TCONS_00053508 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053508
Unique NameTCONS_00053508
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2603

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053508 ID=TCONS_00053508|Name=TCONS_00053508|organism=Clytia hemisphaerica|type=transcript|length=2603bp
AgataaactaaaaaaaaaataaataaaaaaagttaaaaaacagAAAGATG
AGACTCACAGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTTCG
TGACAACACAGACAGGATAAACCACATCGACTACACTTCCAACGGTGAAA
CATTGATCACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTTTT
GATGGAAAACAGAAGAAGACATCAAATAGCAAGAAATATGGAGTATCGCT
CATTCAATTCACTCACGCATCAAACACTGTTATACACACCTCAACCAAAG
TCGACGATACCATTCGATACTTGTCACTGCACGATAACAAATATCTGCGC
TATTTCTCTGGACATACCAAAACTGTTGTCTCCCTTCACATGTCACCTGT
AGATGATAGCTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGGG
ATCTTCGCTCCAACAACTGTCAGGGTTTGATGCATGTGAGCAGTCGACCG
GTGACATCTTTTGATCCTGAAGGTCTCATCTTTGCCGCTGGTGTTGATGC
TGAAATCATCCGTCTCTATGATCTAAGAACGTTTGATAAGGGTCCATTCG
CTACATTCAATCTACCGCAAGCAGACAATGGTGTTGAACTTTCTGGTATC
AAGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAACAACATCAGGATT
GGTATATCTGTTAGATGCTTTCCAAGGCAATCTTCTTCATACGTTTATGG
GTCTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCT
CCAGATTCACAATACGTTTTGTCAGGTTCATCGAACGGCAAGATCTACGT
GTGGTCATCGGACAGCGGTAAACGGATAACCGTGCTGGATGGTATGCACC
CTGGAAGCACGCAATGTGTTGCTTTCAACCCCAAATACATGATGTTCGCT
TCTAGCTGCTCTAACCTTGCATTTTGGATACCAGATTTGAACGAAGTTGA
CAAATAACCTTCAGACCCGGAAAAACAATCGCGCAACGCCGTTGAAAACA
AAATGGTTAACAGGAGAAATGACCATTATTGGACCTTCGAATTGgcgaaa
atgaaatatttgttcCTATTGAGATAAGTTTACTCATTCTCAGCAACCAA
ACCATGAACTATAAAATCCAAAGAGACTATAATACACAGACATCTACTTG
AAAACGTCAACTTGAACTGATTTGTGTCGTCCGTATATTTTGCACTATAA
GGAAGCAACTCCTTGGTGCTGCAGACATCATTTGTCTGACCACATTGTAT
AACTTGACGTGCAGGTTACTCTCCGGAGTTTACGAAAACCTGTTATTTTG
TCGAAGTTTACCGAAGAATGTAGATATTTACTAGGCCCTTCAATGTTACA
AATTTTATTGggatttttataaaaggaaaGGTAAGGGTTTGGAAACTTGT
gtataaaatattgattttttggaaatttttttattgaacaaaaaaaaact
gataCAAAGTAAAAACATAAATTTAGTTTTTCCCTACTTACAAAGCACTT
GAAATCATGCTCTACCGATACAAATTTGACGACAGATCAATCATAAGCTT
TTGTACGTATGAAAGATTTTATGAATTTTGCTTCAACCAGCTTTCTAGTT
TGTTAAGATTATAACCATAAGGTCCTTGTCCTCCATCATACACCACTTTC
CCATTTTGGATCACATACAAGCGATCCGGGAGACCAGCGTATGCCTTGTT
AGCTTCGTTCGTCATGAAATCGATCAAAACTGGACAGTTCTCATTCAATT
TGATTGGACTCATTTCGAATAATTTTTCAGCTGCTTTGATTCTTTCGCTC
ATCTCTGCCTGTTGTTTGATTTGTGGGATATAAGTTGTATATTCATTATC
CTCCATAGGGTGCGCTTCTTGTATGTAGACTGTCACAAAGTCGACTCTCC
CTTTAAAACTCTCACATAGATCAGCAAGACGATCGAGAACAGCTAAGAAC
GGGGGTCATGTACAATTTCCAAAATTCAAAACCAAAGGTCGAGATTGACG
TTGAAAATCTAATAATTTCTTCTCCATCTTACTGGCAAGATCGTATATCG
GTATGTTAGGTGCGTCTTTGTAGAGAAATGCTTTTCTGCGAGCATCTAAC
