TCONS_00052444 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00052444
Unique Name	TCONS_00052444
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1569

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_214:35055..44720+
coding sequence from alignment at scaffold_214:35055..44720+

transcript sequence

>TCONS_00052444 ID=TCONS_00052444|Name=TCONS_00052444|organism=Clytia hemisphaerica|type=transcript|length=1569bp
AGGAAACGCCTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCAGG
AAACCCAATCAAATGGAGATGGCGAAAATAGACCAGGTCGCTCTCAGTCA
ACAACAAAAGTGGAATTTCAGGTTAATGAGCGAAAAGAAGATCGAGAAGC
AAGCGAATCATTTGACCCAACGAAGCTACGCGACCCTGAAAACGTTTTTA
AGTCGCAGCCACAGACgagtgaaaatgaagaagtcGTGAAAGAACTGTCC
ACTACATACACCTATATGAAAGGGAAATGTGGACATTCTTTCGAAAGCTT
TTTAAAACCACGAATCTTTTATTTCACCAAAGCTTTCACACCTTTATTTA
CTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAATGAG
AGAAAGGAGGACGAAGTTGTGGTATTGTGCGAAGATATCTGTCAAGTAAA
AATGGTTCAGTATGCCCTGGAAAGGATACACAAGCATCCAATTGCATACG
CACCTTACCTTACCGGAGAATATCCTCACGACATCCACAAGATGAaggaa
aaattcgtcaaaaatttgGACGAGATGGAGACAGTTCTGATATCCGATTA
TCGGTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGGATC
CAGAAAACGAGGCCAAAGCACATTTTCTCGTCGAAGCAATCACACGAACC
ATAACAAATCTTGATGTCATTTCAAcgaaacctttttcaaaaaatgcttc
CACGAGTATCgaaagagcttttcaaaaatatgtcgATGGGACTTTAGCAA
TCAAGACACACGTTGAATCGAGCAAAGACGCAGAAGATCTTCTGAAAGTA
CAATTCCAATACAAAGAAAAGGACggctcaaaacaaacaaaaattatttc
acagaAATTGACCGATTTCAGTTTCGACGTTTCACAATCTCTAgatgatt
ttaacaaaaatgaagAGCTATGGCAAAACCATTTCAGGATGGCGTTTACT
CTTTCAACTTCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAAAAC
CATGAGAAGTGTGACCTTGAATGATGGAACTACGCTCAGTTTTCATGatg
ttcggaaaattttgaaggaaaagaaattcgcgaaattcgaagaaattttC
CAACAAAATCCGAACATCATCAACTCGTTGCGTAGTGGTTATGATGATCG
GACACTTCTCATGGAGGCTGTTAATGTAGATCGTTTCGACGTTTTCGTTC
ACTTGATGAATTATCCTCAAGATTTTTCACTCGTGAACAATGTTGGTTGG
AACGTTCTTCATCTTGTTGGTCGTTATGGAAAAGTTCGTTATTCGGAAAA
GTTTGATCAACAAACAATCGAAAAGTTGATCAATGGAAGAGACGATCGCA
ACTTCACACCATTGCATTGGGCAGCACGTTGGAACaaacatgacgtcatc
agatggtTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAATGATGCTGG
TCGACGCCCTGATGAACATTATCGATGTGATGGTGTTACCAAAGAAATCA
TTCGATCGTTTCGTTCGTC

Run BLAST on NCBI

protein sequence of TCONS_00052444-protein

>TCONS_00052444-protein ID=TCONS_00052444-protein|Name=TCONS_00052444-protein|organism=Clytia hemisphaerica|type=polypeptide|length=522bp
GNALLTKDESNKAIIQETQSNGDGENRPGRSQSTTKVEFQVNERKEDREA
SESFDPTKLRDPENVFKSQPQTSENEEVVKELSTTYTYMKGKCGHSFESF
LKPRIFYFTKAFTPLFTWFLPILAATLQFCLNERKEDEVVVLCEDICQVK
MVQYALERIHKHPIAYAPYLTGEYPHDIHKMKEKFVKNLDEMETVLISDY
RSVRGLEMAHTIIFVDPENEAKAHFLVEAITRTITNLDVISTKPFSKNAS
TSIERAFQKYVDGTLAIKTHVESSKDAEDLLKVQFQYKEKDGSKQTKIIS
QKLTDFSFDVSQSLDDFNKNEELWQNHFRMAFTLSTSISSLGTNKWDGKT
MRSVTLNDGTTLSFHDVRKILKEKKFAKFEEIFQQNPNIINSLRSGYDDR
TLLMEAVNVDRFDVFVHLMNYPQDFSLVNNVGWNVLHLVGRYGKVRYSEK
