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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053605 ID=TCONS_00053605|Name=TCONS_00053605|organism=Clytia hemisphaerica|type=transcript|length=1291bp AAAAgtaatataaaatcaaaatgacaaatgaaaaagtaaCAGCAGTACCA ATTGAAGACGAGAAAGTCAAAGAATGGGTTGAACACATGTACAGTATAGG CGAGGACGAGTTGCGAATGATCAAACCTTACAATCAAGTCCTTCGTAAAC GTTATATGGAGATACACGATGATATACAGAATTTCCAAACAAGAGAGGAT GACGTATTCATATGCACTGCTCCCAAATCAGGTACGCGTTGGATGCAAGA AGTCATGTGGTGTTTACGTAATGATTGCGACTTCGAGAAAGCCAACAAGG TTCCCTTAGATTTCAGGACACCCTACATAGACGCCAAGGCAGTTGCACCG GATGGGACCTTTACAGAAAATCTCGtcgaaaaaatctcaaagatGGAAGG ACCAAGATCCATCAAGACACATTTGTCTTATGACATGTTACCAAAATCTC TCCGCGAAGACCAAATAGGAAAAATCGTTTCAGTCATTCGTAATCCTCGT GACATTTGTGCTTCATTCTGTCATCACTTCAAACTCACCGACAAATACAC AGGAGGTGTTGAACTACTGGCTGATGTTTATATGCGTGATGTCGGACCTT TCTATGGACCTCATTTTACCAACGTGTTAAGCTATTGGAGCCGTCGAGAA CAGGATAACATTCTGATCGTTTCCTatgaagaaatgaagaaagattTGGC GTCAGTGATCAGAAAGATTGCCGACTTTCTTGGTAAAGAAATAACAGATG AGGATGTAGCAAAGATTGTCGATTTCACCAACAttgaaaatatgaagaaa aatcCCATGAGTAACCTGGAAGAACGAATCAATATGATCAAACGTTCACA AAACAACACAGAAGAAAAAGGGACATTCATCAACAAAGGCAAAACAGGTG GTTGGAAGACTGCTTTCACTCAAGAAACTATTCAAAGATTTGAAGAATGG GAAAAGAAACATTTAGAAGGAACTGGACTAGCCTTCATTTACGAATTATA AAAAAGTGGGTATAGCAAATGAAGAAGGTAACGCCCTCAAGCATCATCAT CAATTCTTGTTCGTTTGAACAAACTGTATAatttaatagacgatatcgac tttccgtgaatttttttgcgcatgcatcatgggtaatcattcggggagaa ttcggaaagccgatatcgtctattaaatAAGATACTGTTgtgcgcagttt tgtaatttttgtgcagtttaatattttccgcgcagttttgtattttattg cgcagttttggaatttttctatgcagttttgtaatttcgaG Run BLAST on NCBI transcript from alignment at scaffold_233:1218185..1237483+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053605 ID=TCONS_00053605|Name=TCONS_00053605|organism=Clytia hemisphaerica|type=transcript|length=19299bp|location=Sequence derived from alignment at scaffold_233:1218185..1237483+ (Clytia hemisphaerica) AAAAgtaatataaaatcaaaatgacaaatgaaaaagtaaCAGCAGTACCA
ATTGAAGACGAGAAAGTCAAAGAATGGGTTGAACACATGTACAGTATAGG
CGAGGACGAGTTGCGAATGATCAAACCTTACAATCAAGTCCTTCGTAAAC
GTTATATGGAGATACACGATGATATACAGAATTTCCAAACAAGAGAGGAT
GACGTATTCATATGCACTGCTCCCAAATCAGGTGAATTCTTAATACTACT
TCAAAGTAGAAAGGGTTATAATTTCTAACGAAAACGTATACTATATAATA
AGGAAAATTGCTCATCTGTTTCATATAATATATGATATGATTACTCATAT
CAGATGATGTGCAGATAACCTGCTGAAAGTATCATAAAGATGTATATTAT
CATAAAGATGTATACCTTTTCAGGTACGCGTTGGATGCAAGAAGTCATGT
GGTGTTTACGTAATGATTGCGACTTCGAGAAAGCCAACAAGGTTCCCTTA
GATTTCAGGACACCCTACATAGAGTATGTGAaactaaaatatctttttat
ctcCACAGTGAAGTCTCCTTAGATCGAACACGTACAATGGAGTCGCCGAC
TTGTTCAAATTATAGAGATTAGAGTTACAGGGACTTCACACTTCACTGTA
ATGATACTCAAAAATAGTTACCTTTATAATCTTATAAGCAATTCATAGAC
TTTGTTGTTGAGCACAGACCCTTTTTCTCCAGCTCATCATAAGCGAATat
atatgtatgtatgtatgtatgtaatagtttatttcaagttgacgcTAGCT
CAGCACTCAATGCTTTGAGCACCCTTGATAGTCTAATAAAGAATACCAAG
TATGGATTATTGGCaccacaaacaacaaagaataaCTGAAAGACTATCGC
CAATGGGAAATAGAATCACTTaattcccgctcaaaaaaaatctgattcaa
atattttatactgtctcgcaggcaaaaaaaaatataatgcaGTATGCTTC
GGTACCTTGTCTACAAGAATAAAGCTGATATACAGGATAAGGAAAAAGCA
ATACAGATCTGTTGATGTAGTCCAAATTCCACTTTTCCTAAAGAAAATGT
ATGACAGCTGAACCCAAAATAACTAGCAAAAACAATCcaaggaaaaaaaa
taatacGGCAAAACCAAtggtaaaaataaaatgatggtAATAGTTCAAAA
CAATACTCGAATTATGCCACTATCCGAGCCTAGTGTAAAAACTGCCACTT
