TCONS_00053854 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053854
Unique NameTCONS_00053854
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1354

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053854 ID=TCONS_00053854|Name=TCONS_00053854|organism=Clytia hemisphaerica|type=transcript|length=1354bp
ACTCTATGTTAGATTTGGATGAAGATCTAAAAAAGATAGATGTAGTTGCT
GCATATGCCAGTCCTTATCATACCAACAGAAACGGTGAAGACGCTCTTTA
TATACGTGAGATATTTGACGAAAAACAGACATTCGATCATACAGATCACG
CTATTACAAAATATTTGGAACTAAATACACAGTATGGAATAAGCCAACCA
GCTTACAGCTCAAACAATGCCCAATATGGtattaaccaatcagattcaac
GCATTCTGGATTTGTCGCCCGATGTAAAACGAACCATGCGGTCGTGTCAA
CATTTAACACGTTATATAATGCTCATTTTCAAGTGATCTTTGCTTCATGT
GAAAATCTTAACAATGATACTTTTCTTGTCATCAATTTTGGTGATTTACC
AAGATTCTCAAGATTTATGCATGGTGTCTCAAATCCAGATTGCCCTTGGC
AACAgattaataaaatttctttgattcAAACGGAGAGTTATGAATTTCAA
TCAAATATTGGTGTCCCTGGACAGTTTGTGTACCCGATCACGAATCGTGA
ATGTAAATCTCCATTTACATCAACGACTACGACCACTACTACATCCTCGA
CAATTGTTTCTACACCACAAATCACTTTGCCAAAGACAACACCACCACCA
AGAACGACTGGAGCGAAACCCATATCAGAGAAAAAAACAATCTCAATAAA
TTCATCAACAAACCATCCTCTACAAACAACAACTCTTCGACCAATACCAA
CAAAATCTCCGAAAACAGCACTGCAAACAACAAAATACTATTCAAAATCA
ACCCAAAGTTTTCAACATACAACATTGGAACACATTCAAACTACACCAGA
AAAACAGGATTGCAAATTAGTCAAAAATTCAACTAATTGTCAACCGATAT
CAGCTGCCCATAAAgATATGGTTTCAAACATGGTAGCCATCACTGCACTG
GGAATCTGCTTGGTTTCTTGGAAACTTCTTTGATTTTTATCAGACAGAAG
AAATTATAATCCACCGTGGCACACAATGTTTGGTTAACATTTTTTAACGT
CGGTCTGACGTTGTATTGGCGATTTAAACTGACTGTATGGACATCAGCTG
GGCCTTATTATGACGCTTTTGTCGACTGGAGAACATTTCAAAGAATTCAC
AATATGGAACTGTCTTactatatttaaaaaatcaattgtTTGTAAGATAC
ACCTATCAAAATCGCGAGGAGACTGTTAGCGTCCACAAGGTAGAATTAAC
ATCACACGTCTGAACTCCTAAAATAATGACGGCATAAATTTTCGTTAGAG
GAGACATACCCCAGTGCGCCTTTTTTTGCTGACGGCATACCTTCCTCCAT
TTAC
Run BLAST on NCBI

protein sequence of TCONS_00053854-protein

>TCONS_00053854-protein ID=TCONS_00053854-protein|Name=TCONS_00053854-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
SMLDLDEDLKKIDVVAAYASPYHTNRNGEDALYIREIFDEKQTFDHTDHA
ITKYLELNTQYGISQPAYSSNNAQYGINQSDSTHSGFVARCKTNHAVVST
FNTLYNAHFQVIFASCENLNNDTFLVINFGDLPRFSRFMHGVSNPDCPWQ
QINKISLIQTESYEFQSNIGVPGQFVYPITNRECKSPFTSTTTTTTTSST
IVSTPQITLPKTTPPPRTTGAKPISEKKTISINSSTNHPLQTTTLRPIPT
KSPKTALQTTKYYSKSTQSFQHTTLEHIQTTPEKQDCKLVKNSTNCQPIS
AAHKDMVSNMVAITALGICLVSWKLL
Run BLAST on NCBI