FDQQTIEKLINGRDDRNFTPLHWAARWNKHDVIRWLLAKGADHELKNDAG
RRPDEHYRCDGVTKEIIRSFRS

Run BLAST on NCBI

transcript from alignment at scaffold_214:35055..44720+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00052444 ID=TCONS_00052444|Name=TCONS_00052444|organism=Clytia hemisphaerica|type=transcript|length=9666bp|location=Sequence derived from alignment at scaffold_214:35055..44720+ (Clytia hemisphaerica)
AGGAAACGCCTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCAGG
AAACCCAATCAAATGGAGATGGCGAAAATAGACCAGGTCGCTCTCAGTCA
ACAACAAAAGTGGAATTTCAGGTTAATGAGGTAATTTTGTTAACGAGTGC
ACTGTGTAAATAGCTTACCATTGAAATTGAATAACGAAGCTAGTTTTTCT
TTGTCAGAACCGatcatctttttagaaattctTTCTACAGATTCTGTTTT
TCCAGACTAGAACTGgttaactttttgtgttgggtATTACaacttatttt
tgaaattccgtTCAAATGATCTGATTCGGATGTAATTTTAACTTGTGAAA
TAAACGTGCTCTCCTTGGCAACATACCCCCCTCTTACAGACCCGCTAGCA
GGATCTTTCAGGCAGTTGGGGTTATAAAGGACCAGAATTCAATTGGGAAG
ATTGATATATCCATGTTTTTGAGCCAGAAAACTCAATAGGGatagaaaaa
atagcacaatattttctagagtataattttccactggggactatattttc
atcaattatttttcaatatgaAGGGGTCCTACTTGGTCTGTGAGAAGTGA
CTGATtgccattgatttcaaagccttGAAGAGGCGAATTCTCAAACTCCT
GGTTGGGAAATtaagccacttattttccattCAGAACACATGCCCGTGTG
TTTTTaaaactaaatttaaaaatgcacggcaaacttaaggcttcactttt
tcttgcttaaaaaaggTAGAAGATTCTTCTCTAGCACCTTCGTACGATGG
CTCAGAAGGCTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATGAGTTGATGTTAATAGCGAAATCATTTGTGGTTT
GACGAGTTGTAAATCTGGTCTGTGATTTATATATAACAACATTTTTTTGG
CGCGTGAATGCTCACCAGAAGCAATTTGAAGGAATAAAAAATCCATGGAA
TTTTTGGTTTTGTAGCAAacaaaatcttgaatttcattTACTTTTTAAAC
ATCTAGCACTGAAGATGGTTTtaccgaaaagcttttgctgaaaataaaga
taaaacttgttctttttctttatttctttatgGAATGGCTGATTTAAACA
TAAATCTAAAGAAATACCAGGAAGTAAAGGGTACAGGACCTCTTAGATTT
TGGTGCTTTCTTTGCTTTGTTTCATTGAGTATACAATTGGTACTACTTTG
AGGGAGGGGGTGGGTGGGAAAGGTGGATgcaaaaaacaaagttgatattt
ggtCACTTTTTGCTTCCCCGATTTAAGCCCGAAAATTCCCCGATTTTTGC
CACTCGGGGAAAACTTTGCCGACCAGCACTTAACTCGgaaattttgattc
attttgcccaactcgacattcattttaaagaccaaaaaaaatttcgtttC
GCTGGCCGCTCGCTTGTAAATTACCCGCCGTGGCAACAAgttagaagtgc
gcagtgtcgagccttctgggccattgaccctagacagttctagttcacta
attttataagaactggaagtgcgtggtgagccttaggggTCATCGTACCT
TTGGGGCTTCAACCTGAGTTCCACCACTTTACCAACTACAGAAGAAAAGC
AAGCAGtggttttttaaattcttttttatttagtttttggacctaccccg
ggggggtggaggtcctataaattaacctttgccCGTTCatccgttcgtta
ccaacttttcttagggttgaatcataggaatcttttgatttttagtacaa
aggtgcaaaatggtggtggccaaaatgtgactgagctcgattttcgaaaa
aagatatttttgagtcaaaaaacggctaaaaacgggtttttttgacTATG
Tctatgtgaaaaattggatcattaattttttctgattttttgcatgaaag
taggtaaaaaatggctcaagcagatttttgcaaaaaaaaattggctggcT
CAAAAAACGNATTTCGTTTTGGGAAAAATATTGGAAACTACTAATTTCTA
TATGATTTCATCTCCAGGAAACCATGgtgaaattttcacatttttcccAG
TGTTCATGTTCAgattcatgttgtttcttccgattctgagcgggcTGCCG
CGGTTAAAAATGTTCGCGCGCACCTAATACACTCATttcgttttataagc
ataacgtttataagcatactgaagctcaaatttccagaaaaattaagcat
atgctatgcataccttgaggctcagccGNGTAGAgtgcgatggtttgagt