AAAGATACTTTTAATCTTTTTGCGATGAAACGATATGTACCAAGGAACTT
CATTCTCTCATGGATAGCCAACGTGAAAGGTACACTCATTTTCTGATTCT
TTGCTTTTTGTTCTTCAGTAGCGTAAGTGACCATTGGATAACCAGCCAAT
ACTTGCATCATTTTCTCCAATTTGGCAGGATTTAGGACGTACAACACTCG
CAATTTGATTGCCGTAAAAATTAGCCATGGTAGTGTGATGAGATATGTTT
TGAGCACACGTAACCATTCTTGTGGGTCGTTGAAAGTCTGCACCATTTTG
CTTTTAAAAGCTGTTAATCTCTTACTCCGTCATTTTTCTTTGCTGCCAAA
CGTGTTGCCTTAATAAGTActtcaaatgtttttctctttAATCACTTTTT
TACGCAGCACAAAACTTAATTTGCTGCAAATTACGAGTGTAATTATTGCT
GCA
Run BLAST on NCBI

transcript from alignment at scaffold_232:44293..53608-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053508 ID=TCONS_00053508|Name=TCONS_00053508|organism=Clytia hemisphaerica|type=transcript|length=9316bp|location=Sequence derived from alignment at scaffold_232:44293..53608- (Clytia hemisphaerica)
AGATAAACTAAAAAAAAAATAAATAAAAAAAGTTAAAAAACAGAAAGATG
AGACTCACAGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTTCG
TGACAACACAGACAGGATAAACCACATCGACTACACTTCCAACGGTGAAA
CATTGATCACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTTTT
GATGGAAAGTAAGATTTTAACATCGTCAACTATCATTATTGACATGCTGA
TGAAGTCACGTAAAAATGATGAAAATTTCAAGTTAAAAGTGGTTGCTTCA
TTTTTCTGTCTTATCAATTTGCTGCTTCTACACTTCAAAATTTTCTATCA
TTATGAGAAGATCTTACTACACGCTTTTTTTTTATAAGAATACACTTTAT
AAGAATGTCCATGATGAAAATGGCCAAAAAATTTAGAATATTGTAAGAAT
ATCACCATCATGGAATTTAGCAACTGAACCTAAGAATGCCATTTTTAAGG
CATTTTAACCTGTAGATTGCTAATTTCGATCTTAACCTAAGAATGTTGTA
AGAATATCTTTGGATGATTTTCGCCAAAAAGTTAAGAATATCCATCATGA
AATGAAAAAGCACCATTCTTATAAAAAAAAGCGTGTAGTAGAAGAAGTAA
AATTATTTTTTTCTTTTTTTAAACAAACGTTCTTATTGGCGGTCATACTG
TTCTTAAAAGAACTGAATCAAAACGGAATTTTGATAGGATCGTATCGCTT
TGTCATGGGATTGACCGTATTTTAGAGTGATTTCTGCTACAATTATCCCT
GGCCTAAAATCTCAGGTTGGCAGCAATATTATGTATATAGAATTTATTCT
TTCAAATAAATGTGTTTCTCTCCTTTTTTAGACAGAAGAAGACATCAAAT
AGCAAGAAATATGGAGTATCGCTCATTCAATTCACTCACGCATCAAACAC
TGTTATACACACCTCAACCAAAGTCGACGGTAATACATCTCGTTAATTTC
TTAGGTTTTATTATATTAATAAAATCTGTTTTTAAAAAGCAATTTGGACG
ATATACCATCTATGTTTATAACACTTCCTAAATAAAACACGGATAGATTC
GTATTCGTATCGTACTTCGAGTACGAAAAAATTAAGAAATGGGATTAAGA
TTTACAGATTTAGTTGTCATTTTTTCACTTTCATCTATTTAGATACCATT
CGATACTTGTCACTGCACGATAACAAATATCTGCGCTATTTCTCTGGACA
TACCAAAACGTAAGTATTGGCATACAAATCTCCATAAAATTTGATTGCAT
TGAGTCTTGTCTAACATGAGATTTACGAATTAATTGATGTTGTTTCTTGA
CCTTCTCCTTAGCCTTTGTTGACTGCTCTGTCAAGCGAAATAAATATTTC
TCAATATTTGTTTCAGTGTTGTCTCCCTTCACATGTCACCTGTAGATGAT
AGCTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGGGATCTTCG
CTCCAACAACTGTCAGGTAACTACTTTCGAAAAAAATAAGTAACCATATT
TTACTTTTGTTGCTAAAGATTTATCTTCGATCAAGTTTATCGCTCATTCC
ATTCGAATAAGTTGAGATTCCAAATTAATACAATTTTGTAGTTCAATCGT
TCTTTTATTTCTTCGAAAATCTCTGATCAACGTGTGTGTCCATGCAAAAA
