TCONS_00053467 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053467
Unique NameTCONS_00053467
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4094

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053467 ID=TCONS_00053467|Name=TCONS_00053467|organism=Clytia hemisphaerica|type=transcript|length=4094bp
tcccacttaggttcccccatcccacttttcaggtgttcatttaggttccc
actttaggttcccaggttcccccatcccacttatccggtatgccacATAA
TACATGCATTTTTCTATCCTTGACAATCAATTTACGCATGgcttaaaaaa
atactaaaacaaaaaacaaaaaaaagaaaaaaagggagAAAGACAATTTA
CttattgtttaaaagaaaaagattgagctttctgattggttcaatcATTA
CTGACCAATGTGTAAAAGCCGTTACCAGTCTATTTTGATGGTAGGGAATT
ATAAAGACCATATGAATAATATCAAAAGGATAATGAATTTACAGACCAAG
CTTTGTCGTCTTTATCTTGGgaaattatttttaagaaaatagaaGAGGAC
TTACTTCTTTACATCAATCAGTATATGCTTAtccttttgagaaaaaaagt
ttaacagAAGAAACGAGGGAGTCAGATATTGTCTTGGTGCTCGTAGTAAG
GagaagaagagaaaaagaaaaagagggaAGAAAACTCGAGtaTAAAAAGG
AAAGACCAATGGCCACTGATGCTGTGGTGCATCCTTTCCAACCAAATTAC
GGAGTTGACAAGAACAGATTTTCACCCGACATTAAAAGATTCAGTATGGT
GGACGAATATGAGCTGGAGAAAGATTTCAATCGAAGCAGTAAGAAGACCA
GATCTGATCAAGAAGAcaaaagtaaagaaaacgaaagtgaacaTCTTTTA
AACAATTTGAATCAATCAATAAATGGAGGATTGGATGGGAAAATGAAGAA
ACACAGAGCAGCCAGGAAACGAAATCGTTCTGACATGTCACCCGAAGAGT
TAAGAAAACTGAGAGAAAGAGAACGCAAGGCGCAACAAAGTCGCCGTGAT
CGAATCCGAGCTCAAAAGcGTGAAAACCAACAATGGCAAGATGAGGACGC
AGCCTGGGAAGCTTTTCTTGATCAAACCGATTGCAAAAAACCTTCTACCA
AACACAACCGATCATCAATGCCTTCAATGGTTTGCTCAATTGACGAAAAT
CAAGACACCAAAAAGTCTAAGGGGAAATTGGAAAAGCAGAACTCTTTGGA
ATCGACCACAGGTAGTAGCCACTCGACATCTTACCTTTCAGACGACAGTA
GTACCCATTCCTCCTACAAAGAAGCTcctaaaaagaacaacaaagagTCA
GAGGAAGAAATGACTAAGATACCTGAAGAAGAACCGCTGAGAAGACATCA
CGAAGAGAAATTACCACCTCCTTCCAAAGAGAAACTCTCACATCATGCTA
GAGATGAGAAACCTCTACATCGTAATGGAGAAGAGAAGAAAGAACACCGC
CACCATTACCACCATCACCTCCCTTCACCGCCATCACACCCTTACCATCA
TATGTACCACCAGAAACTCTCCCCTCACTCCTTCCATCCAAGTGATCTAT
ACCCTAAGATGTTTCATCACGACTCGCCCATACACCACCACCCACACCCG
CCACCGCCTTACTCACCCACAGAACACAAACACTTCTTAGCTATACAACA
ACACCACCATGACAAGAAACACGACCCACATCACCACGACCCACATCACC
ACCACTATCAACCGTCACACTTCATGTCGACCGTCAGAAGTCCACAGAAC
TCACCCTCCTCCAACCACCGCgaaaataagaaacataatACTTCACCACA
ACACGAGAAAAAGAAAGTGATCAGTCGAAATGTTGATCGCAAGAAACTCT
CTGAAGAAGAATTGGAAGAATTGAGGAGAAGAGAACGGGACTATCAGAGG
GAAAGAAGAGCTAGAATTCGAATGGAAAAGgccAAAACACAAGCACAGCA
AGAGAGGTTCAACGCTTGCGGTAGATACCCACCACCGCCACCTCCACCAC
ACGCTGAAATGTACAGACACCATATCCATCATCATCCACAAGCCACTGAT
ACCATCGCCAGATATGACCACGAACATTACCGAGTATCTCCAGCACCTAA
ACCAACACCTAAAGCATTGGAAGTGGAAATCCCAGAATGTGAGAAAGTTA
