TCONS_00053341 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053341
Unique NameTCONS_00053341
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2195

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053341 ID=TCONS_00053341|Name=TCONS_00053341|organism=Clytia hemisphaerica|type=transcript|length=2195bp
ttagtGATACGTTTTTTAAACAAATCGCACAATGAAGAAACAATCATCTC
ATCAGCAACCATCAGTCAACAAAGTGACATCCATCTCTAAACCAAGATCA
TTGGATGTCCTCATGAAAGGCACTGCTGTATTGGATGTcaaatcaaaatg
tttttcatcAACAACCACGGCCACAACTTTAGCGAAACCAATGAAAACTt
tagaagaagatgaagaaaataaaattgaaaagATTGAGGAAGATTCATCG
CTAGAAGATCAACGTAAACCTGCTATTGCTTCAGTTGCAAATAccacaaa
aatattgaaattggaACGGAGAAGCAAGCCCAAGAAAAAGAAACAGTATA
ATGTcctcaaaaagaaagaaaagaaatcagACGACATGCTTAAAAGGGAA
AGTACGTTCAGTAGTGAGAGTATGTTTGATAATCAAGAATCAACTTCCTC
AGGACTTTCGCAAAGACTATCCACCCTCTCCACAACATCTGTAAAAAATC
GATTACAATCTTTTGAAAAGAATGATGAGGAATTTTACAAGATTATCAAT
CAGATCACCAAAGAAAATAGTGGTGTAGATCAAGTGGATGATCAAACTAC
TGAGGAGGAACTGGTCACATACAGAGAATCAGGACTTGATTGTCTACCAA
TGAATACATCTGAAAATACCAGCATTTCATCATCTACATCTAATACTCca
caaaaaaaatctaaaataaacaaaactttATCCAATCAATCAGAAAAAAT
TGATATTCTCAATACAGAAGAATCACGTATCTCAACACAAGCTTCAcagt
tttcttcaaaaatctcttCCCTTTCTTCACGTTTATCCAAAGTTTCTACT
CAGTCTTTGAGACCATCTAGAATCTCCCCAGGGATATCACAACAATCCTC
CCGGAGGAGCTCGCAGAGGTCTAAATTATCACCAGGAACTCCACAATACA
GCTCAAAGTTCAAGGTTCAAAGCTcaagatttttatcaaaagtctCAATT
AACCCATCTACAATGGAAAGTCATAGAGATTCTTTGCTATCCACCAGAGA
AGAAACTTCAAGACCAGGGCTTCAAGAACACCTCATTGTAGAATCGCCTG
AGAAATCTTTCCATCAACAATCATCCATCAGATTGCCTAAATCGCCAGGA
TCAAGCGAGAACCTGATTGATGACTCTCATCTtaataaagaaaaaGTTTC
AGAAGAAATCTTCTCAGTAATTGAAGAGGGTGAAGCTGAGGACGAGGAAG
AAAAAAGGGATAGATTTCCAAGTGAAGAAGAACTCAACATGCATGGGAGC
AAAATGATTTTGGCGGAAAAACAATCTAACACCTCGTATATAAATCAAGG
ATTGAGCAATAATAAAACAATATCACAATTACCATCAACTATACCATTTG
CAAAGGATACAGGCAGAAGCGTACATCATTTTTGTACGCAGTACTACACA
CAAAACAATGATATCCCTTGGACAAAGTATCTTCACACACCTTCCAAATA
TGAAGTTGTCAAGAGTAAACCGATCAACAAGATTTATGGCTCACCTGATA
ATATCCAGAAAGAACTCAACGGAGAAACTTTAGAATATATTTCAGATGAA
CAAAGTGAAGGTGAGCGGAGATTATCCTTGCTAGCGGAGCGCATCATGAG
TCAGATCGAAGAGGATCAGAAAGCAGGGGAGGAAGAACAAGATCAATCTT
TTCTGAAATTACAAGATGTCGTCAATGAGTTGTTCCATGAGAAAGAGCAA
CAAAATGGCGTGATGGTGGATTTTGAAGGTGAAATAATTGGTGATAAAAT
GAATGTTCatgaaaattcttcaaaTACAAAGCTCTTTCAAACACCAGCAC
CTCCAAAGTTTCGAGTACCTCCCCAAGAAGTGACCAAGGTATTAGCTCCC
GACTATGTTAGTTTTCAATTGACTGAAGAAAACCTTCTAGAGAATATGGA
TATCGATGAAGTGGCTCAAACGAACTTTTTCATTGAAGATCGACCTGAAG
ATGAGAAAGAATTTGTCAAAAGATTGATCAATCGAAGACATAATTCAGCA
ATCGAATTGCATCCTGAATTTGACATCATGAATCTAATTGGTGGAGAAGG
AATGAAAGATGACGACGCTGACCATGAAAACGAGGCTGGAGAAGAGTCTG
GGACGAGTAGTGAAGATGATGAAGAAGAGGAAAATTGTTCTTTAG
