TCONS_00052501 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00052501
Unique Name	TCONS_00052501
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2478

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_216:51737..56361+
coding sequence from alignment at scaffold_216:51737..56361+

transcript sequence

>TCONS_00052501 ID=TCONS_00052501|Name=TCONS_00052501|organism=Clytia hemisphaerica|type=transcript|length=2478bp
TCAGATTGCGTGAGATAGCTAACCGCTAAATTTGCATAATATAAATTGAC
AAAACCGCTAAACTGATGTTCGCAAAATCGTGATCTTGTTTGAAACAATG
TCAACACTTTCGCGTGCGACCAAATATTATATACTGTATCATACTACGTT
TTATAACATAATAAACGTAatatattacaaaattgttagtGAGTACACTT
TCTCCTTTGACCCTTTACCATCCAACGAAACTGAAAATAGATCGTCTTTA
TTTTCAGAATAAAGTAACGAAATATTATACTGAATATTATACtggtaaaa
acaaagatttagcgATGAAGTCAAGTATAGTTGCGATATCATTGGCGATT
TTTTCAGTTCTCCATACAACCGAAAGTCTCAAATGCTACGGTCTCCGTAC
TAAAAATCCGTCACCGACAAACCTCGGCAAAACAATCGAATGTCCACAAA
ACGTCACACATTGTGTCACAGGTATTGGTACGATTGGACAACGTGGTGAA
AGGAAAGAATTCGAAATGCTTGGACGAGCATGCTTCGCGGCCGACAAAGC
GAAACAATTTTGTACGCGCGGGCGAAATTGTCAGTATATGGTGAAATCTG
ACGGATCGATATTCAAACTTTGTTATCATTGCTGTGAGACGGATTTATGT
AATCATAAAATGCCTGGGAACGAGAAAAATGATTCTGAAGATTCACCTGA
CTCTAACACGCCTGAACAATCTTCAAAGCAGAAAGAAcaagaaaaggaaa
agaaacGAAAGGTTTCCTCTACTGAAGACGAAAAACAAGAAATCAACCGA
ACATCGAAAACCAACGAAAACAAAACGAAAGAGACGAAAAAGTTGGTCGA
AATCACAAGAATTGCTAAACGAAGAATACCGACAATTATTCGTTTGAAAA
CAACAAAGCCACCGGCTATAAGCACAACTACAAAACGAAAATCTACGACA
ATGTTAAAAACAACGACTACGATACCGACAACAGAAAAATTTACCGAAAA
GCAATCAATGACTGTTCAAACACCAACGGAAAGTAAGCCAACGCCAACGA
TCAAAACTTCGCAAAAACCGAAAACAGACGAATTCGAAACGAATAAAATC
ATCGGTAAGAAACATAAGCCGACTTTAAAACTAAACGAAAATACGATACA
CAAGAGAGCGAGAGACTTTAACAACAATTTCGGACAATTTCGAGCTAATA
CAATCGTTCAAAAATCTGAATATAACCTTTCAAAGCAAAACATTTCAATT
AAAGCACTTTCATGTCATAAAGACAAAATGACAGCGTACCTCAACGTCGA
AAACATGCAAAAAGACTTTTACATCATTCTTCGAAATTCAAGCTGCAGAT
ATTTCGTCCGAATTCTAAACATTGTACAAAACACTATCGAAGTCCCGATT
GATTATCATAGCTGTGGTACCATTATGGTCGAAAATGAAGATCACGTGAC
CTATTCTAGCCAGTTATCGTTCGCGAAAGAAGATTTGAGCGTTGAGGAGC
ACGTGTTGACAGTGAAATGCAGCaagaagaaattaaaagctGAACAGACG
GCTGCAGCCATATTAGAAAAAGGTCGAAAGAAGCCATACCAATTATCGCT
TCATTTGTTCAAAAAGTCTACATATTTGGATGAATATTACCCCGATAACA
ACCCGATATCAATACCGAATTATGGATGGGTTTTCAGTGAAGTCAGATTA
GCATCAAAACATGACAATAATGTTCTGAAACATCTGGATTGTCTTTTGAG
AATGAAACAGGGTGAAAAAggagaaagaatcaaagagatattggttattg
aaaatttGAATCCTGTCAACAGGTCAGTTCGCATTATTCACAAGAAGCGA
ACATCAATCAGATTCCGTATTCACTTGAAGCCGTTTACAAACATTAACGA
TAATTTGGAGCTCGTATGTTTCGCACACGCGTCGTGTGACAATAAAGAGA
AACAAGACCAATCTTCAGGTTGTGAAGCAACAAGGCAAGCTGTTACCATG
GAAACAGAATATGTGGCATTGAAACGAGGCAGAATTCAAGTAGTGGAAAC
GAAAGtcACGTCAGGCAAAAAGCAATCCGGATTAATATCTTCAGAGACGA
CGCGCTACATCATTCTAGGATGTGTACTCGGAATGATTTTCATACTCACG
ATTGCATGTGTTGCTATCAACAAACATGGATGGGCTATTCGGATCAATAA
CGATTCAGAAAGCGGAGATAGCCATGACAGTCAACCGGAAAAGTCACCGG
TAAAGAGTGTTACCGCTGTTCTAGAAGCTGAATCACCCGGAACGTCCGGT