AATTTCAAAGAAAATCGTCTAAAAATTATCGACCTTTAGTCATCATAATA
AAAGACAGACAATAATTTCGTTTGTATTTGTGTTTTGTTATTCAGGGTTT
GATGCATGTGAGCAGTCGACCGGTGACATCTTTTGATCCTGAAGGTCTCA
TCTTTGCCGCTGGTGTTGATGCTGAAATCATCCGTCTCTATGATCTAAGA
ACGTTTGATAAGGTTGGTATTTCCCTCAATCTTACAAGTGTGAATAGTTT
GATAAAAATATTTCGTTTAATCATTCTTTGCCACGGCATGACATCACAAT
TGGGGAAAACAGAACACTTACTAAAGATAATTATGTGTAATCATCAAACA
AAATCTTTTAGTGAGTTAAACCATAGTGTTTGTTTTCCCCTCGCAATACC
TTAACCCTATTCGGCCTAGGGGGGGGGGGCTCTTTCTGTTTGGAGGTCAA
ACTATTGGTAATAGCTCCTGAAATAATAGAGCTTTTGCGTTGAAATTTTC
TGTAAATTCCCAACTTTCATTTTGATTCAAATTTAAAAAAAAATTGACAC
TTAGATATTTTCACACCTTGAGCATGATGACATTTGTGACAGTAAGGTGT
CACAAAAGTTGACACTTTTGCAATACAAATTTATTTTTAATGTCAAATAT
ATCGTTTAAACCGTAATTTATTGAATATTCAGGATAAAATAAGCATTTTA
AACTCAGGCAACTTTTCTCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGT
CAAAAGTTACCTTACGTGACAAGGATCTTGTGTGCCAAATTTCATCCAAA
AAGACCCATTAGATCAAAAGTTAAGGGGTGGTACAGGAAAAGGCCCCTCC
CTATTTCTGAACCGCCCCTAAAAGCCTATGTTGAATAGGGTTAAAGGAAG
AAATTTTGGCGGAAAGAAAATTTGGCGGATTTGGCGGATTTAGCCAAAAT
CCGCCAAATTAAGTTCCCGCCAAAATTTATTATTTCCTTCATCCGCCAAA
TTAAATTCCCGCCAAATTTATTTTATTTAACGCATTCCCCAAGTTGGTGC
TATTTCAGGCCTTAAAACAGGTTTTTTTACTTATTTGATATAGATTTTGG
CCAAAAATATCCTGCAACCGCCAAATTTAATTCCCGCCAAATTTAATTTT
TCCAGCAAAGTAAATTTCCTCTGAAAAAATGTTTTCGACCATCCGCCAAA
TTAAATTTCCGCCAAAATTTCTTCCTTTAAGGTAATTAAATCTTATTGGT
TGAAAAAGATGTCACATGACTTTCCGTGGCAAAGAATCATCGTCATCATT
GAGAACGTTTTGGACCCTTTTTGGTTCTTGGATAGAACCTATATTCTCTG
ATTGGCACTCCTTTCTGATGCCCAAAGTTTCAAGCTTTCAAAGAAAAAGC
TCTATTCACCACCAAAATCCCCATAGTTCAAAACCACTCCCTATCTCGAC
TAGTCCATAATCACGTTACGAAGGTTATGACTTATTAAATGTCTACCCTA
CTTTTGATTAATGAAGTAAATATGAAAATCTTTCTTCATTCCGAAATTTA
AAGGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAATGGTGTTGA
ACTTTCTGGTATCAAGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAA
CAACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGCAATCTTCTT
CATACGTTTATGGTAAGATAGTTTTGTGTATTTTTGGTGTCGCTTGCTTA
CAAGTTTCATTTACCTAGAATCTAAGTATGTGGTATGTGGAATTTTCCGG
TTAATTTTTAAGTTAAATCCTCACATGTGTGCTTAGTGAATAACCTGGGA
TCTTATCTGAATTTTAATAAAAAGGACCTGGACTTTTCGGGTTATATGTG
AGTTTATACACTGTTGTTGAACTTTTTTTCAAATTTGAAAATTGTATTTG
TTTGTGTTGTTGTGCGNCCTTAAAACAGGTTTTTTTACTTATTTGATATA
GATTTTGGCCAAAAATATCCTGCAACCGCCAAATTTAATTCCCGCCAAAT
TTAATTTTTCCAGCAAAGTAAATTTCCTCTGAAAAAATGTTTTCGACCAT
CCGCCAAATTAAATTTCCGCCAAAATTTCTTCCTTTAAGGTAATTAAATC
TTATTGGTTGAAAAAGATGTCACATGACTTTCCGTGGCAAAGAATCATCG
TCATCATTGAGAACGTTTTGGACCCTTTTTGGTTCTTGGATAGAACCTAT
ATTCTCTGATTGGCACTCCTTTCTGATGCCCAAAGTTTCAAGCTTTCAAA
GAAAAAGCTCTATTCACCACCAAAATCCCCATAGTTCAAAACCACTCCCT
ATCTCGACTAGTCCATAATCACGTTACGAAGGTTATGACTTATTAAATGT
CTACCCTACTTTTGATTAATGAAGTAAATATGAAAATCTTTCTTCATTCC
GAAATTTAAAGGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAAT
GGTGTTGAACTTTCTAGTATCAAGTTCAGTAACGACGGTAAAAAGATATT
GGTCTCAACAACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGCA
ATCTTCTTCATACGTTTATGGTAAGATAGTTTTGTGTATTTTTGGTGTCG
CTTGCTTACAAGTTTCATTTACCTAGAATCTAAGTATGTGGTATGTGGAA
TTTTCCGGTTAATTTTTAAGTTAAATCCTCACATGTGTGCTTAGTGAATA
ACCTGGGATCTTATCTGAATTTTAATAAAAAGGACCTGGACTTTTCGGGT
TATATGTGAGTTTATACACTGTTGTTGAACTTTTTTTCAAATTTGAAAAT
TGTATTTGTTTGTGTTGTTGTGCGACATTGTATTTTGCGTACTTTTAGGG
TCTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCTC
CAGATTCACAATACGTTTTGTCAGGTTAGAAAAACTTCGTGTATACATAG
CTCTTCTCTGTGCTGATTACTATAATCCATACAAACTTGAATTAAATATT
GCCACCACCTTGTAAATCTTCAAAATAATGCTTGTACATATTTTTACAAC
GAATTAATAGTCTTTTCCAAGAAACCAAGGAATGAGCAGTTAATCTATAC
CCCCCCCCCCCAAAAAAAAGCTGAATTAAAAGTGATTGGGCTCCAGGTTA
CCTGCTTCTAATGGCGTTTGATGTCTTCTAAAGACATTTTACGCCTTTCC
ACACTGGTGAACTCAAACCTGATTAAATTTATTTTGTTTTTGCTCCCATC
ATCTCTAGGTTCATCGAACGGCAAGATCTACGTGTGGTCATCGGACAGCG
GTAAACGGATAACCGTGCTGGATGGTATGCACCCTGGAAGCACGCAATGT
GTTGCTTTCAACCCCAAATACATGATGTTCGCTTCTAGCTGCTCTAACCT
TGTAAGTGTACCTTTCGACATAATTTGCTTTAGGACTATTTTCTAACCCA
ACAAATCAATGATGAAATAAGAAAATTAGATTTGAATTTTGGTGTTTTTC
AAGAAGGGGATGGGAAATTTTCGAGAATGTCTCTATTATCTGTCACTATC
AGTATGTTGGGCAAATTCGGGGGAATAAAGAAATTGAGGCAAGAGATATG
ATACTTTCTCTTTTTCACTCTTCAAAACAAAAGACATACAATCTAAAGTC
CTACTGCATAGAACAAATATTTATCATGTCCAATTGACATTTATATTGTA
AAAATGTTTACAACCAGACTTTCATACGTTCATAGTCAGTATATTTTTTT
GATTAAAGTAAAACCAAAGAGCGTTAAATATTTCTAATGTAAACCAAAAA
CAGAAATTCAATGTGTAATATTTCGTTAAGAAAACTAAGCATTTTCATTC
AGCCATTTTTCAAGTTTATTCAAGTCATACCCGACTGGGCCTATGCCTCC
ATCATACACCACTTTCCCATTCTGGATCCCATACAAACGATCTGGGAGAG
CAGCGTATGCCTTGTTAGCTTCGTTCGTCATGAAGTCAACCAGCATTGGA
CAGTACTCTTTCAGTTTGGTTGGAGCAGATTCGATCATCATTTCAGCTGC
TTGGATTCTTTCCTCCAACTTTGTTTGTTGTTTGATTTGTGGTATGTGAG
GAAGATCTTCGTTCAAATCGACCGGGTGTGCTTCTGTGATATAAATCATG
ACAAAGTCAGCTCTATCTTTGAAGTGTTCACTAAGTCCGGCCAGGCGTTT
AAGAACACCAACTAGCGGGAATCAGGTGATATTTCCAAAAGTCAATACTA
AAGGCCGGCATTGGCGTTGGAAATCTAGTATTTTCTTCTCTGTTTCGTCC
TGTAGATCATACACTTTGACGTTGGGTGCCTCTTTGTTGATGAATGCTTC
TCTACGAGCGTCCGCTAACGCGATTCTGAAGCGTTTTAAAGTTTGTTGTG
GTCTGCCAAGAAAGTGATGTGTTTTGTTTTTGTCAAAGATGTAAACTATT
TTATGGTAGAGTGTTGTCAAAATCAACATTGGTAGGGTGATGAGATATGT
TTTGAGTGTGCGGACCCATTGTTGTGGGTCGTCATAACTCTGTATGTAGT
TTATAGTCCAACTTGTTTCTAAGTTGAATAACATTTTAACCCTCGCACGA
ACCACTAAACCATTTCTTTTGCCCTCCTTGTCAACTTCTTCCTCGCTGAG
TAAAAAGCAAAGGCTGAATAAAATAAACGATAATTTTCAACGAAATGAAA
AATGCAGAGTAATGCCTCTTGATTGAAAAGAAATTATATTACATAAATCA
AAGTATTGATTGACATTTGGTAATTACCATTTACATTCGGTTATTTTTAG
TGATGTATAGATAGCTTAACTTCACAGTGCCACTGTTGTAGAATCTTATA
TTGTGATACTGTGTGTTAGTTTTTAGTAAAGCTTAGATTACTTTTTGGAC
