaaaatatgtttataTGTTAGCAC
TTTTTAGCCAATTAGAGCTTTGCTCGACGTTCTTTCGtgatttttacatg
aatctacCAATAGGAAATTTGCgtattagagagagtcaacggtattttca
aatttttacgtttttttttttcttcctacagaaagaaatggaagaacaga
cgaatgtCATTGAAACAGATCGCGACGAGCTCATCCGTGAAAATGAATAC
CTGAAAGCTGTGCTCTCCAATCGCACTGAAATCCATGATAGCAAGCTTGA
CGAAGAAAATCGTACGCTCAGCGAACGCGTTAAAGAGTTGGAAGAGAAAA
ATACGGAGCTTGTAGATGAGATCAATAATTTGTATGAAGACCGACAAACA
CTTATCTCCAGTCTCCTACATTTACGTTCTGAGGAGGTTAGTTTGTTACT
TGGAAGTATTTTTAAATCACATGATATTTTTCTTCCAATTATATTAAAAC
ATAAGCAATCTTCGCTAACAAGTTGacacaatatctttgtttcaaactcG
GAGTTTCACTGTGCTCAGGcaccaatcttcagtgaaaaaatcattttata
ataATAATCATTTGTTGGTGACGACAAAAACAGTCATGTAGGTCCAACTT
GCACAAGGCAATCGGTTGCCTACTTCACTGTCATTCTTCTTTATCCCTCT
TTTCAAAACTCGTCGTTTCTCTGCAACCAAATCCAGTGACTTGCTTTCTC
AGTTACCTCTTCTAATTCCTTTATCGACTTGTTGATTGTGCGTTTGAAGA
GGCCGATGTTGATGAGCCACATCTTCAATCTATTGCCAACGAAACCTCTG
CAGCCAACTTCTACTGAGTGATGAGTTGCGTCTCACCCTGCATCTTCGCA
CTTCTCTAGGAGCTCTTCGTAACGATCATCTTTTCGTACTTGAGCAGCAT
TGATATTGTCCTCGTGGGGAACGGTCAATTCAACTAGGAACACAACCTTC
CTTTCTGTGCACCAAACAACGATGTCAGGTTTTTTCGTAGTCGGGATGAC
GAAGGAACTCTGCTGCCCTGGTAAATCTGCTGAGATATTCCAGGTCCCTG
TCCATCTTTTGTCATCAATCATTTTCTCGGCAGGTCGAATGAAGTCTTTT
TGCCCTGGTCGTACAAATTTGATTGAACCACCGATTTTGGTCTTTTGAGG
TCTTTTGCCATTGTTTATTGCATCAAGCTGCTTTGCGGTCACATCGAACA
AGATTTTGAGTACCTCGTTGTGCCTCCAGGTGTAACGGTTGAGGGCTAGA
ACACAGTTTGACAGAATATGTTTCATTGTTCCAGTTTTTCCGCATCGACA
TGTGTCATCAGTTGCCACTTTCCATCTGACAAGGTTTGCTCGGGATGATA
ACACGTCATAAGTCGAACGAACAAGGAAGCTTAGACGTGATGTGCACCAA
TTCCAGATTTCGTTCCAGCTGATTCTTCGTTCAACAACATTCTCCTCCCA
CTTGGTCATCTGACCTTGCTGTGCACATTGAATAATGTGTAGTTCTCTTT
TTTCTGCTTCCACATCTTTGATTTGGTTGCAGACAGCAGCACGTCTTTCT
TTTCTGTTCATTGAAGCAAAGGGCTTGAAGGCGTTAACTCCAAGACCTTT
CATGTCCGATTGTGTCGATCGAACAATATTATAATGAGATTATATTATAA
TCTTCAATGAAATTTATCTGAAACTTGCTTGGAATTGTCCGTTTGGGGAA
TTATCGGTCGGTGAATTGTCCGGTCGGTGAATTTTCCGGCTAGATTGTCC
GGTCAGCGAATTATCCTGTTTGGGAGTTGCCCTGTCAGGGAATCGTCCCG
TCGGAGGATTGTTCTTTCGGGGGATTGTCCTTTCAGGGAATTGTTCAGTG
TGAAAGTTGTCAGTCTGGAATTGTCGGTCGGGAAATTTTCCGGGGTTCCT
CATACTCAGTGGCTAGATAAATTGATTACCACATGCAGGTAgaatgaatt
tatttaaactTTTCACTTTGAATAAATTCTCAAAAGAGTGGTATATTGTG
AGCTCCAGTTTTCTCCTTAAATTGCCAAATCATTTTTAACATCATATTAA
ACATTTGATTAAcaggttgatgacgtcatcaagcgGTCGCGTAACAGCTC
GCTCGCATCGCGTGACAGCTCCAGTGACGCTGAACGGCTTCGCTTGTTGA
GCGAGGGCGTGGACAATGATGTCGAAGCAGTGTTGGCGCTAGATGACGAT
CAAGTTAATGAACAGTGTAAAAAGGTAATCTTCACTTTTTATTAAGGGTA
AATTGACTCACActacgtacacgttttttatttaagaacaaactataaga
atATGAGGAttccatggccaaaattttaagaatattttacgACTTCATGG