CTTCAACGATCAAAGGAGAACACAGCATATAGATTTTCATGACTTGTGAA
CTGAACTCGATACGGTATGGCTGTGTAGAGCTCCACGTAAGGCGAGAATA
TGGAGTCAGAATAAGTATACGAGAGCTGCTGTCAACTGAAATGTTGTGGC
AATAAAGAAATTGTGAGAAACCTAGANN

Run BLAST on NCBI

protein sequence of TCONS_00052501-protein

>TCONS_00052501-protein ID=TCONS_00052501-protein|Name=TCONS_00052501-protein|organism=Clytia hemisphaerica|type=polypeptide|length=675bp
MKSSIVAISLAIFSVLHTTESLKCYGLRTKNPSPTNLGKTIECPQNVTHC
VTGIGTIGQRGERKEFEMLGRACFAADKAKQFCTRGRNCQYMVKSDGSIF
KLCYHCCETDLCNHKMPGNEKNDSEDSPDSNTPEQSSKQKEQEKEKKRKV
SSTEDEKQEINRTSKTNENKTKETKKLVEITRIAKRRIPTIIRLKTTKPP
AISTTTKRKSTTMLKTTTTIPTTEKFTEKQSMTVQTPTESKPTPTIKTSQ
KPKTDEFETNKIIGKKHKPTLKLNENTIHKRARDFNNNFGQFRANTIVQK
SEYNLSKQNISIKALSCHKDKMTAYLNVENMQKDFYIILRNSSCRYFVRI
LNIVQNTIEVPIDYHSCGTIMVENEDHVTYSSQLSFAKEDLSVEEHVLTV
KCSKKKLKAEQTAAAILEKGRKKPYQLSLHLFKKSTYLDEYYPDNNPISI
PNYGWVFSEVRLASKHDNNVLKHLDCLLRMKQGEKGERIKEILVIENLNP
VNRSVRIIHKKRTSIRFRIHLKPFTNINDNLELVCFAHASCDNKEKQDQS
SGCEATRQAVTMETEYVALKRGRIQVVETKVTSGKKQSGLISSETTRYII
LGCVLGMIFILTIACVAINKHGWAIRINNDSESGDSHDSQPEKSPVKSVT
AVLEAESPGTSGLQRSKENTAYRFS

Run BLAST on NCBI

transcript from alignment at scaffold_216:51737..56361+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00052501 ID=TCONS_00052501|Name=TCONS_00052501|organism=Clytia hemisphaerica|type=transcript|length=4625bp|location=Sequence derived from alignment at scaffold_216:51737..56361+ (Clytia hemisphaerica)
TCAGATTGCGTGAGATAGCTAACCGCTAAATTTGCATAATATAAATTGAC
AAAACCGCTAAACTGATGTTCGCAAAATCGTGATCTTGTTTGAAACAATG
TCAACACTTTCGCGTGCGACCAAATATTATATACTGTATCATACTACGTT
TTATAACATAATAAACGTAatatattacaaaattgttagtGAGTACACTT
TCTCCTTTGACCCTTTACCATCCAACGAAACTGAAAATAGATCGTCTTTA
TTTTCAGAATAAAGTAACGAAATATTATACTGAATATTATACtggtaaaa
acaaagatttagcgATGAAGTCAAGTATAGTTGCGATATCATTGGCGATT
TTTTCAGGTATGTATTTCTCATTCACTTAGCTGGTTATTTATTTCATCAG
ATTTTATCAGAAGTATTTTCTTATAGAGCCATTACTTTTCGCAAACTTAG
CTTACTTGAACTTTAATTTCCCCAAGATGTAAAAAGGTTTGTCgattttt
gatttctaaactaccttatcggccctttttacaccggcccttattggcgt
tatttttgggctcgtggcgtaataagggccgacgTAAAAGGGGCCAATAA
GGTATGTTTATtttattgtaaacaaaaattttatcattCCAAATCTTTAA
ACTTCTACAGCCATGATTATTTCTCTCTTTCCAGTTCTCCATACAACCGA
AAGTCTCAAATGCTACGGTCTCCGTACTAAAAATCCGTCACCGACAAACC
TCGGCAAAACAATCGAATGTCCACAAAACGTCACACATTGTGTCACAGGT
ATTGGTACGATTGGACAACGTGGTGAAAGGAAAGAATTCGAAATGCTTGG
ACGAGCATGCTTCGCGGCCGACAAAGCGAAACAATTTTGTACGCGCGGGC
GAAATTGTCAGTATATGGTGAAATCTGACGGATCGATATTCAAACTTTGT
TATCATTGCTGTGAGACGGATTTATGTAATCATAAAATGCCTGGGAACGA
GAAAAATGATTCTGAAGGTATTACCACTGATTTCCAACTATATGGCTGGA
TCGGGTTTCCGGGTTTCCCATATAAAAGGAAGTGTGTTCAGCTAAAGAGC
TAACTAGTCCGCCATcttgtaccttatcggggaaaacttcgtcggggaaa
agtgacgaaattttggacaagtgacgaatattttccccgacgaaaatttt
ccccggccttaatgcatttaccaactaccagcaagtgacgaatttttccc
cgacgaagttttccccgataaggtattctaATCTGGATGTCGAGGTTCAA
AAACCTAGTGTGCAGGACTAGTCGACCATAAAACTGGATACACTTTCACG
GGAAATTTGTAAGCAGTTAAAATTAGCAGTTATCTATTGtgtaaaaataa
