TCONS_00053663 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053663
Unique NameTCONS_00053663
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1538

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053663 ID=TCONS_00053663|Name=TCONS_00053663|organism=Clytia hemisphaerica|type=transcript|length=1538bp
GAATTTTCTCACTGAAGAGTCTAGTTCATATAGAAAAATCGGTTCGAGAT
GAAAGTTTCATTGGCAATAGTACCAGTGCTTTTATTGATCATTAGAAATG
TCACTTTTTCACTTGcagaaaacttttcattttgtgTAGACAAGACTCGC
ATCATTGTTGTTTGGCAGCCACTCGTAATGTATAAAGTGTTGGTCCGTGC
TGACAATGTTAATCCTGTCGAAGTTTATCCTAGAAATGAGTGGCTTAAAT
TCTTTGACATGTTATTGAGAGAATTCCACACTGATGAATGTtatgaaata
tgtttttatGATCAGCTGGAACAGAAAGTAATGAACGTCCGAGATTCTAA
AGATTTGGTTCCAAAGGTTCTTGATCAATATTACAATGACCTCATCACGA
TTAATCTAGACGAACCTAACCAATTCATCCAGCAACGTCCTCAGGTGAAG
GATCCTATTAAGGACCCTGTCTACCCTATTGGCTCTCACAAATTCTTTGA
GGAAGAGCTGAGAAGAAATACTAAGGGAATGCGTAATGTTGTTTTGTATA
TCGCTGGCTACTCAATCGACGATAAAACAACAGATGCTTTATCAAagctt
caaaacaaaaaacaatatgCAATCATCCTATTGTCAATGGTCATGTATGC
TCCAAACTTCACTTGGCTTTCAACCCAGCGCCGAAACTTGTGGTACCATC
TTGGCAGGCATATGGAACAATTCGATGACGTAAGAAACACTAAGGGAACG
CATAATGTCGTTTTGTATATCGCTGGTCACTCAATCGACGATAAAACAAC
AGATGCTTTATCAAagcttcaaaacaaaaaacaatatgCAATCATCCTAT
TGTCAATGGTTATGTATCCTCCAAACTTCACTTGGCTTTCAACCCAGCGT
CGAAACTTGTGGTACCATCTTGGCAGGCATATGGAACAATTTGATGACGT
AAGAAACATATTACGTAATCCTGACTACAAAGGAACTGAACTAGGGATAA
CAGAAAATTCAATAAATACGACTTGTTTGGAGAAAAATCAACTTGATATC
AGTTTTATAATCACCGAAGGAGCGTCAAGTGATTTCAAAGATGGAATTGA
CGTTAGGAAAGTGTTTGATTTTATTGAGAGCTTAAATGACACTTTGCGGT
TGACCGGTGTTTCGTTCAACGTCAAGATACACCACGTGACTCGTGTTGAA
AATCCTTATAAAACTATGTATCATTCATACCACTGggttttgaagcaaaa
aaaacGACATATTAATTACGATattcaaactttcaattttgATGATATTA
AAAGAAACTGTAGAGTAAACTATGTTTGTAACACTACAAGAAAAAAAAGG
CATACACCACCTTCTCTTCCTTGTGAAGAAAAGTTAGAATGCTTTGGCAA
TAATAGAAGGCTCACGGAGAGAGAATTGAAGATAGTAAAAGAAAAAGGTC
TGTACGGCCCATTTATCATACCCCTTGTGAAGAAAATACAGTTTGCTTTT
CCGATAGTAACGAAAAGAGAATTGCTGAGAATATAtaa
Run BLAST on NCBI

protein sequence of TCONS_00053663-protein

>TCONS_00053663-protein ID=TCONS_00053663-protein|Name=TCONS_00053663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MKVSLAIVPVLLLIIRNVTFSLAENFSFCVDKTRIIVVWQPLVMYKVLVR
ADNVNPVEVYPRNEWLKFFDMLLREFHTDECYEICFYDQLEQKVMNVRDS
KDLVPKVLDQYYNDLITINLDEPNQFIQQRPQVKDPIKDPVYPIGSHKFF
EEELRRNTKGMRNVVLYIAGYSIDDKTTDALSKLQNKKQYAIILLSMVMY
APNFTWLSTQRRNLWYHLGRHMEQFDDVRNTKGTHNVVLYIAGHSIDDKT
TDALSKLQNKKQYAIILLSMVMYPPNFTWLSTQRRNLWYHLGRHMEQFDD
VRNILRNPDYKGTELGITENSINTTCLEKNQLDISFIITEGASSDFKDGI
DVRKVFDFIESLNDTLRLTGVSFNVKIHHVTRVENPYKTMYHSYHWVLKQ
KKRHINYDIQTFNFDDIKRNCRVNYVCNTTRKKRHTPPSLPCEEKLECFG
NNRRLTERELKIVKEKGLYGPFIIPLVKKIQFAFPIVTKRELLRIY
Run BLAST on NCBI