AGTACACACCCATCCAGCCAATGCCACAAACCTTAGTAACTATGTCCATC
CGACTTACAAAGTATATAAGACGAAtccaataaaatgacaaatctGGTAC
CAATATTGTAAAGGTACATAAGTAGCTCAGTTTCGATACATAGGTGAGTC
CTCGTGtcttaaaaaatattattttgttacATTCTTGGGCAATAAACAAA
ATCACAACCAATCTATTTTATGATTTGTTTTAATTTCAGCGCCAAGGCAG
TTGCACCGGATGGGACCTTTACAGAAAATCTCGtcgaaaaaatctcaaag
atGGAAGGACCAAGATCCATCAAGACACATTTGTCTTATGACATGTTACC
AAAATCTCTCCGCGAAGACCAAATAGGAAAAGTATAACAAAACACACCCT
TTTATCATATCTTTTATTTCTAGGTTCTAATGAGACTCAATTTAGAAAGC
AAATTGAAACAAATTAATTTGACCTGAAGAAAATGATACTGAAAATCTTC
ACTGTTAGGTTATCTTAGTAAGAGAATTGCAGCAATTATAGGGAAAGGAA
ACTAATTTAAGAGGTTTAATTCCGGCAAGATCTCCTTTGTTCTTGTCTTT
ACTTTGGTTAGTAATGAATGTGTAGGAATCTCTCTCTCATTCTCTCACTT
CTCTCTCACACTTGCATCCTCTAACGGATTTGTGCTCCTATATACTTTTG
TGGTTTTTTGTAGCGATTCAGACAACATTACTATGATACGTAATTCATGT
CATCAACGAGGACTTATCAACAGCGCAATGACCTAAACGTagtaccccct
tctcacagtcccactgggacccctactgaaaaaatttaccaaaatgtcGC
CCTCAGTGGAAAATTAAGCTCtaatttttgtctccactgaagatgatcag
ataagcaaatcctcactgcaaaatattgtccGATATTTccacactgaatt
ttctggctcgaaaaaAATGGGATTCAAATTCCCAGCCATAAAAAGCGCGG
AAATATCAATCCTGATCGAGTTTTGGTCCTTATTTTTAACCCCTATAGGC
CGAAACAATCTTCCCAAGTCTGTGAGAAATGGTGATTCAAACTCATGATT
TTTCGTAATCTTAGTAGTCTGCTTTATCGACTAAACCTTTACCGGAAACT
CATTCGGGGATTGACAATTTAATGAGCTAataattccactctttttttaG
ATCGTTTCAGTCATTCGTAATCCTCGTGACATTTGTGCTTCATTCTGTCA
TCACTTCAAACTCACCGACAAATACACAGGAGGTGTTGAACTACTGGCTG
ATGTTTATATGCGTGATGTCGGACCTTTCTATGGACCTCATTTTACCAAC
GTGTTAAGCTATTGGAGCCGTCGAGAACAGGTATATATTTGAGTCGAACC
TGATCAAAAATTAGGTGAACCtagtaaaaatatttaaaaggtTTCTATAC
ATCgctggaaagataattttatcagcttttcgAATGAGGGGTAAGTCAAT
TTGTAGGTGCTGAAGAAAAAAGTTGTGGtaggtgacgtcatcaaaaagga
CAAAATACAAGTTCTCATTTTCGGAGTATTTTTCCATGAATCTCATTTCA
CAAACTTTAGTTGATTTATTTGAACCGGAGATAACAGGTAGTGAAAAACC
AGTAGGGATCATCACCCAATCCAACTGATGGGAATAGCGCAACAAACTTG
ATTATGAATAACTGGAAAAACTACTTGAGTTTGACgtttcaatagacgat
atcggatttagataaatgcaatgcattctggtttctagggactctcaaag
gaattataatagatcaattataatagNGAATCAATGTAAGAGTgttaata
tttctttattataTACTTTTGATCCCGAATTGTCTATGTTTGAAAGGATT
ATATAATGATTACTTAAAAAGAGTTTTTCAGATTTATTTGCTTGGatatt
tgaaattcttttaGAAGGATTTCTATCGGATAGTACAATCCGTGGGACAA
GAAAACAAGATATTTTACTCTTAAaaggaggggccaaagtcagaATTTTT
GAGAATTGCATCCGCAGTTTGACACAAATCTGGTCTGCCTACCACGCTAA
TGAACCCAATACCCGTGATTGTAGTTTCAATATATGGAGGAAGAAGGCTT
AAGAGTTGTTCAAACTGCGTCTTAAAAATAATATGCGCAGTAGAGTCAGG
GCGTCAGAGGGGTTAACGAAAAATATAGTGGCAGTAGAGTTTGGAGCATT
GTTaacacctccgccactgttTACTCCGCCCCGGGCTAACCActaattcc
aaaatttttcccGCCTCCTAAACTATTGCCTTTTTAGTAATCTTGTGTAG
ACCATAGGATCGTCTAGGATATGCTCTAATAATATCTACTTCTAAATCTT
TCAGATGATTAAACGTTCACAAAACAATACAGAAGAAAAAGGAACATTCA
TCAACAAAGGCAAAACAGGTGGTTGGAAGACTGCTTTCACTCAAGAAACT
ATTCAAAGATTTGAAGAATGGGAAAAGAAACATTTAGAAGGAACTGGACT
AGCCTTCATTTACGAATTATAGAAAAGTGGGTATAGCAAATGAAGAAGGT
AACGGCCTTAAGAAAAATCACATTATATAAAGAGAAGAACTCTTGTTCGT
TGGAACAAACAGtataatttgaataaataagatacaattcatcaattttg
aataataataaaatgaatattgttaaaataatatttgataacacagaata
aaataatttttgcaataacAAAATTGAAGTGCACATAGTAAAAAATATGT
CCTTCTCCCTTTATACCTAAAGTTTGAAAAGTAAACCCTttcagatatga
atgtttggtaattttgaaaagtaaacgACAAAATCTAAGATTTCAACCCT
AATAATTGTCCTAAAGTCACCACCAAAagttgaccctgtcagatacacat
ctttaCGATTATTAAAGTTGGGACCCTGACAGATATCTTCAGAACCTGAA
AaataccctgaccagcggcacgtctacttacccaattttgcctgaaTAAC
CCATTCGTGGCTTTCTATAACTTTGGAGCGAGTGATCATTTGGGTACAAA