ACtcaaacacccaaaaaaacttTGGGTGCTCTtatataaatttcattttc
aaactaGTCCTCTGTCAAATAACAAGAACAAAGACTNATGCTCTtatata
aatttcattttaaactAGTCCCCAGTCTTTGTCAAATAGCAAGAACAAAG
AATGGACAAAGAATTTCTTTCGAATTACAGACGACGAGTTGATTATTTTG
ATGAGTTTTCCATATATTGGCTGGACTTCTGTTTCTACGATCAAAAGATT
GGGACACAttggagtttttataagctcttttttaatttggttGATCGTTA
ACCTGTGATAAAACAATTTGttgctttttctaaaaaatggtCGTCTCCAT
TAATTCAAATGGCCAAtgagtgaagtatcttataaaaactcctgCTCATC
CCAAAAGATTAAAAGCGTCTTGAAAACTTGGTCAAAAACTTGTTTCATGA
TACAGTACTTTCAATGTACTTGATCTTTAAACTGCTGCATCATTCGCTCT
TTTGATTCTGCACAGGTATTTTATCCTTCTACATTTCGAGTTcgagtttc
ttttttttaatttgaaaacttttgttaATGATGGTCTTTAATAAGCTAAG
TCTTTGGAGGGTCTCCAGGCCTGTTGAATGGTTCAATCTCAATGGTTCAA
TTTTTTATAGTGTTTAAGATTCACTTCTCtttctacacgtttttctttat
aagaacaaactatataagaatataaggcttctatggccaaaattttaaga
acaagttaagaacattttaaggctttccaGACcctaaaaacattaaattt
cttaggaaaatgggtaaaaatacttacaaaattgtgaaaataagaacatg
ttaagaacattttttaggcttaaaactcaaaaaattgagaacatccgaag
gcttccaaaattttggatgttcttataaaaaaacgtgtttctcCCTTTAC
TATTCCACACCATTTGATTGGCATACTCGGAGAAGAgggttttttttact
ttgatgaTTCAGTTGACTCAccagttcgaattacagaaagattcgatttA
CAGaatttcgaattacagaaagattcgatttacagaagttcgaattaaag
agagttaACTGttatattttcaatcaaatatCCTTTTACATTTCTAGATC
GTTTCTGAGTTGAACGCGGAACGCCACGAATTGAAAGAAGCTTTCCTACG
TGTGAAGAAGGAAAGAGATTCAACGGAAAAAGAGTTGGATCAATGCAGAG
AAGATAAAGACAAGTTGGAAAATCATTATGCtgataaaataaaagaatgt
aaTGACCTGGCTGAGGTAAGTCAACTTCTGTAGGTCATCTGCTCAAACCA
CAGTAATTTCTTTAATAAACAGAGTGAACTTCTAAAGGTCATCGCTTCAA
ACCACAGTAACTTCTTTAATTAACGGAGTGAACTTCTAAAGGTCATTGCT
TCAAACTACAGTAAATTCTACAGTTAACAGGCTTGTCCCTGTGAAAATAT
TGCTTACGACCCTAGGTTTTATGGAGAATTTTCGATGCTAGAATGATTTT
AGTTTATCAAAATCTTCATCCAAAATAGGCAACTGATAAAGTTTTTGTAC
cacattttttttctaagataGACATGGCATGTTTTTTGAGTTGGGCTTTT
CGGACGACGGTAGACTAATTTTTTGAAAGAGAGAACCccaaaaattccaa
atttttaattaaaataaaaacattgcttcattctatttttaccttccaaa
aacaacaaaaatctggCGAACTCCTTTTTTTACAGACCTCCTAAGCGAAA
GCTCAAAATTGAGGAAaataccatatactaccgggccattTAATTGGGCC
ATTTAATTGGGCCATCCAGTATACCAAAAAGCCTTAAGGGAACCCTTTAT
CTAGGTTTATATCTTGCTCACGTTTTTTAAAAAGCCAGTATATCTATTCA
TGAGTCTGTTTGCTTATTCTGCAAAAACATTCcacagctccattaaaaac
gTAGACAATTCATTCCAGTTCTTATTGGACACTTTGCAGTCAAACATTTT
GAACtatctggtcattaaaatgctATACTAAAGTGAAGACATTGTAGTGT
TGAACATAATGTCAATCGGGCTTTAATCTTGATGTTTTGTAACATTACtt
tatcaattcttttgttaGGAGAGAAACGAGAAGAATGTTACAATCTCGGA
GTTGAAACTCGAAAAACGAACCATTCAGCGACAACTCGATCATATGAGAG
AGAACAACCGCACCATAGCTTCTAAGCTAGAAAGCGTTGAAGAAGAGAAC
GACGATCTGAGAGCTAGTCTAACTGCGATGGGAGCACAAATGGCTACGGA