transcript from alignment at scaffold_234:494318..501047-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053854 ID=TCONS_00053854|Name=TCONS_00053854|organism=Clytia hemisphaerica|type=transcript|length=6730bp|location=Sequence derived from alignment at scaffold_234:494318..501047- (Clytia hemisphaerica)
ACTCTATGTTAGATTTGGATGAAGATCTAAAAAAGATAGATGTAGTTGCT
GCATATGCCAGTCCTTATCATACCAACAGGTATTGAAAATTACCTTTGAA
TCTTTTCTCAAAACACAAAACGTGTAAATTAAAAACTATTCCTTGATCAC
AGCGACTTGTTTTGGTTTGCCTAGATCAATGAAGTATAAGCCCGAAGGGC
TAGAAGTCAATCTCTTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAG
TTGCGCGGCCTTGAGCGGCTCCCCTGGTTTTTACACAAATGACAGATTGA
AACTAAAATCTCCCGCTAAATTTCGAAAAAAAATATCAATCGTAAAGAAA
GGAATTGCTAGATTCAATGTGTCGTCAAAAATACGGCGCATTTTTTAAGG
CTTCACTTTTTCTTGCCTGAGAAAGGTTAGAGATTGAACTCTAGCCCTTC
GAGCTTTAAACTCAATGGCCTAGATATCCCAAGTGCGGCACATTTTTTAA
TTGACCGACGAGTATGTGCGGTGGTTAAGGGGATGCTTTTCAAGATAGCA
GAAATGCAATTATACTATATTTTAAGGGTGGAACTTTTGATAAATGCACT
GTAAGGGTTGAAATATTTCAGTAAATTCAGGATAGATTGCAAATTCTGAT
TCTTTTGCTCTAAAAGAGTTGAAAATTTGGGAAAAATGCACTGTAAGGGT
ATGAATTTCACCGAATTTTTGCTGCACTGTATGGACGTGATTCTATAAGC
CATTTTTTTCGCTGCGCATACCGTCAGTTGGTAAACCCACTGCCATCCCT
GGTAGAAATTGAAGCTTTAGATTTCTATATTTTAGGTTAAAAACTTGGAT
ATCATGTCAAATAAAGCAAGTTATCAATAAAATTATTTTACAAAAGATAT
TAAAAAATTTGGGACAAAGTTTTTCATCCCTTTTTAAATGATTCTATTTC
CTTCTAGAAACGGTGAAGACGCTCTTTATATACGTGAGATATTTGACGAA
AAACAGACATTCGATCATACAGATCACGCTATTACAAAATATTTGGAACT
AAATACACAGTATGGAATAAGCCAACCAGCTTACAGCTCAAACAATGCCC
AATATGGTATTAACCAATCAGATTCAACGCATTCTGGATTTGTCGCCCGA
TGTAAAACGAACCATGCGGTCGTGTCAACATTTAACACGTTATATAATGC
TCATTTTCAAGTGATCTTTGCTTCATGTGAAAATCTTAACAATGATACTT
TTCTTGTCATCAATTTTGGTGATTTACCAAGATTCTCAAGATTTATGCAT
GGTGTCTCAAATCCAGATTGCCCTTGGCAACAGATTAATAAAATTTCTTT
GATTCAAACGGAGAGTTATGAATTTCAATCAAATATTGGTGTCCCTGGAC
AGTTTGTGTACCCGATCACGAATCGTGAATGTAAATGTAAGTTAGATTTC
AAAGCCCCCAAGGGATTAGATCCGAAACTCCTAAATGAGAAATGAAGCCA
CGCTTGACCTGCATTTTTTTCAAACAAAATTTCAAAATGCAGCTTAAATC
TTAAAGACTTCACTTTTTCTTGCTTGAGAAAGGTTGAAGTTTCCTCTCTC
AAACTCAATAATTGTAAGTTTGACCAAGTTGATTAAATCCTTTTAGTCTT
CAAATATTACTTTTATAAGTAAAGTAATCTTCTTATGAATCCCTCTATGG
GAAACAATCACCGTAGCAATACAGGGTGTCCCTAATTAAAGTATCGAGTC
GAAACACAACTATAAGTAGAAAGTTTTATGTGCGTGTTCACAAAATTGTA
TTTAAGCTCCCCCTCTTTTTTCTTTGTCATTACGATTAATTTATACGTTG
TAACTACCTTTTGTCACAGGAAAAAATGTTCGATTTCCAAGGTTGGAAAT