GGTTATTAATTATCACCAGTGACATGCTATCAGAATTAAAGTAGTATaag
caaggatttattatacactggatatacaagtaacagatttttgccgattt
ctcgtgtactagctatgtccgcagtaatgatattattgttcactctcctt
ccctcattaaatgttttttcgaaggatttttattgcatttcttatcgaaa
accactcatccaattcccaaaagagacttaaaactttcctgtgagagtca
gattcttccacttaattgataattataagtcgttgtgacgtttcaagctg
tgagaaagatgcaaaagacgtgttgtgtataagaaattgaatgttaacac
cggaaattttcaaacttcaacctcataaaaaccaccttgccaccacgtgc
ctccaaaggattttcataccacagtggagccaagacactcaagtcttatg
tatgctAATTTCAGCTCTTCTGGGGACAGTCTTGGAAAGATATTTCCAAT
agcgcaccgcgctgaatctaaatatagatctcatttttgacataatcatt
actctcgatgtgtttgtacgagtttcaatcccatcaacctttgcgttgat
ctcttttgcacgttaattgcatcgtttgacaaaagatatataacagcttg
cacgtatttttaattgagccgcattgAATTATGGGATTgtaactcgtaca
aatgtcaaaaaaagtgaaaagtaataatatgacgtatgcgttgcggagcg
ctattgaaaatttcgtgtcactataagcattttgtctgaatttcttgtct
aatgatgattttctcacaccagatttcacaaatgtatccagcttggtATG
Ttagccttactttcaaactttttttctgtaaatgtacaaaaagaaagagc
tagagaacttttttaaaataagactgataaacatttttttaaatcagaca
tcttcgagccaccatgacagttgtcctttgcggacaaagcttgaacatca
attgttttctgaaacaataaaaatacaatgatcgctctccatcgttttat
gagtcgtttatccagtgtataataaatctttggtaTAAGCATCCGCTAAT
GTCACAATACAAGTAATCAAGGCTGTTTCCCCATTTGTACTTTCAAGATT
TAACCCTACATATACATGTAACACTTGCCTTTCTCAGATAGAAAACCTAT
TTTACTGTTGAAGATGTTGAAGAAAGTTCAAGTGTCTGATAGTTTTGGTA
AAGACAATATTTTCTGTATTTGAATTCACTAATCAAGATTCTACCAGATA
TTTACCCTGACTCTATTAGAAAACATGAAATAGTCACATGAAATTACCAA
AACAATTCCAAGAAAGTCCACTTTTTCATTATAATAcattataatattat
tttgcTCATGAGAAAACGCCCTTCTGGTAGGGGGTAGTTTTATAACTTCT
TCCATTCTTAATTCTAACACTAcattttaattttgtatttgtaCATGATA
CGATCAATGTCAAAATCATATGTAATACTTTTGCTGCGAGTTAAGTTTCC
AACCTGCCAGATAATGATAATTTGGTTTTTCTTGCGATAAGTGTtctaat
tttaccaaaaaatttaatttatttttttcatcgattcaaaaaaaaatgaa
tttattattGTTCTTTTGGCGCTTCATAGTCACGTGATGTTAGACTTTAA
AAAGGGCGGCTGTCCGAAGCTATTCACAGGTTGTTAGATTGTTACGAAGT
GCAAGATGAACAGGAAAGAGCACAAAGAGTACTTTGACGTGAAATTTAGG
TCCTTACATAAGGATCTTAAGGTTGGCGAGAACGTGAATCAGAATTCAAA
TTCAAGTCGAAGCAAAAACAAGTTGAGTTTAATAACAACATTAAAGAGGA
CGTCGAGGGTTTATTGGGGCTGATTGAGGCTGGTTCAAAGAAGAGATCTT
CCACTTTGGCCAAGCAGATCATCGAAATTAGCTGATAAAGATTGCTGATA
AGTCTCCAGCTGGCTGGGCCACTGTTAGGGAGTACGATTCAGATAGCGTG
GCAGACGACAGCTCAGATGACACAAAAGAtaagtgtttttcttttgattt
taaactaaagtttttaagaaatgCATTTGATGCATTTGATAGCACTGAAT
TAGATTCAGGGGCTGTTAAAGGAAGGCTTAAGAAACAACATTATAGATAG
GAGCTAATAAATTTATTCTGAGCGTTATAAAAGAAGGTTACAAAATTGCC
TTTTCTATCCTCTCCGACCGAAAGTTTTCGTTCAAATAATCATTCTGCTT
TCGACAACACTgcttttgtgacgtcatcaataaaTGAACTTCATCAATTT
GGATCAGTTACTGAGATACTCGTCCTTCTGGCAAGCATTATTCTNGTCGA
TAAATGAATTTCATCAATCTGGATTAGTTACTGAGATACTCGTCCTTCTG
GCAAGCATTATTCTCGACATTCGACATGTCAATAGATTTTTGATCAAGGA
GCATATTAAGTTTGACGATTGGCGCGAATTCCAACATTTTGTACGTCCTG
ACggttttctttccaaattttcttgGGATTTTCTTGGGAACTGGAAAAGA
AGCCAAGATTTTTTGTACTTACAGTGTTACCATTTGGGTTATCTACGGCC
CCAGCCTTTTTTACGAAACTTTTAAGACCACTCGTTTCTACATGGCATTC
ACAAGGCGTAAAATTATCTGTTTACCTGGATGACGGAGCTTGTATAAACT
ACCCGTACGAATCTGCCGTTCAACCTTCGAAGTTAGTGAAAAGCCTCTTA
GATAATACTAGTCTACtagtaaatgaagaaaaatcggAATGGGAGCCCAC
CCAAAGAATGACCTGGCTAGGAATAGAGctaaatacttttgaaaatacTT
ACAAAGTTACAGAGGAGCGTGTCTCCTCTCTCCTCTCTTCGATTGCTAAG
TTATTAAATAATCCTCTTAAAACTGCTTGAATTCTTTCTCGTGTTGCTGG
AAAAGtagtttcaatgaaatttgttTTGTCAAACCTAATTAGATTGCAAA