Run BLAST on NCBI

transcript from alignment at scaffold_228:662161..676284-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053341 ID=TCONS_00053341|Name=TCONS_00053341|organism=Clytia hemisphaerica|type=transcript|length=14124bp|location=Sequence derived from alignment at scaffold_228:662161..676284- (Clytia hemisphaerica)
TTAGTGATACGTTTTTTAAACAAATCGCACAATGAAGAAACAATCATCTC ATCAGCAACCATCAGTCAACAAAGTGACATCCATCTCTAAACCAAGATCA TTGGATGTCCTCATGAAAGGCACTGCTGTATTGGATGTCAAATCAAAATG TTTTTCATCAACAACCACGGCCACAACTTTAGCGAAACCAATGAAAACTT TAGAAGAAGATGAAGAAAATAAAATTGAAAAGGTTTATTTTGAATAAAGT ATCATTAATTTTCAAAATCGTTTTTCCCTGTTTTAATTCCAAATTAATTT CATTTAAAGCTGTTGTAACCTTGTAGTACAATTGGCTGCTTTCTTGATAA GCTCCTGTTTTTGATTCAATTGAAAGTTCTCATCCCAGTTCAAAATTTTT TGGCTTCTTTTCTCTAGATTGAGGAAGATTCATCGCTAGAAGATCAACGT AAACCTGCTATTGCTTCAGTTGCAAATACCACAAAAATATTGAAATTGGA ACGGAGAAGCAAGCCCAAGAAAAAGAAACAGTATAATGTCCTCAAAAAGA AAGAAAAGAAATCAGACGACATGCTTAAAAGGTGACCCCTTTTTATACAT TTCAAACCCTGTGAAATAGCATAGTTTGAAAATTTTAACTTTTTTTTTAC CTTCATTTTGTTTTGGTGGCCTAATGAGATACTTAGATGTGTCAGTTTTA AAACATAGTTTATAGATCCGGTAAAAATTATTTATAGCTTTCCCCACTTG AACTGGACAAGGTGGAGTTTTTACAAGCTCTTAATTGATTTGGTTGGTCG TTAACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACACTTTTTT TTCTAACGCCACATTCTTATTACTTCAAATGACCAATTATCAAAGTATCT CATAAAAACTTCATCTCATCTGCCTTAAACATAATTTGAAACTCATTTAC GATTACATTTTAGGGAAAGTACGTTCAGTAGTGAGAGTATGTTTGATAAT CAAGAATCAACTTCCTCAGGACTTTCGCAAAGACTATCCACCCTCTCCAC AACATCTGTAAAAAATCGATTACAATCTTTTGAAAAGAATGATGAGGAAT TTTACAAGATTATCAATCAGATCACCAAAGAAAATAGTGGTGTAGATCAA GTGGATGATCAAACTACTGAGGAGGAACTGGTCACATACAGAGAATCAGG ACTTGATTGTCTACCAATGAATACATCTGAAAATACCAGCATTTCATCAT CTACATCTAATACTCCACAAAAAAAATCTAAAATAAACAAAACTTTATCC AATCAATCAGAAAAAATTGATATTCTCAATACAGAAGAATCACGTATCTC AACACAAGCTTCACAGTTTTCTTCAAAAATCTCTTCCCTTTCTTCACGTT TATCCAAAGTTTCTACTCAGTCTTTGAGACCATCTAGAATCTCCCCAGGG ATATCACAACAATCCTCCCGGAGGAGCTCGCAGAGGTCTAAATTATCACC AGGAACTCCACAATACAGCTCAAAGTTCAAGGTTCAAAGCTCAAGATTTT TATCAAAAGTCTCAATTAACCCATCTACAATGGAAAGTCATAGAGATTCT TTGCTATCCACCAGAGAAGAAACTTCAAGACCAGGGCTTCAAGAACACCT CATTGTAGAATCGCCTGAGAAATCTTTCCATCAACAATCATCCATCAGAT TGCCTAAATCGCCAGGATCAAGCGAGAACCTGATTGATGACTCTCATCTT AATAAAGAAAAAGTAATTATGATATTTTGATTGTGAAAACTTTGCTTTAT ATCCTTTGAATTCGACTACTGTGGTTTAAAAGTCTGGAAAAAGTTAATTA AGACTAGGGTATTGAAGAAAAAAACACATAGAAATTTCGTCATATAATTT CAGTGAGATATAGACAGTAATTTTTGAAATGTAATCTAAAATTTTGCTTT TAGAATTTTTCTATAATATAGAATTTTGTAACAACTTTTGTTACTATTTT TTTCTTCATCGTCAGGTTTCAGAAGAAATCTTCTCAGTAATTGAAGAGAG TGAAGCTGAGGACGAGGAAGAAAAAAGGGATAAANATATTTAGGCGGGGT GAAATCGTTATTAGGCGGGTTGAAATCGTTTTTAGGCGGGTTGAACTCAC