TCGATATTTTTGGGTTGGAAATTTTTGTTTTATAATTGAAGGTTGGAAAT
TTGAGCGATTACTTTAAGCTGATTTGGAAAACGTAAATTACCCATAGGTT
TTGTAGAATAAACCAATGCGCTTGAAAAATCAAGTGAAAAAAAACAATGT
AGAAATGGCAATTTTCCAAGGCTGGTTGGAAAACATGACTTTTTGGGTGG
GAAATTTTTTTTTCCAAACAGTTTGGGAATTGATAAAAAAAGTGAAAACT
AAAAATTTAATTTTATTCATTCTTTGACGTTTCGGTGTCTTCTTTGCACC
ATGATCACAAGTATAGTAAAAAAAAAAAATCAAAACGAATTTCAATTTAC
AACATTCAAAAAATTTGGTAAATTTTGGTAAATCAAAAAGTTTGGGAATT
GAAAAAAAAGGTCAAAAATCGATGTGAAAATACATATTTTAGTAAATTTG
ATACCTCAAGTTGAAAAACTAGACTTTTTGGGTCGGAAATTTGTGTTTCT
CCCAAACAGTTTGGAAAACATTAAAAATCCATGTGGAAATTACATTTTTC
TAAGATTGAAATCCTTTGTCAAGTTGAAAAACTAGACTTTCTGGGTCGGA
AATTTGTGTTGCTCCAAAACAGTTTGGAAAACGTTAAAAATCCATGTAGA
AATTACATTTTTGTGAAATTGAAACTCTGTCGATTGGAAAACTAGACTTT
TTGGGTTAGAAATTTGTGTTTCTCCAAACAGTTTGGAAAACGTTCAAAAT
CCATGTAGAAATTACATTTTTGTGAAATTGAAGCTCTGTCGATTGGAAAA
CTAGCCTTTTTGGGTTGGAAATTCGTGTTTTTCCAAACAGTTTGGAAAAC
GTTCAAAATCCATGTAGAAATTACATTTTTGTGAAATTGAAGCTCTGTCG
ATTGGAAAACTAGCCTTTTTGGGTTGGAAATTTGTGTTTTTCCAAACAGT
TTGGAAAACGTTAAAAATCCATGTGGAAATTACGTTTTTCTAACCATTTT
CTGCGCATGTCCTTGAGAAAACCACAAGCGATTTTTCGCTCAAAACTGTT
TTGATGTATAGCTAACCTAAAAATTAGGCTATAATGTGAGCAGTCAAGCT
GTAAGTTTCCGTCAGGCGAGGCGTCTCTTCGGAGCGGCCTCGGTCAATCG
CAGTGAGTTCGCACAGTGAAGCACATAGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATCTCTTTTGCACATCTCTACCATCACTTTTTGGATTTTGG
CATTTTTCAACCTGAATTTTCGAAATTTCCAACCTTGTTTAGCTTGGATT
TTGGCTTTTTTCCTACCGAATTTACAAAAATTCCAACCTTGTATTTCGGC
TTTTTTCCACCTGGATTTTCGAAAATTCCAACCTTGATAAATTTGGATTT
TGGCTTTTTTCCAACTGAATTTTAAAAAATTCCAACCTTGTTAAATTTGG
ATTTTGGCTTTTTTCAACCTGGATTTTTGAAAATTCCAAGCCATGGAAAA
TAATTTGGATTTTGGCTTTTTTCAACCTGGATTTACGAAAATTCCAACCT
TGTTAAATTTGGATTTTTGCTTTTTTCAACCTGGATTTTCGAAAGTTCCA
ACCTTGTTTAAGCTTGGATTTTGGTGTTTTTCCAACTTAATTTTCGAAAA
TTCCAAGCCATGGAAAATGCAACATTTCCAACCTTGGACAATGTCCCACA
TTTTCAGGTTGGATTTTCCATTGGATTTTATCTTTTTTCCAACTAAGAAA
ACTTGGAATTTCCAACCTTGGACAATGTCCCACATTTTCAGGTTGGATTT
TCCATTGGATTTTATCTTTTTTCCAACTAAGAAAACTTGAAATTTCCAAC
CTTGGAAATCGAAAATTTTTTCCTGTGTGTAATAAGCCTGTGTGATGAAG
AACGTTCTTATATTTTAGCGATAACACACACAAAAACTTTTCTACTCAAT
CGCATGTTCAAACTCGACACTTTAATTAGGGACACCCTGTATTTTGGAAA
CGGTGTAAACACTACTCGTTGACGTAATTTATAAAAAGGTCCACGCGCAA
GTGTCGGCTGCTAATCAGACACGAAATTTCTGATGGATGATCCCTTGTTC
GGGAAGGGGGGATGAATGAATGAAAAGTCTATAACAATTCTTCCAAATAT
TTGTAAAAATCGAATTACTCGAGAGAATCTTAAGTTCGAACAAATCTTTA