CTAGAAGCATTTACAGATGTATTGCGGTAACCTCTTGGGATGGTAAACTG
AACATTTTGAGATTATATTTTGGAGagataatatgtctatgttaaACAAA
AGGAGCACAATTAgcatttgtcaaaacaaaattgttaTAAAGTCTGATGC
AAGCGATCATGGTATAGGTGCTATTTTTATTTGAAGCAAGTGGACGAAAA
GAATGTTTTCGTATGTTTGACGAAGGAGAAGTATCTAAAAACTCGACTTG
GCGCGAACTTGAAGCTATTCGATTTAGTCTTCAATCCTTTGCACCTAAAA
TATCAGGAAAGTCTATTTCTTGGCAAACCTAAGATATCAGGGAAGTCTAT
TTCTTGGCAAACCGAAAATATGGcagcaaaaaatttatttgctcGAGTGG
TAGTAGCAGTCTCTAGCTATAAATATTAACGATCTATCAAGTCTTTTCAA
TATAGACTTAGAAGTACGCTGGATATCATCTAGACGTTTCAATGTCTCTG
CTGACTACATTTCTAAGTTAGTAGACACCGATGATTGGGAGATCACAGAC
GAATTCTTTGAACTTATAGATAGTTTATGGGGTCCCCTGAATATTGATAG
ATTTGCTAGTTATAATAACACTAAATGTGAGCGATTCAACTCGAAATTCT
ACGTTCCTGGGACGGAAGCGGTGGATACATTTACGCAGGATTGGCGTTTT
GAAAACAACCGTTGGGTTCCCCCGGCTAATTTAATCACCCGGGTGCTGAG
AACTATCATATCTACGTATGGTATTAGAGTAGTTTTGATAATTCCGTATT
TGCGTTCCGCTCCATTTTGGTGACTGCTTCAAAACGGACcgatattttga
agttttgtaGTCGATCATATGGTTTTCAAAGCTACTGCTGGTATCCTGAA
GTTGGGCAACTACAAGTATTCCCTTCTCGGTTCTCCACATTATCGTGGAG
AATTGTGGCATTTTTAATAAAGAGTCGAGTTTTGGGTTCTGGGCCTATTT
GATAAGCTGCCCCACCTTCCCAAGTACTTTCGCCCAGTTGGGCAGGGTTA
GCCTTAGAGGTAACCCATTATTCCTTAGATTTTAGAAACTAGATGGGGTC
CTCCTATGCTCAACCGGGTTGAGAGAAATAAAAAGTGTAACTGGGTTACA
CCGTGGCTGGGCCACTTGCTCAGAAGGTTTTGTAAGAAAAATTGGCCTTA
TCAGGTTATTTAACCCAAGCTGACTAATTCTGCATTTTTAGGATCCAGCT
CGCTTCAAATCGTTAACCAGGTACAGGATGACCACCTGAAGTAACTAGCA
CACGGTTTACAAGACGTGCTGTCGAAATCAAGAGCGAATAACACGATTAG
AAAATATGCTACCTACTTCAAGTGTTGGTCAAACTGGAGTGCAAAGTTCG
ATGAAGTTGTTGAATTCCCTGCCAAAGACACGTACACGTGGTGCTGTTTT
TTGTCAGCCTCATACAGTCAGGAATATCATTCTCAGTGTTCGAAAGCTGC
TTTTACGCAATCAAACACACTCATAATGTCAATAACCAACCTGACCCAAC
TGATTCAGTATTGGCCAGTTATGCCTTAGAGGCAGCAAAACGTACTTGTT
CTAAGCCTGAAACGAGTGTACGAATCCATTATTGAGGAGGATCAGCAGTC
CCAAGTCTTATGAAACGAATTGAGGTCAATGAAAAGCTATTTGGGACCCA
CAGCATTTGTCGTGGAGGAGCCACATGTGCCGCCAACAACGGGGTAAAGG
ATCGTCTTTTCCAGAAACACGGTTAGATGGAAATCTGTTAGATGATAATC
TGGAACAACTGATGTCTGTTTCTTTGGGGCTAGGCCTCTAAAAGTTTTAC
AGTATATAATGATTATTTAGAGCATTTGATGTCTAATTCTGCGAGGCTAG
GCCTCTGGTgttatttcttatatttttcaatcgtGTTCTTCTGTTACAAC
TATTTACAGGGTTTTCTAGACGACCCACTAACGTGATAAGAAGAGATGAa
agtaaaatgataaataaagttattttcgttTTGTGGTCTTAGTGCAACAC
ACTTGACAAGGTTTGGAACGAAGAATGAATTCGATTTACGTGAATGTCTT
TAGCGTtcaaactgaatgaaaataaattaagaGTAATAAATATTTGATTG
ACAAAATTAAAGTAGAAATTAAAATGGATGACAATAAGACTTGAATGAAT
TGACCTAACTTAAATTAATCGTATTTTTAGAAGatgaaaatcagaaataa
acATAATTTAGATAAAACTAGCCTAAACTATCCTAACCTTAGTGGTCACT
GACAAAGAAGTGAGAAGCCTGTGCCAAAAGGGCAGATGTGAAAGTCTAGC
AAAGTTGAGCCAACTGAAGTCcacaaaagaaaacagaaaaggaCAAAAGC
TTACCGGCTGGCCCAATGTGAATTACTGTGATGAGTGACCAGGTTGTGTA
TAACCAACTGGGTTAAACAcatgaaaatgactgaaaagtCTGAGTGAAAT
ATCAACACTCAACCAACATGcaaaatagtaaaatttgatatgaaagtTCT
CTTCACAACCTTACTGTAAAAGCTCTCaacattgaatgaaaattgaatgc
aaTAAATGAGANTTCTGAGTGAAATCTCAACACTCAACCAACATgcaaaa
tagtaaaattgaTATGAAAGTTCTCTTCACAACCTTACTGTAAAAGCTCT
CaacattgaatgaaaattgaatgcaataaatgagaaaaaactGAGGAGAA
AATTGCTCCCTAATTATATAAATTCATTAAAGTGAGAAAAAGTATCTGGA
GTaattataaaacaaaagaaaataaatctaaAGTGTGAATGACATATAAA
TTAATTGAcagtaaaattaaacaaacaaatgaaatttttaattgattttt
aagtttttacattttttttgtagGAACACTTTCTGTATTCAAGTGTTCAC
ATGACACGTTTGAGTTtacgaattagaaaataaatgaatttattattgTT
CTTTTGGCGCTTCATAGTCACGTGATGTTAGACTTTAAAAAGGGCGGCTG
TCCGAAGCTATTCACAGGTTGTTAGATTGTTACGAAACCGCCCGCCCGCC
