TCONS_00052434 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052434
Unique NameTCONS_00052434
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length114

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052434 ID=TCONS_00052434|Name=TCONS_00052434|organism=Clytia hemisphaerica|type=transcript|length=114bp
tatcACATGtctgaaaattctaccttaataAATACGCCCCTCAACCACCC
CCTCATCAGGAACAGTAATTGCACACAGAATGCTTCTTagatgtatatat
ttttcactaaaaat
Run BLAST on NCBI

transcript from alignment at scaffold_213:1034848..1034961

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052434 ID=TCONS_00052434|Name=TCONS_00052434|organism=Clytia hemisphaerica|type=transcript|length=114bp|location=Sequence derived from alignment at scaffold_213:1034848..1034961 (Clytia hemisphaerica)
atttttagtgaaaaatatatacatctAAGAAGCATTCTGTGTGCAATTAC
TGTTCCTGATGAGGGGGTGGTTGAGGGGCGTATTtattaaggtagaattt
tcagaCATGTgata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033159XLOC_033159Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052434-exon-scaffold_213-1491911889:1034848..1034961TCONS_00052434-exon-scaffold_213-1491911889:1034848..1034961Clytia hemisphaericaexon
TCONS_00052434-exon-scaffold_213-1510915933:1034848..1034961TCONS_00052434-exon-scaffold_213-1510915933:1034848..1034961Clytia hemisphaericaexon
TCONS_00052434-exon-scaffold_213-1575043694:1034848..1034961TCONS_00052434-exon-scaffold_213-1575043694:1034848..1034961Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:1034848..1034961 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052434 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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