tataatatctGTGGTATTAACACTAAGCTCATTAAGAGGTCCGATTTTAA
GGTTGGATGACGTCAAATATATGTATTCATAAGCTTACAGTGTAGGGAAC
aacctcgcgagccagggcgaATCGTTGGCGGTCAGGCGGCAAAAGTGAGG
GTGGGGATGGCCAGACGATAAGCGCCCATCTATAACATCAAAAAGCTTAT
CGCCCTGGGTACGAGGTTGTGTAGGgaattaaaatatttaatatCGGCAT
TCTCTCCTAGAAAATTGTCGTAAAAAATCGACACAAAATGTAACCAAGAT
TAAACTTCTTTTTATCACTGAAAAGATATGTCCAATGGGGCTCAGTTTTA
AGACCGtgaagaaaactttaacgaatGTTTTTTTAGATTCACCTGACTCT
AACACGCCTGAACAATCTTCAAAGCAGAAAGAAcaagaaaaggaaaagaa
acGAAAGGTTTCCTCTACTGAAGACGAAAAACAAGAAATCAACCGAACAT
CGAAAACCAACGAAAACAAAACGAAAGAGACGAAAAAGTTGGTCGAAATC
ACAAGAATTGCTAAACGAAGAATACCGACAATTATTCGTTTGAAAACAAC
AAAGCCACCGGCTATAAGCACAACTACAAAACGAAAATCTACGACAATGT
TAAAAACAACGACTACGATACCGACAACAGAAAAATTTACCGAAAAGCAA
TCAATGACTGTTCAAACACCAACGGAAAGTAAGCCAACGCCAACGATCAA
AACTTCGCAAAAACCGAAAACAGACGAATTCGAAACGAATAAAATCATCG
GTAAGAAACATAAGCCGACTTTAAAACTAAACGAAAATACGATACACAAG
AGAGCGAGAGACTTTAACAACAATTTCGGACAATTTCGAGCTAATACAAT
CGTTCAAAAATCTGAATATAACCTTTCAAAGCAAAACATTTCAATTAAAG
CACTTTCATGTCATAAAGACAAAATGACAGCGTACCTCAACGTCGAAAAC
ATGCAAAAAGACTTTTACATCATTCTTCGAAATTCAAGCTGCAGATATTT
CGTCCGAATTCTAAACATTGTACAAAACACTATCGAAGTCCCGATTGATT
ATCATAGCTGTGGTACCATTATGGTCGAAAATGAAGATCACGTGACCTAT
TCTAGCCAGTTATCGTTCGCGAAAGAAGATTTGAGCGTTGAGGAGCACGT
GTTGACAGTGAAATGCAGCaagaagaaattaaaagctGAACAGACGGCTG
CAGCCATATTAGAAAAAGGTGagcaaaaatctatttttttgttGTAAGAT
TTTTATCGCCAATTGACATGAATCTCAAAGTGATATTTGCGTACtcgttt
tttcttataagaacaaactacacaAGAAATTAAAGCCTTCGATGGCCAat
atatcaagaacaagttaagaaaattctAAGGCTCTGCTCTGCAgattcta
aaacacccgatttctcagaaaaatggacaaaattactcaaaaaaaggcga
aaataggaacatgttaagaacatttttaggcttataaACCTTAGAAAGAA
TATCCGAAGCTTTaaacattttggatgttcttataaaaaaacgtgtaacg
tCAAAAACATCCAAAGTGACTGActgaattcttttgttttattctaTTAG
GTCGAAAGAAGCCATACCAATTATCGCTTCATTTGTTCAAAAAGTCTACA
TATTTGGATGAATATTACCCCGATAACAACCCGATATCAATACCGAATTA
TGGATGGGTTTTCAGTGAAGTCAGATTAGCATCAAAACATGACAATAATG
TTCTGAAACATCTGGATTGTCTTTTGAGAATGAAACAGGGTGAAAAAgga
gaaagaatcaaagagatattggttattgaaaatttgtaagTTCTTCAATA
AATGCCTAAAGTAAGCAATTACCTAGTCCCAGCTCCAGTCcccgaaaatt
cctttttacaaaAGCACAAGGTACAAACTCACGCCCGCAGTCCCCCTTTC
TTCACCATTTCACAGATATGATAAAGTTCATGATTGCAccacttcaaaaa
aaattaaaactgttttttgcaaGTTGTCTAAAAGGTGCTGCAATAAAACT
CATTTATCATCATTCTTATGGCAAAACTATACTAGGCTAAGCTTAATCGA
ATTACTCGATTGGTCTGAAGAAAACACCAGTTTAATTGGTTCAGAAATTT
ATTCTTCTTCAGGAATCCTGTCAACAGGTCAGTTCGCATTATTCACAAGA
AGCGAACATCAATCAGATTCCGTATTCACTTGAAGCCGTTTACAAACATT
AACGATAATTTGGAGCTCGTATGTTTCGCACACGCGTCGTGTGACAATAA
AGAGAAACAAGACCAATCTTCAGGTTGTGAAGCAACAAGGCAAGCTGTTA
CCATGGAAACAGAATATGTGGCATTGAAACGAGGCAGAATTCAAGTAGTG
GAAACGAAAGGTGAGTTGACTAAATCAAGATGGTACAATATTCATAATGT
TCAAGACATTTCTATACGggaacaaaacaacaaaacctTTTACgcatctt
tttataagaacatccacaacttttgaagccttgggatgttcttaactttt
tgagttttgagcttaaaaatgttcttaacatgttcttatttttgagtatt
tttgtccacttCCCTATGAAATTACGTGTTCTAAAgaccgcaaagcctta
aaatgttcttaatatgaaATTCATTAAACCTTCAGCTCGAAGAAAAGCTC