transcript from alignment at scaffold_233:502744..517965-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053663 ID=TCONS_00053663|Name=TCONS_00053663|organism=Clytia hemisphaerica|type=transcript|length=15222bp|location=Sequence derived from alignment at scaffold_233:502744..517965- (Clytia hemisphaerica)
GAATTTTCTCACTGAAGAGTCTAGTTCATATAGAAAAATCGGTTCGAGAT
GAAAGTTTCATTGGCAATAGTACCAGTGCTTTTATTGATCATTAGAAATG
TCACTTTTTCACTTGCAGAAAACTTTTCATTTTGTGTAGACAAGACTCGC
ATCATTGTTGTTTGGCAGCCACTCGTAATGTATAAAGTGTTGGTCCGTGC
TGACAATGTTAATCCTGTCGAAGTTTATCCTAGAAATGAGTGGCTTAAAT
TCTTTGACATGTTATTGAGAGAATTCCACACTGATGAATGTTATGAAATA
TGTTTTTATGATCAGCTGGAACAGAAAGTAATGAACGTCCGAGATTCTAA
AGATTTGGTTCCAAAGGTTCTTGATCAATATTACAATGACCTCATCACGA
TTAATCTAGACGAACCTAACCAATTCATCCAGCAACGTCCTCAGGTGAAG
GATCCTATTAAGGACCCTGTCTACCCTATTGGCTCTCACAAATTCTTTGA
GGAAGAGCTGAGAAGAAATACTAAGGGAATGCGTAATGTTGTTTTGTATA
TCGCTGGCTACTCAATCGACGATAAAACAACAGATGCTTTATCAAAGCTT
CAAAACAAAAAACAATATGCAATCATCCTATTGTCAATGGTCATGTATGC
TCCAAACTTCACTTGGCTTTCAACCCAGCGCCGAAACTTGTGGTACCATC
TTGGCAGGCATATGGAACAATTCGATGACGTAAGAAACATATTACGTAAT
CCTGACTACAAAGGAACTGAACTAGGGATAACAGAAAATCCGATAAATAC
AACTTGTTTGGAGAAAAATCAACTTAATATCAATTTTATAATCACCGAAG
GAGTGTTGAGTGATTTCAAAGATGGAATTGACGTTAGGAAAGTGTTTGAT
TTTATTGAGAGCTTAAATGACACTTTGCAGTTGATTGGTGTTTCGTTAAA
CGTGAAGATACACCACGTGACTCGTGTGGAAAATCCTTATAGAGGTATAT
ATCATTCATACAACTGGGTTGTGAACCACAAAAAAGGAGATATTAATTAT
GATATTCAAACTTTCAATTTTGATGATATTGAGCCAGCTGAGCCTGAAAC
AATCTATATGTTATATAATAGAACAAGGAAAGGTTGTATTACTATAGGAT
GGAAAAGGCGTAGTAAAGATACCATTACATTAAAGATTCCCATTACTAAT
TTGATGCCCACGAAGAGAGAATTGGTGAGAGTGCTAGAAATAACCCCAAA
ATCAAATCAACTGAAGAATGCCGTCTTTGATGATAAAATGATCAACATTA
TTATAACAGACACCATTGATAACTCGAACCCAGCCTTCACAGCTCTCAAA
ACGCCAAAAGCTGTTAAAATTCACGTCGTCGATAAAGAGAAATTCAATCC
CAGTATGACCTATAACGATGTTATTCAAACACCGCGCACAGATTTCACGT
CGAAGCAGTTTCATGATCACTTTTTTGAGCAACTCAATGAAGAAGTTGAA
CGTTTAATTTCTGAAAGAAATTATTGTATCCGACAAGGCAAGTAGATGAT
AAAAACTCCGCGATATATAAAGTATTATTTTCAAATTATGTTTGTCGTTG
TCTGCGTTGTCTATACAAACGGGATGAAATCCTTTTACTCTCGATTTTTT
TTGTATATTAGAAAGAGTTTGCAAAGCTTGACCTTCCCAGCAAGAGAAAT
TTGAAGAGAGTAAAACAAGGGAAAATATCTCAANAAGTGGTAATAGTGCA
ATTAACGATTAATTGCACTCCTCTAAACCAATCAGATTCGAGTAATTTTG
CACGGCTGACGATTAGGTTGAATAATGTCAGTAAATGATTAGAATATTTT
TTTATAAAATTATCCTTGGCCTTTCCAACGATGAAATTTTCAGAATCTTA
AAGAACATAATTTAATGTATTTCCTGCCGCCATTTCCTTGCCAAAGTATT
ATTTTTTAAACTCTCCCCTCCTCGCAATTTTTGAGAAATTCTATTGTTAA
TTAAGCCTTGTCAGCATAAGAAACACATCTCCTTTCTAATCACGAAATAT
AAATTTAAGCGTTAGATTAGAATAATTTGGAAGAAAAATTGACAAACTTT
GTAAAAGTGTGAACTCTTATCAATCACAGATATCTATATATTAATAGCGC
TAGTCTGTATGTCGTTTTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
GTCTGTGCTACTTTCGTTTTCTTCGTACGCAATGTTTTTGTTCTTTTAAA
AGATGACTTTTGCTTCTTGCTCCACAAATGTGGTAAATCAGATTCGCGCC
GTTTTATAAAGACTTTGGGACGTGGGACGGTGGCTCAGGTGGGACGCTTA
