TCONS_00053605 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053605
Unique NameTCONS_00053605
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1291

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053605 ID=TCONS_00053605|Name=TCONS_00053605|organism=Clytia hemisphaerica|type=transcript|length=1291bp
AAAAgtaatataaaatcaaaatgacaaatgaaaaagtaaCAGCAGTACCA
ATTGAAGACGAGAAAGTCAAAGAATGGGTTGAACACATGTACAGTATAGG
CGAGGACGAGTTGCGAATGATCAAACCTTACAATCAAGTCCTTCGTAAAC
GTTATATGGAGATACACGATGATATACAGAATTTCCAAACAAGAGAGGAT
GACGTATTCATATGCACTGCTCCCAAATCAGGTACGCGTTGGATGCAAGA
AGTCATGTGGTGTTTACGTAATGATTGCGACTTCGAGAAAGCCAACAAGG
TTCCCTTAGATTTCAGGACACCCTACATAGACGCCAAGGCAGTTGCACCG
GATGGGACCTTTACAGAAAATCTCGtcgaaaaaatctcaaagatGGAAGG
ACCAAGATCCATCAAGACACATTTGTCTTATGACATGTTACCAAAATCTC
TCCGCGAAGACCAAATAGGAAAAATCGTTTCAGTCATTCGTAATCCTCGT
GACATTTGTGCTTCATTCTGTCATCACTTCAAACTCACCGACAAATACAC
AGGAGGTGTTGAACTACTGGCTGATGTTTATATGCGTGATGTCGGACCTT
TCTATGGACCTCATTTTACCAACGTGTTAAGCTATTGGAGCCGTCGAGAA
CAGGATAACATTCTGATCGTTTCCTatgaagaaatgaagaaagattTGGC
GTCAGTGATCAGAAAGATTGCCGACTTTCTTGGTAAAGAAATAACAGATG
AGGATGTAGCAAAGATTGTCGATTTCACCAACAttgaaaatatgaagaaa
aatcCCATGAGTAACCTGGAAGAACGAATCAATATGATCAAACGTTCACA
AAACAACACAGAAGAAAAAGGGACATTCATCAACAAAGGCAAAACAGGTG
GTTGGAAGACTGCTTTCACTCAAGAAACTATTCAAAGATTTGAAGAATGG
GAAAAGAAACATTTAGAAGGAACTGGACTAGCCTTCATTTACGAATTATA
AAAAAGTGGGTATAGCAAATGAAGAAGGTAACGCCCTCAAGCATCATCAT
CAATTCTTGTTCGTTTGAACAAACTGTATAatttaatagacgatatcgac
tttccgtgaatttttttgcgcatgcatcatgggtaatcattcggggagaa
ttcggaaagccgatatcgtctattaaatAAGATACTGTTgtgcgcagttt
tgtaatttttgtgcagtttaatattttccgcgcagttttgtattttattg
cgcagttttggaatttttctatgcagttttgtaatttcgaG
Run BLAST on NCBI

transcript from alignment at scaffold_233:1218185..1237483+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053605 ID=TCONS_00053605|Name=TCONS_00053605|organism=Clytia hemisphaerica|type=transcript|length=19299bp|location=Sequence derived from alignment at scaffold_233:1218185..1237483+ (Clytia hemisphaerica)
AAAAgtaatataaaatcaaaatgacaaatgaaaaagtaaCAGCAGTACCA ATTGAAGACGAGAAAGTCAAAGAATGGGTTGAACACATGTACAGTATAGG CGAGGACGAGTTGCGAATGATCAAACCTTACAATCAAGTCCTTCGTAAAC GTTATATGGAGATACACGATGATATACAGAATTTCCAAACAAGAGAGGAT GACGTATTCATATGCACTGCTCCCAAATCAGGTGAATTCTTAATACTACT TCAAAGTAGAAAGGGTTATAATTTCTAACGAAAACGTATACTATATAATA AGGAAAATTGCTCATCTGTTTCATATAATATATGATATGATTACTCATAT CAGATGATGTGCAGATAACCTGCTGAAAGTATCATAAAGATGTATATTAT CATAAAGATGTATACCTTTTCAGGTACGCGTTGGATGCAAGAAGTCATGT GGTGTTTACGTAATGATTGCGACTTCGAGAAAGCCAACAAGGTTCCCTTA GATTTCAGGACACCCTACATAGAGTATGTGAaactaaaatatctttttat ctcCACAGTGAAGTCTCCTTAGATCGAACACGTACAATGGAGTCGCCGAC TTGTTCAAATTATAGAGATTAGAGTTACAGGGACTTCACACTTCACTGTA ATGATACTCAAAAATAGTTACCTTTATAATCTTATAAGCAATTCATAGAC TTTGTTGTTGAGCACAGACCCTTTTTCTCCAGCTCATCATAAGCGAATat atatgtatgtatgtatgtatgtaatagtttatttcaagttgacgcTAGCT CAGCACTCAATGCTTTGAGCACCCTTGATAGTCTAATAAAGAATACCAAG TATGGATTATTGGCaccacaaacaacaaagaataaCTGAAAGACTATCGC CAATGGGAAATAGAATCACTTaattcccgctcaaaaaaaatctgattcaa atattttatactgtctcgcaggcaaaaaaaaatataatgcaGTATGCTTC GGTACCTTGTCTACAAGAATAAAGCTGATATACAGGATAAGGAAAAAGCA ATACAGATCTGTTGATGTAGTCCAAATTCCACTTTTCCTAAAGAAAATGT ATGACAGCTGAACCCAAAATAACTAGCAAAAACAATCcaaggaaaaaaaa taatacGGCAAAACCAAtggtaaaaataaaatgatggtAATAGTTCAAAA CAATACTCGAATTATGCCACTATCCGAGCCTAGTGTAAAAACTGCCACTT