tttctggaaacctgtgcatttttctgatagtggattgtttttataaagaa
aagcgtttaataacttttttacttatttctcaaaaatctatttcaatagt
gttgatagtttctcccaatagatatgctttcatttttctttatttttctg
taTTTTGACTAGTTAtttcttatgtgtttcattgtttaaatgttcattga
ttagttggataaccaggtaggtccataatagtattacttgtttttttttc
caattaaagggataatccaatactacgcaaatcaaaatattatggtcacG
TGTCTGGAATTTGNGattaaagggataatccaatactacgcaaatcaaaa
tattatggtcacgtgtctggaatttgattggtcgagcgcggtaaaagttt
acaatttgattggtcgaacgggattttcactttcgttttcgtaatctaaa
caaaccgaaaaatactttgtgacataaaaaagttcgaagttgggagggga
atgaaaaatctttcgtgtAATTTCTTCTGTCTTGTATCATACTTTTATAT
AtgaaggaaattttctgttttgctatgccaaaattgattcacaAATGTAA
ATACTACACAAGAGTTTTCTATACACAAAGAGATTGTNCTTATTTCCCAA
TCAAAACACGTAACCCGTgtgtttttcaaataaaatttaaaagtgcacgg
caaacttaaggcttcactttttcttgctttaaaaGGTAGAAGATTCTTCG
GATCCGATGCTTCTCTAGCGCCTTCGTACGATGACCCAGAAGGCTCCAAA
CACGCACTTCTAGTTTTCACatacttccagttcttataaaatttgtgtaC
TAGAACTTTCTTAggtcaatggcccagaaggctcaagtgacactgcgcac
ttctgactTGTTATAACAGCGTGAAATTTCCAAGCAAGCGGCCCGCgcaa
tgaaattttgttttttttggtctttaaaatgaatgtcgaATTACGCAAAG
TAAATCAAAATTTCCGAGTTGTTCATATCAAGAGTTACAGGTTAAAATTT
CCGATTTAAGTGCTGGTCAGCAAAATTTTCACCCAGTGGTAAAAATCTCG
AAATTTTCGGGCTTAAATCGGGGAAGCAAAAAGtgatagaatatcaactt
tgttttttgcATCCACCTTTTCCACCCCTTCCCTCAAAGTGGAACTAATA
GAAATGAAACCAATAGTtaggcaaagaaaaataaagcacCAAAATCTAAG
AGGTTCCGTACCATTTACTTCCTGGTATTTCTTCAGATTTGTTTGCTACA
AAACCAAAAATTCCAtagattttttaattcttcAAATTGCTTCTGGTGAG
CATTTACGCGTCAAAATAATGTTGTTATATATAAATCACAGACCAGATTT
ACAACTCGTCAAACCACAAATGATTTCGTTATTATCATCAGCTCATTTAT
TACAACTCATTATttattttgctgaccagaacgGCTCTCTTTAGAGGGGG
AATTTGcgtatctaaaatatttttagaagtgtgcagtgtcgtcacaaaaa
aactcggaagtgcgcagtgtctcgTGAGCCTCctgggccatgaccctaga
cagttctttttcacaaattttataagaactggaagtgcgtggtgagcctt
aggggccatcgAGGCTTCAAACTGAGTTTCACCACTTTACCAACTACAGA
AGAAAAACAAGCCGTGACTTTTCTTAATTCAATTTCTACAATTAAACCTT
ACCTTTATGTTTTaacgagaaatttcaaattacttCCCTTTTATTAGCGA
AAAGAAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGA
CCCTGAAAACGTTTTTAAGTCGCAGCCACAGACgagtgaaaatgaagaag
tcGTGAAAGAACTGTCCACTACATACACCTATATGAAAGGGAAATGTGGA
CATTCTTTCGAAAGCTTTTTAAAACCACGAATCTTTTATTTCACCAAAGC
TTTCACACCTTTATTTACTTGGTTCCTTCCGATACTAGCTGCAACCCTCC
AGTTCTGTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAA
GATATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAA
GCATCCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCACGACA
TCCACAAGATGAaggaaaaattcgtcaaaaatttgGACGAGATGGAGACA
GTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGGAAATGGCTCATAC
AATCATCTTTGTGGATCCAGAAAACGAGGCCAAAGCACATTTTCTCGTCG
AAGCAATCACACGAACCATAACAAATCTTGATGTCATTTCAAcgaaacct
ttttcaaaaaatgcttcCACGAGTATCgaaagagcttttcaaaaatatgt
cgATGGGACTTTAGCAATCAAGACACACGTTGAATCGAGCAAAGACGCAG
AAGATCTTCTGAAAGTACAATTCCAATACAAAGAAAAGGACggctcaaaa
caaacaaaaattatttcacagaAATTGACCGATTTCAGTTTCGACGTTTC
ACAATCTCTAgatgattttaacaaaaatgaagAGCTATGGCAAAACCATT
TCAGGTATAatttttctgttgaaattttcgattttcaataATCTTTATTA