ATAAAACACCAAAGGTGGAGACAGATTTGTTGCAAGTTGTACCAAAGACC
CGTGATTGTGAGGATAAACATACCCCTCCTACTGGCACCTCATCTCCGGT
CGAAGAATATCCAACGACTAAAGCTCCAAAGAAATCTCTACTGGAAAGCA
TTTGTTCCACTCTCAAGAAAGAGTCTTCAGAATGGGATAAAGAAGAGCTT
GGGGACCTCATCATCGACCTCAAACGAGACGACGACAAACGACAAACAAC
GCCGAAAATGGAGCCAGTTGAAGAAAGGGTTGATGACGTTCATTATTTAA
CCAAGATTAAAGATGAATACCATTCTAAAGAATACGATGATAGCACACTA
TCTCAAGCTGAAGAGCAGAAGTTACGTGATAAGCTTACCGAAGAGCAATT
AGAGCGAAGACGCAAATCGAACCGTGAGGCGCAACGACGCCGACGAGCAC
GACTCAAGATGCAAGGTCATTTAGAAGAACGTCACGAATTCGAACTTCAT
GATGAACTCGTAGATAAAGAAGATCGGATTGAATACAAACATTGTAAAAA
CAGGCCAGATTCTCTTTACATGTCTCCATATGAAGGATTTACAGGCCACA
GAGGCTCTCCATACCACAAAGAGCGCAACCACCACGAAGGCGTGCACTAC
ATCCATGAAAATTACTCTTCTCCACAACGCGTGATCATGGATACTCACTA
TCACCATGGGAACAAACATTCCGCTTTTTACCATTCACCGCATCATCGAA
TCTCAGAGATGGACGATTCTCAAAGACACCGTCCTCACTTTTACTACGAT
TCACCAGAATTTCGACACCATCTTCCGCATCGATACCGCGATACGCACCA
CAGGAGACACGAAACAGTTGGTGAGCGTGAACGTGAATACACACGGTCCA
GATCACCTCACGCACATTCGCACAGTCGAAGTACTAGTAAATCTGCAACA
CCACCAGACTCGAGGAAAGCTCCTTCGCCCACACCATCAGATCCTCAACA
TCATTCGCATCAACATAATTCATCATCATCACGtcgtgaaagtgaaagta
aagacGACTCAATCTCAACTTCCAACGAAATCAACGATTCAACCGCATCC
AAATCGAGTGGACGAAAACGAAAACAATTCGCGCCACGGAAATTGGCTGC
GACGTCAGTTAATACGACACCAGACGAGGAAGTACCAGTTGACGAGTCAC
AACCTACGGCAGCCGAGAATCCATTACCGGCAACCGAATATGGTGACCAT
CCGTTTGAGGAGGAGGAAAACAAAGTTGTTATTTTACCGAACGGAAATGA
AGAAGAGGACTTAGaagaaaattcgtaaaaatacctccttttattacttt
tacgattttagttttaatttttcataaattttacttTATTGTCTTCTGTT
ATTACAcgaaaaatttttataaaattttattagaaTATGCACGCAACATT
TTTTGGGGATTCTTTCTGTTACAATAGTATTTTTTCTTCGACTTTTATTT
TCCAATATCCGCTCAATTTTTCCTAATTCTACTTCAGAATATACCTTGTA
ATTATTACGTTAAATATGTGTTTTTAGCATTCCTTTATGTCTTGTCATTA
GACGAGAgtttttagattatttttattttctgtgTTTGgtactttttaat
gaaaagtaTACCTAGATTCGATACAGATCGCCCATTTTGTCAACTCCTtc
ttagaatagtattctttgaGTAGACTTCATTTTAATCAATTATAGGGGCA
GAGATGTCACTCGGGAACTTTTAAAGGTGTTTCTCATAAGGTTTACAAGG
GTAGAAATAATTTTGGAATGtttaatttttgacgttctaaGTCACGTGAT
TACCCCTTCAACTTGGTCTCAAAAATGATATTAAAAACAGGGTTGgtctt
tttttataatgagATTATATATTATGAATTTTGagagatttaaaagaaaa
ggttgtacagaaaaaaatcttatatagaATTATAATGAAAATTTATAGAT
AGAGAAAAGACTTTTTATTGCTGTAATTATAAATATTTGTTGAC
Run BLAST on NCBI

transcript from alignment at scaffold_231:258178..266540-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053467 ID=TCONS_00053467|Name=TCONS_00053467|organism=Clytia hemisphaerica|type=transcript|length=8363bp|location=Sequence derived from alignment at scaffold_231:258178..266540- (Clytia hemisphaerica)
