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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053496 ID=TCONS_00053496|Name=TCONS_00053496|organism=Clytia hemisphaerica|type=transcript|length=1178bp
tcgtttcgaaataatcaatgataccaataataccaatgcaccaacactta
acattttccaacttttaattgcactgttcaaaaaagataacataaccccc
atttttagtaataagttggagatttgatatttcacagaataATATGGGAG
GAGGGTGGACATTTCCCATTCAACATAACATGAACCATATCATTCCTACT
CTACGGGGTCTCAGTGACCCCAGAATAGTGTCACTTAACGTGCCAAGGCT
AGGATAGAAATTGTCTGTTGTCTATGGTGATGGTTGATTGGAAGGGAGGG
TGGAAACCATGGCAGCAACTGTTGTTTTCTCGTGGGAAAGTTcttcgttt
ttgttttcaaaacagTTCATATTGTTGTGTTGCTCGgtattatttttgaa
tattgCTTGGCGGTATCTGATTGGTAGATTCTTTTCAACCAATCGTTGTG
ACTGCACAGAGAATGTTCCGCGGGAAAGTTATTCATTTTTACTGAAAAAC
ATATCATTGTTGTTGTGTTGTTCGGCATTACTTGTAATGGGTACTTGGTG
GTATTTGATTGGTAGATTCCTTTCAACCAATCGTTGTGGCTGTATGGAGA
GTATAGTTCCTTTTAGcagtaatattttttcattgtttcttgGATACCCG
TGAAGATGGATCGAAGTTTTACACTAATTTTAATTCCAATTAACGGGCGT
TGGAACGTCGTGTGGTCATGTACCACATGTAACTTGACGAATATAGCCAT
ATGTCCTGGCTGCTTAACTACCAAGGAATTTGAAGATCGGAATGGGTCCG
TCTTGGCCACCAGGTGTTGTGGCCGAGTTTGGCGTGGCTGCGAAGACATC
GTCTGCTGCTATTGTATTCCAGTAAGTGGTTTCTTTTCTTCTCTCTTCTT
TCAGGGTTTTCGTCCATCGTCGGTCCTTCTGGGTTGGTTTAAGGTTTAGT
CTTCGTCTTGGTATTTCTGTTTCCCAGCCTGGCATCCAACTCCATTTCCA
CACTATTTCAATTACTTTCACGGCCCTCCTCCTTTTTACCTATATTAATA
GACTTCCCTCCCCCCTCTAGGTGAGATCTAGTCGAGGCTGATAGAAAAAG
TACGTGTCTCATGGCTATCGCTTGCCTATAAATTTCCAGTCCGGCTTTAT
TCTATTTCTATAGAAcctcttttttttt Run BLAST on NCBI transcript from alignment at scaffold_231:359087..360264 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053496 ID=TCONS_00053496|Name=TCONS_00053496|organism=Clytia hemisphaerica|type=transcript|length=1178bp|location=Sequence derived from alignment at scaffold_231:359087..360264 (Clytia hemisphaerica)
aaaaaaaaagaggTTCTATAGAAATAGAATAAAGCCGGACTGGAAATTTA
TAGGCAAGCGATAGCCATGAGACACGTACTTTTTCTATCAGCCTCGACTA
GATCTCACCTAGAGGGGGGAGGGAAGTCTATTAATATAGGTAAAAAGGAG
GAGGGCCGTGAAAGTAATTGAAATAGTGTGGAAATGGAGTTGGATGCCAG
GCTGGGAAACAGAAATACCAAGACGAAGACTAAACCTTAAACCAACCCAG
AAGGACCGACGATGGACGAAAACCCTGAAAGAAGAGAGAAGAAAAGAAAC
CACTTACTGGAATACAATAGCAGCAGACGATGTCTTCGCAGCCACGCCAA
ACTCGGCCACAACACCTGGTGGCCAAGACGGACCCATTCCGATCTTCAAA
TTCCTTGGTAGTTAAGCAGCCAGGACATATGGCTATATTCGTCAAGTTAC
ATGTGGTACATGACCACACGACGTTCCAACGCCCGTTAATTGGAATTAAA
ATTAGTGTAAAACTTCGATCCATCTTCACGGGTATCcaagaaacaatgaa
aaaatattactgCTAAAAGGAACTATACTCTCCATACAGCCACAACGATT
GGTTGAAAGGAATCTACCAATCAAATACCACCAAGTACCCATTACAAGTA
ATGCCGAACAACACAACAACAATGATATGTTTTTCAGTAAAAATGAATAA
CTTTCCCGCGGAACATTCTCTGTGCAGTCACAACGATTGGTTGAAAAGAA
TCTACCAATCAGATACCGCCAAGcaatattcaaaaataatacCGAGCAAC
ACAACAATATGAActgttttgaaaacaaaaacgaagAACTTTCCCACGAG
AAAACAACAGTTGCTGCCATGGTTTCCACCCTCCCTTCCAATCAACCATC
ACCATAGACAACAGACAATTTCTATCCTAGCCTTGGCACGTTAAGTGACA
CTATTCTGGGGTCACTGAGACCCCGTAGAGTAGGAATGATATGGTTCATG
TTATGTTGAATGGGAAATGTCCACCCTCCTCCCATATtattctgtgaaat
atcaaatctccaacttattactaaaaatgggggttatgttatcttttttg
aacagtgcaattaaaagttggaaaatgttaagtgttggtgcattggtatt
attggtatcattgattatttcgaaacga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053496-exon-scaffold_231-1491911889:359087..360264 | TCONS_00053496-exon-scaffold_231-1491911889:359087..360264 | Clytia hemisphaerica | exon |
| TCONS_00053496-exon-scaffold_231-1510915933:359087..360264 | TCONS_00053496-exon-scaffold_231-1510915933:359087..360264 | Clytia hemisphaerica | exon |
| TCONS_00053496-exon-scaffold_231-1575043694:359087..360264 | TCONS_00053496-exon-scaffold_231-1575043694:359087..360264 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_231 | supercontig | scaffold_231:359087..360264 . |
Blast
The following BLAST results are available for this feature:
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