TCONS_00052599 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052599
Unique NameTCONS_00052599
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3097

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052599 ID=TCONS_00052599|Name=TCONS_00052599|organism=Clytia hemisphaerica|type=transcript|length=3097bp
TCCAAGAGCTGATTTAGAATTACGAGGACGTGATAGAAGTGATCCAGCTC
TGACAGCTGCAGTAGCTGAAGTTTGTTTAGATCACCCGTTGTTAAAGACA
GGAGCTGAAATCATTTGTGCTCCATCAAACACTGAAAATAGTGTAGAGCA
AGTGTTCAAATCATGTGTTGAAGATGTTCTTCCTATTCTTATTTTCGCTG
TTGATACTGAAACACTATGTCAAAAGgatttgGATGAACTTGCACAAATC
AATTCATTTGCCATGAATAGTTTACCAGTGTTTTTCGTTAAAGTTCCTCC
CCATTGTACGCACGAGTTGACAGAATCGTTGCAAGATAGTCTCAAACAAG
AACAGGTAGATAAAACGAATGAAGGAAACAGAAAATTATACGAACAATTA
GTTGAACTTGGATTTTTGAGCAAAGAAGCTGCACCAACAGAAACAACTAC
TACTTCAACAACTGAGCTAGGATCATCGGCATCCATTATAGACAGTGTCC
GACCAAAAAGTACATTGATCGAAGACTTTTCTTTATTTCCTTGCTTTCTT
ATGTTTGTACGTCAAATTTTACAGTATCATATCATTGCAGCTGCTTGTGT
TTTGAATGAAGCTCATACTCGTTGCCTGGGAATGTTTATCAATTCAGCTT
TCGATTTAGCCAGAGACATTAGTATTACACCAAAAAGGATTTCATATGCT
CGTGCTAAAGAAGATGAACTATTTCGATCTCTAATGGATATTGCTAATAA
AAAACAAGAAGAGATTAAAGAGGTTATACATTCGACGATAGAAAGTTTGA
GCCCTCAACTTCAAGAGGAAGCAGGACTATTAAAAATTCAAGGCGTTGAT
TTCCAACAGAACTTAGAACTTGTTGATATTGAAGACCTGGAACGTTGCAT
ACAACAAGTTCAAGAACTTGTATTGAGCCGTTTAAATCAAGCGGTCGCTG
GTAAATTGATTAGCTCTGTAGAATATTTGAAGGAAAGTTATGTTGGAACC
TTGACCAGATGTCTGACAAGTCTGGAAAAAGCTGATCAAGAATTCGCCAG
AGAAACGAGTGGTGTGGCATCAGTGGCTTTGAAACAGGTTTTGGATGCGG
CCTACCAAGTGGAAGTGACAGTTCAAGCTAGTTTCTCGTTGACACGTTTG
TTATGGGAAAAGTTAAAGCAAGCCGTCCAAATGTTACCTGGAAAGCGTTC
ACCAGTCGTCGACGCAACGTGGAAGAAAAAGATCGCTGCCGAAGTTATCT
TGTGTATCAGTGAATCAAGACTGGCCAAAAACATCTGTTCTCAATTTCGA
ACGCGTTTGATTCGCTCACACGAAGCGTTCACTCAATCAATGCGCGTTTT
GGAGATGCGCCATAACGGGCGTATGGAGAAGAAAGAGGAACAGCGAATGA
AACTGAGAAAGGTGTTCGCACCCCGTGTCGCCCGTTGTGTTTTGGACAGC
ACATCTTTACGTGATTTGGTCTTGTACGGCATGCCTCAACTAGGGCGTGA
AATTGGACGTGGTCAATATGGAGTCGTGTATGCTTGTGATAAATGGGGTG
GTTCTGGTCCATGCGCTATCAAATCAGTTGTGCCGCCTGACGATAAACAT
TGGAACGATCTAGCCTTGGAATTTTATTACACTAGagCCATACCTGAAAA
TGATCGCCTAGTACAAATACGTGGTTCGGTCATCGATTACAGTTACGCAG
GTGGTAGTTCGCCCGCCGTCCTTCTCGTCATGGATCGGATGCAGAGAGAT
CTCTACGCAGGTATCAAGAACGGGATGAGTTTCAGAAGTCGTCTGCAAGT
CGCATTAGATGTCGTGGATGGATTACGTTACTTACACAGTCAAGGTCTTA
TTCATCGAGATATCAAACTCAAGAATGTTCTGCTTGATTCAAAGAACCGT
