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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053265 ID=TCONS_00053265|Name=TCONS_00053265|organism=Clytia hemisphaerica|type=transcript|length=1018bp
GGNtttttttattatattattggaaatatATCAGAACATACAGAAAATAT
CAAACTGAAGCCCCTTCACTTTTAGATGATTTTATTTAAATAATGTTTAC
AGGCAGAAGAAAACGGTTTTTCTCAAAGGGTTGTAATGAGTTCACGgaca
acgaaaaaaaaattctgttttattttgaatttttctttttctttttcttt
gaaaatatatcTTCAATTTCGATCGTCACTTCGATTGTtctctttgaaat
ttttcgttTGACCAGTGTTTCGTCTTTGCCGTGACACCTTTCATCGTCAG
ACGAAATGACAATCACCTCAGGTTCTGAGGTTAAAGAAAACACACATTGA
AAATAGTGAAATTTTGGACGAAATTTAGAGTAGAAACATCAAATAGAAAT
ACTACAATGACTAAGTCGCATCAGGGATGGATGTGTGAAGTTGCTCAGCA
TTACCTTTTTTCTTTGCTCCGTATAGCTTCTCCATAGTGTACTGACTAAA
ACAAGTGCAATTTTTGTGGAGCATCTCATCTTCCCTTTGACTTTTAAGAT
CCGACATCTTtaccaaagttttcaaaatttctagaGAGCGTCCCACTGTT
AAACTGTAACAAAACATTAtgttccaaatttcaaaaagatcgaTTTATTA
AGTATATCGCAAAAATACTTGGATATcgagtcaaaaaaaagttttttaca
aacCCGGAGGGGGGATCTTAATTTCGgaattctttttttcgaaattgaaG
ACCACAGCgtagaccgttagaccataCAGAAGACCGTTGAGAGTTTCTAT
GGGGAGACCTTCAGACCGTCAATCTTTGAGATTCTAATGCATCAAATTCA
TAAAGTTCTAATTCAAATTCGATTTATTctactttgaaaatgaagaccag
TATGTAGACCAGTAGAACAGGAGTAGCCCGGTGGATTTATAGGAGTTTCT
ATGGGGAGACCTTCAGACCGTCAATTTGTGAGATTCTAAAGTCATACAGA
Aagaaaaaagcatcaaaa Run BLAST on NCBI transcript from alignment at scaffold_227:472459..473476 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053265 ID=TCONS_00053265|Name=TCONS_00053265|organism=Clytia hemisphaerica|type=transcript|length=1018bp|location=Sequence derived from alignment at scaffold_227:472459..473476 (Clytia hemisphaerica)
ttttgatgcttttttctTTCTGTATGACTTTAGAATCTCACAAATTGACG
GTCTGAAGGTCTCCCCATAGAAACTCCTATAAATCCACCGGGCTACTCCT
GTTCTACTGGTCTACATActggtcttcattttcaaagtagAATAAATCGA
ATTTGAATTAGAACTTTATGAATTTGATGCATTAGAATCTCAAAGATTGA
CGGTCTGAAGGTCTCCCCATAGAAACTCTCAACGGTCTTCTGtatggtct
aacggtctacGCTGTGGTCttcaatttcgaaaaaaagaattcCGAAATTA
AGATCCCCCCTCCGGgtttgtaaaaaacttttttttgactcgATATCCAA
GTATTTTTGCGATATACTTAATAAAtcgatctttttgaaatttggaacaT
AATGTTTTGTTACAGTTTAACAGTGGGACGCTCtctagaaattttgaaaa
ctttggtaAAGATGTCGGATCTTAAAAGTCAAAGGGAAGATGAGATGCTC
CACAAAAATTGCACTTGTTTTAGTCAGTACACTATGGAGAAGCTATACGG
AGCAAAGAAAAAAGGTAATGCTGAGCAACTTCACACATCCATCCCTGATG
CGACTTAGTCATTGTAGTATTTCTATTTGATGTTTCTACTCTAAATTTCG
TCCAAAATTTCACTATTTTCAATGTGTGTTTTCTTTAACCTCAGAACCTG
AGGTGATTGTCATTTCGTCTGACGATGAAAGGTGTCACGGCAAAGACGAA
ACACTGGTCAaacgaaaaatttcaaagagaACAATCGAAGTGACGATCGA
AATTGAAgatatattttcaaagaaaaagaaaaagaaaaattcaaaataaa
acagaatttttttttcgttgtcCGTGAACTCATTACAACCCTTTGAGAAA
AACCGTTTTCTTCTGCCTGTAAACATTATTTAAATAAAATCATCTAAAAG
TGAAGGGGCTTCAGTTTGATATTTTCTGTATGTTCTGATatatttccaat
aatataataaaaaaaNCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053265-exon-scaffold_227-1491911889:472459..473476 | TCONS_00053265-exon-scaffold_227-1491911889:472459..473476 | Clytia hemisphaerica | exon |
| TCONS_00053265-exon-scaffold_227-1510915933:472459..473476 | TCONS_00053265-exon-scaffold_227-1510915933:472459..473476 | Clytia hemisphaerica | exon |
| TCONS_00053265-exon-scaffold_227-1575043694:472459..473476 | TCONS_00053265-exon-scaffold_227-1575043694:472459..473476 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_227 | supercontig | scaffold_227:472459..473476 . |
Blast
The following BLAST results are available for this feature:
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