AGTACACACCCATCCAGCCAATGCCACAAACCTTAGTAACTATGTCCATC CGACTTACAAAGTATATAAGACGAAtccaataaaatgacaaatctGGTAC CAATATTGTAAAGGTACATAAGTAGCTCAGTTTCGATACATAGGTGAGTC CTCGTGtcttaaaaaatattattttgttacATTCTTGGGCAATAAACAAA ATCACAACCAATCTATTTTATGATTTGTTTTAATTTCAGCGCCAAGGCAG TTGCACCGGATGGGACCTTTACAGAAAATCTCGtcgaaaaaatctcaaag atGGAAGGACCAAGATCCATCAAGACACATTTGTCTTATGACATGTTACC AAAATCTCTCCGCGAAGACCAAATAGGAAAAGTATAACAAAACACACCCT TTTATCATATCTTTTATTTCTAGGTTCTAATGAGACTCAATTTAGAAAGC AAATTGAAACAAATTAATTTGACCTGAAGAAAATGATACTGAAAATCTTC ACTGTTAGGTTATCTTAGTAAGAGAATTGCAGCAATTATAGGGAAAGGAA ACTAATTTAAGAGGTTTAATTCCGGCAAGATCTCCTTTGTTCTTGTCTTT ACTTTGGTTAGTAATGAATGTGTAGGAATCTCTCTCTCATTCTCTCACTT CTCTCTCACACTTGCATCCTCTAACGGATTTGTGCTCCTATATACTTTTG TGGTTTTTTGTAGCGATTCAGACAACATTACTATGATACGTAATTCATGT CATCAACGAGGACTTATCAACAGCGCAATGACCTAAACGTagtaccccct tctcacagtcccactgggacccctactgaaaaaatttaccaaaatgtcGC CCTCAGTGGAAAATTAAGCTCtaatttttgtctccactgaagatgatcag ataagcaaatcctcactgcaaaatattgtccGATATTTccacactgaatt ttctggctcgaaaaaAATGGGATTCAAATTCCCAGCCATAAAAAGCGCGG AAATATCAATCCTGATCGAGTTTTGGTCCTTATTTTTAACCCCTATAGGC CGAAACAATCTTCCCAAGTCTGTGAGAAATGGTGATTCAAACTCATGATT TTTCGTAATCTTAGTAGTCTGCTTTATCGACTAAACCTTTACCGGAAACT CATTCGGGGATTGACAATTTAATGAGCTAataattccactctttttttaG ATCGTTTCAGTCATTCGTAATCCTCGTGACATTTGTGCTTCATTCTGTCA TCACTTCAAACTCACCGACAAATACACAGGAGGTGTTGAACTACTGGCTG ATGTTTATATGCGTGATGTCGGACCTTTCTATGGACCTCATTTTACCAAC GTGTTAAGCTATTGGAGCCGTCGAGAACAGGTATATATTTGAGTCGAACC TGATCAAAAATTAGGTGAACCtagtaaaaatatttaaaaggtTTCTATAC ATCgctggaaagataattttatcagcttttcgAATGAGGGGTAAGTCAAT TTGTAGGTGCTGAAGAAAAAAGTTGTGGtaggtgacgtcatcaaaaagga CAAAATACAAGTTCTCATTTTCGGAGTATTTTTCCATGAATCTCATTTCA CAAACTTTAGTTGATTTATTTGAACCGGAGATAACAGGTAGTGAAAAACC AGTAGGGATCATCACCCAATCCAACTGATGGGAATAGCGCAACAAACTTG ATTATGAATAACTGGAAAAACTACTTGAGTTTGACgtttcaatagacgat atcggatttagataaatgcaatgcattctggtttctagggactctcaaag gaattataatagatcaattataatagNGAATCAATGTAAGAGTgttaata tttctttattataTACTTTTGATCCCGAATTGTCTATGTTTGAAAGGATT ATATAATGATTACTTAAAAAGAGTTTTTCAGATTTATTTGCTTGGatatt tgaaattcttttaGAAGGATTTCTATCGGATAGTACAATCCGTGGGACAA GAAAACAAGATATTTTACTCTTAAaaggaggggccaaagtcagaATTTTT GAGAATTGCATCCGCAGTTTGACACAAATCTGGTCTGCCTACCACGCTAA TGAACCCAATACCCGTGATTGTAGTTTCAATATATGGAGGAAGAAGGCTT AAGAGTTGTTCAAACTGCGTCTTAAAAATAATATGCGCAGTAGAGTCAGG GCGTCAGAGGGGTTAACGAAAAATATAGTGGCAGTAGAGTTTGGAGCATT GTTaacacctccgccactgttTACTCCGCCCCGGGCTAACCActaattcc aaaatttttcccGCCTCCTAAACTATTGCCTTTTTAGTAATCTTGTGTAG ACCATAGGATCGTCTAGGATATGCTCTAATAATATCTACTTCTAAATCTT TCAGATGATTAAACGTTCACAAAACAATACAGAAGAAAAAGGAACATTCA TCAACAAAGGCAAAACAGGTGGTTGGAAGACTGCTTTCACTCAAGAAACT ATTCAAAGATTTGAAGAATGGGAAAAGAAACATTTAGAAGGAACTGGACT AGCCTTCATTTACGAATTATAGAAAAGTGGGTATAGCAAATGAAGAAGGT AACGGCCTTAAGAAAAATCACATTATATAAAGAGAAGAACTCTTGTTCGT TGGAACAAACAGtataatttgaataaataagatacaattcatcaattttg aataataataaaatgaatattgttaaaataatatttgataacacagaata aaataatttttgcaataacAAAATTGAAGTGCACATAGTAAAAAATATGT CCTTCTCCCTTTATACCTAAAGTTTGAAAAGTAAACCCTttcagatatga atgtttggtaattttgaaaagtaaacgACAAAATCTAAGATTTCAACCCT AATAATTGTCCTAAAGTCACCACCAAAagttgaccctgtcagatacacat ctttaCGATTATTAAAGTTGGGACCCTGACAGATATCTTCAGAACCTGAA AaataccctgaccagcggcacgtctacttacccaattttgcctgaaTAAC CCATTCGTGGCTTTCTATAACTTTGGAGCGAGTGATCATTTGGGTACAAA GGTTATTAATTATCACCAGTGACATGCTATCAGAATTAAAGTAGTATaag