TTTTATTTGAATAcaacaaatttgaaataaaaaacgtttatttctttttc
agtcACGTCAGGCAAAAAGCAATCCGGATTAATATCTTCAGAGACGACGC
GCTACATCATTCTAGGATGTGTACTCGGAATGATTTTCATACTCACGATT
GCATGTGTTGCTATCAACAAACATGGATGGGCTATTCGGATCAATAACGA
TTCAGAAAGCGGAGATAGCCATGACAGTCAACCGGAAAAGTCACCGGTAA
AGAGTGTTACCGCTGTTCTAGAAGCTGAATCACCCGGAACGTCCGGTCTT
CAACGATCAAAGGAGAACACAGCATATAGATTTTCATGACTTGTGAACTG
AACTCGATACGGTATGGCTGTGTAGAGCTCCACGTAAGGCGAGAATATGG
AGTCAGAATAAGTATACGAGAGCTGCTGTCAACTGAAATGTTGTGGCAAT
AAAGAAATTGTGAGAAACCTAGANN

Coding sequence (CDS) from alignment at scaffold_216:51737..56361+

>TCONS_00052501 ID=TCONS_00052501|Name=TCONS_00052501|organism=Clytia hemisphaerica|type=CDS|length=12168bp|location=Sequence derived from alignment at scaffold_216:51737..56361+ (Clytia hemisphaerica)
ATGAAGTCAAGTATAGTTGCGATATCATTGGCGATTTTTTCAGTTCTCCA
TACAACCGAAAGTCTCAAATGCTACGGTCTCCGTACTAAAAATCCGTCAC
CGACAAACCTCGGCAAAACAATCGAATGTCCACAAAACGTCACACATTGT
GTCACAGGTATTGGTACGATTGGACAACGTGGTGAAAGGAAAGAATTCGA
AATGCTTGGACGAGCATGCTTCGCGGCCGACAAAGCGAAACAATTTTGTA
CGCGCGGGCGAAATTGTCAGTATATGGTGAAATCTGACGGATCGATATTC
AAACTTTGTTATCATTGCTGTGAGACGGATTTATGTAATCATAAAATGCC
TGGGAACGAGAAAAATGATTCTGAAGATTCACCTGACTCTAACACGCCTG
AACAATCTTCAAAGCAGAAAGAAcaagaaaaggaaaagaaacGAAAGGTT
TCCTCTACTGAAGACGAAAAACAAGAAATCAACCGAACATCGAAAACCAA
CGAAAACAAAACGAAAGAGACGAAAAAGTTGGTCGAAATCACAAGAATTG
CTAAACGAAGAATACCGACAATTATTCGTTTGAAAACAACAAAGCCACCG
GCTATAAGCACAACTACAAAACGAAAATCTACGACAATGTTAAAAACAAC
GACTACGATACCGACAACAGAAAAATTTACCGAAAAGCAATCAATGACTG
TTCAAACACCAACGGAAAGTAAGCCAACGCCAACGATCAAAACTTCGCAA
AAACCGAAAACAGACGAATTCGAAACGAATAAAATCATCGGTAAGAAACA
TAAGCCGACTTTAAAACTAAACGAAAATACGATACACAAGAGAGCGAGAG
ACTTTAACAACAATTTCGGACAATTTCGAGCTAATACAATCGTTCAAAAA
TCTGAATATAACCTTTCAAAGCAAAACATTTCAATTAAAGCACTTTCATG
TCATAAAGACAAAATGACAGCGTACCTCAACGTCGAAAACATGCAAAAAG
ACTTTTACATCATTCTTCGAAATTCAAGCTGCAGATATTTCGTCCGAATT
CTAAACATTGTACAAAACACTATCGAAGTCCCGATTGATTATCATAGCTG
TGGTACCATTATGGTCGAAAATGAAGATCACGTGACCTATTCTAGCCAGT
TATCGTTCGCGAAAGAAGATTTGAGCGTTGAGGAGCACGTGTTGACAGTG
AAATGCAGCaagaagaaattaaaagctGAACAGACGGCTGCAGCCATATT
AGAAAAAGGTCGAAAGAAGCCATACCAATTATCGCTTCATTTGTTCAAAA
AGTCTACATATTTGGATGAATATTACCCCGATAACAACCCGATATCAATA
CCGAATTATGGATGGGTTTTCAGTGAAGTCAGATTAGCATCAAAACATGA
CAATAATGTTCTGAAACATCTGGATTGTCTTTTGAGAATGAAACAGGGTG
AAAAAggagaaagaatcaaagagatattggttattgaaaatttGAATCCT
GTCAACAGGTCAGTTCGCATTATTCACAAGAAGCGAACATCAATCAGATT
CCGTATTCACTTGAAGCCGTTTACAAACATTAACGATAATTTGGAGCTCG
TATGTTTCGCACACGCGTCGTGTGACAATAAAGAGAAACAAGACCAATCT
TCAGGTTGTGAAGCAACAAGGCAAGCTGTTACCATGGAAACAGAATATGT
GGCATTGAAACGAGGCAGAATTCAAGTAGTGGAAACGAAAGtcACGTCAG
GCAAAAAGCAATCCGGATTAATATCTTCAGAGACGACGCGCTACATCATT
CTAGGATGTGTACTCGGAATGATTTTCATACTCACGATTGCATGTGTTGC
TATCAACAAACATGGATGGGCTATTCGGATCAATAACGATTCAGAAAGCG
GAGATAGCCATGACAGTCAACCGGAAAAGTCACCGGTAAAGAGTGTTACC
GCTGTTCTAGAAGCTGAATCACCCGGAACGTCCGGTCTTCAACGATCAAA