GGCAAGTTAACAGATCTTGGTTTTTGTAAACCAGGTGCTATGATATCCGG
ATCCATAGTCGGAACTCCCATTCATATGGCTCCTGAGTTATTTTCCGGTC
GTTATGATCACTCAGTCGATGTTTATGCTTTCGGTATCTTATTCTGGTAT
ATCTGTGCTGGCAGCGTTCGCTTACCTGGTTCGTACGAGCAGTGTGCCTC
CAAAGATCAGCTCTGGAATTCTGTTCGCAAAGGTGTCCGTCCAGAACGAT
TGGCGCATTTCGATGACGAATGTTGGTCACTTATGGAGCAATGTTGGTCA
GGTGATTCAGCTGCACGCCCCTTGTTGGGAGATATCCAGCCACGTTTGAA
AGCTATCAAAGAAAGAATTGAGATTCGAGACGCCCAAAAACGCCAGTCAC
GCCCTGGTAGTTCACGTTCTCGAAGCTCGTACGCCACGGGTCATCATTCG
CATATTCCATCGAAACACATCATGCAAATTCCTCTGTCGAAACCACATTA
GTGACTTACACCGGAAAATTGGGGTATGACTAGTACGTTTCAGCCCTAAG
TAGTCAACATTGGATGTAACCTGAACCTGTTTTGAATGTATTAATGAAAC
TGAGCTATAAATCAACACACGATGTTTGATTCGTGCAATATCCTTAAAAA
AAGGATAATACTTAGAAATAATCTTTTGGGTTTTTcattcatcttttttt
tcttttttcgtaaaatttaattatttttttatgttgtagtataaaatata
aaatttccaaaaataaaaacgatgattttttgtaacatttttctAATTGA
CATTCGATTTTTCAGggatatttttctttatttcttgaaGACAGTTTTCG
GTAACCTGAGAAAAGTATTGAGTGACATCTTGCGACATTAAACATTTCGG
AATACTCTTTATCGTATTTTAGCCTATAagggacaaaaattaaaatttct
gaCGAATATGGCTGCTGGAGATGATaaatgaatgattttttaaGAAGCGT
TAACCTTACGAGCCGTGTTGGGTAAACTTTCCAAAAGATTATATATAAag
tattaaaatttttataaaatatttgtaGTGGCGTTTTTACCATGCATTTA
TTATAtcgtaatttataaaaatacgctttatatttttttagaaaaaatca
atttaaataactatgaaataaaaactttaagaTCCATTTGGAACTAA
Run BLAST on NCBI

transcript from alignment at scaffold_218:628256..637051+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052599 ID=TCONS_00052599|Name=TCONS_00052599|organism=Clytia hemisphaerica|type=transcript|length=8796bp|location=Sequence derived from alignment at scaffold_218:628256..637051+ (Clytia hemisphaerica)
TCCAAGAGCTGATTTAGAATTACGAGGACGTGATAGAAGTGATCCAGCTC
TGACAGCTGCAGTAGCTGAAGTTTGTTTAGATCACCCGTTGTTAAAGACA
GGAGCTGAAATCATTTGTGCTCCATCAAACACTGAAAATAGTGTAGAGCA
AGTGTTCAAATCATGTGTTGAAGATGTTCTTCCTATTCTTATTTTCGCTG
TTGATACTGAAACACTATGTCAAAAGGTATGGATTTGGTTTCCCCTTCAA
TTAGACCTAAACTGAACTTGCtcgttttctaaaaacaaagctCTTTTTGT
CCATTTGGATTCTCTGCATCAGGAAGCTTCTTAAAACCATAATGGACATG
TAAGGAagggaaaatacatttttaccTTATTTCAGTTTTCAGTTGATATT
TTACACTTATTTGTTTTAGACTACATGCTAGACTTCAGTAGACTTAATCC
CTTTTcttctcctttttctttttgtataaagtaaaaactttttttcagga
tttgGATGAACTTGCACAAATCAATTCATTTGCCATGAATAGTTTACCAG
TGTTTTTCGTTAAAGTTCCTCCCCATTGTACGCACGAGTTGACAGAATCG
TTGCAAGATAGTCTCAAACAAGAACAGGTAGATAAAATGAATGAAGGGNc