caaggatttattatacactggatatacaagtaacagatttttgccgattt ctcgtgtactagctatgtccgcagtaatgatattattgttcactctcctt ccctcattaaatgttttttcgaaggatttttattgcatttcttatcgaaa accactcatccaattcccaaaagagacttaaaactttcctgtgagagtca gattcttccacttaattgataattataagtcgttgtgacgtttcaagctg tgagaaagatgcaaaagacgtgttgtgtataagaaattgaatgttaacac cggaaattttcaaacttcaacctcataaaaaccaccttgccaccacgtgc ctccaaaggattttcataccacagtggagccaagacactcaagtcttatg tatgctAATTTCAGCTCTTCTGGGGACAGTCTTGGAAAGATATTTCCAAT agcgcaccgcgctgaatctaaatatagatctcatttttgacataatcatt actctcgatgtgtttgtacgagtttcaatcccatcaacctttgcgttgat ctcttttgcacgttaattgcatcgtttgacaaaagatatataacagcttg cacgtatttttaattgagccgcattgAATTATGGGATTgtaactcgtaca aatgtcaaaaaaagtgaaaagtaataatatgacgtatgcgttgcggagcg ctattgaaaatttcgtgtcactataagcattttgtctgaatttcttgtct aatgatgattttctcacaccagatttcacaaatgtatccagcttggtATG Ttagccttactttcaaactttttttctgtaaatgtacaaaaagaaagagc tagagaacttttttaaaataagactgataaacatttttttaaatcagaca tcttcgagccaccatgacagttgtcctttgcggacaaagcttgaacatca attgttttctgaaacaataaaaatacaatgatcgctctccatcgttttat gagtcgtttatccagtgtataataaatctttggtaTAAGCATCCGCTAAT GTCACAATACAAGTAATCAAGGCTGTTTCCCCATTTGTACTTTCAAGATT TAACCCTACATATACATGTAACACTTGCCTTTCTCAGATAGAAAACCTAT TTTACTGTTGAAGATGTTGAAGAAAGTTCAAGTGTCTGATAGTTTTGGTA AAGACAATATTTTCTGTATTTGAATTCACTAATCAAGATTCTACCAGATA TTTACCCTGACTCTATTAGAAAACATGAAATAGTCACATGAAATTACCAA AACAATTCCAAGAAAGTCCACTTTTTCATTATAATAcattataatattat tttgcTCATGAGAAAACGCCCTTCTGGTAGGGGGTAGTTTTATAACTTCT TCCATTCTTAATTCTAACACTAcattttaattttgtatttgtaCATGATA CGATCAATGTCAAAATCATATGTAATACTTTTGCTGCGAGTTAAGTTTCC AACCTGCCAGATAATGATAATTTGGTTTTTCTTGCGATAAGTGTtctaat tttaccaaaaaatttaatttatttttttcatcgattcaaaaaaaaatgaa tttattattGTTCTTTTGGCGCTTCATAGTCACGTGATGTTAGACTTTAA AAAGGGCGGCTGTCCGAAGCTATTCACAGGTTGTTAGATTGTTACGAAGT GCAAGATGAACAGGAAAGAGCACAAAGAGTACTTTGACGTGAAATTTAGG TCCTTACATAAGGATCTTAAGGTTGGCGAGAACGTGAATCAGAATTCAAA TTCAAGTCGAAGCAAAAACAAGTTGAGTTTAATAACAACATTAAAGAGGA CGTCGAGGGTTTATTGGGGCTGATTGAGGCTGGTTCAAAGAAGAGATCTT CCACTTTGGCCAAGCAGATCATCGAAATTAGCTGATAAAGATTGCTGATA AGTCTCCAGCTGGCTGGGCCACTGTTAGGGAGTACGATTCAGATAGCGTG GCAGACGACAGCTCAGATGACACAAAAGAtaagtgtttttcttttgattt taaactaaagtttttaagaaatgCATTTGATGCATTTGATAGCACTGAAT TAGATTCAGGGGCTGTTAAAGGAAGGCTTAAGAAACAACATTATAGATAG GAGCTAATAAATTTATTCTGAGCGTTATAAAAGAAGGTTACAAAATTGCC TTTTCTATCCTCTCCGACCGAAAGTTTTCGTTCAAATAATCATTCTGCTT TCGACAACACTgcttttgtgacgtcatcaataaaTGAACTTCATCAATTT GGATCAGTTACTGAGATACTCGTCCTTCTGGCAAGCATTATTCTNGTCGA TAAATGAATTTCATCAATCTGGATTAGTTACTGAGATACTCGTCCTTCTG GCAAGCATTATTCTCGACATTCGACATGTCAATAGATTTTTGATCAAGGA GCATATTAAGTTTGACGATTGGCGCGAATTCCAACATTTTGTACGTCCTG ACggttttctttccaaattttcttgGGATTTTCTTGGGAACTGGAAAAGA AGCCAAGATTTTTTGTACTTACAGTGTTACCATTTGGGTTATCTACGGCC CCAGCCTTTTTTACGAAACTTTTAAGACCACTCGTTTCTACATGGCATTC ACAAGGCGTAAAATTATCTGTTTACCTGGATGACGGAGCTTGTATAAACT ACCCGTACGAATCTGCCGTTCAACCTTCGAAGTTAGTGAAAAGCCTCTTA GATAATACTAGTCTACtagtaaatgaagaaaaatcggAATGGGAGCCCAC CCAAAGAATGACCTGGCTAGGAATAGAGctaaatacttttgaaaatacTT ACAAAGTTACAGAGGAGCGTGTCTCCTCTCTCCTCTCTTCGATTGCTAAG TTATTAAATAATCCTCTTAAAACTGCTTGAATTCTTTCTCGTGTTGCTGG AAAAGtagtttcaatgaaatttgttTTGTCAAACCTAATTAGATTGCAAA CTAGAAGCATTTACAGATGTATTGCGGTAACCTCTTGGGATGGTAAACTG AACATTTTGAGATTATATTTTGGAGagataatatgtctatgttaaACAAA AGGAGCACAATTAgcatttgtcaaaacaaaattgttaTAAAGTCTGATGC