TCCCACTTAGGTTCCCCCATCCCACTTTTCAGGTGTTCATTTAGGTTCCC ACTTTAGGTTCCCAGGTTCCCCCATCCCACTTATCCGGTATGCCACATAA TACATGCATTTTTCTATCCTTGACAATCAATTTACGCATGGCTTAAAAAA ATACTAAAACAAAAAACAAAAAAAAGAAAAAAAGGGAGAAAGACAATTTA CTTATTGTTTAAAAGAAAAAGATTGAGCTTTCTGATTGGTTCAATCATTA CTGACCAATGTGTAAAAGCCGTTACCAGTCTATTTTGATGGTAGGGAATT ATAAAGACCATATGAATAATATCAAAAGGATAATGAATTTACAGACCAAG CTTTGTCGTCTTTATCTTGGGAAATTATTTTTAAGAAAATAGAAGAGGAC TTACTTCTTTACATCAATCAGTATATGCTTATCCTTTTGAGAAAAAAAGT TTAACAGAAGAAACGAGGGAGTCAGGTGAGCTCTACTTTCTTTTTCGAAA CATTTTTTATTAAAAGATATAATTCCTCTTATTTTAAAATGTCATAGAAA TCAAAACATTAAACAGACTCGGTGCTTTTTTTATTCCGGTCTGGGTTTTA CAATTCGCGTTTTTTTCTTTTTCATTTTGTTTTCTTTATTATTTCTATTC TTGAATTGACGTAAAGGTTGACACATTGACCATGTCATTATTAAACTTTA GATATTGTCTTGGTGCTCGTAGTAAGGAGAAGAAGAGAAAAAGAAAAAGA GGGAAGAAAACTCGAGGTAAAATCCGTAAGTAAAAAACTTTTTTTATGTG TGTGTACAAAAACCTCAAGCCGTGTTTGTAAAAAATATTGTAAGTTGTAA GGAAAAGGGAAAGTTTTAAACTAAATGTTCATTTGACTTGTCCCAAGAAA CCTCGTGGGATTTTTCTTGTCCCAAAGTTTGCTTACTTTTTTGGGATGGC ATAATGGATCGAAAATGCTTCTTTATTGAAGAATGAACGACTTGAATCAA AAAGACAGATTTGTTTTGTTTTGATAGCTGCATCGTAGCTGCGTCTTGAC ATTGAACTTTTCATTTTGTTATGACTTTTTTTCTTGATGAAAACGTTTGA TTGTCCTACAGCTGTTTGTATTTGTATGTGATGTGAGATGTTCGTCCGTT CCAAATGTTTCCTGGTGTGAAAAAAGATTTGATATAATTCTGTCAATCAT CAGCCGCAGTGTCTTTTCTGCATGATGCTCGAAACCGTTTGTTTACTGAA CTTCCAACCATTTGATACACTGAAGATCAGTCATGTGGAACATTTTGATT CTTGACGCTCTCATAAACTTTTTCTCTCTTTATTTTTGTATTCTCTCTGA TCTTTTTTATCTTTTTTATCTATTGTGTCTTTTTTGTGTGTTGGTATAAA ATGTTTTGTTTTGAAGAGTGTGTAAAGCCTTGTGTCCACTCCGGATAATT TTCAACGGATCGGTTTGGACCAGAATATTTTGGAAAACCGATCCGGACAG TTTTGCAATATCCACTTCAAATTTTCTGAACCAGATTCTTTCTGTTTACA ATATTTACACAAAGAAAATTTAATTAGTTTTTAATTAGTTTAACCTTCTA CAGATGTTTTATTGTTTGAAATCAATAGAACCGTTTCGATCCGGCACGGA TCGCAAAAAAAGTTGAAAAAATCCAACTTTTTTTCTATCCGTTTGGACCA AAAACACGTGAACATTCGAACCGTTCACGTGAAACAAATATGAAGCAAAT GAGTTGAAGATAATCCCCAGAACAATAGAAACCGTTCCGAACCGTACCGA ACCGTTGAAAATTATCCGGAGTGGACACATGGCTTAAGTGTGTGTGTGAG GGACGAGATTAAGTTCAGATCTATTTGAAATCGGGCAGCTTTTCATAAGG AGCTGATTCGAAGATTTTTCATAATCACTCTCTTTTTTGTGGAGCATTAG ATGTTCTTTTATTTCTCGAAATCTTCTTCGTTTTTATTGAATGGATTTCT TAGATACGATTTGTATTTATTTGTTTTATCAATTTACCTGGGACATCATT TTTTATTTGGATGCCATTTTATTTCAATTTCTGTCAGAGAAGTTATTAGT GACCTCGATTACATTGTAATTACGATTGGGTTTTAACCAAATTGTTTTTG TTTTGTTTTTCAGTATAAAAAGGAAAGACCAATGGCCACTGATGCTGTGG TGCATCCTTTCCAACCAAATTACGGAGTTGACAAGAACAGATTTTCACCC GACATTAAAAGATTCAGTATGGTGGACGAATATGAGCTGGAGAAAGATTT CAATCGAAGCAGTAAGAAGACCAGATCTGATCAAGAAGACAAAAGTAAAG