AGTGGGATGATGCTGGGACGTTCAGGTGGGACGATGCTGGGACACTCAGG
TGGGACGCTCAGGTGGGACGCTCAAGTGGGGCGATGGTGGAACACTCAGG
TGGGACGATGCTGGGACGCTCTTTCATGTTGTCGCTTTAATATTCTTGGC
TCCGAGAAAACCCAGGTGCGATTTATTGATTGATTCATTCATTCATGAAA
CTTAAAAAAAGGTCTTCAAAAAAATTCAGGATATTTCAAAGATGAGGTTT
TTTATAAGAACATTAAGGCTAAAATCGAGTTACTCGATCACCATAAATTT
TGACATCTTTTTTGACTTTTGACATCTGGGGGCAATTGTCCAGGGGGGAA
TTGTCTGGGGGGGGGCAATTGTCCTGGGGGCAATTGTCCAGGGGGGAATT
GTCTGGGGGGGGGCAATTGTCCTGGGGGCAATTGTCCAGGGGGGAATTGT
CTGGGGGGGGGCAATTGTCCTGGGGGCAATTGTCCAGGGGGGAATTGTCT
GGGGGGGGGCAATTGTCCTGGGGGCAATTGTCCGGGGGGGGCAATTGTCT
GGGGGGAATTGTCCCGGGGGCAATTATCCGGGGGGCAATTATCCTAGAAC
CAAATCAATAAACACTTTGTATGAAGAATGGACGATCAAGTTTCTTGGGA
CAACACTGAAAAAACAAAGCCAGCCTTCAACAATCCTAGGAAAAAAGACT
TTCAAAATAAATATCGTTTAATGACAAGAAACTCTACCGAAGCAGTTTTT
GAAAAAGTCAATTTACCACAAACTATATGTTTGTAGGGGGCCTTTAATAT
AGCATTATTTTAGCGAAATTTTATGATTTTCGCAAAAGTGAATGCTCGTG
AAAAATTCTTGACAAAATCGAAAATCTGTAAAACTTCTATCTTAAATTAA
AATGCGTAACATTTATGAAATTTTTCAGGCTGTTAAAGACTCATAAGTCA
AGAAGAATTTTTTCGTGTCAAAATTTCATATTTTCAATTTCACTTTTTAC
TCATGGGAAAGTTTGTATTTGATTTTTTTAAACGACTTTATTTTGTCCTT
TGTGTTTATTCGTTAACATTTTTCTGATCCAGTTTATTTAGATTTTATGC
AATTTTGTGAATTCTTAAAGCATTGTACTATATGGAATTTCTTGATAATT
TTAAGGGGTAAAAAGATCTCTTTCATTGGGAGCCCAAAATAGGAAATCTT
TGTGGCTTTCCTCCCCTTTTTACACCCATCTAAATTTCGTTCCAAGACCA
GAAATGCCAATATGGGTTGCCGTAAAATCGACTGATAAAGTCATACTCCT
GGGAGGGGGACAATCGATCTGAAATCTACCTTGCTTGCGGGTAAAAATTA
GGATTCCAAAATTGGGAACAAGCAATTTATTTTAAAGATTTCAGTATTTG
AGCAATATACATTAATAATTAAATAATTTAAAATACTGTATTACCATTAG
GTTGAAAATGTTTTAAAAAAACTCCCTGATTTGAACACTTGTCTGGTAAA
CAAAGAGCGATCATAGAACGGTTTTAGAACAAGAGAAAACACTTCTAATT
AAAAACAAGAGCCGCAAAGATGCGGATAAATATTTCCTTTACAAATGTTA
AAATAATAATTGATGCCCTCAAAAGATTTCAAAGTGCTTTAAATCTCAGA
TAACATCAAGCAACATCAAGTCCCTATGAATTTCAAAATTCCATTTATGT
TATTGAGAGTATTTACAGGATTATTCATAAGATGACTGTAGGTTCAAAGC
TACGGATCACGGAATATATACGAGCTGAACCCGACTGAGAACAACAATGC
AGTAATCAAATTGGCTGGAACTTTAATTTTCGTTAGGTGTACTTTAAATG
GATTTTAGTATTATACTAGCGGTCAACCGGCGTCGCACCGCCAAGTAGAG
TGTTGCGTTGAACACATCAAAAGACCTGATTATATAATTATTATTTTAAG
CGCTGATTTCCAGAAATATTATATAGCCAAAAAGGGCAAATATGTAAAAT
GAAAGAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCAAAAGACCTGATTATATAATTATTATTTTAAGCGCTGATTTCCAG
AAATATTATATAGCCAAAAAGGGCAAATATGTAAAATGAAAGAATGACAA
AAAGTAGAATATTTCACAGTAAGAAAACCAAAGAAAATTTTATATATTTT
CAAAATGAGATGAAATATTTTGCATTATACTATCATATATATAATATTGT
AAAAAATGTAAAAAATTAAAGTAACTTTTGGAGTTTTTTGAAATAATGTA
CGTGCTAAAAAGTAAAAATCTTTCAAAACAGGGTTAAACAATTTCATATT
TTACGACAGAATGCANTGATGGAAAATAGTAAGAAACTTAAGTTTACAAG
TGGCATTTAGTTTTTGCTGGCTTATAGAATGGCAGGATCCTGGATGGTTT
CCCTAACTGTACATGTGTGATGTGAGGTGATTTCAAATTATTTACATCCA
TATTCAATGCAATAAACCTTTTAAACAAGTATAACATAACATTCTTCATA
TTTGGGCCTTGTGTGTTCCGGATCCGGTTATCAGCTTTAAAATTTGAAAT
TTATAACCGCAACGAGTTTTCACTAACTGTCACTAACCCCAGCAGTTAAT