AAGCGATCATGGTATAGGTGCTATTTTTATTTGAAGCAAGTGGACGAAAA GAATGTTTTCGTATGTTTGACGAAGGAGAAGTATCTAAAAACTCGACTTG GCGCGAACTTGAAGCTATTCGATTTAGTCTTCAATCCTTTGCACCTAAAA TATCAGGAAAGTCTATTTCTTGGCAAACCTAAGATATCAGGGAAGTCTAT TTCTTGGCAAACCGAAAATATGGcagcaaaaaatttatttgctcGAGTGG TAGTAGCAGTCTCTAGCTATAAATATTAACGATCTATCAAGTCTTTTCAA TATAGACTTAGAAGTACGCTGGATATCATCTAGACGTTTCAATGTCTCTG CTGACTACATTTCTAAGTTAGTAGACACCGATGATTGGGAGATCACAGAC GAATTCTTTGAACTTATAGATAGTTTATGGGGTCCCCTGAATATTGATAG ATTTGCTAGTTATAATAACACTAAATGTGAGCGATTCAACTCGAAATTCT ACGTTCCTGGGACGGAAGCGGTGGATACATTTACGCAGGATTGGCGTTTT GAAAACAACCGTTGGGTTCCCCCGGCTAATTTAATCACCCGGGTGCTGAG AACTATCATATCTACGTATGGTATTAGAGTAGTTTTGATAATTCCGTATT TGCGTTCCGCTCCATTTTGGTGACTGCTTCAAAACGGACcgatattttga agttttgtaGTCGATCATATGGTTTTCAAAGCTACTGCTGGTATCCTGAA GTTGGGCAACTACAAGTATTCCCTTCTCGGTTCTCCACATTATCGTGGAG AATTGTGGCATTTTTAATAAAGAGTCGAGTTTTGGGTTCTGGGCCTATTT GATAAGCTGCCCCACCTTCCCAAGTACTTTCGCCCAGTTGGGCAGGGTTA GCCTTAGAGGTAACCCATTATTCCTTAGATTTTAGAAACTAGATGGGGTC CTCCTATGCTCAACCGGGTTGAGAGAAATAAAAAGTGTAACTGGGTTACA CCGTGGCTGGGCCACTTGCTCAGAAGGTTTTGTAAGAAAAATTGGCCTTA TCAGGTTATTTAACCCAAGCTGACTAATTCTGCATTTTTAGGATCCAGCT CGCTTCAAATCGTTAACCAGGTACAGGATGACCACCTGAAGTAACTAGCA CACGGTTTACAAGACGTGCTGTCGAAATCAAGAGCGAATAACACGATTAG AAAATATGCTACCTACTTCAAGTGTTGGTCAAACTGGAGTGCAAAGTTCG ATGAAGTTGTTGAATTCCCTGCCAAAGACACGTACACGTGGTGCTGTTTT TTGTCAGCCTCATACAGTCAGGAATATCATTCTCAGTGTTCGAAAGCTGC TTTTACGCAATCAAACACACTCATAATGTCAATAACCAACCTGACCCAAC TGATTCAGTATTGGCCAGTTATGCCTTAGAGGCAGCAAAACGTACTTGTT CTAAGCCTGAAACGAGTGTACGAATCCATTATTGAGGAGGATCAGCAGTC CCAAGTCTTATGAAACGAATTGAGGTCAATGAAAAGCTATTTGGGACCCA CAGCATTTGTCGTGGAGGAGCCACATGTGCCGCCAACAACGGGGTAAAGG ATCGTCTTTTCCAGAAACACGGTTAGATGGAAATCTGTTAGATGATAATC TGGAACAACTGATGTCTGTTTCTTTGGGGCTAGGCCTCTAAAAGTTTTAC AGTATATAATGATTATTTAGAGCATTTGATGTCTAATTCTGCGAGGCTAG GCCTCTGGTgttatttcttatatttttcaatcgtGTTCTTCTGTTACAAC TATTTACAGGGTTTTCTAGACGACCCACTAACGTGATAAGAAGAGATGAa agtaaaatgataaataaagttattttcgttTTGTGGTCTTAGTGCAACAC ACTTGACAAGGTTTGGAACGAAGAATGAATTCGATTTACGTGAATGTCTT TAGCGTtcaaactgaatgaaaataaattaagaGTAATAAATATTTGATTG ACAAAATTAAAGTAGAAATTAAAATGGATGACAATAAGACTTGAATGAAT TGACCTAACTTAAATTAATCGTATTTTTAGAAGatgaaaatcagaaataa acATAATTTAGATAAAACTAGCCTAAACTATCCTAACCTTAGTGGTCACT GACAAAGAAGTGAGAAGCCTGTGCCAAAAGGGCAGATGTGAAAGTCTAGC AAAGTTGAGCCAACTGAAGTCcacaaaagaaaacagaaaaggaCAAAAGC TTACCGGCTGGCCCAATGTGAATTACTGTGATGAGTGACCAGGTTGTGTA TAACCAACTGGGTTAAACAcatgaaaatgactgaaaagtCTGAGTGAAAT ATCAACACTCAACCAACATGcaaaatagtaaaatttgatatgaaagtTCT CTTCACAACCTTACTGTAAAAGCTCTCaacattgaatgaaaattgaatgc aaTAAATGAGANTTCTGAGTGAAATCTCAACACTCAACCAACATgcaaaa tagtaaaattgaTATGAAAGTTCTCTTCACAACCTTACTGTAAAAGCTCT CaacattgaatgaaaattgaatgcaataaatgagaaaaaactGAGGAGAA AATTGCTCCCTAATTATATAAATTCATTAAAGTGAGAAAAAGTATCTGGA GTaattataaaacaaaagaaaataaatctaaAGTGTGAATGACATATAAA TTAATTGAcagtaaaattaaacaaacaaatgaaatttttaattgattttt aagtttttacattttttttgtagGAACACTTTCTGTATTCAAGTGTTCAC ATGACACGTTTGAGTTtacgaattagaaaataaatgaatttattattgTT CTTTTGGCGCTTCATAGTCACGTGATGTTAGACTTTAAAAAGGGCGGCTG TCCGAAGCTATTCACAGGTTGTTAGATTGTTACGAAACCGCCCGCCCGCC CACTTGTTAAGCTATTACGTCGTTACAGTCTCTCTGATTTCAAAGAGTCT AGTCTTTGACCGCTTTAGTGCCATAGTATTAATATATTACTACATATATT GGATTATATGATATTGATCTATAAAGAAGTGTTATTGTCAATAGTATTTA TAAATATACATTTATATTTACTTTATTATCTTGCACATTTCGGGCTTTCT