TTGCAAAAAGCTCAATGAGAGGATATAAgtcatattttccaaaattaggt
GCCCGCTAATCCTTTAACCAAATATATTCCAGACTAAAAANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGC
GTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACGTAAGTCAATACAG
TTGATGCCCTCTGATTCGGCATTCtgttattcgataagctcccattATCA
ATCAACTAACAGTCATTTGACaaatttcctttaaatttcACATAAAAGAT
ACTTTTTTATCGGACATTCTATCGCTATCATCTCCCTGGGGTTGGGGTAT
TTTAAGATTCATGAtttaacgatttacgatgcacgattcacGATCCATGT
TCCATGCATAAATTATGCTGATTTATGCGTAATCATGCTAACCATGATAT
TTTGGCAATTTACAAAGTTTCATTCGCAGAAACCAACGacaaactcaatt
atttttaaaagcaTGATTCATGTTAGATTATGCAAATTATATTCAACGAA
GCTTTCATCGCATCGcattacttcgtacattacggtccgcaaaccatggT
GCCGAATATTGTTCATCagtatattgtgtagtctaagtaaaAGCCTTGAT
TAGTTGTAGCTTTATCGCTTACTTATTAGTTTTTTACATAAATTTGCCGT
CGTAAACAAAAACGAGAAAAGATTACGCCATTGTTTTGGAAATGTGttac
ataatttaagttttatgtaaatactttatgcatggatcgcgaatcgtgca
tcgtaaatcgttagatcgtccATCTTAAATTGCACCAACCCGTCTCCCTG
GGAAAGTTTAGATTTCTAGCATATGAAAGGGTTTTTGAGTAATAGAGTAT
GAACTTTAGACCATCCTATCCTCAACACAATGTCACAACAAAAGGAATAT
CTTATCGTCTAATGTtaggcttacgccaattagggccgttaataacgcca
aaatttataaaaatggctacttatgcctcaaattaataaataatgactaa
aatttacattaaaatgtcattttcagtagtaaactgttgaaaattccatc
gaaaattactgatttttaaatatattaaatatttcactgaagttttaaat
atggagtaaaacaatcgATAATTTTCATCTTCGAATCacacctaaaatcc
tttaaattgagaaataatgataaaaaattaacgccgcttttaggttaaaa
ttgcaaaatcttggcccttttacaccggcccttttaACACCGGTCGCCAT
TACGCCACGagaccaaaaataacgccaataagggccggtgtaaaaagggc
cgatagcGCAATTCGGAAGGcagataaatttgaaaacggagTTTAGTTCG
GGGGGGGTTCGACATTCTTGAAAGATTCCCTATAAAGACCGAATATTCTG
TTTCCTCGATTTTGCAATACTATATAAACTTCAAGTGTAGAAAAAGCTAC
TCTCGTTAGCAATGGAATGTAGTATTTCAATCtccataatttttgttttt
gcctttctgaaaggtaaagctTCTATGGATGATATCTATTAATAATTTCT
CCTGCATATAGCAACAAATGGGATGGCAAAACCATGAGAAGTGTGACCTT
GAATGATGGAACTACGCTCAGTTTTCATGGTAAGTTTGAttcgaaatttt
gttttgatatacgGCAAATTTTATAAATTCTCGACTATACAATCAAAAGC
TCACGAGTACCCAAAAcgaattttctattttggtgttctATATTCTCTGG
AAAGAAACCTTGGAACATATGATAATTGAAGGCCAATCTATATCATAGGA
TTTGTATATCTGTTACATAATATTTTCTATCCatgatttggtttgatttt
atttgatcattcatttgattcaattttcaaatcataTCAAATCATCTCAT
TTCTTTGACAGTAGTGAACAAACAGACGATTAGACACTGCTAGACAACAA
AGGGCTAGGATTACGAGATTTAGTGTAGCGGATGTGTAGTGTAGAACgag
ttttgaaaaactttgggAACACCCGAATACAGTAAACTCTCtttatttcg
aacccctactattcgaatctttctgtaattcgaactaagatATTCGTCCC
CTCAGCTGAAAAACATGTAATACactttgtaattcgaatctttctctaat
tcgaagaaaatttctgCCCCTTTCAAGATCGAGTTAGAGAGACTTAACAG
TAGCGACAGTCTTTTCTTCATTCAAACATCAGAATACTGACCCAAAAATG
GACTAACActgtcatttttaattttgaaacccttaggctcagatttgcag
agtTCCTACGCAAAACATAAGCAAcctggaatatttttcaagttgtcatt
tttgatttacagtgggaaattcgaatttagcgctcatttctcacttacta
aaataaaaaccaaatttcggaagttgcgttttttattaagaaagtgtgac
cagtgaaagaataacagaatttgattggctatgtttttaACCGTCTTTAA
AATCTTGGAAATTCAAACTCGCAGCCCAAACTATACTATACATTTcacca
tcagtatataaaataagaaatcatagcatcgATCTCCAGGCTACAAAAAT
AAATGTCACTGGACTTGTCCcacaaaatttgaacaaaaataaatgAACAA