actttctattgcaattttagtgaagtcagtcaaaaatcaaatttttgttt
gcgtcatatagccgtgaaatcatgcgtccggaaagggttaagaaTGTTTT
accctaaatttttgaaatttcttaagaatacttgaccctcacccaaagta
cactattcttattaaaaaagcgtgtatatagTGTAGAAAAACTTGTTGAA
AAGAATGCATCAAGCTTAGGTCCTAGGCTGCACACATCTcttctgatatg
ttttgatataaggGATGCTAAAAATCTTAATCTCTAaccattcaaatttt
aaattcaaatttaatgaacTTGAAGATGTCTCATATAAACTAAATCTTAC
TAATCACGCTAATCAAGTTTCTACAACTCGAAAacaaaaagacgggggta
acaCTCGGACaagaatttcatacacgatatgCATCCCCTCTATCATAACA
TCATCAAAGAGGACGTGTGTAGTATAACTTGGGCCATATTCATATATCAC
TGATTGTTTTCTTCTATTTcagattttattcaaaaaatataatgttATGA
GAAGATCTTAATAAAGTTGTTCAAAAATGACTGCAAATTTACCCTACGAA
TTAACCAAATTCAAGGAGCATACAAAGTTGCTCCGTCAAGTGAAAAGAGA
CACTGATAAAGCATTTTATGAGATCCAACAATCAGGACATTTTGCTCCTG
ACTTACTACGAGCTTATCTTCTTCCTCAAGATGAATATCATGAACTTGCA
CATGTTTGTGAAAAACCACCAACCATCATAGTACTTGGAACTTCTTGTTA
TGCTAAGGTACGAGCTATAAATGAACTGTTAGGAGAACCTATTCTTCCAC
TTGCAGAAGATGCTGACTCAGCAAGTGTCACATGGCGTATGGTACGTTTC
AAACATGGATATTATTCTACCTTGAGTCTTGTTTTACCGGACAGTTTTGA
GTTAGCTGCTGCACTTGATGCTTATGAAGGAACATGGAGATCTGTTCCAA
GAGCTGATTTAGAATTACGAGGACGTGATAGAAGTGATCCAGCTCTGACA
GCTGCAGTAGCTGAAGTTTGTTTAGATCACCCGTTGTTAAAGACAGGAGC
TGAAATCATTTGTGCTCCATCAAACACTGAAAATAGTGTGGAGCAAGTGT
TCAAATCATGTGTTGAAGATGTTCTTCCTATTCTTATTTTCGCTGTCGAT
ACTGAAACACTATGTCAAAAGGTATGGATTTGTTTTTCCCCTTCAATTAG
ACCTAAACTGAACTTTGGCCGTCTTCTAAAAACAAAGCTCTTTTTGTCCA
TTGGGATTCTCTGCATCAGGAAGCTTCTTAAAACCATAATGGATATGTAA
GGAagggaaaatacatttttaccTTATTTCAGTTTTCAGTTGATATTTTA
CACTTATTTGTTTTAGACTACATGCTAGACTTCAGTAGACTTAATCCCTT
TTcttctcctttttctttttgtataaagtaaaaactttttttcaggattt
gGATGAACTTGCACAAATCAATTCATTTGCCATGAATAGTTTACCAGTGT
TTTTCGTTAAAGTTCCTCCCCATTGTACGCACGAGTTGACAGAATCGTTG
CAAGATAGTCTCAAACAAGAACAGGTAGATAAAACGAATGAAGGAAACAG
AAAATTATACGAACAATTAGTTGAACTTGGATTTTTGAGCAAAGAAGCTG
CACCAACAGAAACAACTACTACTTCAACAACTGAGCTAGGATCATCGGCA
TCCATTATAGACAGTGTCCGACCAAAAAGTACATTGATCGAAGACTTTTC
TTTATTTCCTTGCTTTCTTATGTTTGTACGTCAAATTTTACAGTATCATA
TCATTGCAGCTGCTTGTGTTTTGAATGAAGCTCATACTCGTTGCCTGGGA
ATGTTTATCAATTCAGCTTTCGATTTAGCCAGAGACATTAGTATTACACC
AAAAAGGATTTCATATGCTCGTGCTAAAGAAGATGAACTATTTCGATCTC
TAATGGATATTGCTAATAAAAAACAAGAAGAGATTAAAGAGGTTATACAT
TCGACGATAGAAAGTTTGAGCCCTCAACTTCAAGAGGAAGCAGGACTATT
AAAAATTCAAGGCGTTGATTTCCAACAGAACTTAGAACTTGTTGATATTG
AAGACCTGGAACGTTGCATACAACAAGTTCAAGAACTTGTATTGAGCCGT