GGAGAACACAGCATATAGATTTTCATGAATGAAGTCAAGTATAGTTGCGA
TATCATTGGCGATTTTTTCAGTTCTCCATACAACCGAAAGTCTCAAATGC
TACGGTCTCCGTACTAAAAATCCGTCACCGACAAACCTCGGCAAAACAAT
CGAATGTCCACAAAACGTCACACATTGTGTCACAGGTATTGGTACGATTG
GACAACGTGGTGAAAGGAAAGAATTCGAAATGCTTGGACGAGCATGCTTC
GCGGCCGACAAAGCGAAACAATTTTGTACGCGCGGGCGAAATTGTCAGTA
TATGGTGAAATCTGACGGATCGATATTCAAACTTTGTTATCATTGCTGTG
AGACGGATTTATGTAATCATAAAATGCCTGGGAACGAGAAAAATGATTCT
GAAGATTCACCTGACTCTAACACGCCTGAACAATCTTCAAAGCAGAAAGA
AcaagaaaaggaaaagaaacGAAAGGTTTCCTCTACTGAAGACGAAAAAC
AAGAAATCAACCGAACATCGAAAACCAACGAAAACAAAACGAAAGAGACG
AAAAAGTTGGTCGAAATCACAAGAATTGCTAAACGAAGAATACCGACAAT
TATTCGTTTGAAAACAACAAAGCCACCGGCTATAAGCACAACTACAAAAC
GAAAATCTACGACAATGTTAAAAACAACGACTACGATACCGACAACAGAA
AAATTTACCGAAAAGCAATCAATGACTGTTCAAACACCAACGGAAAGTAA
GCCAACGCCAACGATCAAAACTTCGCAAAAACCGAAAACAGACGAATTCG
AAACGAATAAAATCATCGGTAAGAAACATAAGCCGACTTTAAAACTAAAC
GAAAATACGATACACAAGAGAGCGAGAGACTTTAACAACAATTTCGGACA
ATTTCGAGCTAATACAATCGTTCAAAAATCTGAATATAACCTTTCAAAGC
AAAACATTTCAATTAAAGCACTTTCATGTCATAAAGACAAAATGACAGCG
TACCTCAACGTCGAAAACATGCAAAAAGACTTTTACATCATTCTTCGAAA
TTCAAGCTGCAGATATTTCGTCCGAATTCTAAACATTGTACAAAACACTA
TCGAAGTCCCGATTGATTATCATAGCTGTGGTACCATTATGGTCGAAAAT
GAAGATCACGTGACCTATTCTAGCCAGTTATCGTTCGCGAAAGAAGATTT
GAGCGTTGAGGAGCACGTGTTGACAGTGAAATGCAGCaagaagaaattaa
aagctGAACAGACGGCTGCAGCCATATTAGAAAAAGGTCGAAAGAAGCCA
TACCAATTATCGCTTCATTTGTTCAAAAAGTCTACATATTTGGATGAATA
TTACCCCGATAACAACCCGATATCAATACCGAATTATGGATGGGTTTTCA
GTGAAGTCAGATTAGCATCAAAACATGACAATAATGTTCTGAAACATCTG
GATTGTCTTTTGAGAATGAAACAGGGTGAAAAAggagaaagaatcaaaga
gatattggttattgaaaatttGAATCCTGTCAACAGGTCAGTTCGCATTA
TTCACAAGAAGCGAACATCAATCAGATTCCGTATTCACTTGAAGCCGTTT
ACAAACATTAACGATAATTTGGAGCTCGTATGTTTCGCACACGCGTCGTG
TGACAATAAAGAGAAACAAGACCAATCTTCAGGTTGTGAAGCAACAAGGC
AAGCTGTTACCATGGAAACAGAATATGTGGCATTGAAACGAGGCAGAATT
CAAGTAGTGGAAACGAAAGtcACGTCAGGCAAAAAGCAATCCGGATTAAT
ATCTTCAGAGACGACGCGCTACATCATTCTAGGATGTGTACTCGGAATGA
TTTTCATACTCACGATTGCATGTGTTGCTATCAACAAACATGGATGGGCT
ATTCGGATCAATAACGATTCAGAAAGCGGAGATAGCCATGACAGTCAACC
GGAAAAGTCACCGGTAAAGAGTGTTACCGCTGTTCTAGAAGCTGAATCAC
CCGGAACGTCCGGTCTTCAACGATCAAAGGAGAACACAGCATATAGATTT
TCATGAATGAAGTCAAGTATAGTTGCGATATCATTGGCGATTTTTTCAGT
TCTCCATACAACCGAAAGTCTCAAATGCTACGGTCTCCGTACTAAAAATC
CGTCACCGACAAACCTCGGCAAAACAATCGAATGTCCACAAAACGTCACA
CATTGTGTCACAGGTATTGGTACGATTGGACAACGTGGTGAAAGGAAAGA
ATTCGAAATGCTTGGACGAGCATGCTTCGCGGCCGACAAAGCGAAACAAT
TTTGTACGCGCGGGCGAAATTGTCAGTATATGGTGAAATCTGACGGATCG
ATATTCAAACTTTGTTATCATTGCTGTGAGACGGATTTATGTAATCATAA
AATGCCTGGGAACGAGAAAAATGATTCTGAAGATTCACCTGACTCTAACA
CGCCTGAACAATCTTCAAAGCAGAAAGAAcaagaaaaggaaaagaaacGA
AAGGTTTCCTCTACTGAAGACGAAAAACAAGAAATCAACCGAACATCGAA
AACCAACGAAAACAAAACGAAAGAGACGAAAAAGTTGGTCGAAATCACAA
GAATTGCTAAACGAAGAATACCGACAATTATTCGTTTGAAAACAACAAAG
CCACCGGCTATAAGCACAACTACAAAACGAAAATCTACGACAATGTTAAA
AACAACGACTACGATACCGACAACAGAAAAATTTACCGAAAAGCAATCAA