AATTAGAGGGGGTTCTATTTTCGGTATTCTCAGAGACTGATGACGTCACC
CCCCTCCCTCCAAGATGCTCAAGTAAGGTTTAACGTTTTAGAAAcaattt
gagaatattttaagactagaaattgaaaatttaccaTTTTACTTTTATTA
AGATATTTTAATGGCCTCACTTGAAAGGGTTTTTCATTTATTACGAAATG
GGAGGGACACAAAGACAATCAACTGAAATCATAATAAAAGAAATGTCAAT
TTCATCCTCAAGGGAACgacttattttttttcttctcctgCTAAAATGAA
AGTTTCTTGCGTTTGtttcatttgctttttatatgTGATGTGTGATGGTG
GTGGGGTAAATGGTTTTTGTGGAAAAGTGAATGaattaatgaatgaatga
ataaatttgAACGGAGAAATTTCTAGTTCCTTTAACCTTTCATTTTCTGA
ACCTCTAAGTGTTGTAcaattaaatttagtgaaagTACCTgtgtaaaatt
aaatttattcaagctaagattttctaaaataaaactAGTTCAGCTTGCAG
CTTTATATGACAATTTGAGAAACACATTACATATAGCACTTCTatttttt
tatcgttttttgagAATAAGGCATAATTTTCTCGGATTGCTTCTCAAATA
GTTCATGTGTACTTTTCTGCTTTATCTTTGCTGTTTGTGTATTAGTTCAC
GCAAGATttcacttttgacaaaaaattttattttgaaaactttttcgacT
TTTCACATTCTGAGaaatttttcgcggaattttttttttttagaatgcgA
TCGAGTTTTTCTCATTGAAAAGATTTATTTCTTTgtgaacaaaaattttt
catcaaaaccaaaaaagaTTAGTCCATCAATCTGGAAATAAATTTCCAAT
TCGGTTTTCAATTTTCCAACTTTGAATCTTTTTTACTTCTTGAGAtctag
atcttcatttttttctaacttcaatttttttaccgtaacaaataaaaatg
atttctcgctgagcaaaaagttttcattcaaaattctaaattttttcgCC
AGCAAttcggaaatatttttctcgttctgtttacaaaatttcagcttcaa
agtatttttagttCCTGAGATATCGagattcattttttgttgagcttttt
tttttactccgtgaaaagtttgaatttcttctttttttcttcagatgttc
ggaaaattttgaaggaaaagaaattcgcgaaattcgaagaaattttCCAA
CAAAATCCGAACATCATCAACTCGTTGCGTAGTGGTTATGATGATCGGAC
ACTTCTCATGGAGGCTGTTAATGTAGATCGTTTCGACGTTTTCGTTCACT
TGATGAATTATCCTCAAGATTTTTCACTCGTGAACAATGTTGGTTGGAAC
GTTCTTCATCTTGTTGGTCGTTATGGAAAAGTTCGTTATTCGGAAAAGTT
TGATCAACAAACAATCGAAAAGTTGATCAATGGAAGAGACGATCGCAACT
TCACACCATTGCATTGGGCAGCACGTTGGAACaaacatgacgtcatcaga
tggtTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAATGATGCTGGTCG
ACGCCCTGATGAACATTATCGATGTGATGGTGTTACCAAAGAAATCATTC
GATCGTTTCGTTCGTC

Coding sequence (CDS) from alignment at scaffold_214:35055..44720+

>TCONS_00052444 ID=TCONS_00052444|Name=TCONS_00052444|organism=Clytia hemisphaerica|type=CDS|length=7830bp|location=Sequence derived from alignment at scaffold_214:35055..44720+ (Clytia hemisphaerica)
GGAAACGCCTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCAGGA
AACCCAATCAAATGGAGATGGCGAAAATAGACCAGGTCGCTCTCAGTCAA
CAACAAAAGTGGAATTTCAGGTTAATGAGCGAAAAGAAGATCGAGAAGCA
AGCGAATCATTTGACCCAACGAAGCTACGCGACCCTGAAAACGTTTTTAA
GTCGCAGCCACAGACgagtgaaaatgaagaagtcGTGAAAGAACTGTCCA
CTACATACACCTATATGAAAGGGAAATGTGGACATTCTTTCGAAAGCTTT
TTAAAACCACGAATCTTTTATTTCACCAAAGCTTTCACACCTTTATTTAC
TTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAATGAGA
GAAAGGAGGACGAAGTTGTGGTATTGTGCGAAGATATCTGTCAAGTAAAA
ATGGTTCAGTATGCCCTGGAAAGGATACACAAGCATCCAATTGCATACGC
ACCTTACCTTACCGGAGAATATCCTCACGACATCCACAAGATGAaggaaa
aattcgtcaaaaatttgGACGAGATGGAGACAGTTCTGATATCCGATTAT
CGGTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGGATCC
AGAAAACGAGGCCAAAGCACATTTTCTCGTCGAAGCAATCACACGAACCA
TAACAAATCTTGATGTCATTTCAAcgaaacctttttcaaaaaatgcttcC