TTAAATCAAGCGGTCGCTGGTAAATTGATTAGCTCTGTAGAATATTTGAA
GGAAAGTTATGTTGGAACCTTGACCAGATGTCTGACAAGTCTGGAAAAAG
CTGATCAAGAATTCGCCAGAGAAACGAGTGGTGTGGCATCAGTGGCTTTG
AAACAGGTTGGTTGTCTCAATATTTtattcactttcttttttatcttcat
ttttctctttatagTAGGGGGGGGGCATTCTTAAAGAATTCGCGACAACA
ATATCCGGAGTGAGATTTTTCTGGCTCATTTAAAAGAAGAACacatttac
aaaatttattgagaGGGGGTAATCAAATAAGacccatcaaatttttttat
gggcTAAAGACTGTCGTCACAAGCAAAAACACTTGGGACCCGAAATTTAA
CTCCGGAAACTGTTGTCACTGGTCCAAAAGAATTGTCTCCTACTGTTATG
GGtatgttattgaaaaattgttttggcATGTGCACTTTTGTGTTTCATTT
ATATGCATGAAATTTTAATGATACCATAAACATTCTGAAAAAAAGATTCA
TAATACATAAACACAATTTNTTTTTCCCCTTCAATTAGACCTAAACTGAA
CTTTGGCCGTCTTCTAAAAACAAAGCTCTTTTTGTCCATTGGGATTCTCT
GCATCAGGAAGCTTCTTAAAACCATAATGGATATGTAAGGAagggaaaat
acatttttaccTTATTTCAGTTTTCAGTTGATATTTTACACTTATTTGTT
TTAGACTACATGCTAGACTTCAGTAGACTTAATCCCTTTTcttctccttt
ttctttttgtataaagtaaaaactttttttcaggatttgGATGAACTTGC
ACAAATCAATTCATTTGCCATGAATAGTTTACCAGTGTTTTTCGTTAAAG
TTCCTCCCCATTGTACGCACGAGTTGACAGAATCGTTGCAAGATAGTCTC
AAACAAGAACAGGTAGATAAAACGAATGAAGGAAACAGAAAATTATACGA
ACAATTAGTTGAACTTGGATTTTTGAGCAAAGAAGCTGCACCAACAGAAA
CAACTACTACTTCAACAACTGAGCTAGGATCATCGGCATCCATTATAGAC
AGTGTCCGACCAAAAAGTACATTGATCGAAGACTTTTCTTTATTTCCTTG
CTTTCTTATGTTTGTACGTCAAATTTTACAGTATCATATCATTGCAGCTG
CTTGTGTTTTGAATGAAGCTCATACTCGTTGCCTGGGAATGTTTATCAAT
TCAGCTTTCGATTTAGCCAGAGACATTAGTATTACACCAAAAAGGATTTC
ATATGCTCGTGCTAAAGAAGATGAACTATTTCGATCTCTAATGGATATTG
CTAATAAAAAACAAGAAGAGATTAAAGAGGTTATACATTCGACGATAGAA
AGTTTGAGCCCTCAACTTCAAGAGGAAGCAGGACTATTAAAAATTCAAGG
CGTTGATTTCCAACAGAACTTAGAACTTGTTGATATTGAAGACCTGGAAC
GTTGCATACAACAAGTTCAAGAACTTGTATTGAGCCGTTTAAATCAAGCG
GTCGCTGGTAAATTGATTAGCTCTGTAGAATATTTGAAGGAAAGTTATGT
TGGAACCTTGACCAGATGTCTGACAAGTCTGGAAAAAGCTGATCAAGAAT
TCGCCAGAGAAACGAGTGGTGTGGCATCAGTGGCTTTGAAACAGGTTGGT
TGTCTCAATATTTtattcactttcttttttatcttcatttttctctttat
agTAGGGGGGGGGCATTCTTAAAGAATTCGCGACAACAATATCCGGAGTG
AGATTTTTCTGGCTCATTTAAAAGAAGAACacatttacaaaatttattga
gaGGGGGTAATCAAATAAGacccatcaaatttttttatgggcTAAAGACT
GTCGTCACAAGCAAAAACACTTGGGACCCGAAATTTAACTCCGGAAACTG
TTGTCACTGGTCCAAAAGAATTGTCTCCTACTGTTATGGGtatgttattg
aaaaattgttttggcATGTGCACTTTTGTGTTTCATTTATATGCATGAAA
TTTTAATGATACCATAAACATTCTGAAAAAAAGATTCATAATACATAAAC
ACAATTTTAACCGGTAATGTCATATAAACATATAAACATACAAAAACTAA
CCATTCATATCTTATACTAATCACCCTTCTTTTTTATCTCTCAGCCTCAG