CAGATTTAAATTTATTCAGGGAGAAAAGACACTTTTTTATTCTGCTACTG
GCAGTTTCATGCCACTTAGGTGACAATCTTCAGGCAATTATATTTGAATT
TAGAAATTTAGATTTGGTTGGCGCTCAATAAATTGACACATGATTTTTAA
AAGGAAATGCTTTTTTCTTGACCTGTGTAATAGAAATAAAGCATTCAAAG
GATTTACACTACCACTGAGATAATCCACACGAGTGCCTTATCCTTTTGAG
TAAAAGGAAAGCTGTTTGTCCTCTGTTATTTTAGTCAATGTTATGACATA
AACAAGCAATTTTTCATATATTATTTTATGGGAAATCGAAATCTATATTG
TTCCAACATAATCCACATGTTTTTGTATCATATCCTTTCCGAGGCGCGTT
CACGCTGTTCGCTTGGCGTGATTGAGACGGATAAGTAACAGTTAAATGTC
AGGTTATATTATATCCTAAATCGCAGCGTGTATGAGATATACTGCTGGTT
GAAACCAATATGAAAATATATGATAATGATATGTTTAAAAAATATTTCAA
AGTTTCAACATTCAATTTCTGCAAAATTATAGCTTTTAGATTTCATACCT
AACTACATTACCCTATTTCATAGAAAAGTAGAAAAAAACAACTGCAAAAA
TATACATTTCTAATAGACGATACCGGTTTCACATAAAAACTCAGATTTGA
CTCCCGAGAATTCCCCACAATGCTTTGTGCGGAAAAAATTTCACCGTAAA
CCTTTTTCCGCATAAAGCATTGTGGGGAATTCTCGGGGGTCAAATCTGAG
TTTTCACGTTAAGCCGATATCGTCTATTATTAGTCTATCATTTCATAGGA
CTGATGTTTTTAGATTTTTCTACGTCACTGCAGTAACCAACTATTTACGT
TAGAGCACTCTTTTGCGAATACACCTTTTCGAATTCTTTTTGGTACTTTC
TCTCATTTTGGCCGAAAAATGCCATATCTAAGGTGTGAAATAATAAAAGG
GGGCTGAAATTAGTAATCTGATGCATCTTTTTGCGGACTTTGTATTTGTA
TTTTGGCGCCCCTGTCCCCTACCACGCTTTACTGAAGATAAGGTTCATGC
GCTCAAAAGTTAGTGCCCCTATATATTCTAACACAAATTGTATCTTTTTA
AAGCTCCATTTACATCAACGACTACGACCACTACTACATCCTCGACAATT
GTTTCTACACCACAAATCACTTTGCCAAAGACAACACCACCACCAAGAAC
GACTGGAGCGAAACCCATATCAGAGAAAAAAACAATCTCAATAAATTCAT
CAACAAACCATCCTCTACAAACAACAACTCTTCGACCAATACCAACAAAA
TCTCCGAAAACAGCACTGCAAACAACAAAATACTATTCAAAATCAACCCA
AAGTTTTCAACATACAACATTGGAACACATTCAAACTACACCAGAAAAAC
AGGATTGCAAATTAGTCAAAAATTCAACTAATTGTCAACCGATATCAGCT
GCCCATAAAGGTATGTTTTATTTATTTTTACTACTACAGTGAAATAACTC
TATAACTCGAACCTCTGTAATGTCTCCTTTATTCGAACAAGTTTTTTCTT
GGTTCCTTTAAGTAACGAACCTTCTAAGTTATAGAGACTTCACTCTGCAT
TTTTTTTAATTTCAAGGGTAATTATAAGATTATAACGGGATTGTAACATT
TAAAATATTTATAGCAAGATCTAATGGTGTGTCAATAACACATTCGTCAC
AAAGCTAGTGTCCTTCCCCTCTCTCATTGTGGAAAATCAGTTAGGCCATA
ACCAAAAAGTACCGTAAAATTCAACCCACGAAAATAAAATCAAGCTGAAT
TCTCATCATACAGCAACCCTTGACTGAGTTACTGGGTCACTGAATTGTGT
ATGATACTATCATAGGGTGTAATATTTGATTACATTTTTAGATATGGTTT
CAAACATGGTAGCCATCACTGCACTGGGAATCTGCTTGGTTTCTTGGAAA
CTTCTTTGATTTTTATCAGACAGAAGAAATTATAATCCACCGTGGCACAC
AATGTTTGGTTAACATTTTTTAACGTCGGTCTGACGTTGTATTGGCGATT
TAAACTGACTGTATGGACATCAGCTGGGCCTTATTATGACGCTTTTGTCG
ACTGGAGAACATTTCAAAGAATTCACAATATGGAACTGTCTTACTATATT
TAAAAAATCAATTGTTTGTAAGATACACCTATCAAAATCGCGAGGAGACT