ACGAGTATCgaaagagcttttcaaaaatatgtcgATGGGACTTTAGCAAT
CAAGACACACGTTGAATCGAGCAAAGACGCAGAAGATCTTCTGAAAGTAC
AATTCCAATACAAAGAAAAGGACggctcaaaacaaacaaaaattatttca
cagaAATTGACCGATTTCAGTTTCGACGTTTCACAATCTCTAgatgattt
taacaaaaatgaagAGCTATGGCAAAACCATTTCAGGATGGCGTTTACTC
TTTCAACTTCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAAAACC
ATGAGAAGTGTGACCTTGAATGATGGAACTACGCTCAGTTTTCATGatgt
tcggaaaattttgaaggaaaagaaattcgcgaaattcgaagaaattttCC
AACAAAATCCGAACATCATCAACTCGTTGCGTAGTGGTTATGATGATCGG
ACACTTCTCATGGAGGCTGTTAATGTAGATCGTTTCGACGTTTTCGTTCA
CTTGATGAATTATCCTCAAGATTTTTCACTCGTGAACAATGTTGGTTGGA
ACGTTCTTCATCTTGTTGGTCGTTATGGAAAAGTTCGTTATTCGGAAAAG
TTTGATCAACAAACAATCGAAAAGTTGATCAATGGAAGAGACGATCGCAA
CTTCACACCATTGCATTGGGCAGCACGTTGGAACaaacatgacgtcatca
gatggtTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAATGATGCTGGT
CGACGCCCTGATGAACATTATCGATGTGATGGTGTTACCAAAGAAATCAT
TCGATCGTTTCGTTCGGGAAACGCCTTGCTAACAAAAGACGAATCTAACA
AGGCCATAATCCAGGAAACCCAATCAAATGGAGATGGCGAAAATAGACCA
GGTCGCTCTCAGTCAACAACAAAAGTGGAATTTCAGGTTAATGAGCGAAA
AGAAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACC
CTGAAAACGTTTTTAAGTCGCAGCCACAGACgagtgaaaatgaagaagtc
GTGAAAGAACTGTCCACTACATACACCTATATGAAAGGGAAATGTGGACA
TTCTTTCGAAAGCTTTTTAAAACCACGAATCTTTTATTTCACCAAAGCTT
TCACACCTTTATTTACTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAG
TTCTGTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAAGA
TATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGC
ATCCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCACGACATC
CACAAGATGAaggaaaaattcgtcaaaaatttgGACGAGATGGAGACAGT
TCTGATATCCGATTATCGGTCTGTTCGTGGATTGGAAATGGCTCATACAA
TCATCTTTGTGGATCCAGAAAACGAGGCCAAAGCACATTTTCTCGTCGAA
GCAATCACACGAACCATAACAAATCTTGATGTCATTTCAAcgaaaccttt
ttcaaaaaatgcttcCACGAGTATCgaaagagcttttcaaaaatatgtcg
ATGGGACTTTAGCAATCAAGACACACGTTGAATCGAGCAAAGACGCAGAA
GATCTTCTGAAAGTACAATTCCAATACAAAGAAAAGGACggctcaaaaca
aacaaaaattatttcacagaAATTGACCGATTTCAGTTTCGACGTTTCAC
AATCTCTAgatgattttaacaaaaatgaagAGCTATGGCAAAACCATTTC
AGGATGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACCAACAA
ATGGGATGGCAAAACCATGAGAAGTGTGACCTTGAATGATGGAACTACGC
TCAGTTTTCATGatgttcggaaaattttgaaggaaaagaaattcgcgaaa
ttcgaagaaattttCCAACAAAATCCGAACATCATCAACTCGTTGCGTAG
TGGTTATGATGATCGGACACTTCTCATGGAGGCTGTTAATGTAGATCGTT
TCGACGTTTTCGTTCACTTGATGAATTATCCTCAAGATTTTTCACTCGTG
AACAATGTTGGTTGGAACGTTCTTCATCTTGTTGGTCGTTATGGAAAAGT
TCGTTATTCGGAAAAGTTTGATCAACAAACAATCGAAAAGTTGATCAATG
GAAGAGACGATCGCAACTTCACACCATTGCATTGGGCAGCACGTTGGAAC
aaacatgacgtcatcagatggtTGTTGGCCAAAGGAGCGGATCATGAATT
GAAAAATGATGCTGGTCGACGCCCTGATGAACATTATCGATGTGATGGTG
TTACCAAAGAAATCATTCGATCGTTTCGTTCGGGAAACGCCTTGCTAACA
AAAGACGAATCTAACAAGGCCATAATCCAGGAAACCCAATCAAATGGAGA
TGGCGAAAATAGACCAGGTCGCTCTCAGTCAACAACAAAAGTGGAATTTC
AGGTTAATGAGCGAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACCCA
ACGAAGCTACGCGACCCTGAAAACGTTTTTAAGTCGCAGCCACAGACgag
tgaaaatgaagaagtcGTGAAAGAACTGTCCACTACATACACCTATATGA
AAGGGAAATGTGGACATTCTTTCGAAAGCTTTTTAAAACCACGAATCTTT
TATTTCACCAAAGCTTTCACACCTTTATTTACTTGGTTCCTTCCGATACT
AGCTGCAACCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGACGAAGTTG
TGGTATTGTGCGAAGATATCTGTCAAGTAAAAATGGTTCAGTATGCCCTG
GAAAGGATACACAAGCATCCAATTGCATACGCACCTTACCTTACCGGAGA
ATATCCTCACGACATCCACAAGATGAaggaaaaattcgtcaaaaatttgG
ACGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGTTCGTGGATTG
GAAATGGCTCATACAATCATCTTTGTGGATCCAGAAAACGAGGCCAAAGC
ACATTTTCTCGTCGAAGCAATCACACGAACCATAACAAATCTTGATGTCA
TTTCAAcgaaacctttttcaaaaaatgcttcCACGAGTATCgaaagagct
tttcaaaaatatgtcgATGGGACTTTAGCAATCAAGACACACGTTGAATC
GAGCAAAGACGCAGAAGATCTTCTGAAAGTACAATTCCAATACAAAGAAA
AGGACggctcaaaacaaacaaaaattatttcacagaAATTGACCGATTTC
AGTTTCGACGTTTCACAATCTCTAgatgattttaacaaaaatgaagAGCT
ATGGCAAAACCATTTCAGGATGGCGTTTACTCTTTCAACTTCCATTTCAT
CTTTGGGAACCAACAAATGGGATGGCAAAACCATGAGAAGTGTGACCTTG
AATGATGGAACTACGCTCAGTTTTCATGatgttcggaaaattttgaagga
aaagaaattcgcgaaattcgaagaaattttCCAACAAAATCCGAACATCA
TCAACTCGTTGCGTAGTGGTTATGATGATCGGACACTTCTCATGGAGGCT
GTTAATGTAGATCGTTTCGACGTTTTCGTTCACTTGATGAATTATCCTCA
AGATTTTTCACTCGTGAACAATGTTGGTTGGAACGTTCTTCATCTTGTTG
GTCGTTATGGAAAAGTTCGTTATTCGGAAAAGTTTGATCAACAAACAATC
GAAAAGTTGATCAATGGAAGAGACGATCGCAACTTCACACCATTGCATTG
GGCAGCACGTTGGAACaaacatgacgtcatcagatggtTGTTGGCCAAAG
GAGCGGATCATGAATTGAAAAATGATGCTGGTCGACGCCCTGATGAACAT
TATCGATGTGATGGTGTTACCAAAGAAATCATTCGATCGTTTCGTTCGGG
AAACGCCTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCAGGAAA
CCCAATCAAATGGAGATGGCGAAAATAGACCAGGTCGCTCTCAGTCAACA
ACAAAAGTGGAATTTCAGGTTAATGAGCGAAAAGAAGATCGAGAAGCAAG
CGAATCATTTGACCCAACGAAGCTACGCGACCCTGAAAACGTTTTTAAGT
CGCAGCCACAGACgagtgaaaatgaagaagtcGTGAAAGAACTGTCCACT
ACATACACCTATATGAAAGGGAAATGTGGACATTCTTTCGAAAGCTTTTT
AAAACCACGAATCTTTTATTTCACCAAAGCTTTCACACCTTTATTTACTT
GGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAATGAGAGA
AAGGAGGACGAAGTTGTGGTATTGTGCGAAGATATCTGTCAAGTAAAAAT
GGTTCAGTATGCCCTGGAAAGGATACACAAGCATCCAATTGCATACGCAC
CTTACCTTACCGGAGAATATCCTCACGACATCCACAAGATGAaggaaaaa
ttcgtcaaaaatttgGACGAGATGGAGACAGTTCTGATATCCGATTATCG
GTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGGATCCAG
AAAACGAGGCCAAAGCACATTTTCTCGTCGAAGCAATCACACGAACCATA
ACAAATCTTGATGTCATTTCAAcgaaacctttttcaaaaaatgcttcCAC
GAGTATCgaaagagcttttcaaaaatatgtcgATGGGACTTTAGCAATCA
AGACACACGTTGAATCGAGCAAAGACGCAGAAGATCTTCTGAAAGTACAA
TTCCAATACAAAGAAAAGGACggctcaaaacaaacaaaaattatttcaca
gaAATTGACCGATTTCAGTTTCGACGTTTCACAATCTCTAgatgatttta
acaaaaatgaagAGCTATGGCAAAACCATTTCAGGATGGCGTTTACTCTT
TCAACTTCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAAAACCAT
GAGAAGTGTGACCTTGAATGATGGAACTACGCTCAGTTTTCATGatgttc
ggaaaattttgaaggaaaagaaattcgcgaaattcgaagaaattttCCAA
CAAAATCCGAACATCATCAACTCGTTGCGTAGTGGTTATGATGATCGGAC
ACTTCTCATGGAGGCTGTTAATGTAGATCGTTTCGACGTTTTCGTTCACT