CACTTGTTAAGCTATTACGTCGTTACAGTCTCTCTGATTTCAAAGAGTCT
AGTCTTTGACCGCTTTAGTGCCATAGTATTAATATATTACTACATATATT
GGATTATATGATATTGATCTATAAAGAAGTGTTATTGTCAATAGTATTTA
TAAATATACATTTATATTTACTTTATTATCTTGCACATTTCGGGCTTTCT
AGACGACCCACTAACGTGATAAGAAGAGATGAaagtaaaatgataaataa
agttattttcgtttgagtttacgaattagaaaataaactAGCTTTAAAAA
TATGTCAAAGCTTGGAAAACTTGAACTAAAGTGTatagatataattggca
gtggaaacaagaatgcctgtaacttttgatagtccgaTATAATTGCGAAA
AATTCTTTTGCTTGGTTTAGAgaataaaaagctctatatttgaatgtatt
tttggttggaaaattcacgatttttagcggttaaatttgcgattgcaaaa
attgagcttttgtTTTTACTTATGCTAccacgttcatttttacaccagtg
gtagttcaaccttaggttaagaaggttgtcaaattggaaggcaaacggaa
aagtccttcggaagatatgggacccaaaATACCCCTTGTTAGCGCTTTCG
TGTGAAACATCAAATCTccatctttttaataaaaacgggggtagtgatga
tAAAACCGTTTTTcaatcataacacattttacgatctttttacgataatg
acctcatagccaaaacTGTGCTTAGTGTTTTGGGAAGTTTCAGAGTTCTT
TAattacttaaaaataacaaaggcaatacaAGTTCAATATGcttaaaatt
tcaataaaaacaatcaaattgtgatttcaattcgtttcgaaataatcaat
gataccaatgcatcaacacttaacactttccaatttttaattgcactgtt
caaaaaaagataacataacccccggtttcagtaaaaatttagattttcaa
tatttcacagaaaagtgctagcagggggtatttcgggtcccatatcttcc
caAGTTTCATGACAGTTCTCTGGTATATAAAGATAATTTGCATGTTTTGC
ATTCATAGATCGTTTCATGGCCATTCCGTTTACGTTTAGGTTCATCATTA
CACCTTCGAAACTCCAGCTCTGTGGTTGAACAAACTTTACAAACGCGttg
taaaaactttttcttgtgCTTATTTCAGGAACATAGGTATTTTGGTTAAA
AAGTGTCTGCATGTCAGTCTCTCATAATCCTCTGCTGTTGTATTGTTCAA
GTTATTTCTGACTTTATGCAAAACTGATTGATTTACAAGCTGACGAATTA
CTGACAATCGAAAATCAGTATGAGATAGCAGACTGTATAATTTTGATCGG
TACACCATGTCTGATTTTATGTTCTTTATATAATATGTACGAGTTTACCA
TACATACATTTAGAAGTCTGAAAACAACCTTTTTCCACCATTTCATTGTT
CTCTTTGATAAATGAGAATATTTCAATAACTGATCGTTAGCGTCTACACC
ACTCATGTATTTATTGTACTTGCTCATGACAAGCGGTTTCTGGATTGGTT
CACCTGTTCCGACCTCAAAAATCCATAGTGGCTCCTCCACGGCTCACTCA
CATTAGACTTTTAGCAtatactagccgtcacccggcgtcgcacccgccga
gtagagtgttgttgaacacatcaaaagccctttggatggtggaggagggt
aaaaattttttattgtaagCCCAAAGAACAAAATATTACCACTTTTCACT
GATCAAAACCCGGAAAACCGCATATTtcatgtttggtgacgtcattttgg
ccctaagtgacgtcatcgaaagggtaataaacttttcacttcactgaaat
caatttgtcatttatcaaaaagattctcttgatgatttccgatccaatga
ggggtcaaccattgcttaaatcctactcaaactcaagatattgtattttt
ccgtttttgatgacgtcatcggacccataAAGCCAGAGACGTTTATACCC
ACTCTTACCTTTCCTAACTTATTCTCTATTAAattcccgatccaatgagg
ggtcaaccatctcttaactcctttccaatctcgNAATAACCTTTTCCTAT
TTAcaacataataaaaattatggaacataaagtgttcttataaaataaag
agtCGGTttgtctaaaaagtgagtcggtctaaaaaagtgagtcggttggt
cggtctaaaagtgagtcggtcggtcggtctaaaaagtgagttggtcggtc
ggtctaaaaagtgagtgggtcggtcggtctaaaaaagtgagtcggtcggt
ctaaaaattgagtcggtcagtcggtctaaaaagtaAGTCGGTCcatcggt
ctaaaaagtgagtcggtccatcggtctaaaaagtgagtcggtcgatcagt
ctaaaaagtgagtcggtcgctCGGTCTAAAataaaagtgagtcggtcgct
CGGTCTTagaagtgaggcggtcggtcggtctacaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtcggtcggtctaaaaaagtgagtcggttg
gtcggtctaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtccgtcggtctaaaacgtgagtcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtcggtcggtctaaaacgtgagtcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtcggtcggtctaaaacgtgagtcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgaggcgggcggtcggtctacaaagtgaggcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgc
tcggtctaaaaagtgagtcggtcggtcggtccacaaagtgaggcggtcgg
ttggtctacaaagtgaggcggtcggtcggtatacaaagtgaggcggtccg