TCATTNTTGCAAAAGATCTCTAAATTCACAACTAAAGTTTTCCACGTTTT
AAAATGCACGCGGGGAAGAGAATCTCCAAGTTCAAGAAAAATTTTAATTG
TATATACATCAGTTAGGAACATTTGGCGAGTTCCTCTACGCGACCGCGAT
CTAAAAAATCATAACAACACTCATTAAAAAATGGCGTTCGTGTCTTTTCG
CACTTTTTTTACNTCAATCATTAACCAGTCAATTTTGCTCCATGTTTAAA
TTTTTAGCTAAAATCAGTTCATCAACCATTCCCATTGTTGCATTGTTGGC
ATTGCGCTGCATTCGTTGGGTGAAAACTTTTTTCATATTGCAAGTAGTAA
TTTTTCAGGTATAACATGGTCAGATTTATTCAAAGTCCCTTGCCTTTGTA
CGATTCATGTAAATATACAAACANTGAAGTTTTTTTTTGCGTCGGAAATT
TTTTTTCAAACTTTCAGCAATGATTGACCAAACTGTTACAATGAAAATTA
TCCAGCGCATTTTTTATCTTCTTATCTTCTTGATATTCAATAAAGCACTC
AAAGTTTAATGAATTTAATCACAGAAGATATTCTTATAATTATTGATATT
CACTAAAACACCGTTCGTTGTGCGCTGCGGTGGAGTGTATGACGTAACTC
GCGCGGTAACTAACTCGCTTTATGTNNNNNNNNAAAGGAATATTAAGAAA
AGTTCACTATCGACCATTCCTTGTGACAATCGTACAAAAATCATGATCCA
ATTCAAGCAAAGAAAAGTAGCGAAAGAGCAAAAGTTGTTGCCTATTTCTG
CCATCTTTGTTTTGACAGTTAGAAACAGAGCAGTATGGTCCGATCAACAA
TACGCTTCTGAAACGGCCGACGTTGCCCGATCGACAAGGAGAATAGAGCG
CCGTACCGATATTTACCACAGACGTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATGACGT
CTTCCGCCTCGAAAAAAGAACATCATACTGTTTTTACCGCCGGAGCTTGA
TTTAAAAAGAGACTCATGTACAAACTCACGAAATTGACCAAAAGCGAGCG
TTAGACTTGGAGAAGGAGAAGGAGAAGAAGGAGAAGAAATTTTACCGTTT
TAACAAATATTTCCTATATAGATAGGAAATATTTAACAAGGCGTTTTGAT
TTAACATTATAACACCCCTGTCTCGCAGCCACAGTGGATTTCCATTGCAT
TTTAAATAGGGATAAAAATCAATGTTTAGAAAAAGGGGTTACGCGCGCTC
CAGAACGCTTAAGTACGTTCCTCCACTCTGTTTGCGTTGCAAATAATATT
GAGGTAATCCAGGATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAGTGTAGAGTCTTGAGAAGCACTAGTGA
AAGGTGAAAACAACAGCTTTTTAATTGGATATTCTTTTTCCGGGAAATCT
GTTAGACAAAACTAGAGTGCCTTTTCTCGATAAATATGTCGGGGGAAAGT
GACGAAAATTATAAGAATTAAGGCGACGACATTTTTCCTAGTTGAAAAAA
CTTTTATTTACCTGTTTTTTTTATCCCCAGCCGAAAATTTTACAACAGCC
TCGGGCTCTATAAAGTCCAAAATATCTGAAAAACACATTGGCCAAAGGGA
ATGTAAAAAGAAATTCCAAAATACCAAAATTCTAAAAATTTAAAAAAATC
CCGAAAATCGAGTATATATATTGCACCGGCCCAGGGAGCGGGGGTACCTT
TTTTCACCTTCACGAGTCCCAGGTAAATGCCGCAAAAACACATTTCAGTC
CCATTCAGGTTAGACTGGAGTCGTTTATAATGCGTGTAATACTAATAATA
CCAATACACGTTTTTTTTATAAGGAACCTTAACTTTGCTCTGAGCCTGAG
CCTTATTTTTACAGAGAATTTAAGCCTCAAAGTTCCTTATCGAGTGCCTT
ATTTAGATAGCTGCTACAATTAAGGTCATAATATATTGAGAATTTTGGTT
ATTTTAACGTTTTTCAAGATTTAAAGTTCTGGTGAGAAAGTCGATTTTTG
GCTATCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCTACCCTTCCAACCTACTTTAGAGCACTTACAAATCGA
TTGTGGTTCAAAAACTTCCCGGTGGATTTCCCTTTTTTCTCAAATATTAT
GACCTTGATTGTAAGTTTGGATAACTATCTCTTACTGTTCCTTAAAACTT
GTTTTCTTATTCTCAGCCTGAGCAGTTCCTAAACAATTCCTTATTTTTTG
GACCATTTCAGCCTCGAGTTCCTTATAAACGTGTTCCTTATATAAAAAAA
ACGTGTACTAATGATAATAATACGAGATTTAGTTTGTATAAACGACTGGA
AGAATCCGGTGTTCCAGCCTTATAGATACCCCGGCTAGCTACGCAGAAAC
TTGCGTAGCGAGAAAACAATTTATCAAGCAATTCATGGTATTCATGGCGT
AATGTTTTCTTCTACGGAAAGACCCCAGTTTTTGCCAGTAGTGGAAAGTT