CAACTCGCAGGACGAGGAATTAATCCGAGTCAAAGAAGAATTAGAggctt
tgaaaaaacaaactgATAACCCACAAAATGATGAGTTGAACCGAGTTAAA
GAAGAGTTGGAGAATACTCGGTTTGATTACGAAAAGGAGATAACTGCTTT
ACAAAATAGTGCTCTAGAGCGGGAACAACAGTTGACCGAACTGCGTGAAC
AAGCGGAAAAAGGAAACTTGGAGTCAGGTGATGTAGTCAAGGAGCGAGAC
TCCCTGAAAAAGAGCTTAGATGATTTGAAGGTGCAGAACGAAGCGGAATC
TCTTGAAAAGGAACGATTATCTTCTGAGTCAATGAAAGAGAAAGAGAGAC
TTAATACTCAACTAGGAGAGCTTGAGAAGCTTGTTTCCAACTCTTTGAAA
GAGAAAGATGAATTGAATTCCAAGCTAGACCAAGTGGTTTCAAGCACTGC
CAAGGAGAAAGAGGAAGTCCGTATCAAATTCGATAACCTAGTTGCCAGCT
CATCGAATGAGAAACGAGAGTTGAGTGACCAGCTAGAAGACactaaaaat
aaattgaaacaaGAATCAACCAAAAGTAAAAAAGCGAGCGAAGAAAACTC
AACACTGAAACAGCAAATGCTACAATTAACGAACGATGTCGAAATCTCAA
ATAAGCAGTCGAAAAACCGTATTAACAGTCTCGAAATCGAAGTCACAAAA
GGCGTAGCTGCTAAGGAAGCAGTCGATAAATTGTTACGGCGTAAAGAGCA
GGACGTTAAATCgttgaaaaatgaaatcgaaaatttACGAGGACAAATTT
CGCAGAAAGAAAAGGATATACAAGCGGAATGTTTGAGTGCGAATCAAGAA
TTGATGCAGTCTGAGACGCGTAAATATGACGTTTTGAAGCTCGAAAATGA
GAAATTATTACAGAAACATCGTAGCTTAGAAACTGACCATCAGAGTATAG
TTAGCGGTAAAGATTTGTTGACACTTAAGAATCAATCTTTGGAGAACGAG
CTGGCAAATTGTCGTAATAATTTCAATACGATGAAAATCGAGAATGAGAG
ACTGACGAAGAAAATACGGCAGTCTGAACGTACGGCTGGCGAAAATAAGG
ACTTTCAAATGGAAAACAAACGCTTAAAAGGTGCCAATGACGCTCTATCG
CAGAGAGTTCGTGTTTTAGAGTCGGATGAAAACCCAACGATTGTTAAAGC
ACGTCAGGAGGAGCGTGAAAGATACTCCACCCTGTTGTCGAAACATGATT
TGGTCAGCGCGCAGTTGAAATCAATAACGGCAGAAAACAACACCTTGAAG
GAGAAGTTACGTCATCAAGATGGAGATCACCAACACGTGGAGGGTGTCAA
ACGTGAGCTCTCCATGGCGGAGAACACAATCGAACGTTTAAACAAAGAAA
TCGAATctttaaaacattcaaaaatcaaaacagagATGGAGAGCACGAGA
AAAGAACAAAGCAATACGGATGAGATTATCGCAAAATTAAATACCGAAAT
TGACACTTTAAAGAAAGGGAAACTGAAAATGGAACAAGATATTAAATATT
TGGTTCAAAGCCGAAAAGAGGAAGCTGAGATTGTGTTTACGAATAAACGA
ACCGAGATTGAACACGAACGGGATACAATTAAAGCGAAATATGAACTTTT
ACGCGCAGAATGTGACAAAGCGTACAAGGAGAAAGACCATTACATAATGA
CGATTAATACTTTACGGGACGAAAACGGGAAACTGCACGGCCAGATACGT
AAGCAACGGTTAATCTCGAATTCAACTCAAGATTTGATGATCCAACGACT
ACGAGACGAGAATCACACGCTTGAAAAACAATTGGAAGTCGTTCAAGACT
CGTTAACGAAAACTGTCGCTGAGAAAAAAGAACTCGTTAGTCGGCTCGGT
AAAACTGACGATTCTATTGTTACGAATATGAGAAGTTTGAAAGCGCGTAA
AAACGAACTACAAATACGCGTCAATACTTTGGAACGAGAAAAAGAACAAT
TGAGCCGACAATTAACCGAATGCCGAGAAAACACGGGACAAGTCGCTAAT
TCACCGAAAATTAAAACTCGGCTTGCGCATCTAGAAATGCGTGAAACCGA
TTTACAAGGNAAAAATTAAAACTCGACTTGCGCATCTAGAAATGCGCGAA
ACTGATTTACAAGGACAGTTAGTTTCGACACATACGAAAATTGGCGTGCT
GGAAGCCGACAATGGTGAATTCCGCAAAAAACTTGAAGAATCAGAGAGCT
TGATATACGACTTACAACAAGCGCTGTCACAGGCTAACGATCTAGCCATG
CAGAAGAGTCTAGAGGCTACCAAAATACGTAAACATTTAGAATTGAAAAA