GTTAGCGTCCACAAGGTAGAATTAACATCACACGTCTGAACTCCTAAAAT
AATGACGGCATAAATTTTCGTTAGAGGAGACATACCCCAGTGCGCCTTTT
TTTGCTGACGGCATACCTTCCTCCATTTAC

Coding sequence (CDS) from alignment at scaffold_234:494318..501047-

>TCONS_00053854 ID=TCONS_00053854|Name=TCONS_00053854|organism=Clytia hemisphaerica|type=CDS|length=3924bp|location=Sequence derived from alignment at scaffold_234:494318..501047- (Clytia hemisphaerica)
ATATGGTTTCAAACATGGTAGCCATCACTGCACTGGGAATCTGCTTGGTT
TCTTGGAAACTTCTTTGACTCCATTTACATCAACGACTACGACCACTACT
ACATCCTCGACAATTGTTTCTACACCACAAATCACTTTGCCAAAGACAAC
ACCACCACCAAGAACGACTGGAGCGAAACCCATATCAGAGAAAAAAACAA
TCTCAATAAATTCATCAACAAACCATCCTCTACAAACAACAACTCTTCGA
CCAATACCAACAAAATCTCCGAAAACAGCACTGCAAACAACAAAATACTA
TTCAAAATCAACCCAAAGTTTTCAACATACAACATTGGAACACATTCAAA
CTACACCAGAAAAACAGGATTGCAAATTAGTCAAAAATTCAACTAATTGT
CAACCGATATCAGCTGCCCATAAAGAAACGGTGAAGACGCTCTTTATATA
CGTGAGATATTTGACGAAAAACAGACATTCGATCATACAGATCACGCTAT
TACAAAATATTTGGAACTAAATACACAGTATGGAATAAGCCAACCAGCTT
ACAGCTCAAACAATGCCCAATATGGTATTAACCAATCAGATTCAACGCAT
TCTGGATTTGTCGCCCGATGTAAAACGAACCATGCGGTCGTGTCAACATT
TAACACGTTATATAATGCTCATTTTCAAGTGATCTTTGCTTCATGTGAAA
ATCTTAACAATGATACTTTTCTTGTCATCAATTTTGGTGATTTACCAAGA
TTCTCAAGATTTATGCATGGTGTCTCAAATCCAGATTGCCCTTGGCAACA
GATTAATAAAATTTCTTTGATTCAAACGGAGAGTTATGAATTTCAATCAA
ATATTGGTGTCCCTGGACAGTTTGTGTACCCGATCACGAATCGTGAATGT
AAATTCTATGTTAGATTTGGATGAAGATCTAAAAAAGATAGATGTAGTTG
CTGCATATGCCAGTCCTTATCATACCAACAGATATGGTTTCAAACATGGT
AGCCATCACTGCACTGGGAATCTGCTTGGTTTCTTGGAAACTTCTTTGAC
TCCATTTACATCAACGACTACGACCACTACTACATCCTCGACAATTGTTT
CTACACCACAAATCACTTTGCCAAAGACAACACCACCACCAAGAACGACT
GGAGCGAAACCCATATCAGAGAAAAAAACAATCTCAATAAATTCATCAAC
AAACCATCCTCTACAAACAACAACTCTTCGACCAATACCAACAAAATCTC
CGAAAACAGCACTGCAAACAACAAAATACTATTCAAAATCAACCCAAAGT
TTTCAACATACAACATTGGAACACATTCAAACTACACCAGAAAAACAGGA
TTGCAAATTAGTCAAAAATTCAACTAATTGTCAACCGATATCAGCTGCCC
ATAAAGAAACGGTGAAGACGCTCTTTATATACGTGAGATATTTGACGAAA
AACAGACATTCGATCATACAGATCACGCTATTACAAAATATTTGGAACTA
AATACACAGTATGGAATAAGCCAACCAGCTTACAGCTCAAACAATGCCCA
ATATGGTATTAACCAATCAGATTCAACGCATTCTGGATTTGTCGCCCGAT
GTAAAACGAACCATGCGGTCGTGTCAACATTTAACACGTTATATAATGCT
CATTTTCAAGTGATCTTTGCTTCATGTGAAAATCTTAACAATGATACTTT
TCTTGTCATCAATTTTGGTGATTTACCAAGATTCTCAAGATTTATGCATG
GTGTCTCAAATCCAGATTGCCCTTGGCAACAGATTAATAAAATTTCTTTG