TGACTGTTCAAACACCAACGGAAAGTAAGCCAACGCCAACGATCAAAACT
TCGCAAAAACCGAAAACAGACGAATTCGAAACGAATAAAATCATCGGTAA
GAAACATAAGCCGACTTTAAAACTAAACGAAAATACGATACACAAGAGAG
CGAGAGACTTTAACAACAATTTCGGACAATTTCGAGCTAATACAATCGTT
CAAAAATCTGAATATAACCTTTCAAAGCAAAACATTTCAATTAAAGCACT
TTCATGTCATAAAGACAAAATGACAGCGTACCTCAACGTCGAAAACATGC
AAAAAGACTTTTACATCATTCTTCGAAATTCAAGCTGCAGATATTTCGTC
CGAATTCTAAACATTGTACAAAACACTATCGAAGTCCCGATTGATTATCA
TAGCTGTGGTACCATTATGGTCGAAAATGAAGATCACGTGACCTATTCTA
GCCAGTTATCGTTCGCGAAAGAAGATTTGAGCGTTGAGGAGCACGTGTTG
ACAGTGAAATGCAGCaagaagaaattaaaagctGAACAGACGGCTGCAGC
CATATTAGAAAAAGGTCGAAAGAAGCCATACCAATTATCGCTTCATTTGT
TCAAAAAGTCTACATATTTGGATGAATATTACCCCGATAACAACCCGATA
TCAATACCGAATTATGGATGGGTTTTCAGTGAAGTCAGATTAGCATCAAA
ACATGACAATAATGTTCTGAAACATCTGGATTGTCTTTTGAGAATGAAAC
AGGGTGAAAAAggagaaagaatcaaagagatattggttattgaaaatttG
AATCCTGTCAACAGGTCAGTTCGCATTATTCACAAGAAGCGAACATCAAT
CAGATTCCGTATTCACTTGAAGCCGTTTACAAACATTAACGATAATTTGG
AGCTCGTATGTTTCGCACACGCGTCGTGTGACAATAAAGAGAAACAAGAC
CAATCTTCAGGTTGTGAAGCAACAAGGCAAGCTGTTACCATGGAAACAGA
ATATGTGGCATTGAAACGAGGCAGAATTCAAGTAGTGGAAACGAAAGtcA
CGTCAGGCAAAAAGCAATCCGGATTAATATCTTCAGAGACGACGCGCTAC
ATCATTCTAGGATGTGTACTCGGAATGATTTTCATACTCACGATTGCATG
TGTTGCTATCAACAAACATGGATGGGCTATTCGGATCAATAACGATTCAG
AAAGCGGAGATAGCCATGACAGTCAACCGGAAAAGTCACCGGTAAAGAGT
GTTACCGCTGTTCTAGAAGCTGAATCACCCGGAACGTCCGGTCTTCAACG
ATCAAAGGAGAACACAGCATATAGATTTTCATGAATGAAGTCAAGTATAG
TTGCGATATCATTGGCGATTTTTTCAGTTCTCCATACAACCGAAAGTCTC
AAATGCTACGGTCTCCGTACTAAAAATCCGTCACCGACAAACCTCGGCAA
AACAATCGAATGTCCACAAAACGTCACACATTGTGTCACAGGTATTGGTA
CGATTGGACAACGTGGTGAAAGGAAAGAATTCGAAATGCTTGGACGAGCA
TGCTTCGCGGCCGACAAAGCGAAACAATTTTGTACGCGCGGGCGAAATTG
TCAGTATATGGTGAAATCTGACGGATCGATATTCAAACTTTGTTATCATT
GCTGTGAGACGGATTTATGTAATCATAAAATGCCTGGGAACGAGAAAAAT
GATTCTGAAGATTCACCTGACTCTAACACGCCTGAACAATCTTCAAAGCA
GAAAGAAcaagaaaaggaaaagaaacGAAAGGTTTCCTCTACTGAAGACG
AAAAACAAGAAATCAACCGAACATCGAAAACCAACGAAAACAAAACGAAA
GAGACGAAAAAGTTGGTCGAAATCACAAGAATTGCTAAACGAAGAATACC
GACAATTATTCGTTTGAAAACAACAAAGCCACCGGCTATAAGCACAACTA
CAAAACGAAAATCTACGACAATGTTAAAAACAACGACTACGATACCGACA
ACAGAAAAATTTACCGAAAAGCAATCAATGACTGTTCAAACACCAACGGA
AAGTAAGCCAACGCCAACGATCAAAACTTCGCAAAAACCGAAAACAGACG
AATTCGAAACGAATAAAATCATCGGTAAGAAACATAAGCCGACTTTAAAA
CTAAACGAAAATACGATACACAAGAGAGCGAGAGACTTTAACAACAATTT
CGGACAATTTCGAGCTAATACAATCGTTCAAAAATCTGAATATAACCTTT
CAAAGCAAAACATTTCAATTAAAGCACTTTCATGTCATAAAGACAAAATG
ACAGCGTACCTCAACGTCGAAAACATGCAAAAAGACTTTTACATCATTCT
TCGAAATTCAAGCTGCAGATATTTCGTCCGAATTCTAAACATTGTACAAA
ACACTATCGAAGTCCCGATTGATTATCATAGCTGTGGTACCATTATGGTC
GAAAATGAAGATCACGTGACCTATTCTAGCCAGTTATCGTTCGCGAAAGA
AGATTTGAGCGTTGAGGAGCACGTGTTGACAGTGAAATGCAGCaagaaga
aattaaaagctGAACAGACGGCTGCAGCCATATTAGAAAAAGGTCGAAAG
AAGCCATACCAATTATCGCTTCATTTGTTCAAAAAGTCTACATATTTGGA
TGAATATTACCCCGATAACAACCCGATATCAATACCGAATTATGGATGGG
TTTTCAGTGAAGTCAGATTAGCATCAAAACATGACAATAATGTTCTGAAA