GTCGTTGTAACTAGACCCAGTTCGCCATACTCATCCTTCTTATTATTAAA
CATTGTTAATGGGACCGGTCCGACACACCCAGCTAACCATCGCCAATCTA
CAGCTTCTTTACACCTCAAGCAGGTACTTTCATGTCTCATTTCTCCATTC
TTCTTGTATTACGCGATGATTATCTGCTTTTACCAATATAGATCATCTAA
CCACCAGGTCTTTTAAATTAACGTCATAATCTTAACCAACAATAGGTGTA
ACATTTAAAGTactgtatttttcaaatttttatctttattgttTTCGAAG
CTCAGGAActtaattgtttgttttttagatTTCAACCTCTTaaaatcagg
gggggggggtcggtaaaatctcagacatatatgaatcctaaaagggtttt
ttgagaattttttgcatACCACCACCCCATTCTAAAGAAGTGGTATTTAC
TACCCATGTACTCAATTTTTAGGGACATTTAGAAATAGAGACCACCCAAT
TTTGGTCTTTACAGGACAAATTTCTTCTTCTCGGGACAATTTTTCTCGAG
AGTACTGATTTTTTGCAACATGATTTTAattatttggaaaaatttataat
tttaaacAGTGCTGCTTAATGATTTGAGCAAACATTAAATACGTTTGACT
GAGTGCAAAATCATTGAacttgggaaatttttttctaaacaagaaaaatt
ttaaatttttttgaaaaatccaaaaattctgaaaaaaatcacgaaaagtT
CTGATCAAGTTTTAAAAAACGATGAAAATCACTAATTTTAGTACCAATTT
ACTATAAAATATTCCCAAATTCTAGGCTGAATACCACCTTTTTTAGTACA
CTatggtactaaaaggatttttgagttttttgggttatttattttattaa
agGATTGAGGTTCAAGGCGCGCCGTGGGTCTCTAAGAACCTATCTTTTTT
ACAAATGCTTGTtgttataattttctttttgtatagttttgttctggggc
ttcccctgactttaaattgaatagttttgtctttcatttgagcattGAGC
TCGCGTGCTCTCTTGCAAAATTCTTTGAATGTCAATCGTTCCAAAATCGT
GAGGTCTTCTGTTGCTCGATAGGATGTTGCTCACACGAAGCGTTCACTCA
ATCGATGCGCGTTTTGGAGAGGGCATTAAACATCACGATGTCCtagattt
tagtactgacccctgttaaaattattatttcttaCTTTCAGGTTTTGGAT
GCGGCCTACCAAGTGGAAGTGACAGTTCAAGCTAGTTTCTCGTTGACACG
TTTGTTATGGGAAAAGTTAAAGCAAGCCGTCCAAATGTTACCTGGAAAGC
GTTCACCAGTCGTCGACGCAACGTGGAAGAAAAAGATCGCTGCCGAAGTT
ATCTTGTGTATCAGTGAATCAAGACTGGCCAAAAACATCTGTTCTCAATT
TCGAACGCGTTTGATTCGCTCACACGAAGCGTTCACTCAATCAATGCGCG
TTTTGGAGATGCGCCATAACGGGCGTATGGAGAAGAAAGAGGAACAGCGA
ATGAAACTGAGAAAGGTGTTCGCACCCCGTGTCGCCCGTTGTGTTTTGGA
CAGCACATCTTTACGTGATTTGGTCTTGTACGGCATGCCTCAACTAGGGC
GTGAAATTGGACGTGGTCAATATGGAGTCGTGTATGCTTGTGATAAATGG
GGTGGTTCTGGTCCATGCGCTATCAAATCAGTTGTGCCGCCTGACGATAA
ACATTGGAACGATCTAGCCTTGGAATTTTATTACACTAGGTGTGTTTTTT
ATACCTATCAGGCTAAAACCTTTGACTTTCTATCAATTCTTAtatttatt
atattttctttATAACATGAATCTTTTCCAAAATGTCATTTAGGATGAAT
gcatttttaatttaaaagttGATCCACAAAAGCTATTGTTGTacaatctt
tcaaaatcttttaaaattcaCTCAGTCACTCATTCTATTAAAgttgttta
tttctttttcaatttcagagCCATACCTGAAAATGATCGCCTAGTACAAA
TACGTGGTTCGGTCATCGATTACAGTTACGCAGGTGGTAGTTCGCCCGCC
GTCCTTCTCGTCATGGATCGGATGCAGAGAGATCTCTACGCAGGTATCAA
GAACGGGATGAGTTTCAGAAGTCGTCTGCAAGTCGCATTAGATGTCGTGG