ATACCCCGGGGGAGGTCCTATGAATTAACCCATGTTCGGTCGTGCGTTCG
TGTGTTAGTTACAAACTTTTCTTAAGATTGGCTCATTCAAATTTTCTGAT
GTTTGGCACAAAGGTACATGACTCCCTCGAAAGTGACAGAGCCCGATTTT
AGAAGAAAAAAAAATTGGGCAAATTTGGGCCGAAAAACGGCTAAAAACGG
TTTTTTGGACTTTGTGAAAAATTGGATCATTAGTTTTTTCTGATTTTTTT
GCATGAAAGTAGGGTACCATCATAGGTAAAACATGGCTTAAGCAGATTTT
TGCAAAAAAATTTTCGGCTCAAAAAACGCATGTTTATCTATAAGAATCAC
TATTAATAAGCATACATCAATGTTCTTAGCCGAATTAGTCAATTTTTTGA
TGAGATAGATGTTTTTCTGCTCATAAAGATTTACTTTTGAAGAATATGTG
TGTTTAGACATGAAATTTTGGTTGCTAGACGTGTTTTTATAGAAAATGTG
ACCAAATTCGATATTTTGTTACAAGCCTATTACCAATTACTTAGTTATTA
GCTTTTCTCGAGATTGGCTCTTTCATTCTTTATGATTTTTTGCACAAAGA
TGCATAACTATAAACCCTCGAATGTGACGGAGCTCGATTTTCGATTTTCT
AAACGTGTTTTTTATAAGAAATAAACGACGAATTTTAATATATCGTCACT
ATTTGTGTTCTGAATGATTGTTTAATGGTCACACTCACGTAGATATCAAT
TATAAATGTGTTAAATGCATAACCAGGTAGGTCCATTAAAGTATCGCTTG
TTTGTCATTTATTTGCTCTTTTTATCTACAGGCATTTTGGATACCAGATT
TGAACGAAGTTGACAAATAACCTTCAGACCCGGAAAAACAATCGCGCAAC
GCCGTTGAAAACAAAATGGTTAACAGGAGAAATGACCATTATTGGACCTT
CGAATTGGCGAAAATGAAATATTTGTTCCTATTGAGATAAGTTTACTCAT
TCTCAGCAACCAAACCATGAACTATAAAATCCAAAGAGACTATAATACAC
AGACATCTACTTGAAAACGTCAACTTGAACTGATTTGTGTCGTCCGTATA
TTTTGCACTATAAGGAAGCAACTCCTTGGTGCTGCAGACATCATTTGTCT
GACCACATTGTATAACTTGACGTGCAGGTTACTCTCCGGAGTTTACGAAA
ACCTGTTATTTTGTCGAAGTTTACCGAAGAATGTAGATATTTACTAGGCC
CTTCAATGTTACAAATTTTATTGGGATTTTTATAAAAGGAAAGGTAAGGG
TTTGGAAACTTGTGTATAAAATATTGATTTTTTGGAAATTTTTTTATTGA
ACAAAAAAAAACTGATACAAAGTAAAAACATAAATTTAGTTTTTCCCTAC
TTACAAAGCACTTGAAATCATGCTCTACCGATACAAATTTGACGACAGAT
CAATCATAAGCTTTTGTACGTATGAAAGATTTTATGAATTTTGCTTCAAC
CAGCTTTCTAGTTTGTTAAGATTATAACCATAAGGTCCTTGTCCTCCATC
ATACACCACTTTCCCATTTTGGATCACATACAAGCGATCCGGGAGACCAG
CGTATGCCTTGTTAGCTTCGTTCGTCATGAAATCGATCAAAACTGGACAG
TTCTCATTCAATTTGATTGGACTCATTTCGAATAATTTTTCAGCTGCTTT
GATTCTTTCGCTCATCTCTGCCTGTTGTTTGATTTGTGGGATATAAGTTG
TATATTCATTATCCTCCATAGGGTGCGCTTCTTGTATGTAGACTGTCACA
AAGTCGACTCTCCCTTTAAAACTCTCACATAGATCAGCAAGACGATCGAG
AACAGCTAAGAACGGGGGTCATGTACAATTTCCAAAATTCAAAACCAAAG
GTCGAGATTGACGTTGAAAATCTAATAATTTCTTCTCCATCTTACTGGCA
AGATCGTATATCGGTATGTTAGGTGCGTCTTTGTAGAGAAATGCTTTTCT
GCGAGCATCTAACAAAGATACTTTTAATCTTTTTGCGATGAAACGATATG
TACCAAGGAACTTCATTCTCTCATGGATAGCCAACGTGAAAGGTACACTC
ATTTTCTGATTCTTTGCTTTTTGTTCTTCAGTAGCGTAAGTGACCATTGG
ATAACCAGCCAATACTTGCATCATTTTCTCCAATTTGGCAGGATTTAGGA
CGTACAACACTCGCAATTTGATTGCCGTAAAAATTAGCCATGGTAGTGTG
ATGAGATATGTTTTGAGCACACGTAACCATTCTTGTGGGTCGTTGAAAGT
CTGCACCATTTTGCTTTTAAAAGCTGTTAATCTCTTACTCCGTCATTTTT
CTTTGCTGCCAAACGTGTTGCCTTAATAAGTACTTCAAATGTTTTTCTCT
TTAATCACTTTTTTACGCAGCACAAAACTTAATTTGCTGCAAATTACGAG
TGTAATTATTGCTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033778XLOC_033778Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053508-exon-scaffold_232-1575043694:53401..53608TCONS_00053508-exon-scaffold_232-1575043694:53401..53608Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:52630..52727TCONS_00053508-exon-scaffold_232-1575043694:52630..52727Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:52350..52416TCONS_00053508-exon-scaffold_232-1575043694:52350..52416Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:52093..52192TCONS_00053508-exon-scaffold_232-1575043694:52093..52192Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:51697..51813TCONS_00053508-exon-scaffold_232-1575043694:51697..51813Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:49997..50155TCONS_00053508-exon-scaffold_232-1575043694:49997..50155Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:48735..48810TCONS_00053508-exon-scaffold_232-1575043694:48735..48810Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:48258..48400TCONS_00053508-exon-scaffold_232-1575043694:48258..48400Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1575043694:44293..45927TCONS_00053508-exon-scaffold_232-1575043694:44293..45927Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:53401..53608TCONS_00053508-exon-scaffold_232-1510915933:53401..53608Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:52630..52727TCONS_00053508-exon-scaffold_232-1510915933:52630..52727Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:52350..52416TCONS_00053508-exon-scaffold_232-1510915933:52350..52416Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:52093..52192TCONS_00053508-exon-scaffold_232-1510915933:52093..52192Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:51697..51813TCONS_00053508-exon-scaffold_232-1510915933:51697..51813Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:49997..50155TCONS_00053508-exon-scaffold_232-1510915933:49997..50155Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:48735..48810TCONS_00053508-exon-scaffold_232-1510915933:48735..48810Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:48258..48400TCONS_00053508-exon-scaffold_232-1510915933:48258..48400Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1510915933:44293..45927TCONS_00053508-exon-scaffold_232-1510915933:44293..45927Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:53401..53608TCONS_00053508-exon-scaffold_232-1491911889:53401..53608Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:52630..52727TCONS_00053508-exon-scaffold_232-1491911889:52630..52727Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:52350..52416TCONS_00053508-exon-scaffold