AGACGACCCACTAACGTGATAAGAAGAGATGAaagtaaaatgataaataa agttattttcgtttgagtttacgaattagaaaataaactAGCTTTAAAAA TATGTCAAAGCTTGGAAAACTTGAACTAAAGTGTatagatataattggca gtggaaacaagaatgcctgtaacttttgatagtccgaTATAATTGCGAAA AATTCTTTTGCTTGGTTTAGAgaataaaaagctctatatttgaatgtatt tttggttggaaaattcacgatttttagcggttaaatttgcgattgcaaaa attgagcttttgtTTTTACTTATGCTAccacgttcatttttacaccagtg gtagttcaaccttaggttaagaaggttgtcaaattggaaggcaaacggaa aagtccttcggaagatatgggacccaaaATACCCCTTGTTAGCGCTTTCG TGTGAAACATCAAATCTccatctttttaataaaaacgggggtagtgatga tAAAACCGTTTTTcaatcataacacattttacgatctttttacgataatg acctcatagccaaaacTGTGCTTAGTGTTTTGGGAAGTTTCAGAGTTCTT TAattacttaaaaataacaaaggcaatacaAGTTCAATATGcttaaaatt tcaataaaaacaatcaaattgtgatttcaattcgtttcgaaataatcaat gataccaatgcatcaacacttaacactttccaatttttaattgcactgtt caaaaaaagataacataacccccggtttcagtaaaaatttagattttcaa tatttcacagaaaagtgctagcagggggtatttcgggtcccatatcttcc caAGTTTCATGACAGTTCTCTGGTATATAAAGATAATTTGCATGTTTTGC ATTCATAGATCGTTTCATGGCCATTCCGTTTACGTTTAGGTTCATCATTA CACCTTCGAAACTCCAGCTCTGTGGTTGAACAAACTTTACAAACGCGttg taaaaactttttcttgtgCTTATTTCAGGAACATAGGTATTTTGGTTAAA AAGTGTCTGCATGTCAGTCTCTCATAATCCTCTGCTGTTGTATTGTTCAA GTTATTTCTGACTTTATGCAAAACTGATTGATTTACAAGCTGACGAATTA CTGACAATCGAAAATCAGTATGAGATAGCAGACTGTATAATTTTGATCGG TACACCATGTCTGATTTTATGTTCTTTATATAATATGTACGAGTTTACCA TACATACATTTAGAAGTCTGAAAACAACCTTTTTCCACCATTTCATTGTT CTCTTTGATAAATGAGAATATTTCAATAACTGATCGTTAGCGTCTACACC ACTCATGTATTTATTGTACTTGCTCATGACAAGCGGTTTCTGGATTGGTT CACCTGTTCCGACCTCAAAAATCCATAGTGGCTCCTCCACGGCTCACTCA CATTAGACTTTTAGCAtatactagccgtcacccggcgtcgcacccgccga gtagagtgttgttgaacacatcaaaagccctttggatggtggaggagggt aaaaattttttattgtaagCCCAAAGAACAAAATATTACCACTTTTCACT GATCAAAACCCGGAAAACCGCATATTtcatgtttggtgacgtcattttgg ccctaagtgacgtcatcgaaagggtaataaacttttcacttcactgaaat caatttgtcatttatcaaaaagattctcttgatgatttccgatccaatga ggggtcaaccattgcttaaatcctactcaaactcaagatattgtattttt ccgtttttgatgacgtcatcggacccataAAGCCAGAGACGTTTATACCC ACTCTTACCTTTCCTAACTTATTCTCTATTAAattcccgatccaatgagg ggtcaaccatctcttaactcctttccaatctcgNAATAACCTTTTCCTAT TTAcaacataataaaaattatggaacataaagtgttcttataaaataaag agtCGGTttgtctaaaaagtgagtcggtctaaaaaagtgagtcggttggt cggtctaaaagtgagtcggtcggtcggtctaaaaagtgagttggtcggtc ggtctaaaaagtgagtgggtcggtcggtctaaaaaagtgagtcggtcggt ctaaaaattgagtcggtcagtcggtctaaaaagtaAGTCGGTCcatcggt ctaaaaagtgagtcggtccatcggtctaaaaagtgagtcggtcgatcagt ctaaaaagtgagtcggtcgctCGGTCTAAAataaaagtgagtcggtcgct CGGTCTTagaagtgaggcggtcggtcggtctacaaaagtgagtcggtcgg tcggtctaaaaagtgagtcggtcggtcggtctaaaaaagtgagtcggttg gtcggtctaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg tcggtctaaaaagtgagtcggtccgtcggtctaaaacgtgagtcggtcgg tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg tcggtctaaaaagtgagtcggtcggtcggtctaaaacgtgagtcggtcgg tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg tcggtctaaaaagtgagtcggtcggtcggtctaaaacgtgagtcggtcgg tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc tccgtctaaaaagtgaggcgggcggtcggtctacaaagtgaggcggtcgg tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgc tcggtctaaaaagtgagtcggtcggtcggtccacaaagtgaggcggtcgg ttggtctacaaagtgaggcggtcggtcggtatacaaagtgaggcggtccg TTGGTCTACAAAGTGAGTCGGCCGGTCGGTCGTGGATACGaacatatttg tgattgccgcctacaAAGAAAAGACTACCAAATTACTTGGATGTATTACC ATGCAGCAAAAATATGCCACTCTCAATTTTCAAGAGGGCTAAAGTAAATG TTTTCATTGGTCGGTCTttggtctttgtttattttgttaagaTTGTTGGT