TTATACAACTTTTGTCTAGTTTAAAAGTGCCACTACTGGCTAAAACCGGG
GTATTTCCGTAGAAAACATTACGTCATGAATATCATGAATAACAAACTCT
CAAAACAAAATCAACTCAAATGAAAAACTTTCAATACACACACACATTTT
TTTTTCAAGATTTTTTTTGAGCGGGAACAAATTATAATTGCAATATTGAC
ACTTTTCTTTTGTTTGGAGTTAGTGCACAAAGGTTTCTAGACGACTAAAA
TTGTTCCCTTCATTACTTTTTGCTTTATTTATACTATGTATAAATTGGTC
GTCTAGCTTGCTAGACTACATTCAGGTCGCTATTTTTTTCAAAAGCGAGT
CCCATGAACGAAGAGTCAATTTTTTCGAACCTCTCGCTGAGAGAGCGGAG
CAGCCCTTTTACCAACCTCGTTCCCTGCGTATTATCAGCTTTTTTATGCT
TTACTGATAGCGCCCTTTTACTTCCGCCTTGTAGTTTCGAATGTTTTTAT
TCGAAAATCTAATTCGAACGTTATAGATTCGAACAAAAATATTCGATTTT
AGTGTTTGCATCTTTTGATCCAATCCAATCCACAGCAAGCTGATGTGCTG
GCAAGGCAAGACGCAAGAAGAGAAAGTTTTTTGTTGGTAGGCAATAGCAA
CCGGTCCAAATAAATAAACGCGCGGGAAAACNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGTTCTTT
TGCTGCGACATGAGGATTTAGTTTCGAAAGCGATGCGATCTGAGGAAACA
CGAGAATTTGGTGTCATGTAGTCATACACGAACACTGAATTTTTCAAAAA
TGTTTAGCCATATAGGGACCAATTTAGTATATCGCGCGCACTTTACCAAA
CGAGATACGCGCTGCGCGCGCAATTATCCATTCAAAGTTCACAGAAATTC
TCTTGATGATGGTAACTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCAATCCTTTCCTTAAAATC
GGAGGTAAGAAAATCTTTCAAAGCTCTCATATCAAGTATCTAGGTATATT
GATTGACTCTCACCTCAACTGGAAAGCTCACACCACTTTTCTGTCATCAA
AACTTGCACGAGCCAATGGTATTATATCAAAACTCAGGCACTATGTTTCA
ACAATNTATGTTGATTGACTCTCACCTCAACTGGAAAGCACACACCACCT
TTCTGTCATCAAAACTTGCACGAGCCAATGGTATAATATCGAAGCTCAGG
CATTATGTTTCAACAAAAACCATTATTAATATATACTATGCTCTTTCAGG
CTCTTTTCCATTCTCATTTACAATATGGTTGCCAACTATGGGGTCTCACT
GATAGTACTACATCAAAACCTATCTTTATTCTTCAAAAGAAAGCCTTACG
TCTCATGATCTTTAATAACTCTCAATGCCCTTCTTCTCCACTTTTTTCAG
ATCTTAAAATTCTCAAAATCTTCGACCTTGTCAGATGCCTTAATATTTCT
TTTGTTCACAAATTCTTGAACAACAGATTACCTTTCGATCTCCTGCAATC
TTTTAACTTCATTCAGCTTGATGCTGATGGTGATGATAATCATGGTACCA
GAGGAGCAAAATTGAAACTTATTTTTGTTCCTTCCTTTAACACTATAACT
TTTGGTAACAAATCATTTACTAAAATCTGCATAACACAATGGAATTGTTT
ACAGCGATCATACCCTGATATAACCTTGAGCTCATCTGATTATGATTTCA
TTAAATCTCTTGCCTTCACTCACTGTATTGGGGAATACTGAGCACACCCC
CTCCCCAACCAAGAAAGCAAAAATAAAATAAAAATTTATTCTAGTTTTTA
TTGCTTAAATTTTTTCGGCACTTAGGTGGCCGCATCTTTTTTTGATTAGC
TTAGCTATATAAAGCGGTCTCCTTCCTTTTTATTTTGTTGATTCCGCCTC
TTGTATTATTTTCAGATGTGTTAAAAAGGTAAATAAATACTTACTTACTT
ACTTATTTACACAAGGTCGAATCTAAGATGCTGTATGTTTATCACCTAAG
TGCGGGTTAATAAAGGGTTAGGGCATCTATACGGATTTCCTTATATTCTT
TATTTTTCGCTCTCGCTCTACGAATATACCGTGGTTTACATGTGTTGATT
ATTTCGGATATTTTTCGGACATACCAGCAAAATTATTGAATGTCTCATAA
TAAACTCCTCAACACTAACATGAACAAATTACCCTTTAGACAACTAAAAC
AATACAATTTTGTCATTTAGTTTACGCAATTACGAAATACGACATTTTAA
GATTTTTCATCGAGTTAATAAAGTTTCAGATAGGAATCAGTTAGTTGATT
GCAAGCAGCCTAGAGTATACCACCAGCAACAACTTAAGAAATTAGAATAT
AATTCAACAATTTCTCCGCCAGAACTGAAACGTTCAACTTCTTTATTGAG
TATCTCAAAAAAATATTCATAAAACTGCTTCAAGGTGAGATCTGTGCGCG
ATGTTTGAATAATATCATCAACGGTCATACTGGGAATGAATTTCTCATTA
TCAACGCCATAAATTTTAACAGCTTCTTGCGTTTTGAGAGCCTTGAGGGC