TTGGTCTACAAAGTGAGTCGGCCGGTCGGTCGTGGATACGaacatatttg
tgattgccgcctacaAAGAAAAGACTACCAAATTACTTGGATGTATTACC
ATGCAGCAAAAATATGCCACTCTCAATTTTCAAGAGGGCTAAAGTAAATG
TTTTCATTGGTCGGTCTttggtctttgtttattttgttaagaTTGTTGGT
TGCGATAAGCCCCATAATAATTTCTGAAGAACAACTGTACAAATCCATAA
CAAAATGTTCTCTATTTAAGAAACGGGATACCATGACCATTAGACCATTC
CCTATCCATGTACAAACGATGGCACCAGTGACCAGAGCAGAGAGACcaga
tcaatcaatcaatattaagaaaccaaagaaagaaaaagcaaaatagcTGT
CGAACTTCTTGCTATTCaatgttttatttacttttacgaaaattaccagt
aaagtagaatttcgaaaacggagatacgcttccgaaccgggcgacgtttc
ccgatcggcaaggaaccgTAGGGTTGTTTTCCGGTGACGTGTCTCAAAAG
AAATGtactccgcctcgaaaaaagaacactctactgttttcccgctcgga
gctcgatttaaaaagagacttggaaaataaatccataatggctcccccac
ggctcatagagaattagacttttagtatatagactagccgtcacccggcg
tcgcacccgccgagtagagtgttgttgaacacatcaaaagccctttggat
ggtgagGGAGGGTAATAGGCTTGAATTCTAAGtccaaagaacgaaatatt
accacCTATGACTGATTGAAGCTCGAGAAATCGCATATTTaatgtttggt
gacgtcatttgggccgtaaatgacgtcatcgaaaactGATGAATTGTTCA
CTTCTTTGAATGAAATGAATTAATTATTTACCCAAAAGATTATCtagatg
atttccgatccaatgggGGGTCNGATTATTTACCCAAAAGATTATCtaga
tgatttccgatccagtGAGGGGTCGatcattgcttaaatccttctcaaac
tcaaGATATCAGAttttcaggttttgatgacgtcatcggacccaaaatgc
ctcagtttgaatatatttattttcgaaaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATCCAAACagtcggtcacgtaactctcgaacc
cccatctcaaaaatccataatggctcccccacggctcatagaaaattaga
cttttagtatatagatagatagaagaTTCACGTGTAAAAgtaatataaaa
tcaaaatgacaaatgaaaaagtaaCAGCAGTACCAATTGAAGACGAGAAA
GTCAAAGCATGGGTTGAACACATGTACAGTATAGGCGAGGACGAGTTGCG
AATGATCAAACCTTACAATCAAGTCCTTCGTAAAGGTTATATGGAGATAC
ACGATGATATACAGAATTTCGAAACAAGAGAGGATGACGTATTCATATGC
ACTGCTCCCAAATCAGGTGAATTCTTAATACTACTTCAAAGTGGAAAGGG
TTATAATTTCTAACGAAGACGTATACTGTATTATaaggaaaaattttcat
ttgcttcctATAATAAATGATATGATTACTCATATCAGATAGTTTTCAAA
TATCATGCTGACAGTATCATAAAGATGTATATATAAGTTTGTGTTATAAT
TTCAGGTACGCGTTGGATGCAAGAAGTCTTGTGGTGTTTACGGAATGATT
GTGACTTCGAGAAAGCCAACAAGGTTTCCTTACAAGTTAGGACACCCTTT
TTAGAGTACGTGAAACTAAAATACCTCGTTGGGGCTTCGTTACCTTGCCT
ATAAAAATATACCGGCTTACATATGAGTCCTCGTGTCTTTCCAAAACTAT
TTTGTTAAATTATTGGGCCAATAAACAAAATCACAGCCAATCCATTTTAC
GGTTGTTTTAATTTCAGCGCGAAAGCAGTTTTACCGGTTGGAGCCtttac
agaaaatttttttgaaagaatctCAAAGATGGAAGGACCAAGAACTATCA
ATACACATTTTTGTTATGATATGTTACCCAAATCTCTTCACGAAGACCAA
AAAGGAAAAGTAAGACAAAATAACCCTTTTATCATATCTTTGATTTCTAG
GCTTTTCTTAGACTGAAGATGAAAATTACAAGGACATATCAACATCATAT
GAGGATTGGAATTAGATTTAAACTCATGATTTTTCGCAATTTTAGTACCC
TGGTCTATCGAATAGACCTTTCCCGGAGACTCATTCGGGAATTTACAATT
TAACGAGTCCATAATTCCACTTTTTTTTCCTCAGATCGTTTCAGTTATTC
GGAATCCTCGTGACATTTGTGCTTCATTCTGTCATCACTTCAAACTGACC
GACAAATACACAGGAGGTGTTGAACTTCTGGCTGATGTTTATATGCGTGA
TGTTGGACTTTTCTATGGACCTCATTTCACCAACGTCTTAAGCTATTGGA
GCCGTCGAGAACAGGTATATATTTGAGTCGAACCTCATCAAAAATTAGGT
GAACCTAATAGGAATATTCAAAAGGTTTCtatacatcgttggaaagataa
ttttatcagcttttcgAATGAAGGTTAAAGTCAGTTTGTAGGTGCTagag
aaaatcaaaaaggaaaaaatacaaGTTCTCATTTTCGGAGTATTTTTTCC
AAGGATCTCATTTCACGAACtttatttgatttatttgaACCGGAGATAAC
AGGTAGTGAATAACCAGTAGGGATCATCACCCAATCCAACTGGATGTGAA
TAGTGCAACAAACTTGATTATGAATAACTGGAAAAACTACTAGAGTTTGA
CGTTTCAATCAGAATTTAACCAAATTAGTCCCTTCATTCTTTTCTTTAGG
ATAACATTCTGATCGTTTCCTatgaagaaatgaagaaagattTGGCGTCA
GTGATCAGAAAGATTGCCGACTTTCTTGGTAAAGAAATAACAGATGAGGA
TGTAGCAAAGATTGTCGATTTCACCAACAttgaaaatatgaagaaaaatc