CGATCGTTTACTACACGAGAATACAGATCTAAAACGAAAAGTCTTTTTCA
CCGGAAAAAGTGACGGAGAGATTTCACCAACTAGCCTGTTTCCTAAATCC
AACACAACTCATTTACAAGCGGACACATCGAACTTTAAATCGCGGAAAGT
CTCTTTACCAGCTTCAATGCATAAGAAAACTGCATTAATCCGTGATAAAC
CTTCATCAAGTTCAGTCAAAGATAGCCGTTCGTTCGAATACCCGCCCTTG
GATCCGATTCCGTCCATTGGCGGAGGGCGGCGTTTGAATTCGTCATCTAG
TTCAAGTCAAGTCGAGTTGGATTTATCACAACAGTTGAGAGAACTTTTAG
ATTTGACGAACGATCTCACTAAAACTGACGATGAAGGGGCGGGCGCCCAA
TCTTCTGATGAATCGTTGGCGCCCCCAGTTCCACCACCACCCGCTAACTA
TGAAACAGTTGACAGGTATgttgtttgttttatttcttttcgGTTCTTTT
TCTGACGAAGCAAGAGGGATTAGTTTGGAAACCTTTTTGAGGTAGGATGT
GCTCATTTGACGCTACAAAAAAAACAGCACAGCAAACCTCTCATTCAGAT
TCACTTACAATTAACCGCTAGCTTTCATTAGCCGATCTCTCATATTAAAG
AACTTGAGTCATCAGAAACTCCGAAAAGCTGGAATTTGGCCCCTACTTTG
CTATTTCTAGAAACATCAGGCGTGAGATTCTTAAGTTGTTTCGGATAGGA
AAATGACAAATCTCATACCTAGAGCCACCTGCATTACTCTTTTATTCTTC
TAATAGACATGATACTTGGGAGCTACCAGAACCATAAAAAAGCAAACTAA
GGAACTGGGCTCGAGTTTGAAAGATGCCTTATCTTGACTTATTGTTTATT
TCTACAGGAAGAAGAGTTATGTGGAGCCGAAAATTCACGTGAGTAGTACT
GATGATGACGATGATAAGAAACAAGAAGACTGGGTCTAATCACGTGATTA
ATATCGCGTCGTGTGATTGGTAGATAAGGATGAGTTCGATCAGCGTGGGT
TTTGTCACGTGGTTAATACCTTGCGTCATATGGTTGGAAGATGAGAAGTT
TGATCGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034048XLOC_034048Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053933-exon-scaffold_237-1491911889:247352..247425TCONS_00053933-exon-scaffold_237-1491911889:247352..247425Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:247352..247425TCONS_00053933-exon-scaffold_237-1510915933:247352..247425Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:247352..247425TCONS_00053933-exon-scaffold_237-1575043694:247352..247425Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1491911889:248865..249053TCONS_00053933-exon-scaffold_237-1491911889:248865..249053Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:248865..249053TCONS_00053933-exon-scaffold_237-1510915933:248865..249053Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:248865..249053TCONS_00053933-exon-scaffold_237-1575043694:248865..249053Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1491911889:250330..250484TCONS_00053933-exon-scaffold_237-1491911889:250330..250484Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:250330..250484TCONS_00053933-exon-scaffold_237-1510915933:250330..250484Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:250330..250484TCONS_00053933-exon-scaffold_237-1575043694:250330..250484Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1491911889:254683..254937TCONS_00053933-exon-scaffold_237-1491911889:254683..254937Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:254683..254937TCONS_00053933-exon-scaffold_237-1510915933:254683..254937Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:254683..254937TCONS_00053933-exon-scaffold_237-1575043694:254683..254937Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1491911889:256617..256775TCONS_00053933-exon-scaffold_237-1491911889:256617..256775Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:256617..256775TCONS_00053933-exon-scaffold_237-1510915933:256617..256775Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:256617..256775TCONS_00053933-exon-scaffold_237-1575043694:256617..256775Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1491911889:258049..258216TCONS_00053933-exon-scaffold_237-1491911889:258049..258216Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:258049..258216TCONS_00053933-exon-scaffold_237-1510915933:258049..258216Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:258049..258216TCONS_00053933-exon-scaffold_237-1575043694:258049..258216Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1491911889:259070..262066TCONS_00053933-exon-scaffold_237-1491911889:259070..262066Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:259070..262066TCONS_00053933-exon-scaffold_237-1510915933:259070..262066Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:259070..262066TCONS_00053933-exon-scaffold_237-1575043694:259070..262066Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1491911889:262509..262711TCONS_00053933-exon-scaffold_237-1491911889:262509..262711Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1510915933:262509..262711TCONS_00053933-exon-scaffold_237-1510915933:262509..262711Clytia hemisphaericaexon
TCONS_00053933-exon-scaffold_237-1575043694:262509..262711TCONS_00053933-exon-scaffold_237-1575043694:262509..262711Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:247352..262711 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	4.16209e-10	0	5.19319	3.22304	2.21821	3.32723	1.46412	3.97512	0.811569	2.29033	4.35035	6.49108	0	0	0	0	2.57858e-09	0	0	0	0.000559969	0	6.73974	4.01543	2.03109e-08	0.00338053	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053933 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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