TGGGTCCAAGTTACCAGTCGCGTCTGTTATAATAATTTAGACGATGTTAT
TGTATGTTATAGTGATAGTAAAGGCGAGAAAATATAATTTGGCTGCAAAC
TCTTTTCAGTAAAAAAACCCGTTGGTAAATTTCTTTCAGCTTTGGGCTTA
TTTCTTAGATAGAATTATAGATTATAGGTTAGTATATAATAATATTGATC
ATTATATTATGAAAGACGGCGTTTTTTAGTTGATTCAATTTTGAGGCTAT
TTCTCGTTTTTCTCCCCAAAACTCTTCCTCGATAGAGGGATTATACTTTT
GACACAAGCAAGACTGTTATTGCATTGTTTTCGGATGTAGATTGTTGCTC
TTCTGCATGTCTCTTCTTCATCCTAGCCGGCATAATATCATCAAAATCAA
CAGTTCAAATAATCATACCTGACATATCTATACGGACTTAAACTTGAAAA
CCAGTGGTATGAATGATATATTAGCTTTATAAGGATTTTCCACACGAGTC
ACGTGGTGTATCTTGACGTTTAACGAAATACCGGTCAACCGCAAAGTGTC
ATTTAAGCTCACAAAAAATGCACCCTATGAGCAGTGAACTGTTATCAGAT
AGAATAATATCTCACTTTGGCTACTTCATCATCTATTCAGATTCCCTTTG
TTAAAAGTGATTATTGGTCGTAAAAACAGTTTCTCAAAATGCGTGGATGG
AAATCTTTAAAAGGGTATGTTTGCACGGTATTTTTTCTAAGTTACGAAAT
TTTTAGTTTTGGAAAACAATTGATATTTACAAATCTATTTTAGCTTACAA
TCTGGAATTTTAGGAGCAGAAATTTAGTGATTCCATCGATTTTAACTCCT
AAAAATAAAAAATCAATTTTATTCTACATGGAAAGAATAACTAATTTAGG
TGAAAACTTCACACCCAAATTTCTTTTCTTAGAAGTGCCTTTTCAAATAG
TTTTCAACACTGGTGAATCTATGAAAAGAGCTGATTTCAAATATGTAATT
CTTATTTGCATTGAGGGGACCGAAGTGCCCGAAATTTCCAGTTGAAAATA
ATCAAATTATGTGCATAATTTTTTGAGAATTCAAAAGAATCCAATCAAGC
ATGAGAAAATAATTTTTTCATTTTGGTGTTTTTGCGACCCTACCTGGGAC
TTGAGGAGGTTAAAAAAGGTAACCTGACCAGCGGCGCATCCCCGTAACCA
ATTTTGCCCTAGCAGCCTAGTACTGTTACTGATTTTGAAATACAGGGTGT
CTGAAAAAAAGTATGAAGTTCGAACATGAGAAGGTTGTTGCGTGTGTTTA
ACAAAATGTAAGAAAATATATACCATCACAATAACTGTTTTTACAACAGT
CATTATAATTAACTTTCTTTACAATTTTCAATACGTTAAAGTTATTGAGA
ATCATTTTTTGTAAAAATTATTCATAAAAGATGTCTCGTGAAAATTAATA
TGACACAAAGAGAAGCTTTGAGGCCTTTGATAAACATTACAAATTTAGTG
AAGCAAACACAAAAACTTTCTTTCTATAGAAGTTGTACGACTCGATACTT
TCTTTCCGGACACTCTGTATTGCAGATTGCCACTTAAGCTACATTCACGT
CGCTACGTACAAAAGAAGTGTTTTGGCATTGATTCCATGTAATTTTGGTT
AACTTGACATTTAAAAACAATATGCTTACGTCTTTTCATGAAGTGGAACC
TCTCAAAAAACATATTTTGAAAAGATTGTTTATCTTGGCTTGTTCCCTTT
GACAATGTAGTCTCTCTGTTCGAATTGCTCAGTAATTTTCAACCTAAAGG
ATTAAATTTTCTCACTGAATAGTCTAGTTCAAACAAAAAAATCAGCTCGA
GATGAAAGTTTTATTGACAATACTACTAATGCTTTTATTGATCATTAGAA
ATGTCACTTTTTCACTTGCAGAAAACTTTTCGTTTTGTGTAGACAAGACT
CGCATCATTGTTGTATGGCAGCCACTCGTAATGTATAAAGTGTTGGTCCG
CGCTGACAATGTTAATCCTGTCGAAGTTCATCCTAGAAATGAGTGGCTTA
AATTCTTTGACATGTTATTGAGAGAATTCCACACTGATGAATGTTATGAA
ATATGTTTTTATGATCAGCTGGAACATAAAGTAATGAACATCCGAGATTC
TAAAGATTTGGTTCCAAAGGTTCTTGATCAATATTACAATGACCTCATCA
CGATTAATCTAGACGAACCTAACCAATTCATCCAGCAACGTCCTCAGGTG
AAAGATCCTATTAAGGCTCCTGTCTACCCTATTGGCTCTCACAAATTCTT
TGAGGAAGAGCTGAGAAGAAACACTAAGGGAACGCATAATGTCGTTTTGT
ATATCGCTGGTCACTCAATCGACGATAAAACAACAGATGCTTTATCAAAG
CTTCAAAACAAAAAACAATATGCAATCATCCTATTGTCAATGGTTATGTA
TCCTCCAAACTTCACTTGGCTTTCAACCCAGCGTCGAAACTTGTGGTACC
ATCTTGGCAGGCATATGGAACAATTTGATGACGTAAGAAACATATTACGT
AATCCTGACTACAAAGGAACTGAACTAGGGATAACAGAAAATTCAATAAA