TGATGAATTATCCTCAAGATTTTTCACTCGTGAACAATGTTGGTTGGAAC
GTTCTTCATCTTGTTGGTCGTTATGGAAAAGTTCGTTATTCGGAAAAGTT
TGATCAACAAACAATCGAAAAGTTGATCAATGGAAGAGACGATCGCAACT
TCACACCATTGCATTGGGCAGCACGTTGGAACaaacatgacgtcatcaga
tggtTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAATGATGCTGGTCG
ACGCCCTGATGAACATTATCGATGTGATGGTGTTACCAAAGAAATCATTC
GATCGTTTCGTTCGGGAAACGCCTTGCTAACAAAAGACGAATCTAACAAG
GCCATAATCCAGGAAACCCAATCAAATGGAGATGGCGAAAATAGACCAGG
TCGCTCTCAGTCAACAACAAAAGTGGAATTTCAGGTTAATGAGCGAAAAG
AAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCT
GAAAACGTTTTTAAGTCGCAGCCACAGACgagtgaaaatgaagaagtcGT
GAAAGAACTGTCCACTACATACACCTATATGAAAGGGAAATGTGGACATT
CTTTCGAAAGCTTTTTAAAACCACGAATCTTTTATTTCACCAAAGCTTTC
ACACCTTTATTTACTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTT
CTGTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAAGATA
TCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCAT
CCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCACGACATCCA
CAAGATGAaggaaaaattcgtcaaaaatttgGACGAGATGGAGACAGTTC
TGATATCCGATTATCGGTCTGTTCGTGGATTGGAAATGGCTCATACAATC
ATCTTTGTGGATCCAGAAAACGAGGCCAAAGCACATTTTCTCGTCGAAGC
AATCACACGAACCATAACAAATCTTGATGTCATTTCAAcgaaaccttttt
caaaaaatgcttcCACGAGTATCgaaagagcttttcaaaaatatgtcgAT
GGGACTTTAGCAATCAAGACACACGTTGAATCGAGCAAAGACGCAGAAGA
TCTTCTGAAAGTACAATTCCAATACAAAGAAAAGGACggctcaaaacaaa
caaaaattatttcacagaAATTGACCGATTTCAGTTTCGACGTTTCACAA
TCTCTAgatgattttaacaaaaatgaagAGCTATGGCAAAACCATTTCAG
GATGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACCAACAAAT
GGGATGGCAAAACCATGAGAAGTGTGACCTTGAATGATGGAACTACGCTC
AGTTTTCATGatgttcggaaaattttgaaggaaaagaaattcgcgaaatt
cgaagaaattttCCAACAAAATCCGAACATCATCAACTCGTTGCGTAGTG
GTTATGATGATCGGACACTTCTCATGGAGGCTGTTAATGTAGATCGTTTC
GACGTTTTCGTTCACTTGATGAATTATCCTCAAGATTTTTCACTCGTGAA
CAATGTTGGTTGGAACGTTCTTCATCTTGTTGGTCGTTATGGAAAAGTTC
GTTATTCGGAAAAGTTTGATCAACAAACAATCGAAAAGTTGATCAATGGA
AGAGACGATCGCAACTTCACACCATTGCATTGGGCAGCACGTTGGAACaa
acatgacgtcatcagatggtTGTTGGCCAAAGGAGCGGATCATGAATTGA
AAAATGATGCTGGTCGACGCCCTGATGAACATTATCGATGTGATGGTGTT
ACCAAAGAAATCATTCGATCGTTTCGTTCG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033167	XLOC_033167	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00052444-protein	TCONS_00052444-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_214	supercontig	scaffold_214:35055..44720 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.73308e-05	0.25845	7.18564e-06	0.128025	1.58542	1.25052	1.73419	1.69832	1.84771	2.09687	2.75591	0.931034	8.65636	6.76245	3.04585	4.6189	3.72354	5.0627	13.747	12.0303	4.58074	5.4278	3.64268	3.56425	1.89178	1.9804	12.527	11.4177	8.41786	6.84305

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00052444 vs. Swiss-Prot (Human)

BLAST of TCONS_00052444 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00052444 (transcript) - C. hemisphaerica