AAAACGAAAGTGAACATCTTTTAAACAATTTGAATCAATCAATAAATGGA GGATTGGATGGGAAAATGAAGAAACACAGAGCAGCCAGGAAACGAAATCG TTCTGACATGTCACCCGAAGAGTTAAGAAAACTGAGAGAAAGAGAACGCA AGGCGCAACAAAGTCGCCGTGATCGAATCCGAGCTCAAAAGGTGAGAGAA GATTTTTTGTTTTATGACAATTTACAGGACTGTGTGTGAGATAGAGGGAC AAAAATCATTTCATTTCACCCTTGTTTCTTTTGACATGCACTGATATTTT CTTTTTTTAAGTTCTTTCAATTCTTTTTCTTTTTTCTTTATCCGTGTCTT ACTTTTTTGATAGTTTTGTCAATCTTTTCCCTTCATTTTTCTATGCGAGA CCATCTCTATTTGCCGGCTCATACAAAAGATTTATTCAGCAAAATAAATG AAAATATTAATAAGGAAAGAAAAGGAAAAAGATTCTTTAAAAAAGCATAA CAACCTCTGTTGCATTTTCTTCCATAGGGTTTTATCTATTTTATTCATTT ATCAACAATTCTTTTATGATTGTAGGAAAAGTGCTTACAATGGTGTGTCT TTAGGTCCTTTTCTTTATTTTGATAATATATTATATCTATTTTGTTACCC CTGAGCAAGTGAAGGAAAAAGAGGGGAAAAAAGGAAAACGCATATGCCAT TAATTGATGATGGTGGTCCACAATGCAAAGTGATTGTATTGTTGTAAGAC TCAACAAACTAAACACTTTGTCTTTTTTTGTTGCTCTAAAACCTTTTCTA GAGGCAGGTGACAAGATCTTGTAATGTTTCTCATTATCCCCCCTCCTACA TTAATATTTTTTTGAAATGAAGATTGACAAAAAAAGTAAGAAAAAATTGA AAATACATTTTATACAAAATGCTGGTATATGTGATGTGATGGACATCTGT TTTTATAGTCCTTGTTTTGTCTTTTCTCATCTTTTCTTGGGCTACTCAAT ATTGATCATTTTCTCTCTTTCTTCTTGATGATAAAATGACACTTTATTTA CATCTCAAAAAGAAAATGTATCTAAGTTGCTGAAAAGAAAGTTTTTCATT TTTCACACACAAAAAGAAGGATGAGACTTTTTCTCTTGTCATATCTTACT ACCACCCGTCACGATGATTGAAATATATAAGAAATTAAAACCAAAACATT TTTTCGAACGATTCTTTTTTCCTGTGAACTTAATTTCCTTTCTTACTTAT AATATGAATATCAGTTTTATTTTCTTTTGCTTTATTATTATTACTTATCT TTCTTTTTTCATTCCATTATTCATTTTTCATGACTTTTAATATCATTATC TATTCGCAAAAAAATCATCGACACACTATGTAATATTTTTCAGATTTTCA ATTCTTTTATGTCGTCTCTTTCATTCGTTTTCATTTATTTTCACTTTTTC ACAAGATTGGTCAAATTTATGTAAGGGGGTGCTTGATATTGACATTGGAA AAATACTTGTGTCAAAAAGAATCATATTTTCTTCATTTGTGATGTGTCAA AACCATACATCATTAAAAAGGTGTTATTCGGACGTCTTGAAAAACATCAG TTTTGATTGTGTAAACATCACTGCTCAATCAAACCATTTTCAATCATCTC GACAAACTTTTTTTTTCGAAAATCATCATGATGATCATATATATTGAAAA CGGAAAATCTTGTGTCATCTTGTTTTTCATTTTCCCTTGTATAAACCTCT TCAAAATCTTTTCTTTTGTTAGTCAAACATGTTTACTTTAAATCAGCACT TATCAATACATCTCCATCTTTCAGAAACATAACACACAAAACAATCAACC TCAAACTGATATTTCAAAACCTATACCTTTTCTTTTCTTCAATTTATGAT TTGAAAAAAAAAAGATCTTTACTAAAAAAGTTGGAACTCATCTGGTCACT TTTTCTGACCTCATTTTTTGATAATACCTTACTAATTTACAAAAGAGACC AAACTTTTTATCTTTTCAAAACGGTAGCTGTTGTCAAATCTATAGATTCA TTAAGCAAAAGACTTCTGACTTACACGCCAACCTCTTTTTTTAAGTCGTT TCGAAAATCATATGGAACATTAAAAAAGAATGGAAGAAATTCTTTATATT GTAAAGCAAGTTTTGCAATGATTTCTTGTTCTTCTTTTTCAGCGTGAAAA CCAACAATGGCAAGATGAGGACGCAGCCTGGGAAGCTTTTCTTGATCAAA CCGATTGCAAAAAACCTTCTACCAAACACAACCGATCATCAATGCCTTCA ATGGTTTGCTCAATTGACGTGAGTACTTAACACAGCTGGATAGAAATGAA