TCONS_00052737 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052737
Unique NameTCONS_00052737
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052737 ID=TCONS_00052737|Name=TCONS_00052737|organism=Clytia hemisphaerica|type=transcript|length=185bp
GTTCGGTCCTCTTGTGCCTCCGCGGCAGCAGAACTCCATGGAACAAAGAC
CACCTCTCCTCTTCACTCACGAAAAGTTCGAGTGACTGTGAGGTTATTTG
CGCAATTTAATtcctttattgaaaaatttctaaattattaCTATTGACTA
CTTACGTTTGAGATAATATCAAGATCCATACCGGG
Run BLAST on NCBI

transcript from alignment at scaffold_219:60298..60482

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052737 ID=TCONS_00052737|Name=TCONS_00052737|organism=Clytia hemisphaerica|type=transcript|length=185bp|location=Sequence derived from alignment at scaffold_219:60298..60482 (Clytia hemisphaerica)
CCCGGTATGGATCTTGATATTATCTCAAACGTAAGTAGTCAATAGtaata
atttagaaatttttcaataaaggaATTAAATTGCGCAAATAACCTCACAG
TCACTCGAACTTTTCGTGAGTGAAGAGGAGAGGTGGTCTTTGTTCCATGG
AGTTCTGCTGCCGCGGAGGCACAAGAGGACCGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033340XLOC_033340Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052737-exon-scaffold_219-1491911889:60298..60482TCONS_00052737-exon-scaffold_219-1491911889:60298..60482Clytia hemisphaericaexon
TCONS_00052737-exon-scaffold_219-1510915933:60298..60482TCONS_00052737-exon-scaffold_219-1510915933:60298..60482Clytia hemisphaericaexon
TCONS_00052737-exon-scaffold_219-1575043694:60298..60482TCONS_00052737-exon-scaffold_219-1575043694:60298..60482Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_219supercontigscaffold_219:60298..60482 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052737 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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