CCCGGGGTTGATTTCACGCCGGTCCTGATGATCAAGGATTCACTTCAGTG AAAATGATAGTTATAGCACTTTTCTACAAGATCTTCATTGTTTTCTTCTT TATTTTCATCTTCATTTTTAGAATTTTTTTATATATTTTTTTATTTCAAA TTGTTCCACTCACAAATATCTCTCTAACGATACCAAATTTATAAAGATTG AAGAATTCCTACAAAAGTTATAGGTAAAAGAAAAAAAGAGTGCACACTTA TCGTGAACAGACTTTACATTTTCACGCCGGGGTGAAAATAAGTTAAAATT TTCACCCCGGACTGAAAAAAAGGGTTTTCACCCCGCCTTTCGCCGACGTG TATCCCAAAATGATTTTCACCCCGGGGTGAATTATTTTTCCATTTCACCC CGGGGTGAATTTCACCCCGGCTACGTGTAACCCCGGCTACGTGTAACCAC CGCCTAAGACTAGGGTATTGAAAAAAAAACACATAGAAATTTCGTTATAA TTTCAGTGAGATATAAGACACCCAGTAATTTTTTAAATGTAATCTAACAT TTTGCTTTTAGAATTTTTCTATAATTTAGACTTTTGTAACAACTTTTGTT ACTATTTTTTTCTTCATCGTCAGGTTTCAGAAGAAATCTTCTCAGTAATT GAAGAGGGTGAAGCTGAGGACGAGGAAGAAAAAAGGGATAGATTTCCAAG TGAAGAAGAACTCAACATGCATGGGAGCAAAATGATTTTGGCGGAAAAAC AATCTAACACCTCGTATATAAATCAAGGATTGAGCAATAATAAAACAATA TCACAATTACCATCAACTATACCAGTAAGAGCAAGCAGTTAATTTTATTC AGTTTATTCCGGTATTTTGTTACAAAATATGTCACGATTAGACGACCCTT TAATTTTTCAGGAGCNTTATTCAGTTTATTCCGGTATTTTGTTACAAAAT ATGTCACGATTAGACGACCCTATAATTTTTCAGGAGCCCAAGAAGCCTAG GATATTCATACCATACGAGTTATCTTACTTTTAGTTTCCCCATTAATTAA CTTTTGGTAGAATCTCTTCATCTTGATTCTTAACGTATCAAGTACCACCT GCTATTATATGAGCTGACGTCCTAAAATTAGAAGCAAGCAATTTTTTATA TCATGGGCGTTTATACCACAGATATCTTCCACAAAACACTAGAGGTACGT CAGTCGTAGTAAATTGAAAAGCAACATACTTTGTTCAGTAGAGACCAGAA GCGGTACTGGCAATTTGTTCAATCAGAAGGGAAACAAGGAGGCGAGAGAA TGATCTTGATTGATCAATTTGTCGGCCAAAAATTGTGGTCTACTTTTAAA GATAATTTATGCTACGGCTAGGAACATAGAAGCTCTATCTAGTGTTTTAT ATGAAATATATCTGTGGTTGTTTACACACATTTGAAATCTGAAAAGTATT AAAATTTAAAGTTACAAAATAATGTCGTTTATTGTTTTAATGACTTAAAC TACTCAACTTTTTTTCAGTTTGCAAAGGATACAGGCAGAAGCGTACATCA TTTTTGTACGCAGTACTACACACAAAACAATGATATCCCTTGGACAAAGT ATCTTCACACACCTTCCAAATATGAAGTTGTCAAGAGTAAACCGATCAAC AAGGTATAACCTTTTAACTATTATGCTTTTAAGATGATGGGTATGTGCGG ACGGTAAGGGTCGGTTTTTTCACCTTTCAAAGTCTCTCTAAGGGTCGGAA AAATCAGAAAGTTTTAAATTAGTCTCTCTAAGGGTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCCCCCCCCCCGCGGGGATTACAGTTACCATTAAAAGACA GAATTATAAAGAGACCCTCTTTCTTTTAAAATTAGAAAAGAAACTACCCT TCTTCTTTATAATGTCCTGTTTTTTGACTTTCTAAATTTTCGTGTTAACA CTCTGTTTTTGAGTACCATTTCAGTTTGAAACAACTTAAACTTCTAAATA ACTGAACCCCTTTTTCTTATAAATTCACAAGAGAATTTTGATTCTAAAAC ATGGCCACTGTATAATTTAATTATAATTTATAGAAGTGTATTTCTCAGGT CTATTGACCTCTATGAAACAATCTTACATCTTTACAATTTATAGATCTTA TCTTATTCGTTTGTCAATTCTAGTTTGAATTTCCCTACAGACGGTGCATT TACAACATTGGTTGCCAAACTGTTCCAAGTATCAATGCTCCTATAGTAAA GTGAAATCGTTTGGTATCCTCTAATGCCGTCTTCAGCGAAATTCCTCTTT AATTCGAGATTGTGCCTACGTTGAGGTCGATTTCGAAGAACGAGTTTCTG ACATAGGGAAGATTTATCATAGACATTAAGATGTTTATATACTTCCACCA TGTCCCCGATTTTACGCCAGATCTTGAGGCTAGGTAGGTTCATGACTTGT