_232-1491911889:52350..52416Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:52093..52192TCONS_00053508-exon-scaffold_232-1491911889:52093..52192Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:51697..51813TCONS_00053508-exon-scaffold_232-1491911889:51697..51813Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:49997..50155TCONS_00053508-exon-scaffold_232-1491911889:49997..50155Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:48735..48810TCONS_00053508-exon-scaffold_232-1491911889:48735..48810Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:48258..48400TCONS_00053508-exon-scaffold_232-1491911889:48258..48400Clytia hemisphaericaexon
TCONS_00053508-exon-scaffold_232-1491911889:44293..45927TCONS_00053508-exon-scaffold_232-1491911889:44293..45927Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_232supercontigscaffold_232:44293..53608 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.4905	16.1386	34.4329	34.8331	5.62542	4.73213	5.59421	6.38296	5.60669	4.41703	5.81397	6.63932	6.75774	6.34233	9.49087	10.6696	10.3339	8.96749	3.95928	3.46802	7.86846	8.0194	9.77037	7.88475	4.79607	4.53717	3.09184	2.65131	4.60891	4.96706
Blast
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BLAST of TCONS_00053508 vs. Swiss-Prot (Human)
Match: WDR82 (WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1)

HSP 1 Score: 437.187 bits (1123), Expect = 8.643e-146
Identity = 199/316 (62.97%), Postives = 263/316 (83.23%), Query Frame = 3 
Query:   48 MRLTDNVIRAFKPAKIFRDNTDRINHIDYTSNGETLITSSDDDSVTLYDCFDGKQKKTSNSKKYGVSLIQFTHASNTVIHTSTKVDDTIRYLSLHDNKYLRYFSGHTKTVVSLHMSPVDDSFISGSLDRTIRLWDLRSNNCQGLMHVSSRPVTSFDPEGLIFAAGVDAEIIRLYDLRTFDKGPFATFNLPQADNGVELSGIKFSNDGKKILVSTTSGLVYLLDAFQGNLLHTFMGLSTPGSGAVFLEVSFSPDSQYVLSGSSNGKIYVWSSDSGKRITVLDGMHPGSTQCVAFNPKYMMFASSCSNLAFWIPDLNE 995
            M+LTD+V+R+F+ AK+FR+N+D+IN  D++ NGET+I+SSDDDS+ LYDC +GK K+T  SKKYGV LI++THA+NTV+++S K+DDTIRYLSLHDNKY+RYF GH+K VV+L MSPVDD+FISGSLD+TIRLWDLRS NCQGLMH+  +PV SFDPEGLIFAAGV++E+++LYDLR+FDKGPFATF + Q D   E +G+KFSNDGK IL+ST    + L+DAF+G ++HTF G +   S AV LE SF+PDSQ+++ GS +GKI+VW+ +SG ++ VLDG H G   C+ FNPK+M FAS+CSN+AFW+P +++
Sbjct:    1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKM-QYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYAN--SKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 313
The following BLAST results are available for this feature:
BLAST of TCONS_00053508 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR828.643e-14662.97WD repeat-containing protein 82 OS=Homo sapiens GN... [more]
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