ATTCAAACGGAGAGTTATGAATTTCAATCAAATATTGGTGTCCCTGGACA
GTTTGTGTACCCGATCACGAATCGTGAATGTAAATTCTATGTTAGATTTG
GATGAAGATCTAAAAAAGATAGATGTAGTTGCTGCATATGCCAGTCCTTA
TCATACCAACAGATATGGTTTCAAACATGGTAGCCATCACTGCACTGGGA
ATCTGCTTGGTTTCTTGGAAACTTCTTTGACTCCATTTACATCAACGACT
ACGACCACTACTACATCCTCGACAATTGTTTCTACACCACAAATCACTTT
GCCAAAGACAACACCACCACCAAGAACGACTGGAGCGAAACCCATATCAG
AGAAAAAAACAATCTCAATAAATTCATCAACAAACCATCCTCTACAAACA
ACAACTCTTCGACCAATACCAACAAAATCTCCGAAAACAGCACTGCAAAC
AACAAAATACTATTCAAAATCAACCCAAAGTTTTCAACATACAACATTGG
AACACATTCAAACTACACCAGAAAAACAGGATTGCAAATTAGTCAAAAAT
TCAACTAATTGTCAACCGATATCAGCTGCCCATAAAGAAACGGTGAAGAC
GCTCTTTATATACGTGAGATATTTGACGAAAAACAGACATTCGATCATAC
AGATCACGCTATTACAAAATATTTGGAACTAAATACACAGTATGGAATAA
GCCAACCAGCTTACAGCTCAAACAATGCCCAATATGGTATTAACCAATCA
GATTCAACGCATTCTGGATTTGTCGCCCGATGTAAAACGAACCATGCGGT
CGTGTCAACATTTAACACGTTATATAATGCTCATTTTCAAGTGATCTTTG
CTTCATGTGAAAATCTTAACAATGATACTTTTCTTGTCATCAATTTTGGT
GATTTACCAAGATTCTCAAGATTTATGCATGGTGTCTCAAATCCAGATTG
CCCTTGGCAACAGATTAATAAAATTTCTTTGATTCAAACGGAGAGTTATG
AATTTCAATCAAATATTGGTGTCCCTGGACAGTTTGTGTACCCGATCACG
AATCGTGAATGTAAATTCTATGTTAGATTTGGATGAAGATCTAAAAAAGA
TAGATGTAGTTGCTGCATATGCCAGTCCTTATCATACCAACAGATATGGT
TTCAAACATGGTAGCCATCACTGCACTGGGAATCTGCTTGGTTTCTTGGA
AACTTCTTTGACTCCATTTACATCAACGACTACGACCACTACTACATCCT
CGACAATTGTTTCTACACCACAAATCACTTTGCCAAAGACAACACCACCA
CCAAGAACGACTGGAGCGAAACCCATATCAGAGAAAAAAACAATCTCAAT
AAATTCATCAACAAACCATCCTCTACAAACAACAACTCTTCGACCAATAC
CAACAAAATCTCCGAAAACAGCACTGCAAACAACAAAATACTATTCAAAA
TCAACCCAAAGTTTTCAACATACAACATTGGAACACATTCAAACTACACC
AGAAAAACAGGATTGCAAATTAGTCAAAAATTCAACTAATTGTCAACCGA
TATCAGCTGCCCATAAAGAAACGGTGAAGACGCTCTTTATATACGTGAGA
TATTTGACGAAAAACAGACATTCGATCATACAGATCACGCTATTACAAAA
TATTTGGAACTAAATACACAGTATGGAATAAGCCAACCAGCTTACAGCTC
AAACAATGCCCAATATGGTATTAACCAATCAGATTCAACGCATTCTGGAT
TTGTCGCCCGATGTAAAACGAACCATGCGGTCGTGTCAACATTTAACACG
TTATATAATGCTCATTTTCAAGTGATCTTTGCTTCATGTGAAAATCTTAA
CAATGATACTTTTCTTGTCATCAATTTTGGTGATTTACCAAGATTCTCAA
GATTTATGCATGGTGTCTCAAATCCAGATTGCCCTTGGCAACAGATTAAT
AAAATTTCTTTGATTCAAACGGAGAGTTATGAATTTCAATCAAATATTGG
TGTCCCTGGACAGTTTGTGTACCCGATCACGAATCGTGAATGTAAATTCT
ATGTTAGATTTGGATGAAGATCTAAAAAAGATAGATGTAGTTGCTGCATA
TGCCAGTCCTTATCATACCAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033984XLOC_033984Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053854-exon-scaffold_234-1575043694:500969..501047TCONS_00053854-exon-scaffold_234-1575043694:500969..501047Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1575043694:499612..500090TCONS_00053854-exon-scaffold_234-1575043694:499612..500090Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1575043694:495188..495544TCONS_00053854-exon-scaffold_234-1575043694:495188..495544Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1575043694:494318..494756TCONS_00053854-exon-scaffold_234-1575043694:494318..494756Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1510915933:500969..501047TCONS_00053854-exon-scaffold_234-1510915933:500969..501047Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1510915933:499612..500090TCONS_00053854-exon-scaffold_234-1510915933:499612..500090Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1510915933:495188..495544TCONS_00053854-exon-scaffold_234-1510915933:495188..495544Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1510915933:494318..494756TCONS_00053854-exon-scaffold_234-1510915933:494318..494756Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1491911889:500969..501047TCONS_00053854-exon-scaffold_234-1491911889:500969..501047Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1491911889:499612..500090TCONS_00053854-exon-scaffold_234-1491911889:499612..500090Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1491911889:495188..495544TCONS_00053854-exon-scaffold_234-1491911889:495188..495544Clytia hemisphaericaexon
TCONS_00053854-exon-scaffold_234-1491911889:494318..494756TCONS_00053854-exon-scaffold_234-1491911889:494318..494756Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053854-proteinTCONS_00053854-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:494318..501047 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.154925	0.271937	0.105248	0.034323	0.292494	0.363209	0.19918	0.484822	0.0522208	0.129368	0.0941757	0.0206358	0.680034	0.385212	0.0527828	0.188813	0.441945	0.786754	2.37151	2.99862	0.89874	1.27128	0.461847	1.09816	2.72791	2.85025	0.084973	0.136028	0.206345	0.0700777
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053854 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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