GTGCTTGAAATGAATCCATTTTAAAGCATTATGTCTTCATTACGTACTTT GAAAAATGTGTTGATTCCCAGTACTTCTTTATATTAGTGAGTCAAATAGG GTTACATTTTCATGCACGATATCTAGTTTTATTTCCTTCTTCACTGACAC ATATGGATGACATCTTTAAAATGAGCTTGCCATCATAAAATGAGATCAAT TATTTATCAGTTATTTATTTTCTTATTTACAGGAAAATCAAGACACCAAA AAGTCTAAGGGGAAATTGGAAAAGCAGAACTCTTTGGAATCGACCACAGG TAGTAGCCACTCGACATCTTACCTTTCAGACGACAGTAGTACCCATTCCT CCTACAAAGAAGCTCCTAAAAAGAACAACAAAGAGTCAGAGGAAGAAATG ACTAAGATACCTGAAGAAGAACCGCTGAGAAGACATCACGAAGAGAAATT ACCACCTCCTTCCAAAGAGAAACTCTCACATCATGCTAGAGATGAGAAAC CTCTACATCGTAATGGAGAAGAGAAGAAAGAACACCGCCACCATTACCAC CATCACCTCCCTTCACCGCCATCACACCCTTACCATCATATGTACCACCA GAAACTCTCCCCTCACTCCTTCCATCCAAGTGATCTATACCCTAAGATGT TTCATCACGACTCGCCCATACACCACCACCCACACCCGCCACCGCCTTAC TCACCCACAGAACACAAACACTTCTTAGCTATACAACAACACCACCATGA CAAGAAACACGACCCACATCACCACGACCCACATCACCACCACTATCAAC CGTCACACTTCATGTCGACCGTCAGAAGTCCACAGAACTCACCCTCCTCC AACCACCGCGAAAATAAGAAACATAATACTTCACCACAACACGAGAAAAA GAAAGTGATCAGTCGAAATGTTGATCGCAAGAAACTCTCTGAAGAAGAAT TGGAAGAATTGAGGAGAAGAGAACGGGACTATCAGAGGGAAAGAAGAGCT AGAATTCGAATGGAAAAGGTAATTATCTCTAACATACACAAGTATTACTG TGCTATTCTTTTTAAAAGCGCCAACACAATCCGAATATTCCTTTAATTTG TCCGATTGCTCTTGAAAAGGTCATTTTGAAAAGCTTGTGCTTGCCCAAGA GAAAATTTAAGACAACGTAATATAATTTTTCTTGCAATTTCTTTTTAGGC CAAAACACAAGCACAGCAAGAGAGGTTCAACGCTTGCGGTAGATACCCAC CACCGCCACCTCCACCACACGCTGAAATGTACAGACACCATATCCATCAT CATCCACAAGCCACTGATACCATCGCCAGATATGACCACGAACATTACCG AGTATCTCCAGCACCTAAACCAACACCTAAAGCATTGGAAGTGGAAATCC CAGAATGTGAGAAAGTTAATAAAACACCAAAGGTGGAGACAGATTTGTTG CAAGTTGTACCAAAGACCCGTGATTGTGAGGATAAACATACCCCTCCTAC TGGCACCTCATCTCCGGTCGAAGAATATCCAACGACTAAAGCTCCAAAGA AATCTCTACTGGAAAGCATTTGTTCCACTCTCAAGAAAGAGTCTTCAGAA TGGGATAAAGAAGAGCTTGGGGACCTCATCATCGACCTCAAACGAGACGA CGACAAACGACAAACAACGCCGAAAATGGAGCCAGTTGAAGAAAGGGTTG ATGACGTTCATTATTTAACCAAGATTAAAGATGAATACCATTCTAAAGAA TACGATGATAGCACACTATCTCAAGCTGAAGAGCAGAAGTTACGTGATAA GCTTACCGAAGAGCAATTAGAGCGAAGACGCAAATCGAACCGTGAGGCGC AACGACGCCGACGAGCACGACTCAAGATGCAAGGTCATTTAGAAGAACGT CACGAATTCGAACTTCATGATGAACTCGTAGATAAAGAAGATCGGATTGA ATACAAACATTGTAAAAACAGGCCAGATTCTCTTTACATGTCTCCATATG AAGGATTTACAGGCCACAGAGGCTCTCCATACCACAAAGAGCGCAACCAC CACGAAGGCGTGCACTACATCCATGAAAATTACTCTTCTCCACAACGCGT GATCATGGATACTCACTATCACCATGGGAACAAACATTCCGCTTTTTACC ATTCACCGCATCATCGAATCTCAGAGATGGACGATTCTCAAAGACACCGT CCTCACTTTTACTACGATTCACCAGAATTTCGACACCATCTTCCGCATCG ATACCGCGATACGCACCACAGGAGACACGAAACAGTTGGTGAGCGTGAAC GTGAATACACACGGTCCAGATCACCTCACGCACATTCGCACAGTCGAAGT