TGCGATAAGCCCCATAATAATTTCTGAAGAACAACTGTACAAATCCATAA CAAAATGTTCTCTATTTAAGAAACGGGATACCATGACCATTAGACCATTC CCTATCCATGTACAAACGATGGCACCAGTGACCAGAGCAGAGAGACcaga tcaatcaatcaatattaagaaaccaaagaaagaaaaagcaaaatagcTGT CGAACTTCTTGCTATTCaatgttttatttacttttacgaaaattaccagt aaagtagaatttcgaaaacggagatacgcttccgaaccgggcgacgtttc ccgatcggcaaggaaccgTAGGGTTGTTTTCCGGTGACGTGTCTCAAAAG AAATGtactccgcctcgaaaaaagaacactctactgttttcccgctcgga gctcgatttaaaaagagacttggaaaataaatccataatggctcccccac ggctcatagagaattagacttttagtatatagactagccgtcacccggcg tcgcacccgccgagtagagtgttgttgaacacatcaaaagccctttggat ggtgagGGAGGGTAATAGGCTTGAATTCTAAGtccaaagaacgaaatatt accacCTATGACTGATTGAAGCTCGAGAAATCGCATATTTaatgtttggt gacgtcatttgggccgtaaatgacgtcatcgaaaactGATGAATTGTTCA CTTCTTTGAATGAAATGAATTAATTATTTACCCAAAAGATTATCtagatg atttccgatccaatgggGGGTCNGATTATTTACCCAAAAGATTATCtaga tgatttccgatccagtGAGGGGTCGatcattgcttaaatccttctcaaac tcaaGATATCAGAttttcaggttttgatgacgtcatcggacccaaaatgc ctcagtttgaatatatttattttcgaaaNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNATCCAAACagtcggtcacgtaactctcgaacc cccatctcaaaaatccataatggctcccccacggctcatagaaaattaga cttttagtatatagatagatagaagaTTCACGTGTAAAAgtaatataaaa tcaaaatgacaaatgaaaaagtaaCAGCAGTACCAATTGAAGACGAGAAA GTCAAAGCATGGGTTGAACACATGTACAGTATAGGCGAGGACGAGTTGCG AATGATCAAACCTTACAATCAAGTCCTTCGTAAAGGTTATATGGAGATAC ACGATGATATACAGAATTTCGAAACAAGAGAGGATGACGTATTCATATGC ACTGCTCCCAAATCAGGTGAATTCTTAATACTACTTCAAAGTGGAAAGGG TTATAATTTCTAACGAAGACGTATACTGTATTATaaggaaaaattttcat ttgcttcctATAATAAATGATATGATTACTCATATCAGATAGTTTTCAAA TATCATGCTGACAGTATCATAAAGATGTATATATAAGTTTGTGTTATAAT TTCAGGTACGCGTTGGATGCAAGAAGTCTTGTGGTGTTTACGGAATGATT GTGACTTCGAGAAAGCCAACAAGGTTTCCTTACAAGTTAGGACACCCTTT TTAGAGTACGTGAAACTAAAATACCTCGTTGGGGCTTCGTTACCTTGCCT ATAAAAATATACCGGCTTACATATGAGTCCTCGTGTCTTTCCAAAACTAT TTTGTTAAATTATTGGGCCAATAAACAAAATCACAGCCAATCCATTTTAC GGTTGTTTTAATTTCAGCGCGAAAGCAGTTTTACCGGTTGGAGCCtttac agaaaatttttttgaaagaatctCAAAGATGGAAGGACCAAGAACTATCA ATACACATTTTTGTTATGATATGTTACCCAAATCTCTTCACGAAGACCAA AAAGGAAAAGTAAGACAAAATAACCCTTTTATCATATCTTTGATTTCTAG GCTTTTCTTAGACTGAAGATGAAAATTACAAGGACATATCAACATCATAT GAGGATTGGAATTAGATTTAAACTCATGATTTTTCGCAATTTTAGTACCC TGGTCTATCGAATAGACCTTTCCCGGAGACTCATTCGGGAATTTACAATT TAACGAGTCCATAATTCCACTTTTTTTTCCTCAGATCGTTTCAGTTATTC GGAATCCTCGTGACATTTGTGCTTCATTCTGTCATCACTTCAAACTGACC GACAAATACACAGGAGGTGTTGAACTTCTGGCTGATGTTTATATGCGTGA TGTTGGACTTTTCTATGGACCTCATTTCACCAACGTCTTAAGCTATTGGA GCCGTCGAGAACAGGTATATATTTGAGTCGAACCTCATCAAAAATTAGGT GAACCTAATAGGAATATTCAAAAGGTTTCtatacatcgttggaaagataa ttttatcagcttttcgAATGAAGGTTAAAGTCAGTTTGTAGGTGCTagag aaaatcaaaaaggaaaaaatacaaGTTCTCATTTTCGGAGTATTTTTTCC AAGGATCTCATTTCACGAACtttatttgatttatttgaACCGGAGATAAC AGGTAGTGAATAACCAGTAGGGATCATCACCCAATCCAACTGGATGTGAA TAGTGCAACAAACTTGATTATGAATAACTGGAAAAACTACTAGAGTTTGA CGTTTCAATCAGAATTTAACCAAATTAGTCCCTTCATTCTTTTCTTTAGG ATAACATTCTGATCGTTTCCTatgaagaaatgaagaaagattTGGCGTCA GTGATCAGAAAGATTGCCGACTTTCTTGGTAAAGAAATAACAGATGAGGA TGTAGCAAAGATTGTCGATTTCACCAACAttgaaaatatgaagaaaaatc CCATGAGTAACCTGGAAGAACGAATCAATGTAAGAGTgttaatatttctt tattataTACTTTTGATTCCGAACTGTCCATGTTGGAAAGGATTATATAA TGATTACTTTAAAAGAGTGATTCAGATTTATTTGCTTGGATCTTTGAAAT tctgtttttcatttaaaagGATTTTTATCTGATATTACAATCCGTGAGAC AAAAAAACAAGATAATTTACTCTTAGAAGGAGGCGCCAAAGTCAGAATTT TCGCATATTGCCTCCGCAGTGTGACACATATCTGGTCTGCCTACCACGCT