CATCTGGATTGTCTTTTGAGAATGAAACAGGGTGAAAAAggagaaagaat
caaagagatattggttattgaaaatttGAATCCTGTCAACAGGTCAGTTC
GCATTATTCACAAGAAGCGAACATCAATCAGATTCCGTATTCACTTGAAG
CCGTTTACAAACATTAACGATAATTTGGAGCTCGTATGTTTCGCACACGC
GTCGTGTGACAATAAAGAGAAACAAGACCAATCTTCAGGTTGTGAAGCAA
CAAGGCAAGCTGTTACCATGGAAACAGAATATGTGGCATTGAAACGAGGC
AGAATTCAAGTAGTGGAAACGAAAGtcACGTCAGGCAAAAAGCAATCCGG
ATTAATATCTTCAGAGACGACGCGCTACATCATTCTAGGATGTGTACTCG
GAATGATTTTCATACTCACGATTGCATGTGTTGCTATCAACAAACATGGA
TGGGCTATTCGGATCAATAACGATTCAGAAAGCGGAGATAGCCATGACAG
TCAACCGGAAAAGTCACCGGTAAAGAGTGTTACCGCTGTTCTAGAAGCTG
AATCACCCGGAACGTCCGGTCTTCAACGATCAAAGGAGAACACAGCATAT
AGATTTTCATGAATGAAGTCAAGTATAGTTGCGATATCATTGGCGATTTT
TTCAGTTCTCCATACAACCGAAAGTCTCAAATGCTACGGTCTCCGTACTA
AAAATCCGTCACCGACAAACCTCGGCAAAACAATCGAATGTCCACAAAAC
GTCACACATTGTGTCACAGGTATTGGTACGATTGGACAACGTGGTGAAAG
GAAAGAATTCGAAATGCTTGGACGAGCATGCTTCGCGGCCGACAAAGCGA
AACAATTTTGTACGCGCGGGCGAAATTGTCAGTATATGGTGAAATCTGAC
GGATCGATATTCAAACTTTGTTATCATTGCTGTGAGACGGATTTATGTAA
TCATAAAATGCCTGGGAACGAGAAAAATGATTCTGAAGATTCACCTGACT
CTAACACGCCTGAACAATCTTCAAAGCAGAAAGAAcaagaaaaggaaaag
aaacGAAAGGTTTCCTCTACTGAAGACGAAAAACAAGAAATCAACCGAAC
ATCGAAAACCAACGAAAACAAAACGAAAGAGACGAAAAAGTTGGTCGAAA
TCACAAGAATTGCTAAACGAAGAATACCGACAATTATTCGTTTGAAAACA
ACAAAGCCACCGGCTATAAGCACAACTACAAAACGAAAATCTACGACAAT
GTTAAAAACAACGACTACGATACCGACAACAGAAAAATTTACCGAAAAGC
AATCAATGACTGTTCAAACACCAACGGAAAGTAAGCCAACGCCAACGATC
AAAACTTCGCAAAAACCGAAAACAGACGAATTCGAAACGAATAAAATCAT
CGGTAAGAAACATAAGCCGACTTTAAAACTAAACGAAAATACGATACACA
AGAGAGCGAGAGACTTTAACAACAATTTCGGACAATTTCGAGCTAATACA
ATCGTTCAAAAATCTGAATATAACCTTTCAAAGCAAAACATTTCAATTAA
AGCACTTTCATGTCATAAAGACAAAATGACAGCGTACCTCAACGTCGAAA
ACATGCAAAAAGACTTTTACATCATTCTTCGAAATTCAAGCTGCAGATAT
TTCGTCCGAATTCTAAACATTGTACAAAACACTATCGAAGTCCCGATTGA
TTATCATAGCTGTGGTACCATTATGGTCGAAAATGAAGATCACGTGACCT
ATTCTAGCCAGTTATCGTTCGCGAAAGAAGATTTGAGCGTTGAGGAGCAC
GTGTTGACAGTGAAATGCAGCaagaagaaattaaaagctGAACAGACGGC
TGCAGCCATATTAGAAAAAGGTCGAAAGAAGCCATACCAATTATCGCTTC
ATTTGTTCAAAAAGTCTACATATTTGGATGAATATTACCCCGATAACAAC
CCGATATCAATACCGAATTATGGATGGGTTTTCAGTGAAGTCAGATTAGC
ATCAAAACATGACAATAATGTTCTGAAACATCTGGATTGTCTTTTGAGAA
TGAAACAGGGTGAAAAAggagaaagaatcaaagagatattggttattgaa
aatttGAATCCTGTCAACAGGTCAGTTCGCATTATTCACAAGAAGCGAAC
ATCAATCAGATTCCGTATTCACTTGAAGCCGTTTACAAACATTAACGATA
ATTTGGAGCTCGTATGTTTCGCACACGCGTCGTGTGACAATAAAGAGAAA
CAAGACCAATCTTCAGGTTGTGAAGCAACAAGGCAAGCTGTTACCATGGA
AACAGAATATGTGGCATTGAAACGAGGCAGAATTCAAGTAGTGGAAACGA
AAGtcACGTCAGGCAAAAAGCAATCCGGATTAATATCTTCAGAGACGACG
CGCTACATCATTCTAGGATGTGTACTCGGAATGATTTTCATACTCACGAT
TGCATGTGTTGCTATCAACAAACATGGATGGGCTATTCGGATCAATAACG
ATTCAGAAAGCGGAGATAGCCATGACAGTCAACCGGAAAAGTCACCGGTA
AAGAGTGTTACCGCTGTTCTAGAAGCTGAATCACCCGGAACGTCCGGTCT
TCAACGATCAAAGGAGAACACAGCATATAGATTTTCATGAATGAAGTCAA
GTATAGTTGCGATATCATTGGCGATTTTTTCAGTTCTCCATACAACCGAA