ATGGATTACGTTACTTACACAGTCAAGGTCTTATTCATCGAGATATCAAA
CTCAAGAATGTTCTGGTGAGTTTTGCCTTTTTCATGTTTATTGGTGCTGT
CTTAAACTTTTAAAGTCTCTTTCTGTATTAAAGATTCTTAAActgtattt
taaaataattttcgacTGTAACAACATTGCTTTTAATTTCTCTCTGTTTT
AAGCACTGGTAATATTGCAGCTTTTGAAGTGTCCAGAAGACTTTTAGAGT
TCGCATTGTAAAAagaattcagcaaaaatttttttttttaccgaccctag
tttttaaaagaaattataattttACTTTCAGCTTGATTCAAAGAACCGTG
GCAAGTTAACAGATCTTGGTTTTTGTAAACCAGGTGCTATGATATCCGGA
TCCATAGTCGGAACTCCCATTCATATGGCTCCTGAGTTATTTTCCGGTCG
TTATGATCACTCAGTCGATGTTTATGCTTTCGGTATCTTATTCTGGTATA
TCTGTGCTGGCAGCGTTCGCTTACCTGGTTCGTACGAGCAGTGTGCCTCC
AAAGATCAGCTCTGGAATTCTGTTCGCAAAGGTGTCCGTCCAGAACGATT
GGCGCATTTCGATGACGAATGTTGGTCACTTATGGAGCAATGTTGGTCAG
GTGATTCAGCTGCACGCCCCTTGTTGGGAGATATCCAGCCACGTTTGAAA
GCTATCAAAGAAAGAATTGAGATTCGAGACGCCCAAAAACGCCAGTCACG
CCCTGGTAGTTCACGTTCTCGAAGCTCGTACGCCACGGGTCATCATTCGC
ATATTCCATCGAAACACATCATGCAAATTCCTCTGTCGAAACCACATTAG
TGACTTACACCGGAAAATTGGGGTATGACTAGTACGTTTCAGCCCTAAGT
AGTCAACATTGGATGTAACCTGAACCTGTTTTGAATGTATTAATGAAACT
GAGCTATAAATCAACACACGATGTTTGATTCGTGCAATATCCTTAAAAAA
AGGATAATACTTAGAAATAATCTTTTGGGTTTTTcattcatctttttttt
cttttttcgtaaaatttaattatttttttatgttgtagtataaaatataa
aatttccaaaaataaaaacgatgattttttgtaacatttttctAATTGAC
ATTCGATTTTTCAGggatatttttctttatttcttgaaGACAGTTTTCGG
TAACCTGAGAAAAGTATTGAGTGACATCTTGCGACATTAAACATTTCGGA
ATACTCTTTATCGTATTTTAGCCTATAagggacaaaaattaaaatttctg
aCGAATATGGCTGCTGGAGATGATaaatgaatgattttttaaGAAGCGTT
AACCTTACGAGCCGTGTTGGGTAAACTTTCCAAAAGATTATATATAAagt
attaaaatttttataaaatatttgtaGTGGCGTTTTTACCATGCATTTAT
TATAtcgtaatttataaaaatacgctttatatttttttagaaaaaatcaa
tttaaataactatgaaataaaaactttaagaTCCATTTGGAACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033254XLOC_033254Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052599-exon-scaffold_218-1491911889:628256..628481TCONS_00052599-exon-scaffold_218-1491911889:628256..628481Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1510915933:628256..628481TCONS_00052599-exon-scaffold_218-1510915933:628256..628481Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1575043694:628256..628481TCONS_00052599-exon-scaffold_218-1575043694:628256..628481Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1491911889:631939..632799TCONS_00052599-exon-scaffold_218-1491911889:631939..632799Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1510