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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053492 ID=TCONS_00053492|Name=TCONS_00053492|organism=Clytia hemisphaerica|type=transcript|length=924bp
GTGAAAGTTTCGTAAAATGGAAACTAGttgaaatttttacatttttccca
GTGATTGTGTTTAGTTGAAAACATGACCTTTCAGGTCCATCGTATATATT
GTATATAAAATATACTAGCCTAAGTCCATCAATCTCCGTGATAATAGTGT
TTCTTTTGAAGATCGTTCGTCTTTTGGGGTTGTTCGTAGTATTGCTTCAA
TTGAAAATGGCCATTGATTTGAATTGCTGGCTTTTCGTCTGGTTGCAATA
GGTTCGAATGTACGTGGTGGAATGTGGATAGATCAtgaaaggaaaataat
tttttatgtttaagtacACTTAGTTTGATGAGTGAATGCAGCGAGGATGT
TTGTAATTCAAACGCCCTATTTAAAACGTTTTCACAGCGCATGCTTCTCA
TTATGACGTAATGATACGCATGCAGAAGTAATTAGCGTGCGAAAATGCAC
GAGAATCTacttttccagcttttttcaaTCGCTGGAAACTTCGCGATCAC
cgtattttttcttcaatagagACTTAGCATGAGAATAACCATCACTTACG
TACAGACAACACTGGATTAAGTCATTAGCCTCTCCCTTAGCAAAATTCAT
TAAGCGAGCTAGACGTCCTTCACTGTCAGAGANGAATTAAGTCATTAGCC
TCTCCCTCAGTAAAATTCATTAAGCGAGCTAGACGTCCTTCACTGTCAGA
GATCCTCTTTTCAACTAGTTCTTCAAAATTTGTTATGAATGATCTATATT
CCAATGGATCACAAGTTTAACCGCAGAAGCACCTTGCATTTTAACAAGAT
AAAAAAGATAGCATTCGAAATATCAGCAGTATCAACGGTCGTTTGAAACT
CTTCTCGCACTTCGTGTTCTAGGTTTAGAACGTGGAGCTGGCAAAAAATT
GACACTACCATAGCTAGATACAGA Run BLAST on NCBI transcript from alignment at scaffold_231:347242..348165 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053492 ID=TCONS_00053492|Name=TCONS_00053492|organism=Clytia hemisphaerica|type=transcript|length=924bp|location=Sequence derived from alignment at scaffold_231:347242..348165 (Clytia hemisphaerica)
TCTGTATCTAGCTATGGTAGTGTCAATTTTTTGCCAGCTCCACGTTCTAA
ACCTAGAACACGAAGTGCGAGAAGAGTTTCAAACGACCGTTGATACTGCT
GATATTTCGAATGCTATCTTTTTTATCTTGTTAAAATGCAAGGTGCTTCT
GCGGTTAAACTTGTGATCCATTGGAATATAGATCATTCATAACAAATTTT
GAAGAACTAGTTGAAAAGAGGATCTCTGACAGTGAAGGACGTCTAGCTCG
CTTAATGAATTTTACTGAGGGAGAGGCTAATGACTTAATTCNTCTCTGAC
AGTGAAGGACGTCTAGCTCGCTTAATGAATTTTGCTAAGGGAGAGGCTAA
TGACTTAATCCAGTGTTGTCTGTACGTAAGTGATGGTTATTCTCATGCTA
AGTctctattgaagaaaaaatacgGTGATCGCGAAGTTTCCAGCGAttga
aaaaagctggaaaagtAGATTCTCGTGCATTTTCGCACGCTAATTACTTC
TGCATGCGTATCATTACGTCATAATGAGAAGCATGCGCTGTGAAAACGTT
TTAAATAGGGCGTTTGAATTACAAACATCCTCGCTGCATTCACTCATCAA
ACTAAGTgtacttaaacataaaaaattattttcctttcaTGATCTATCCA
CATTCCACCACGTACATTCGAACCTATTGCAACCAGACGAAAAGCCAGCA
ATTCAAATCAATGGCCATTTTCAATTGAAGCAATACTACGAACAACCCCA
AAAGACGAACGATCTTCAAAAGAAACACTATTATCACGGAGATTGATGGA
CTTAGGCTAGTATATTTTATATACAATATATACGATGGACCTGAAAGGTC
ATGTTTTCAACTAAACACAATCACtgggaaaaatgtaaaaatttcaaCTA
GTTTCCATTTTACGAAACTTTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053492-exon-scaffold_231-1491911889:347242..348165 | TCONS_00053492-exon-scaffold_231-1491911889:347242..348165 | Clytia hemisphaerica | exon |
| TCONS_00053492-exon-scaffold_231-1510915933:347242..348165 | TCONS_00053492-exon-scaffold_231-1510915933:347242..348165 | Clytia hemisphaerica | exon |
| TCONS_00053492-exon-scaffold_231-1575043694:347242..348165 | TCONS_00053492-exon-scaffold_231-1575043694:347242..348165 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_231 | supercontig | scaffold_231:347242..348165 . |
Blast
The following BLAST results are available for this feature:
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