AATGAACCCAATATACCGTGCAGTTTCAATATATGGAGGAAGAAAGCTCA AGAGCTTTTCAAACTGTGTCTTGTCTTCAACCAGATCTATTTAATTGATT CAGGGATCTGCTTATACGATAGAGGGATAGTAATcgcaggaagaaaaaaa atatatagtttatagaagtataaaaccttcaactactcaaagtGGAAACA CTAAAGACAAAACCCACAAAAAAAAGACAATACGAATtgcaacaaaaatc tagaatgaacattcacagaaaatcgaTCAGGTTGGAGTTGAAAAGAAACA TGTAatgacatagaaatccgtcaatgtaaaactagtgatctaaaatgact ATAAGGAAGAAAGCagctcaatatgagttaagatggaaagaagtaactca atatgagtcaaaaaatatttcaagaaaccTAATAAtatgttcctcagttt tcgacctacacaggatttcggcctttaacgaaaatatcctcctatatgat ggaaatagggttgtgtaggtaggccaagcagtgttaattagacatcacca cagataaaagatagtaaaaagatgtgtttagtgaAAGTATAAAACGCGCG CAACAATATAGAATAaactaaaacgtaaaaaccacggaaccagccgaaga aactaaaataacattGAGAAAAGAAGTACTACTAGACAAAGCtgccacac ctttgacacgtttctgccacaGCGTTGAAGAAAGCATACTAGAAGAGAAA GAACTGGGATTGGATTGCCACTTtccaaccctgtggctctcacacacatt ttacagttcaaagaataagatggaaagagtggtgaaagaatgagaattta aaaatatatatatatgcGCAGTAGAGTCAGGGCATCAGGGCGTCAGAGGG GTTAACAGAAAATATAGTGGCAGTAGAGTTTGGAGCACTGTTaacacctc cgccactgttTACTCCGCCCCGGGCTAACAACTCATTCGTAAATTTTCCC GCCtactaaactattccctttttagtgatcttgtgtaaaTGATAGGATTG TCTAGAATCTGCCCTAATAATATCTACTTTTGAATCTTTCAGATGATCAA ACGTTCACAAAACAACACAGAAGAAAAAGGGACATTCATCAACAAAGGCA AAACAGGTGGTTGGAAGACTGCTTTCACTCAAGAAACTATTCAAAGATTT GAAGAATGGGAAAAGAAACATTTAGAAGGAACTGGACTAGCCTTCATTTA CGAATTATAAAAAAGTGGGTATAGCAAATGAAGAAGGTAACGGNCTCCTT CATTTACGAATTATAAAAAATGGGTATGAAAGAAGGTAACGCCCTCAAGC ATCATCATCAATTCTTGTTCGTTTGAACAAACTGTATAatttaatagacg atatcgactttccgtgaatttttttgcgcatgcatcatgggtaatcattc ggggagaattcggaaagccgatatcgtctattaaatAAGATACTGTTgtg cgcagttttgtaatttttgtgcagtttaatattttccgcgcagttttgta ttttattgcgcagttttggaatttttctatgcagttttgtaatttcgaG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033823XLOC_033823Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053605-exon-scaffold_233-1491911889:1218185..1218415TCONS_00053605-exon-scaffold_233-1491911889:1218185..1218415Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1510915933:1218185..1218415TCONS_00053605-exon-scaffold_233-1510915933:1218185..1218415Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1575043694:1218185..1218415TCONS_00053605-exon-scaffold_233-1575043694:1218185..1218415Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1491911889:1218608..1218707TCONS_00053605-exon-scaffold_233-1491911889:1218608..1218707Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1510915933:1218608..1218707TCONS_00053605-exon-scaffold_233-1510915933:1218608..1218707Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1575043694:1218608..1218707TCONS_00053605-exon-scaffold_233-1575043694:1218608..1218707Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1491911889:1219674..1219815TCONS_00053605-exon-scaffold_233-1491911889:1219674..1219815Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1510915933:1219674..1219815TCONS_00053605-exon-scaffold_233-1510915933:1219674..1219815Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1575043694:1219674..1219815TCONS_00053605-exon-scaffold_233-1575043694:1219674..1219815Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1491911889:1220635..1220814TCONS_00053605-exon-scaffold_233-1491911889:1220635..1220814Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1510915933:1220635..1220814TCONS_00053605-exon-scaffold_