CCATGAGTAACCTGGAAGAACGAATCAATGTAAGAGTgttaatatttctt
tattataTACTTTTGATTCCGAACTGTCCATGTTGGAAAGGATTATATAA
TGATTACTTTAAAAGAGTGATTCAGATTTATTTGCTTGGATCTTTGAAAT
tctgtttttcatttaaaagGATTTTTATCTGATATTACAATCCGTGAGAC
AAAAAAACAAGATAATTTACTCTTAGAAGGAGGCGCCAAAGTCAGAATTT
TCGCATATTGCCTCCGCAGTGTGACACATATCTGGTCTGCCTACCACGCT
AATGAACCCAATATACCGTGCAGTTTCAATATATGGAGGAAGAAAGCTCA
AGAGCTTTTCAAACTGTGTCTTGTCTTCAACCAGATCTATTTAATTGATT
CAGGGATCTGCTTATACGATAGAGGGATAGTAATcgcaggaagaaaaaaa
atatatagtttatagaagtataaaaccttcaactactcaaagtGGAAACA
CTAAAGACAAAACCCACAAAAAAAAGACAATACGAATtgcaacaaaaatc
tagaatgaacattcacagaaaatcgaTCAGGTTGGAGTTGAAAAGAAACA
TGTAatgacatagaaatccgtcaatgtaaaactagtgatctaaaatgact
ATAAGGAAGAAAGCagctcaatatgagttaagatggaaagaagtaactca
atatgagtcaaaaaatatttcaagaaaccTAATAAtatgttcctcagttt
tcgacctacacaggatttcggcctttaacgaaaatatcctcctatatgat
ggaaatagggttgtgtaggtaggccaagcagtgttaattagacatcacca
cagataaaagatagtaaaaagatgtgtttagtgaAAGTATAAAACGCGCG
CAACAATATAGAATAaactaaaacgtaaaaaccacggaaccagccgaaga
aactaaaataacattGAGAAAAGAAGTACTACTAGACAAAGCtgccacac
ctttgacacgtttctgccacaGCGTTGAAGAAAGCATACTAGAAGAGAAA
GAACTGGGATTGGATTGCCACTTtccaaccctgtggctctcacacacatt
ttacagttcaaagaataagatggaaagagtggtgaaagaatgagaattta
aaaatatatatatatgcGCAGTAGAGTCAGGGCATCAGGGCGTCAGAGGG
GTTAACAGAAAATATAGTGGCAGTAGAGTTTGGAGCACTGTTaacacctc
cgccactgttTACTCCGCCCCGGGCTAACAACTCATTCGTAAATTTTCCC
GCCtactaaactattccctttttagtgatcttgtgtaaaTGATAGGATTG
TCTAGAATCTGCCCTAATAATATCTACTTTTGAATCTTTCAGATGATCAA
ACGTTCACAAAACAACACAGAAGAAAAAGGGACATTCATCAACAAAGGCA
AAACAGGTGGTTGGAAGACTGCTTTCACTCAAGAAACTATTCAAAGATTT
GAAGAATGGGAAAAGAAACATTTAGAAGGAACTGGACTAGCCTTCATTTA
CGAATTATAAAAAAGTGGGTATAGCAAATGAAGAAGGTAACGGNCTCCTT
CATTTACGAATTATAAAAAATGGGTATGAAAGAAGGTAACGCCCTCAAGC
ATCATCATCAATTCTTGTTCGTTTGAACAAACTGTATAatttaatagacg
atatcgactttccgtgaatttttttgcgcatgcatcatgggtaatcattc
ggggagaattcggaaagccgatatcgtctattaaatAAGATACTGTTgtg
cgcagttttgtaatttttgtgcagtttaatattttccgcgcagttttgta
ttttattgcgcagttttggaatttttctatgcagttttgtaatttcgaG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00053605-exon-scaffold_233-1491911889:1218185..1218415 | TCONS_00053605-exon-scaffold_233-1491911889:1218185..1218415 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1510915933:1218185..1218415 | TCONS_00053605-exon-scaffold_233-1510915933:1218185..1218415 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1575043694:1218185..1218415 | TCONS_00053605-exon-scaffold_233-1575043694:1218185..1218415 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1491911889:1218608..1218707 | TCONS_00053605-exon-scaffold_233-1491911889:1218608..1218707 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1510915933:1218608..1218707 | TCONS_00053605-exon-scaffold_233-1510915933:1218608..1218707 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1575043694:1218608..1218707 | TCONS_00053605-exon-scaffold_233-1575043694:1218608..1218707 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1491911889:1219674..1219815 | TCONS_00053605-exon-scaffold_233-1491911889:1219674..1219815 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1510915933:1219674..1219815 | TCONS_00053605-exon-scaffold_233-1510915933:1219674..1219815 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1575043694:1219674..1219815 | TCONS_00053605-exon-scaffold_233-1575043694:1219674..1219815 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1491911889:1220635..1220814 | TCONS_00053605-exon-scaffold_233-1491911889:1220635..1220814 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1510915933:1220635..1220814 | TCONS_00053605-exon-scaffold_233-1510915933:1220635..1220814 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1575043694:1220635..1220814 | TCONS_00053605-exon-scaffold_233-1575043694:1220635..1220814 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1491911889:1235434..1235613 | TCONS_00053605-exon-scaffold_233-1491911889:1235434..1235613 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1510915933:1235434..1235613 | TCONS_00053605-exon-scaffold_233-1510915933:1235434..1235613 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1575043694:1235434..1235613 | TCONS_00053605-exon-scaffold_233-1575043694:1235434..1235613 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1491911889:1236977..1237170 | TCONS_00053605-exon-scaffold_233-1491911889:1236977..1237170 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1510915933:1236977..1237170 | TCONS_00053605-exon-scaffold_233-1510915933:1236977..1237170 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1575043694:1236977..1237170 | TCONS_00053605-exon-scaffold_233-1575043694:1236977..1237170 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1491911889:1237220..1237483 | TCONS_00053605-exon-scaffold_233-1491911889:1237220..1237483 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1510915933:1237220..1237483 | TCONS_00053605-exon-scaffold_233-1510915933:1237220..1237483 | Clytia hemisphaerica | exon |
TCONS_00053605-exon-scaffold_233-1575043694:1237220..1237483 | TCONS_00053605-exon-scaffold_233-1575043694:1237220..1237483 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_233 | supercontig | scaffold_233:1218185..1237483 + |
Blast
BLAST of TCONS_00053605 vs. Swiss-Prot (Human)
Match: ST1C2 (Sulfotransferase 1C2 OS=Homo sapiens GN=SULT1C2 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.814e-42 Identity = 94/278 (33.81%), Postives = 151/278 (54.32%), Query Frame = 3
Query: 174 IQNFQTREDDVFICTAPKSGTRWMQEVMWCLRNDCDFEKANKVPLDFRTPYID-AKAVAPDGTFTENLVEKISKMEGPRSIKTHLSYDMLPKSLREDQIGKIVSVIRNPRDICASFCHHFKLTDKYT--GGVELLADVYMRDVGPFYGPHFTNVLSYWSRREQDNILIVSYEEMKKDLASVIRKIADFLGKEITDEDVAKIVDFTNIENMKKNPMSNLEERINMIKRSQNNTEEKGTFINKGKTGGWKTAFTQETIQRFEEWEKKHLEGTGLAFIYEL 998
IQ+F+ + DD+ ICT PK+GT W+QE++ + + D EK + + R P+I+ A+ P G VEK M PR +KTHLS +LP S E+ K + V RN +D S+ H ++ G E + ++ + +G F +V +W +++ IL + YE++K+D IRK+ F+GK++ + + KIV T+ E MK+NPM+N R + K + + +F+ KG G WK FT +RF+E ++ +EGT + F EL
Sbjct: 32 IQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQHRHPFIEWARPPQPSG------VEKAKAMPSPRILKTHLSTQLLPPSFWENNC-KFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFI-NGKVVWGSWFDHVKGWWEMKDRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTN---RSTVSKSILDQS--ISSFMRKGTVGDWKNHFTVAQNERFDEIYRRKMEGTSINFCMEL 296
The following BLAST results are available for this feature:
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