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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052813 ID=TCONS_00052813|Name=TCONS_00052813|organism=Clytia hemisphaerica|type=transcript|length=459bp
CTTAGAGTACTAAACATATAAACATCTCAGGATGAAGTTGTTCATTGTTT
GTGTCTTCATTTCAGTGGCTTTCTTTGTCACCGTGAACGCTGACTTGaca
acttttttacaaaaaaatcgaGATTCTTTACAACAAGATGCTACAAACCA
ACAAAAACGCAGCATAAAAGAATCCATGCTTCGGCCGGCTAATTCATGGA
CAAGTCAAATACTTCGCATCAATCCTGCCAAAGAAGAAACCAAACTCGAT
CGAGCAAAAGTTTTCAAGAGGGCCATCACACCTTTTTATTTTGGGAGTGG
CAGTGGAAGTGGGTCAGGATCTCGCTAGCGACAAACCTTATCAGGAAATT
CTTTTATCAATAttggaaaataattaaaaaaaaaagtgaattgggctctt
ccagaaaaaatccgttcatggggggtggaggatgaattgtccaggggtat
tgaaaaatt Run BLAST on NCBI transcript from alignment at scaffold_220:335526..336533+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052813 ID=TCONS_00052813|Name=TCONS_00052813|organism=Clytia hemisphaerica|type=transcript|length=1008bp|location=Sequence derived from alignment at scaffold_220:335526..336533+ (Clytia hemisphaerica)
CTTAGAGTACTAAACATATAAACATCTCAGGATGAAGTTGTTCATTGTTT
GTGTCTTCATTTCAGTGGCTTTCTTTGTCACCGTGGTGAGTTCTATTCAT
TTCAAATGCGTCATTTTCGAAAGCTCTTTCAATCTGGACGGGACCTTTTT
GTTTTAGTTAGGCTGAAATGTgctgaaattttcaaagatcTTGATCTCTT
CATTTCACGAAAATGTATCATAATAAAACTAGACTAACTTATTACTGAAG
TTTTTCATATCTTTCCCTCCCCTCACACTTTTTTACGACAGCTAATTTAA
AACTTGCAACACTATCCAGTAGCTTGGTAGGAGGGAAGTGCCCCGAGCGG
CCGATTTTTTTATGGGGGGGGGGCAGAAATACAAAGGGCACAAAAAGACG
CCACTAATTACAAATTTCGGCACCTCTTTGCTCTTTATTAGTTTACACCT
TATTACAGTTTTCGTAgtcaaaagagagaaaataccccaAATTTTCGTGC
TCGCTCCCCTTGTGTAATTTTCATAggggcgccaaaatcaaaatcttcta
aaattgtCTCCCCAGTTTACCCAGATTTTAGCcaacccaccacgctactg
aatCCTTACAGTTTAAACTGTTTATGTTTTACAGAACGCTGACTTGacaa
cttttttacaaaaaaatcgaGATTCTTTACAACAAGATGCTACAAACCAA
CAAAAACGCAGCATAAAAGAATCCATGCTTCGGCCGGCTAATTCATGGAC
AAGTCAAATACTTCGCATCAATCCTGCCAAAGAAGAAACCAAACTCGATC
GAGCAAAAGTTTTCAAGAGGGCCATCACACCTTTTTATTTTGGGAGTGGC
AGTGGAAGTGGGTCAGGATCTCGCTAGCGACAAACCTTATCAGGAAATTC
TTTTATCAATAttggaaaataattaaaaaaaaaagtgaattgggctcttc
cagaaaaaatccgttcatggggggtggaggatgaattgtccaggggtatt
gaaaaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052813-exon-scaffold_220-1491911889:335526..335610 | TCONS_00052813-exon-scaffold_220-1491911889:335526..335610 | Clytia hemisphaerica | exon |
| TCONS_00052813-exon-scaffold_220-1510915933:335526..335610 | TCONS_00052813-exon-scaffold_220-1510915933:335526..335610 | Clytia hemisphaerica | exon |
| TCONS_00052813-exon-scaffold_220-1575043694:335526..335610 | TCONS_00052813-exon-scaffold_220-1575043694:335526..335610 | Clytia hemisphaerica | exon |
| TCONS_00052813-exon-scaffold_220-1491911889:336160..336533 | TCONS_00052813-exon-scaffold_220-1491911889:336160..336533 | Clytia hemisphaerica | exon |
| TCONS_00052813-exon-scaffold_220-1510915933:336160..336533 | TCONS_00052813-exon-scaffold_220-1510915933:336160..336533 | Clytia hemisphaerica | exon |
| TCONS_00052813-exon-scaffold_220-1575043694:336160..336533 | TCONS_00052813-exon-scaffold_220-1575043694:336160..336533 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_220 | supercontig | scaffold_220:335526..336533 + |
Blast
The following BLAST results are available for this feature:
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