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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052318 ID=TCONS_00052318|Name=TCONS_00052318|organism=Clytia hemisphaerica|type=transcript|length=395bp
ctctTTATCAGCTGAAATGGATAGAAAAGGTACCAGTTATATCACAAAAC
AGACATGAAATACATTTTGGTAACTGGAGGAGTAATTAGTGGTGTTGGAA
AAGGTGTGATCTCCAGCAGTATTGGTGCCATACTGAAAGCATGTGGATTG
AAtgtcacttcagtgaaaattgaTCCATATTTGAATGTTGATGCTGGTAC
CTTCTCACCTTATGAACATGGTGAAGTCTTTGTATTAGATGATGGTGGTG
AAGTTGATTTGGATCTTGGAAATTATGAAAGATTTCTTGACATCAAATTA
CATCGTGATAACAATCTTACAACTGGAAAACTTTATCAAAATGTAATTGA
GAAAGAAAGACGAGGAGACTATCTTGGTAAAACAGTGCAGGGTAT Run BLAST on NCBI protein sequence of TCONS_00052318-protein >TCONS_00052318-protein ID=TCONS_00052318-protein|Name=TCONS_00052318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MKYILVTGGVISGVGKGVISSSIGAILKACGLNVTSVKIDPYLNVDAGTF
SPYEHGEVFVLDDGGEVDLDLGNYERFLDIKLHRDNNLTTGKLYQNVIEK
ERRGDYLGKTVQG Run BLAST on NCBI transcript from alignment at scaffold_213:96113..112659- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052318 ID=TCONS_00052318|Name=TCONS_00052318|organism=Clytia hemisphaerica|type=transcript|length=16547bp|location=Sequence derived from alignment at scaffold_213:96113..112659- (Clytia hemisphaerica)
CTCTTTATCAGCTGAAATGGATAGAAAAGGTCAAAACTATTTTCTTTGCT
CAGTGATCAGAGAGGAATAATCCTTTTTCAATCAGCGATTCAAGCTTTCA
TCATATTATTCATGGTCTCTAACCAGACGATCTCAATCGAACGGAATTGA
CGATCGAACTAGTGGAACCAAATCGAACGCAATCGACCGATTGAAATTCG
ATTGTAAAATGCGGATTGGCCCAACAGCGAAATTTAATGCCTGCGAAAGT
TTATCCCCCATAAAAGTAATTTGCGAGATATTCTATTTGCCGCGCAAGCG
CACTTTTTGTAGACCAGACGTCCGCGCTCGATAGGATCGATCATCAGAAC
CGCTCAATGACGGATCGATATGTGATCAATGGATTACTTAACGATCCAAC
GAAGGTTTCTAATCGTAACACGTAATTCTTTTTAAAATCTATCGATGGCT
TTATAGGCAGCTTCCCCTAGAAGTTTGGAGTATTGTGCTTATTATGTGAA
GTTTTTTACCAATTTTCATGACAAGGCTATTATATTATTATTATTATCAA
TATACTTGTTAAAATGTAATGTCTTTTCATTCATCTTAAATATTCCCGGG
AGTATACCCAAAATTAATCATCTTATTCCCAAAGCAACCAAACAGCTGTT
TGCTTCCGATGATAAATCAGAATAGAACAAAAGGCAGTGACTCTCCATCT
ATCTTTATTACTTTCATGTTAGAACAAACAACAAACGAAAATAAAAGAGA
AAGGGGAAATCATGTATATTTACGATTGGCGTCACAAAAATATTATACAA
TAGTAATATTTAAGAACGTTCGTTCGTCTTTGCTGTATATTATTTACTCT
GTTATAAAACTTTAGTGTTTTCTTGAGAAAACGTTTTGCTTTTCGAGCCT
ACAGTAGTTGTTTGAAATATTCACTTTGAAAAAAAAAAAGTTTTTCTGCG
GCCAGGTGCCTATCAAAAATAAGTTCGCCCGTCCAATTTCCGGAAACAAG
ACTACTTTTTTTTGGCCTAATTGGTTATCGAAGTAATCAATATTATCAAT
GTTATAAAAAGTAATCAATAACAATCGAAGGGTTATTGAGTCTTCAAAGG
GTTCGTGTCTTCAAAGGGCTGTTAAGAAAGTGATTGAATACAATTTTTTC
GAAATTTAGATTCTTGAAATTTGATTGTTAATCGATAAGTGGTAGTTCGT
TTACCTCAATCATTATCTTCTATCATTATCGATTACTTCCATAATTAGTA
TACCGCTTTTTAGGCCCCTGACAATAAGGCTAGGCTTACCTCTTTTCTCT
TTTCTATTCTATTCTAACAATAAAATACTACATAGTTTTCACATACCGTA