AGTCTCAAATGCTACGGTCTCCGTACTAAAAATCCGTCACCGACAAACCT
CGGCAAAACAATCGAATGTCCACAAAACGTCACACATTGTGTCACAGGTA
TTGGTACGATTGGACAACGTGGTGAAAGGAAAGAATTCGAAATGCTTGGA
CGAGCATGCTTCGCGGCCGACAAAGCGAAACAATTTTGTACGCGCGGGCG
AAATTGTCAGTATATGGTGAAATCTGACGGATCGATATTCAAACTTTGTT
ATCATTGCTGTGAGACGGATTTATGTAATCATAAAATGCCTGGGAACGAG
AAAAATGATTCTGAAGATTCACCTGACTCTAACACGCCTGAACAATCTTC
AAAGCAGAAAGAAcaagaaaaggaaaagaaacGAAAGGTTTCCTCTACTG
AAGACGAAAAACAAGAAATCAACCGAACATCGAAAACCAACGAAAACAAA
ACGAAAGAGACGAAAAAGTTGGTCGAAATCACAAGAATTGCTAAACGAAG
AATACCGACAATTATTCGTTTGAAAACAACAAAGCCACCGGCTATAAGCA
CAACTACAAAACGAAAATCTACGACAATGTTAAAAACAACGACTACGATA
CCGACAACAGAAAAATTTACCGAAAAGCAATCAATGACTGTTCAAACACC
AACGGAAAGTAAGCCAACGCCAACGATCAAAACTTCGCAAAAACCGAAAA
CAGACGAATTCGAAACGAATAAAATCATCGGTAAGAAACATAAGCCGACT
TTAAAACTAAACGAAAATACGATACACAAGAGAGCGAGAGACTTTAACAA
CAATTTCGGACAATTTCGAGCTAATACAATCGTTCAAAAATCTGAATATA
ACCTTTCAAAGCAAAACATTTCAATTAAAGCACTTTCATGTCATAAAGAC
AAAATGACAGCGTACCTCAACGTCGAAAACATGCAAAAAGACTTTTACAT
CATTCTTCGAAATTCAAGCTGCAGATATTTCGTCCGAATTCTAAACATTG
TACAAAACACTATCGAAGTCCCGATTGATTATCATAGCTGTGGTACCATT
ATGGTCGAAAATGAAGATCACGTGACCTATTCTAGCCAGTTATCGTTCGC
GAAAGAAGATTTGAGCGTTGAGGAGCACGTGTTGACAGTGAAATGCAGCa
agaagaaattaaaagctGAACAGACGGCTGCAGCCATATTAGAAAAAGGT
CGAAAGAAGCCATACCAATTATCGCTTCATTTGTTCAAAAAGTCTACATA
TTTGGATGAATATTACCCCGATAACAACCCGATATCAATACCGAATTATG
GATGGGTTTTCAGTGAAGTCAGATTAGCATCAAAACATGACAATAATGTT
CTGAAACATCTGGATTGTCTTTTGAGAATGAAACAGGGTGAAAAAggaga
aagaatcaaagagatattggttattgaaaatttGAATCCTGTCAACAGGT
CAGTTCGCATTATTCACAAGAAGCGAACATCAATCAGATTCCGTATTCAC
TTGAAGCCGTTTACAAACATTAACGATAATTTGGAGCTCGTATGTTTCGC
ACACGCGTCGTGTGACAATAAAGAGAAACAAGACCAATCTTCAGGTTGTG
AAGCAACAAGGCAAGCTGTTACCATGGAAACAGAATATGTGGCATTGAAA
CGAGGCAGAATTCAAGTAGTGGAAACGAAAGtcACGTCAGGCAAAAAGCA
ATCCGGATTAATATCTTCAGAGACGACGCGCTACATCATTCTAGGATGTG
TACTCGGAATGATTTTCATACTCACGATTGCATGTGTTGCTATCAACAAA
CATGGATGGGCTATTCGGATCAATAACGATTCAGAAAGCGGAGATAGCCA
TGACAGTCAACCGGAAAAGTCACCGGTAAAGAGTGTTACCGCTGTTCTAG
AAGCTGAATCACCCGGAACGTCCGGTCTTCAACGATCAAAGGAGAACACA
GCATATAGATTTTCATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033198	XLOC_033198	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00052501-protein	TCONS_00052501-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_216	supercontig	scaffold_216:51737..56361 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0156358	0.0152474	0	0.0346406	0	0	0.0201024	0.0752783	0.105408	0.0816032	0	0.0624803	1.86141	1.34992	0.0355142	0.104809	35.4246	81.8217	0.831063	0.539181	16.584	16.9009	3.49591	2.37964	4.91874	5.39369	0.0214399	0.0686436	0.0173546	0.0176816

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001507	ZP_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00052501 vs. Swiss-Prot (Human)

BLAST of TCONS_00052501 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00052501 (transcript) - C. hemisphaerica