AAACGTTCTTCATATGAATGGTTTCTATAACCACCGACAAGTCTTGTGGC CCTACGTTGGACACTTTCAATTGCATCAGAGTGTTTGATCAGCCGTGGAG ACCAAACAGCTTGCGCGTACTCAAGGTGAGGTCTCACAAATGCAATAAAA GGTGTGCGGAGCATCTCGGGAGAAAGGAAGTCGAAGCTTCTGTTAATCAA TCCAACGATCGAGTTAGCCTTCTTGATCTTGGTTTAGATGTGTTCTTCGA AATTCAATTCACTATCAATAATCACTCCAAGATCCTTCTCTTGATCAACA TGTTCTAGGACAGAGCCAGCGATCTCGTAAGGATGTGCATGTTGAATGTT CCAGAATTTCCCTAGTGTCAACACGTGGCACTTGCCAGGATGGAATTTCA ACAACCAGTCGCCAGACCACTTTTCCATTGGCATTGCCTCGATATCGTGC TGAAGTCTAATTGCATCTCCGGCGTTATTTATTTCTTCAACAAGCTTTGT GTCATCGGCAAAGAGAAACATTTCTGAGTTGGTAACTTCAGCTAGATCAT TGATGTAAATAACGAAAAGGAGTGGACCTAAGACACTTCCTTGTGGTACA CCACTTTGCACCTGGCATTTCTTAGATAACTTTCCATTGACCTTCACATA ATTGTTAACGATCGGACAAAAATGCTTTCATCCAACCAAGTACCCTTCCT CTGATACCATACGCTTCGAGTTTTCTTAGTAATCTGCGATGTGGAACGGT GTCAAATGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTTGCGAAGTCGAAATAGATTACGTCAACAACCTTATCATTGGATATCGA GTCTGCACATTTGTCTAAGTAGTGAAGTAGTTGTGTCACTGTCGATCGCT TACCCATAAACCCATGTTATTTGGTTGATAGCAATTTCTCATTCGTGAGG TGTTCCATTATTTGTTTCTTTAGGATTCTTTCCATTACTCTACACGCAAC TGATGTTAAACTAACGGGCCTTTAGTTTTCTGCAAGGTTCTTTTTTCCTT TTTTGTAGATCGGGGACGCATGTGCAGTCTTCCAATCATCAGGTAGTTTA CTTTCTACGAAGGACTTGGCCATGATAGTATGTAAAGGACCGGCTATGTA AAAGGCCAGCTTTTCAGCATGACNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTG TGTCTGTTCGTGATGGAAACTCAGGTAGTGATCCAGCAGGTTCATTCGTA AAAACACAGCAAAACTGATCCTGTAGGATATCAGCTTTATCCTCATCAGT AAAACGAAGTGATGATTTATCATTTAGATCAAGGAGAAGAGGGCAAATTC CCGTTTTGGTCTTCATTGAGTTCCGGATATGCTTCCAAAACTTCTTAGGG CTTCTTTTTGCTTGACCACAAATTCGTTCTTCTAGTCTTCTTCTTTCTCG TCTGATCTTTCCTGTAACCTTGTTTCTCGCAGTAGCATAAATAGCTCTAT TTCTCTGTTCCGAAATTGTACGTATTGATCTTATCCATTTGCGATGTAGG CGACGTTTTTCTTTTAAGCTTTGTTGAATATCTTGATCGATTGCAAAACT TCCCTTTTTTCCGTAGGCATGTTTCCCCTTCGTACGAGGAACGTACCGAT TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTA GTTATAGTTTTCAATAATGCATTCTGTTTCAAGGTAACATTCGAACGTAA ATGATAGAACACTGTGATCACTTTTATGAAGTGGTGAAAGATAGTTTATG TTGCTAACCTGGCTTTCTTCATTTGTCAGAATCAGGTCAATAAGTGATGG CGTATCCGTACCTCTAGCTCTTGTTGGTTCATCGACGTGTTGGTAAAAGA AGGAGTCTCTTAAAGCTTCGAGAAATTGTTCGTCTTCCTTCGTGTCATCG TGAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCC TTCGTGTCATCGTGAGGAGTTGACCAGTTTTCCCAATTGATATCTTTATA GTTGAAGTCTCCGACGATACACTTATGACTGTATTTCTTATTCATTGTTA TTTCCTTCAGAAGAAGATTAAGTGCTGTATTGTTTTTAGCTGATGTTGGC GTGTTGGTTGGACTTCGATACATACATCCAAAAAGCAAAGAATCCGCTCC TTTGAGTTTGATTTCTAGCAAGCATACCTCCTGAAATTCACTATTGGGTG TCACTTCGACTACATTTTTGATCGATTTATGTGTCAAAACGATGATTCCA CGTCCAACATTATTTAAGGCATTTGTTTCGTAGGGTTCGGAGTAGCCTTT AATGTGGTAGTCTTGTATGAGACGTTCTTTTTTCGAATGTTTTGGTTTTA CTTCACAAATTGCAATGATATCGGGTTGTTCTTTTGAAATCACTTCATTT