ACTAGTAAATCTGCAACACCACCAGACTCGAGGAAAGGTATTAAAAAACA TTTCTTAGTCTGAAATTTCCATTCTATTAGTATAAAGACTTCATTTCAAA AGATTACCATTCCAAATCAATCTCGTTTTATTGTCTTTTACCGTTTGCTA CAATTCTGACAGCTACCATAATATTTTCATGTCGAAAAAAAGTTATAGAC CCTGCATTCATTTCATTCTTTTCATTCTGTTCTTCCAGCTCCTTCGCCCA CACCATCAGATCCTCAACATCATTCGCATCAACATAATTCATCATCATCA CGTCGTGAAAGTGAAAGTAAAGACGACTCAATCTCAACTTCCAACGAAAT CAACGATTCAACCGCATCCAAATCGAGTGGACGAAAACGAAAACAATTCG CGCCACGGAAATTGGCTGCGACGTCAGTTAATACGACACCAGACGAGGAA GTACCAGTTGACGAGTCACAACCTACGGCAGCCGAGAATCCATTACCGGC AACCGAATATGGTGACCATCCGTTTGAGGAGGAGGAAAACAAAGTTGTTA TTTTACCGAACGGAAATGAAGAAGAGGACTTAGAAGAAAATTCGTAAAAA TACCTCCTTTTATTACTTTTACGATTTTAGTTTTAATTTTTCATAAATTT TACTTTATTGTCTTCTGTTATTACACGAAAAATTTTTATAAAATTTTATT AGAATATGCACGCAACATTTTTTGGGGATTCTTTCTGTTACAATAGTATT TTTTCTTCGACTTTTATTTTCCAATATCCGCTCAATTTTTCCTAATTCTA CTTCAGAATATACCTTGTAATTATTACGTTAAATATGTGTTTTTAGCATT CCTTTATGTCTTGTCATTAGACGAGAGTTTTTAGATTATTTTTATTTTCT GTGTTTGGTACTTTTTAATGAAAAGTATACCTAGATTCGATACAGATCGC CCATTTTGTCAACTCCTTCTTAGAATAGTATTCTTTGAGTAGACTTCATT TTAATCAATTATAGGGGCAGAGATGTCACTCGGGAACTTTTAAAGGTGTT TCTCATAAGGTTTACAAGGGTAGAAATAATTTTGGAATGTTTAATTTTTG ACGTTCTAAGTCACGTGATTACCCCTTCAACTTGGTCTCAAAAATGATAT TAAAAACAGGGTTGGTCTTTTTTTATAATGAGATTATATATTATGAATTT TGAGAGATTTAAAAGAAAAGGTTGTACAGAAAAAAATCTTATATAGAATT ATAATGAAAATTTATAGATAGAGAAAAGACTTTTTATTGCTGTAATTATA AATATTTGTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033753XLOC_033753Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053467-exon-scaffold_231-1575043694:266066..266540TCONS_00053467-exon-scaffold_231-1575043694:266066..266540Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1575043694:265775..265839TCONS_00053467-exon-scaffold_231-1575043694:265775..265839Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1575043694:264000..264377TCONS_00053467-exon-scaffold_231-1575043694:264000..264377Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1575043694:261873..261998TCONS_00053467-exon-scaffold_231-1575043694:261873..261998Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1575043694:260823..261608TCONS_00053467-exon-scaffold_231-1575043694:260823..261608Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1575043694:259454..260642TCONS_00053467-exon-scaffold_231-1575043694:259454..260642Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1575043694:258178..259252TCONS_00053467-exon-scaffold_231-1575043694:258178..259252Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1510915933:266066..266540TCONS_00053467-exon-scaffold_231-1510915933:266066..266540Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1510915933:265775..265839TCONS_00053467-exon-scaffold_231-1510915933:265775..265839Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1510915933:264000..264377TCONS_00053467-exon-scaffold_231-1510915933:264000..264377Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1510915933:261873..261998TCONS_00053467-exon-scaffold_231-1510915933:261873..261998Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1510915933:260823..261608TCONS_00053467-exon-scaffold_231-1510915933:260823..261608Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1510915933:259454..260642TCONS_00053467-exon-scaffold_231-1510915933:259454..260642Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1510915933:258178..259252TCONS_00053467-exon-scaffold_231-1510915933:258178..259252Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1491911889:266066..266540TCONS_00053467-exon-scaffold_231-1491911889:266066..266540Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1491911889:265775..265839TCONS_00053467-exon-scaffold_231-1491911889:265775..265839Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1491911889:264000..264377TCONS_00053467-exon-scaffold_231-1491911889:264000..264377Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1491911889:261873..261998TCONS_00053467-exon-scaffold_231-1491911889:261873..261998Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1491911889:260823..261608TCONS_00053467-exon-scaffold_231-1491911889:260823..261608Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1491911889:259454..260642TCONS_00053467-exon-scaffold_231-1491911889:259454..260642Clytia hemisphaericaexon
TCONS_00053467-exon-scaffold_231-1491911889:258178..259252TCONS_00053467-exon-scaffold_231-1491911889:258178..259252Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:258178..266540 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00097306 0.719876 0.201012 0.180081 1.07434 1.84769 1.39644 1.27062e-06 1.5829 1.6968 0.868952 2.19259 0.970085 1.37887 1.50605 2.56377 2.07679 2.12889 0 0.612468 1.19439 3.11694 0.429037 1.124 6.65203e-07 2.7771 0.377479 1.38861 0.00304608 0.000156609
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053467 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top