TACGACTTGTTTGGAGAAAAATCAACTTGATATCAGTTTTATAATCACCG
AAGGAGCGTCAAGTGATTTCAAAGATGGAATTGACGTTAGGAAAGTGTTT
GATTTTATTGAGAGCTTAAATGACACTTTGCGGTTGACCGGTGTTTCGTT
CAACGTCAAGATACACCACGTGACTCGTGTTGAAAATCCTTATAAAACTA
TGTATCATTCATACCACTGGGTTTTGAAGCAAAAAAAACGACATATTAAT
TACGATATTCAAACTTTCAATTTTGATGATATTAAAAGAAACTGTAGAGT
AAACTATGTTTGTAACACTACAAGAAAAAAAAGGCATACACCACCTTCTC
TTCCTTGTGAAGAAAAGTTAGAATGCTTTGGCAATAATAGAAGGCTCACG
GAGAGAGAATTGAAGATAGTAAAAGAAAAAGGTCTGTACGGCCCATTTAT
CATACCCCTTGTGAAGAAAATACAGTTTGCTTTTCCGATAGTAACGAAAA
GAGAATTGCTGAGAATATATAA

Coding sequence (CDS) from alignment at scaffold_233:502744..517965-

>TCONS_00053663 ID=TCONS_00053663|Name=TCONS_00053663|organism=Clytia hemisphaerica|type=CDS|length=2976bp|location=Sequence derived from alignment at scaffold_233:502744..517965- (Clytia hemisphaerica)
ACTAAGGGAACGCATAATGTCGTTTTGTATATCGCTGGTCACTCAATCGA
CGATAAAACAACAGATGCTTTATCAAAGCTTCAAAACAAAAAACAATATG
CAATCATCCTATTGTCAATGGTTATGTATCCTCCAAACTTCACTTGGCTT
TCAACCCAGCGTCGAAACTTGTGGTACCATCTTGGCAGGCATATGGAACA
ATTTGATGACGTAAGAAACATATTACGTAATCCTGACTACAAAGGAACTG
AACTAGGGATAACAGAAAATTCAATAAATACGACTTGTTTGGAGAAAAAT
CAACTTGATATCAGTTTTATAATCACCGAAGGAGCGTCAAGTGATTTCAA
AGATGGAATTGACGTTAGGAAAGTGTTTGATTTTATTGAGAGCTTAAATG
ACACTTTGCGGTTGACCGGTGTTTCGTTCAACGTCAAGATACACCACGTG
ACTCGTGTTGAAAATCCTTATAAAACTATGTATCATTCATACCACTGGGT
TTTGAAGCAAAAAAAACGACATATTAATTACGATATTCAAACTTTCAATT
TTGATGATATTAAAAGAAACTGTAGAGTAAACTATGTTTGTAACACTACA
AGAAAAAAAAGGCATACACCACCTTCTCTTCCTTGTGAAGAAAAGTTAGA
ATGCTTTGGCAATAATAGAAGGCTCACGGAGAGAGAATTGAAGATAGTAA
AAGAAAAAGGTCTGTACGGCCCATTTATCATACCCCTTGTGAAGAAAATA
CAGTTTGCTTTTCCGATAGTAACGAAAAGAGAATTGCTGAGAATATATAT
GAAAGTTTCATTGGCAATAGTACCAGTGCTTTTATTGATCATTAGAAATG
TCACTTTTTCACTTGCAGAAAACTTTTCATTTTGTGTAGACAAGACTCGC
ATCATTGTTGTTTGGCAGCCACTCGTAATGTATAAAGTGTTGGTCCGTGC
TGACAATGTTAATCCTGTCGAAGTTTATCCTAGAAATGAGTGGCTTAAAT
TCTTTGACATGTTATTGAGAGAATTCCACACTGATGAATGTTATGAAATA
TGTTTTTATGATCAGCTGGAACAGAAAGTAATGAACGTCCGAGATTCTAA
AGATTTGGTTCCAAAGGTTCTTGATCAATATTACAATGACCTCATCACGA
TTAATCTAGACGAACCTAACCAATTCATCCAGCAACGTCCTCAGGTGAAG
GATCCTATTAAGGACCCTGTCTACCCTATTGGCTCTCACAAATTCTTTGA
GGAAGAGCTGAGAAGAAATACTAAGGGAATGCGTAATGTTGTTTTGTATA
TCGCTGGCTACTCAATCGACGATAAAACAACAGATGCTTTATCAAAGCTT
CAAAACAAAAAACAATATGCAATCATCCTATTGTCAATGGTCATGTATGC
TCCAAACTTCACTTGGCTTTCAACCCAGCGCCGAAACTTGTGGTACCATC
TTGGCAGGCATATGGAACAATTCGATGACGTAAGAAACACTAAGGGAACG
CATAATGTCGTTTTGTATATCGCTGGTCACTCAATCGACGATAAAACAAC
AGATGCTTTATCAAAGCTTCAAAACAAAAAACAATATGCAATCATCCTAT
TGTCAATGGTTATGTATCCTCCAAACTTCACTTGGCTTTCAACCCAGCGT
CGAAACTTGTGGTACCATCTTGGCAGGCATATGGAACAATTTGATGACGT
AAGAAACATATTACGTAATCCTGACTACAAAGGAACTGAACTAGGGATAA
CAGAAAATTCAATAAATACGACTTGTTTGGAGAAAAATCAACTTGATATC
AGTTTTATAATCACCGAAGGAGCGTCAAGTGATTTCAAAGATGGAATTGA