915933:631939..632799TCONS_00052599-exon-scaffold_218-1510915933:631939..632799Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1575043694:631939..632799TCONS_00052599-exon-scaffold_218-1575043694:631939..632799Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1491911889:634547..635094TCONS_00052599-exon-scaffold_218-1491911889:634547..635094Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1510915933:634547..635094TCONS_00052599-exon-scaffold_218-1510915933:634547..635094Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1575043694:634547..635094TCONS_00052599-exon-scaffold_218-1575043694:634547..635094Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1491911889:635324..635570TCONS_00052599-exon-scaffold_218-1491911889:635324..635570Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1510915933:635324..635570TCONS_00052599-exon-scaffold_218-1510915933:635324..635570Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1575043694:635324..635570TCONS_00052599-exon-scaffold_218-1575043694:635324..635570Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1491911889:635837..637051TCONS_00052599-exon-scaffold_218-1491911889:635837..637051Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1510915933:635837..637051TCONS_00052599-exon-scaffold_218-1510915933:635837..637051Clytia hemisphaericaexon
TCONS_00052599-exon-scaffold_218-1575043694:635837..637051TCONS_00052599-exon-scaffold_218-1575043694:635837..637051Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:628256..637051 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.16253	1.69197	2.9786	3.10501	13.0867	10.193	2.20501	2.55916	2.05017	5.52449	3.12628	1.73348	1.82301	2.0805	2.52431	4.29477	3.55707	3.73561	1.7405	1.52852	5.93173	4.20095	12.182	9.6386	0.12868	0.260833	2.13871	2.02704	20.2584	17.0007
Blast
[Close]
BLAST of TCONS_00052599 vs. Swiss-Prot (Human)
Match: DUSTY (Dual serine/threonine and tyrosine protein kinase OS=Homo sapiens GN=DSTYK PE=1 SV=2)

HSP 1 Score: 779.245 bits (2011), Expect = 0.000e+0
Identity = 389/756 (51.46%), Postives = 522/756 (69.05%), Query Frame = 2 
