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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053913 ID=TCONS_00053913|Name=TCONS_00053913|organism=Clytia hemisphaerica|type=transcript|length=932bp
CATATTTTCACATTTCTACTTGTGTAATTATTTCTTACTGAGTCAAAATT
GAagttcttatttatttttcaattattatGTAGTATTTATTTCGTtaatt
tatcaatttcaattcaTGAATTAGATATCTAGCTATTTGCATACTTACTA
CCTTgtagtttttcttcattttaagcCCAATTTATAGATTTTCCCTGTCA
TGTTTTATTGCCACATTAATCACatatcaattttaaagaaaggCATATAA
GGTATTAAAAGAAAGCCAACGCCATTGTGCCATTCTTACATTATATTGAC
ATTTGtttattgtttatatttttcagaGTTAACTAACATATTTACAAGAA
GAGGTTTTATTATACAATTGCATTCAATCAAGGACTTCGATTTGATCTCC
CCGTTTACTATTTTGTCGTGGTGACAGGTGCGAGATTGATAAATTCTAAA
AGTGACATTGAAAACACACAAACAGTATTATTGACATTATTGGGAGTATA
AAAACAACCTCTTCTTGACAAAATGGCTGACCATTTCCGTCCACCGAAAC
AATGGTCGTTAACTGAAAATGAAACTATCACCTCCTTTGCCTTTGCAACG
ATTTTTCATCATTCCTTGAGAGAGAATGGTCACCCCAATCCGTACAAAAT
CGAGGATTAACCGATGACCCAGCTGATGCTCCTAATCGTAAGACCGCTGA
TCAGAATTGCTCACCTAGAGGACAATCTCCTAACCGTTGCTTCTGGTCTC
CACCACGATGGAGCTTTACCTACAACGGACGAAATCATGTCTCCCACCAC
CGAGAGATTGGCAGTTTACTTGTGGTTACAGCTCATCGATAGCCGCTTAC
CAGCATACGTTGCTCGAATTTATGCACACGATCTCCAATCGTACACGCTG
AAAGACATCCAACCTCGACTCTCCCAATCCAT Run BLAST on NCBI transcript from alignment at scaffold_236:32498..33429 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053913 ID=TCONS_00053913|Name=TCONS_00053913|organism=Clytia hemisphaerica|type=transcript|length=932bp|location=Sequence derived from alignment at scaffold_236:32498..33429 (Clytia hemisphaerica)
ATGGATTGGGAGAGTCGAGGTTGGATGTCTTTCAGCGTGTACGATTGGAG
ATCGTGTGCATAAATTCGAGCAACGTATGCTGGTAAGCGGCTATCGATGA
GCTGTAACCACAAGTAAACTGCCAATCTCTCGGTGGTGGGAGACATGATT
TCGTCCGTTGTAGGTAAAGCTCCATCGTGGTGGAGACCAGAAGCAACGGT
TAGGAGATTGTCCTCTAGGTGAGCAATTCTGATCAGCGGTCTTACGATTA
GGAGCATCAGCTGGGTCATCGGTTAATCCTCGATTTTGTACGGATTGGGG
TGACCATTCTCTCTCAAGGAATGATGAAAAATCGTTGCAAAGGCAAAGGA
GGTGATAGTTTCATTTTCAGTTAACGACCATTGTTTCGGTGGACGGAAAT
GGTCAGCCATTTTGTCAAGAAGAGGTTGTTTTTATACTCCCAATAATGTC
AATAATACTGTTTGTGTGTTTTCAATGTCACTTTTAGAATTTATCAATCT
CGCACCTGTCACCACGACAAAATAGTAAACGGGGAGATCAAATCGAAGTC
CTTGATTGAATGCAATTGTATAATAAAACCTCTTCTTGTAAATATGTTAG
TTAACtctgaaaaatataaacaataaaCAAATGTCAATATAATGTAAGAA
TGGCACAATGGCGTTGGCTTTCTTTTAATACCTTATATGcctttctttaa
aattgatatGTGATTAATGTGGCAATAAAACATGACAGGGAAAATCTATA
AATTGGgcttaaaatgaagaaaaactacAAGGTAGTAAGTATGCAAATAG
CTAGATATCTAATTCAtgaattgaaattgataaattaACGAAATAAATAC
TACataataattgaaaaataaataagaactTCAATTTTGACTCAGTAAGA
AATAATTACACAAGTAGAAATGTGAAAATATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053913-exon-scaffold_236-1491911889:32498..33429 | TCONS_00053913-exon-scaffold_236-1491911889:32498..33429 | Clytia hemisphaerica | exon |
| TCONS_00053913-exon-scaffold_236-1510915933:32498..33429 | TCONS_00053913-exon-scaffold_236-1510915933:32498..33429 | Clytia hemisphaerica | exon |
| TCONS_00053913-exon-scaffold_236-1575043694:32498..33429 | TCONS_00053913-exon-scaffold_236-1575043694:32498..33429 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_236 | supercontig | scaffold_236:32498..33429 . |
Blast
The following BLAST results are available for this feature:
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