AGTTCTTCTTTCTTTATTTTAGTTAGTTGGTCTGCACGTCTGCATTAGTA TATAGTATGTTAAGTTTTTTTCGTTTGTTAGTTTGTTCGTCTTTCTTCTT TGTTACGTCTTTTTTTGTGTTTGGTTTATTGCCGATCTTTGGCGTTTATC TTCTTTACACCGAATCCGTTTTTTGCAAAACATTAAACATTCAAACATTA ACCTTGATGTCTACTGGGAAAAAATCTGTTGCAAATATATAAAGTATTGC AAGGAAGTAAATTATCGAAACATAAAATCTATTGGAAGTTCATTTAAGTA AGTGCCCAGTATCGCAAATACAATAGATTTTCAATTCAAAATAAGGCTGG ATGTATTTTTTGGGATAAAAAAATTCGTGACAAACTTACTTTTCCCAGTC TTTTCCCATCTTAAATCTTGGTTTTGATCGCACAATAGATTTATGGCTCA CCTGATAATATCCAGAAAGAACTCAACGGAGAAACTTTAGAATATATTTC AGATGAACAAAGTGAAGGTGAGCGGAGATTATCCTTGCTAGCGGAGCGCA TCATGAGTCAGATCGAAGAGGATCAGAAAGCAGGGGAGGAAGAACAAGAT CAATCTTTTCTGAAATTACAAGATGTCGTCAATGAGTTGGTATGTGACTT TAAAAATGACATTTATTCTAGTCACCCCTTGCGAATTTGAAACATTATTC CTTCTTCACTTATTACACTCAGTGTAAAAAGTTCTTCTCCGTCTTAGACG AATTTTGGTCTCAGCGAAGTCTCTTTAAGTCTTTCTCATCTCGAAATTCT GTATAGTTCACCAAAATTTCAAGAGTTTATGCTGATTTCTTGTGTTAAAT CCATTTTCTGGCTCAGACGAAAAACTGTGCTGTATATTGCCGAGTGTAGT AACTACCTCTCTTTCTCAGCTCGTATAATACAGTTGACTCTCTAACTCGA TGTTCTACTATTCGATAGGCTCCCTTATTCGATGAAATTTAAAATCCCCG TCAACAAGAGACTCTCCTAAACAACGCTCTCTTATTCGATAAGCTCCCTT ATTCGATGAAAATCTAATTCCCCTTGAAGATCGAATTAGAGAGTGTCAAC TGTACAACATTTCATCTTTTAAAAATGTGATTGATCAATTCATTGAATAT TTTTTCAACTCTGATGACATTTCAGTTCCATGAGAAAGAGCAACAAAATG GCGTGATGGTGGATTTTGAAGGTGAAATAATTGGTGATAAAATGAATGTT CATGAAAATTCTTCAAAGTATGTTTTATGTTTCCTCTTTTTAATACGATA TTGTTCTATTGGGTTCTTCCAGAAAATGTCCGTACATAGGGGTGGAGGAT ATAATGTCCGGGGGGGGGGGGGGGGAAAATCTAAAAAAAATTTCCCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNGGGGGGGGGGTAGTGGAAAATCTATAAAAAATTTCCCTGTT TGGGGTAAACTTGCTCTATTTGGGAGTAATTTTGCTCGGCTTGAGGGTTA ATTTGAATTGCCAGGGGGTCAAATTTTTTCTGGAAAAGTCCATTCTGTCA CTGAATAGAAGAATGCCTTCGAAGGGGTCGTCTTCCCATTAGCTGTTTTT TTTGTAGCAATTGATACGTATTCAAAACACTATCGGCTTCAATGCATGCA ATCATTTTGTGATGTACAATGATTTTCCAAGAAATTCACCTTAAATATTC ATACTAACTAGAATTTGAATGTCTCTCCTAAAATTTACTTATTTTCTAGT TACTTTGGAATTGTTTGTTTAAGGAAAGAAATTTTTCCGCAACAAACTTA CGCGGAATTTAATTTCGCGGTTTTTTGATAAAAATCCGCAAAATTAAATT CCGTGAAAGAAGAATATTCTCATGACTTATATATGGAATATATTTCACAT ATAGAATTGGTGTTTTTGGGGCAAAATAAGACATATTTTAAACCAAAATT CCTCTCAACCGCCGCGGCGCAAAAAATTCCTTTCCGCGAAAATTTCTTCC CTTAAGGTAATTCATCTTTCACAATTTTTGCAGTACAAAGCTCTTTCAAA CACCAGCACCTCCAAAGTTTCGAGTACCTCCCCAAGAAGTGACCAAGGTA TTAGCTCCCGACTATGTTAGTTTTCAATTGACTGAAGAAAACCTTCTAGA GAATATGGATATCGATGAAGTGGCTCAAACGAACTTTTTCATTGAAGATC GACCTGAAGATGAGAAAGAATTTGTCAAAAGGTAAAACTTGTGTTTGTTA CTCTTGTTTTCCTGTTTTGTCACCTTACGTAGCCGATGTGACTTTTTCAA GGTTTTGTCACTCCTTACGTAGCCGATGTGACTTTTTCAAGGTTTTGTCA CTCCTTACGTAGCCGATGTGACTTTTTCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTCTTCCAGAAAATGTCCGTACATGGGGATGGAGGATATAATGTCCG