Query:    2 PRADLELRGRDRSDPALTAAVAEVCLDHPLLKTGAEIICAPSNTENSVEQVFKSCVEDVLPILIFAVDTETLCQKDLDELAQINSFAMNSLPVFFVKVPPHCTHELTESLQDSLKQEQVDKTNEGNRKLYEQLVELGFLXXXXXXXXXXXXXXXXXXXXXXIIDSVRPKSTLIEDFSLFPCFLMFVRQILQYHIIAAACVLNEAHTRCLGMFINSAFDLARDISITPKRISYARAKEDELFRSLMDIANKKQEEIKEVIHSTIESLSPQLQEEAGLLKIQGVDFQQNLELVDIEDLERCIQQVQELVLSRLNQAVAGKLISSVEYLKESYVGTLTRCLTSLEKADQEFARETSGVASVALKQVLDAAYQVEVTVQASFSLTRLLWEKLKQAVQMLPGKRSPVVDATWKKKIAAEVILCISESRLAKNICSQFRTRLIRSHEAFTQSMRVLEMRHNGRMEKKEEQRMKLRKVFAPRVARCVLDSTSLRDLVLYGMPQLGREIGRGQYGVVYACDKWGGSGPCAIKSVVPPDDKHWNDLALEFYYTRAIPENDRLVQIRGSVIDYSYAGGSSPAVLLVMDRMQRDLYAGIKNGMSFRSRLQVALDVVDGLRYLHSQGLIHRDIKLKNVLLDSKNRGKLTDLGFCKPGAMISGSIVGTPIHMAPELFSGRYDHSVDVYAFGILFWYICAGSVRLPGSYEQCASKDQLWNSVRKGVRPERLAHFDDECWSLMEQCWSGDSAARPLLGDIQPRLKAIKERI 2269
            P  DLE++  +  D A   A  EV + H LL+   +++ AP         V    V D LP++ +A+  + L ++D  EL +I  +   S PVFF KVP     E+ +S    ++ E+          LY QL++LG+LS                          + +S L+E          F  Q+LQ  ++ AA  LN  H  CL +FIN AFD+ RD+ ITPKR+ Y R KE+EL+ SLM+IAN+KQEE+K++I  T+ ++  +L ++A  ++ + V   +N E V   +++ CI+Q+QEL++SRLNQAVA KLISSV+YL+ES+VGTL RCL SLEK+       TS      LKQ+L+AAY VEVT  +  S+TR+LWE++KQ +Q +     P +   WK+K+A E I  +S S+LAK+ICSQFRTRL  SHEAF  S+R LE  H+GR+EK E+  +++RK  APR+AR  L+S SL+D++L+  P+LG+E+GRGQYGVVY CD WGG  PCA+KSVVPPD+KHWNDLALEF+Y R++P+++RLV + GSVIDY+Y GGSS AVLL+M+R+ RDLY G+K G++  +RLQ+ALDVV+G+R+LHSQGL+HRDIKLKNVLLD +NR K+TDLGFCKP AM+SGSIVGTPIHMAPELF+G+YD+SVDVYAFGILFWYIC+GSV+LP ++E+CASKD LWN+VR+G RPERL  FD+ECW LME CW GD   RPLLG +QP L+ I  R+
Sbjct:  188 PEEDLEVQ-ENNEDAAHVLAELEVTMHHALLQE-VDVVVAPCQGLRPTVDVLGDLVNDFLPVITYALHKDELSERDEQELQEIRKYF--SFPVFFFKVPK-LGSEIIDSSTRRMESER--------SPLYRQLIDLGYLSSSHWNCGAPG-------------QDTKAQSMLVEQSEKLRHLSTFSHQVLQTRLVDAAKALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLNTMKEELLDDATNMEFKDVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKLISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNY----LKQILNAAYHVEVTFHSGSSVTRMLWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAFAASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESCSLQDVLLHRKPKLGQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLGIVQPMLQGIMNRL 913
The following BLAST results are available for this feature:
BLAST of TCONS_00052599 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DUSTY0.000e+051.46Dual serine/threonine and tyrosine protein kinase ... [more]
back to top