CGTTAGGAAAGTGTTTGATTTTATTGAGAGCTTAAATGACACTTTGCGGT
TGACCGGTGTTTCGTTCAACGTCAAGATACACCACGTGACTCGTGTTGAA
AATCCTTATAAAACTATGTATCATTCATACCACTGGGTTTTGAAGCAAAA
AAAACGACATATTAATTACGATATTCAAACTTTCAATTTTGATGATATTA
AAAGAAACTGTAGAGTAAACTATGTTTGTAACACTACAAGAAAAAAAAGG
CATACACCACCTTCTCTTCCTTGTGAAGAAAAGTTAGAATGCTTTGGCAA
TAATAGAAGGCTCACGGAGAGAGAATTGAAGATAGTAAAAGAAAAAGGTC
TGTACGGCCCATTTATCATACCCCTTGTGAAGAAAATACAGTTTGCTTTT
CCGATAGTAACGAAAAGAGAATTGCTGAGAATATATATGAAAGTTTCATT
GGCAATAGTACCAGTGCTTTTATTGATCATTAGAAATGTCACTTTTTCAC
TTGCAGAAAACTTTTCATTTTGTGTAGACAAGACTCGCATCATTGTTGTT
TGGCAGCCACTCGTAATGTATAAAGTGTTGGTCCGTGCTGACAATGTTAA
TCCTGTCGAAGTTTATCCTAGAAATGAGTGGCTTAAATTCTTTGACATGT
TATTGAGAGAATTCCACACTGATGAATGTTATGAAATATGTTTTTATGAT
CAGCTGGAACAGAAAGTAATGAACGTCCGAGATTCTAAAGATTTGGTTCC
AAAGGTTCTTGATCAATATTACAATGACCTCATCACGATTAATCTAGACG
AACCTAACCAATTCATCCAGCAACGTCCTCAGGTGAAGGATCCTATTAAG
GACCCTGTCTACCCTATTGGCTCTCACAAATTCTTTGAGGAAGAGCTGAG
AAGAAATACTAAGGGAATGCGTAATGTTGTTTTGTATATCGCTGGCTACT
CAATCGACGATAAAACAACAGATGCTTTATCAAAGCTTCAAAACAAAAAA
CAATATGCAATCATCCTATTGTCAATGGTCATGTATGCTCCAAACTTCAC
TTGGCTTTCAACCCAGCGCCGAAACTTGTGGTACCATCTTGGCAGGCATA
TGGAACAATTCGATGACGTAAGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033847XLOC_033847Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053663-proteinTCONS_00053663-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053663-exon-scaffold_233-1575043694:517228..517965TCONS_00053663-exon-scaffold_233-1575043694:517228..517965Clytia hemisphaericaexon
TCONS_00053663-exon-scaffold_233-1575043694:502744..503543TCONS_00053663-exon-scaffold_233-1575043694:502744..503543Clytia hemisphaericaexon
TCONS_00053663-exon-scaffold_233-1510915933:517228..517965TCONS_00053663-exon-scaffold_233-1510915933:517228..517965Clytia hemisphaericaexon
TCONS_00053663-exon-scaffold_233-1510915933:502744..503543TCONS_00053663-exon-scaffold_233-1510915933:502744..503543Clytia hemisphaericaexon
TCONS_00053663-exon-scaffold_233-1491911889:517228..517965TCONS_00053663-exon-scaffold_233-1491911889:517228..517965Clytia hemisphaericaexon
TCONS_00053663-exon-scaffold_233-1491911889:502744..503543TCONS_00053663-exon-scaffold_233-1491911889:502744..503543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:502744..517965 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.163468	0.0873888	0.551548	0.0895001	0.744097	0.814533	0	0.142616	0.0543697	0.158846	0	0.0687998	0.82871	0.930723	1.2135	1.58058	0.293773	0.498425	0.893302	1.35382	0	0	0.322368	0.227291	0	0	1.13675	0.553202	0	0.498857
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053663 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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