233-1510915933:1220635..1220814Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1575043694:1220635..1220814TCONS_00053605-exon-scaffold_233-1575043694:1220635..1220814Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1491911889:1235434..1235613TCONS_00053605-exon-scaffold_233-1491911889:1235434..1235613Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1510915933:1235434..1235613TCONS_00053605-exon-scaffold_233-1510915933:1235434..1235613Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1575043694:1235434..1235613TCONS_00053605-exon-scaffold_233-1575043694:1235434..1235613Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1491911889:1236977..1237170TCONS_00053605-exon-scaffold_233-1491911889:1236977..1237170Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1510915933:1236977..1237170TCONS_00053605-exon-scaffold_233-1510915933:1236977..1237170Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1575043694:1236977..1237170TCONS_00053605-exon-scaffold_233-1575043694:1236977..1237170Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1491911889:1237220..1237483TCONS_00053605-exon-scaffold_233-1491911889:1237220..1237483Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1510915933:1237220..1237483TCONS_00053605-exon-scaffold_233-1510915933:1237220..1237483Clytia hemisphaericaexon
TCONS_00053605-exon-scaffold_233-1575043694:1237220..1237483TCONS_00053605-exon-scaffold_233-1575043694:1237220..1237483Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1218185..1237483 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.203682 0.155712 0.522712 0.421692 0.143876 0 0 0 0.246276 0.0561171 0.0332617 0.071385 9.30384 7.96238 8.35467 9.96725 11.9131 15.264 16.1756 12.7299 9.69752 10.4838 18.3559 22.692 24.1454 24.2422 191.191 238.962 32.4869 22.3303
Blast
BLAST of TCONS_00053605 vs. Swiss-Prot (Human)
Match: ST1C2 (Sulfotransferase 1C2 OS=Homo sapiens GN=SULT1C2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.814e-42
Identity = 94/278 (33.81%), Postives = 151/278 (54.32%), Query Frame = 3
Query:  174 IQNFQTREDDVFICTAPKSGTRWMQEVMWCLRNDCDFEKANKVPLDFRTPYID-AKAVAPDGTFTENLVEKISKMEGPRSIKTHLSYDMLPKSLREDQIGKIVSVIRNPRDICASFCHHFKLTDKYT--GGVELLADVYMRDVGPFYGPHFTNVLSYWSRREQDNILIVSYEEMKKDLASVIRKIADFLGKEITDEDVAKIVDFTNIENMKKNPMSNLEERINMIKRSQNNTEEKGTFINKGKTGGWKTAFTQETIQRFEEWEKKHLEGTGLAFIYEL 998
            IQ+F+ + DD+ ICT PK+GT W+QE++  +  + D EK  +  +  R P+I+ A+   P G      VEK   M  PR +KTHLS  +LP S  E+   K + V RN +D   S+ H  ++       G  E   + ++ +    +G  F +V  +W  +++  IL + YE++K+D    IRK+  F+GK++ +  + KIV  T+ E MK+NPM+N   R  + K   + +    +F+ KG  G WK  FT    +RF+E  ++ +EGT + F  EL
Sbjct:   32 IQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQHRHPFIEWARPPQPSG------VEKAKAMPSPRILKTHLSTQLLPPSFWENNC-KFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFI-NGKVVWGSWFDHVKGWWEMKDRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTN---RSTVSKSILDQS--ISSFMRKGTVGDWKNHFTVAQNERFDEIYRRKMEGTSINFCMEL 296          
The following BLAST results are available for this feature:
BLAST of TCONS_00053605 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ST1C22.814e-4233.81Sulfotransferase 1C2 OS=Homo sapiens GN=SULT1C2 PE... [more]
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