GGGGGGGAGGGGTAATTGAAAATCTACAAAATTTTCCCTGTCTGGGGTAA ACTTGCTTTATTTGGGAGTAATTTTGCTCGGCTTCAGGGTTAATTTGAAT TGCCAGGGGGTCAAACTTAATCTGGAAAAGTCCATTCTGTCTCTGATAAG AAGAATGCCTTCGAAGGGATCGTCTTCCCATTAGCTGTTTTTTTTGTAGC AATTGGTACGTATTCAAAACACTATCGGCTTCAATGCATATGCAATCATT TTGTGATGTACAATGAACTTGCGATTTTCCAAGAAATTCACCTTAAATAT TCATACTTGAATGCCTCTCCTAAAATTTGCTTATTTTCTAGTTAGTTTGG AATTGTTTGTTTAAGGGAAGAAATTTTTGCGGAACAAACTTACGTGGAAT TTAGTTTCGCGGTTTTTTGATAAAAACCCATGAAATTAAATTCCGTGAAA CAAGAATATTCTCATGATTTAAAAAATCACATATAGAATTGGTGTTTTTG GGGCAAAATAAGACATATTATTTTAAACCAAAATTCCTCTCAACCGCCGC GGCGCAAAAATTCCTTTCCGCGAAAATTTCTTCCCTTAAGGTAATTCATC TTTCACAATTTTTGCAGTACAAAGCTCTTTCAAACACCAGCACCTCCAAA GTTTCGAGTACCTCCCCAAGAAGTGACCAAGGTATTAGCTCCCGACTATG TCAGTTTTCAATTGACTGAAGAAAACCTTCTAGAGAATATGGACATCGAT GAAGTGGCTCAAACGAACTTTTTCATCGAAGATCGACCTGAAGATGAGAA AGAATTTGTCAAAAGGTAAAACTTGTGTTTGTTACTCTTGTTTTGTCACT CCTTACGTAGCCGATGTGACTTTTTCAAGGTTTTGTCACTCCTTACGTAG CCCATGTGACTTTTTCAAGGTTTTGTCACTCCTTACGTAGCCCATGTGAC TTTTTCAAGGTTTTGTCTGTACTTACGTACTTTCAAAGTACAAACAATCT GCTTATTGATTTTAAAGTAAAAATCTTTAAAACTTTCCAAATTTGTTTTC ATAGAAATTTTCAAACTATATATGTGACTCCTCAAGCGATTTGGAGTACA CAAAAGACCGATCGGCCCAAAGCGGGTAAAATACCCGTCTTAAAGCGGCC GAAGTAAAATCTTTAGCGGCCCATCGTTCGTGAAGATCGGCCTCCAAGCG GGCGAGAGAATTTTTGGTCCGCTTGAGGCCGCTCTTTTAGCGGCCCTTTT TGAGCAAGAGAATTCCAAGCGGCGTCTGGAGCGGTCGAAAGTCCGGTCCA AAAAAGTCCGGTTCTAAAAAACTACTCAATCCTCAAAAGTACAATCTTTT TCAAAAATTAGAATTGGGGAGACGTCAATAACGTTTAGCATTTTAAATTC TTTCGATATGAGCCATATATGATTAAGATAATGTTGAAAAGGTGTATCGA TAGTGAAATTATCTATCTTGTATCGATAAGGAAGAGACGCTCGTGAAAAT ACGAAGAAAGTGAGTTGATAAAACTAAGCATAAAAGACGCTCGTGAAAAT TACGAAGAAAGCGAGTTGATAAAACTAAGCATAAAAGACGTTCGAGAAAA TTACGAAGAAAGTTAGTTGATAAAACTAAGCATAAAAGACGCTCGTGAAA ATTACGAAGAAAGCAAGTTGATAAAACTAAGCATAAAAGAAGCTCGTGAA ATTTACGAAGAAAGCAAGTTGATTAAACTAAGCATAAAAGACGCTCGTGA AAATTACGAAGAAAGCGAGTTGATAAAACTAAGCACAAGAGACGCTCGTG AAAATTACGAAGAAAGCAAGTTGATAAAACTAAGCATAAAAGACGCTCGT GAAAATTACGAAGAAAGCGAGTTGATAAAACTAAGCATAAGAGACGCTCG TGAAAATTACGAAGAAAGCAAGTTGATAAAACTAAGCATAAAAGACGCTC GTGAAAATTACGAAGAAAGTGAGTTGATAAAACTAAGCATAAGAGACGAT CGTGAAAATTACGGAGAAAGTGACTTGATAAAACTAAGCATAACAGACGC ATTTAAACGCTACAAAGAAATCAAATTCAGAAGACTAAGCATGAGAGATG CTTGTGAAGGCAATGTAGAAAACGAGTTTATATTTGTTGACTATTCTTTT TAAAACATACGAAGAAAAACAAGTTGATAAAAGTATGCATAAGAAACTCT AGTGAAATTTATGAAGAAAACAACTATGCTTTTGTTACAAATGGCTCAAT AAAAGTTCTGGCTAAGAGACAGGGGTGTTCTGTTTCTTAAAAAGTCTGTT GACGTACTCCTGCAACCTATGTCTTTAGACATTTTTGTTTGTAAAAATTC GGACACTTAAAAACCACTACAATGACTTCTAAGTTGTATCAATAAAGTTT CATGGCTAATTTTCTATTGCTAATTTTGTTATCGTTATCGATTAGTTTTT