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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053077 ID=TCONS_00053077|Name=TCONS_00053077|organism=Clytia hemisphaerica|type=transcript|length=513bp
ATCCTGAATGCCAAGTGCGCATGTTCAGAAAAGAGATTCAATGGATGGAC
AAAAAAACACACGATCAAGAATTCGCAGCGATTCATAACAAAATGCTTCT
CGAAAAGCATATAGAGACTTCAAGGGAACTACAACAAACTCGAGATGAGA
TGAGAGACATGAAGTCAAAGATAAATTCCTTAAGTGGTTTCAAAGGAAAC
CAAGCAGAAATAAGTGATGCTTACTCCCTGATTAAGGAAACTAAAGCCGA
GTTAATAGCCGTGAAAGCCGAGTTACAAAAAACGAAGACCGAGTTAACCT
CGACAAAGATAGAAcacttgaaaacaaagaatgAGCTTCAAGAAGTTCGA
ATAGAGGTAGCAGATCTCAACAATCATTGCAATCAGCTTTACCAGCTAGT
CGAACATtcgtctgaaatcgtgtgtagCCATCTACTCAACGAAAAAGAAT
CCGAAATtgtatttgaaaacaaaagttttgaaaatctgGTACCCTTACTA
GTTAAGaagaatt Run BLAST on NCBI transcript from alignment at scaffold_225:204451..206710- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053077 ID=TCONS_00053077|Name=TCONS_00053077|organism=Clytia hemisphaerica|type=transcript|length=2260bp|location=Sequence derived from alignment at scaffold_225:204451..206710- (Clytia hemisphaerica)
ATCCTGAATGCCAAGTGCGCATGTTCAGAAAAGAGGTAAACACGATTCAT
TATAATCATTGGCATCCGGGGGGGGGGGCACTCGATCTGAAAACGACCAT
ACGTTTGGCCCAAAATTTGGCTTCTAAAATCTGACCCTTACAGTGCAGTG
AATTTCCATTAAAAATCATACCCTTACAGTGTACTTTTTCAAAATTTCTC
GCCCGTAAGGGCGAAAATGTTTGCAATTTTCCAAGAAAATGTGGAATTTT
TCCTCAAAAATTTACCAATTTTGTGTCAATTTTACCAAAAAATTGGCCTT
TTATCACAATTTCCTACCCTTACAGTGCAGTTCAGTGCAGTTTTGTAATT
TCCTACCCTTACAGTGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCGAGCCACAACCTCATTTTCTGGCAGGCTCGTTGTGGCTCGT
TGTGCCATTTTCTGGCTCGTTGTGTGTTTTAGTATTACCCTTTTGGAATC
ATTTTACTCTAGGATTCTAGTAAGTACTCTATAAAATTATCATGTATATA
GTTTGTTAAAATTGAAGCATTCGTTGAAAAATAACAAACAAAATAACAAT
TGGGCACAATTAAAGCTAATCGTGGACTTTATATATAAAAATAACTCTCG
ATTTTTCTTAAAAATTAGTACTGAAAATGACTGGGATATTGCAATCTTCT
GGACACTGATTAAAAGAGAGTTTCATGTTGTATATTTCAGGTACCACTTC
ATTTGAAAAATGAATGCCTATATGAACCAGTTAAATGCAAATTCGCTTCA
CTTGGCTACACTGGGATGGTAAGACGTCAACAGCCTAACTTTGAGTAAAA
CAGGATGTGCTAAAATGTTTAAGGTTAAAACGACTTCAATTTTGCTGTAG
TCTACACGATAGATAGTCACAGGCTTTAGGCCTTCCTATCCTGAAGAGGA
GTAGTTTTACGCTTGGAGCGAAGGCAGATATGACGTAGCTTAATTTTGCT
AGAGCAAGAAAATGCAAAAACTGATTTGAGGAAATCTTCGTCATCTTTCC
CCTCCTTGAAGTTGATCAAAAATATTTTTAGGGGGGGGACTTTTTCAGTT
TTAAGGTATATTGAATGCTTTTTTCTTCACAGATTCAATGGATGGACAAA
AAAACACACGATCAAGAATTCGCAGCGATTCATAACAAAATGCTTCTCGA
AAAGCATATAGAGACTTCAAGGGAACTACAACAAACTCGAGATGAGATGA
GAGACATGAAGTCAAAGATAAATTCCTTAAGTGGTTTCAAAGGAAACCAA
GCAGAAATAAGTGATGCTTACTCCCTGATTAAGGAAACTAAAGCCGAGTT
AATAGCCGTGAAAGCCGAGTTACAAAAAACGAAGACCGAGTTAACCTCGA
CAAAGATAGAACACTTGAAAACAAAGAATGAGCTTCAAGAAGTTCGAATA
GAGGTAGCAGATCTCAACAATCATTGCAATCAGCTTTACCAGCTAGTCGA
ACATTCGTCTGAAATCGTGTGTAGCCATCTACTCAACGAAAAAGAATCCG
AAATTGTATTTGAAAACAAAAGTTTTGAAAATCTGGTACCCTTACTAGTT
AAGAAGAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053077-exon-scaffold_225-1575043694:206676..206710 | TCONS_00053077-exon-scaffold_225-1575043694:206676..206710 | Clytia hemisphaerica | exon |
| TCONS_00053077-exon-scaffold_225-1575043694:204451..204928 | TCONS_00053077-exon-scaffold_225-1575043694:204451..204928 | Clytia hemisphaerica | exon |
| TCONS_00053077-exon-scaffold_225-1510915933:206676..206710 | TCONS_00053077-exon-scaffold_225-1510915933:206676..206710 | Clytia hemisphaerica | exon |
| TCONS_00053077-exon-scaffold_225-1510915933:204451..204928 | TCONS_00053077-exon-scaffold_225-1510915933:204451..204928 | Clytia hemisphaerica | exon |
| TCONS_00053077-exon-scaffold_225-1491911889:206676..206710 | TCONS_00053077-exon-scaffold_225-1491911889:206676..206710 | Clytia hemisphaerica | exon |
| TCONS_00053077-exon-scaffold_225-1491911889:204451..204928 | TCONS_00053077-exon-scaffold_225-1491911889:204451..204928 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_225 | supercontig | scaffold_225:204451..206710 - |
Blast
The following BLAST results are available for this feature:
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