ATCCCTTATAACTTTCATGGATCATTTATTGTTTAACTTTTATCGATAAA GCTCCTATCGCTAATTTTCAATCGCTTATTTGGGATCATTAAAATTCCTA TCGATAAAAGTCTATCGATAGGCCTATGTATCGATAGGTGTATCGATTTA ATCGATAATTTAATCGTGTCGATAAAGTGTTGAGAGGGAAAGTGATCCTT TTCCCATGAAATGTCAAATGTCCACAAATTTCAACGTTGTCAAAAATTTC TACCATATCAAAATAAAATCCAAATGTTTTAAAACTGCAAGAAGAAAATC TGTTTCCAACTTCACAACACACGGCAACTCGTTTTCCAAGAAACGAACTC AATGTTTACATTTTCGAAAACGAGGCTAAGTAAAAGTAAGTAAGTAAAGA AATCAATAGCGCCCATCGGGACGAAGCGTACCGGGCATTGGACCGCTCGG GCCCCTTTAGCGGCCTCGAAGCCTCTTCGTTATGGCCGCTTTTCATGATC GGCCATGCATCGGCCTCTTTCGATATTTGAACGGCCTTAGCGGTAAAAAG ATCGGTCCAATAGAGGCTAAAGAGGAACGGTCATTAGACCGATCGGACTT TTGTGTACTCCAAATTGCTTGGGGAGTCACATATTTAACAATTTCTTATT TCAAAATAATGAGCTTTTAAAATAGCACTCTTTATTGAGTGTCAATTTGT TTAAAATCTCTGATATTTCTTCTTTTTTTTCTTAAAAGGCTTCTTGTGTT CAGAATAGTATAACAACCTCGTGCTATGGGTAAAATAGCACTTTAGCTTG ATTCGGTTTGATCAATTTGATTTGTATATTTTTAATAATTTTTTCCCTAA GATTGATCAATCGAAGACATAATTCAGCAATCGAATTGCATCCTGAATTT GACATCATGAATCTAATTGGTGGAGAAGGAATGAAAGATGACGACGCTGA CCATGAAAACGAGGCTGGAGAAGAGTCTGGGACGAGTAGTGAAGATGATG AAGAAGAGGAAAATTGTTCTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033661XLOC_033661Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053341-exon-scaffold_228-1575043694:676053..676284TCONS_00053341-exon-scaffold_228-1575043694:676053..676284Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:675704..675867TCONS_00053341-exon-scaffold_228-1575043694:675704..675867Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:674523..675321TCONS_00053341-exon-scaffold_228-1575043694:674523..675321Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:673311..673511TCONS_00053341-exon-scaffold_228-1575043694:673311..673511Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:672482..672616TCONS_00053341-exon-scaffold_228-1575043694:672482..672616Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:667746..667946TCONS_00053341-exon-scaffold_228-1575043694:667746..667946Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:667118..667209TCONS_00053341-exon-scaffold_228-1575043694:667118..667209Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:666104..666301TCONS_00053341-exon-scaffold_228-1575043694:666104..666301Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1575043694:662161..662333TCONS_00053341-exon-scaffold_228-1575043694:662161..662333Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:676053..676284TCONS_00053341-exon-scaffold_228-1510915933:676053..676284Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:675704..675867TCONS_00053341-exon-scaffold_228-1510915933:675704..675867Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:674523..675321TCONS_00053341-exon-scaffold_228-1510915933:674523..675321Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:673311..673511TCONS_00053341-exon-scaffold_228-1510915933:673311..673511Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:672482..672616TCONS_00053341-exon-scaffold_228-1510915933:672482..672616Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:667746..667946TCONS_00053341-exon-scaffold_228-1510915933:667746..667946Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:667118..667209TCONS_00053341-exon-scaffold_228-1510915933:667118..667209Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:666104..666301TCONS_00053341-exon-scaffold_228-1510915933:666104..666301Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1510915933:662161..662333TCONS_00053341-exon-scaffold_228-1510915933:662161..662333Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:676053..676284TCONS_00053341-exon-scaffold_228-1491911889:676053..676284Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:675704..675867TCONS_00053341-exon-scaffold_228-1491911889:675704..675867Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:674523..675321TCONS_00053341-exon-scaffold_228-1491911889:674523..675321Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:673311..673511TCONS_00053341-exon-scaffold_228-1491911889:673311..673511Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:672482..672616TCONS_00053341-exon-scaffold_228-1491911889:672482..672616Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:667746..667946TCONS_00053341-exon-scaffold_228-1491911889:667746..667946Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:667118..667209TCONS_00053341-exon-scaffold_228-1491911889:667118..667209Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:666104..666301TCONS_00053341-exon-scaffold_228-1491911889:666104..666301Clytia hemisphaericaexon
TCONS_00053341-exon-scaffold_228-1491911889:662161..662333TCONS_00053341-exon-scaffold_228-1491911889:662161..662333Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:662161..676284 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.62014 1.45664 0.369271 0.469266 3.07412 2.04859 2.16495 1.21442 0.837171 0.946014 0.898696 1.46425 0.533309 0 0.39024 1.39409 1.20931 0.86543 0.830215 1.391 0.783207 1.15466 0.307027 0.808795 0 0 0.429625 0.575117 0.403378 0.184464
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053341 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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