AGTTGGTCTAATATCGACATCCCTCGTCTAATTCTGACACCCTTCTTTAG
GGACAAGAATAATATGAAAGCTTGAATCACTGATTGAAAAAGGATTATTC
CTCTCTGACCAATAAGCAAAGAAAAACAGTTTCAACCTTTCTCTCAATTT
CAGCTGATAAAAAGGGTGTCAGAATTAGAGGAGGGGAAGAATAATATGTC
AATATTGTGTTTTAGTTTAGTATTATTTATTGACCCTGACTGAAAATAAA
TAGAATAGGATAGAAAATTAGACAAAATACATCATGNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTTGGGAAA
TGGGGTGAAGAGAATCTTGTGTTTGTCCCATGACTATCAGTGAAGGCCTT
CATTTTTTTGCTGTTGAAGGGAGGCCCATTGTCCGAGATTTGGGTTTCTG
GGTAGCCATACTCGTCGTATATTTCTCCTAGCGCTGGAATAACCTTATCA
GCTTTTGTGGACGAAACTAGTTTGGCAGCAGGGTATCTAGACCCTATATC
CTGTACAATCACTACATGCTTTGATGATGGCATTGGGCCGAACAGGTCCA
CAGCTACGGTCTCCCAGCATCGCTCAGGCACTTTATGGCCAGTTATAGGC
TCTTTTGTTTTCTTGTCGACAAATATGGCACATTCATTGCATTCGGAGAC
GAAACTTTTTACTTTGTTGAACATATCATGAAAGAAAAAGTGAAATCTAA
GTCTTCGTTCAATTCCGCTTCGCCCAGGATGCGAACCTCTATGTGCAAGA
CTAATGGCCAGATCGTGTAACGATTTTGGCAGAACAATTCGATCTTCTTT
GAAGATGATGCCATTTGCAACGATGGTCAGTTCTTCGAGTATGGAGTTGA
ATCTCTTAACCTCCCTTGAAACCCCGTCTGGAATTTTGGAATATCCCTTC
CTGAGATATTCTTGTATTTTACTCAGAGTCTCGTCTTTGCTTGTTTCCTT
TGTAATTTTTGCTAAGGTGATTTGGTCAGTTCTTGGCGTTGTGTGAAGCG
CATAGAGAAGGTTGTTTAGTTCGTTGCATTCCCTCCTTTGTTCAGTAGGT
AAACTGGATAATTCTCTTGCGTGTCTACTCATGTAGTCCACCTGATTAAG
CGAGCCTTTTTGGTATTCGACGATGAAAGGGATGTCTTGGTGGTTCAGTT
TTATTCTTCTGGTCCTAATTGAGCCATTGCGACGGCCATTGAATATGTGC
ACCAAAGGTTTATGGTCTGTGACCACCTTGATGAGAGTGGGCGAGCCCAC
AACATATTCTCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGAT
ACATTGCCGCATACCGCAATTCATAATCAAAGGTGAATTCCGTGAATGCC
TTGAGCGTGTCATCCGGATGGCAGTCAGGGTCAAAGTAGAGTTGCGTTGT
GTTTGAATTCATATTTACAGACCTGGCTCCTTGGCCAGGTGGTTCACCAG
CCGTTGAAAGCTGAGTCAACAGACCTGATACTCGGACCAGGTGGTTCACC
AGTTGGTGAAAGCTGTATCCCCAGATCTAGTGCGCTGACCAGGTGGTTCA
ACGGACAGGTGAAAGCTGTATATGAATGCTACAGACCAAACGTTTGCCTG
GTAGTTCACCAGTTGGTCAAGACTGTAGATTGAATTGACTTACCGCTTGG
GTTGTGGAGTATTCCTGTTGGCAAATCTCTGCGATCAGCGATTAATAATT
AATAAGATGACTTACCATATTGTAGGTCTCCTGCTTACTAACCGGATAGG
GATCGACTTGTTTGCATCAACTGAATGATCACTTTATCTTCGTCGCCAAG
AATAATATGTCAATATTGTGTTTTAGTTTAGTATTATTTATTGACCCTGA
CTGAAAATAAATAGAATAGGATAGAAAATTAGACAAAATACATCAAGGGG
TGTCAACATTAGACCAAGTTACGGTAATACACATTGACAGAAGTATTCCC
TGCATGCAATGTTTATATCAAAATCTGCCATCTGCTGTAATAAAAAAGTT
GTCTCTTCTTCTCAGTGACTTCCGTAATTTGCTCCATCGGAAAGTCATTT
TTAAATTTCAATGATGTAGATTAACAACCTACCCTAATTTTTGATGCCAA
CAGTTTAAACTTAAACTCATATATCAAGATTATGGGATTTAGTACAGACT
GATTTTACTTTCATTTTTAGTGGTTTCATTTTCGATTTCAAGCCAACATC
TTAACAACAGGGTGCTTGCCCATAATTACAGGGGTTTGCACCAAAAACAA
AACATAAAAATTTTTCCAAAATTCCCTGTTTCCATTAATGCAATGAGAAA
TGAAACTTTTCTATCAGTGTGGCTGGAATCCTTCAGATCCTTGGTTAGAA
AAAGCTATACCTATTTACTTCTTTCTTGTTAGTTTCAACAAGCCATCAAC
CAACAAAATATCACTGACATCAAAAAATTTATACAACCTTTCCGCAGCGA
ACACTTCTAAATATAAAATGTATAATTGTAGATTATAATTAGGAAATTTT
TCTATATTTAGCAAAACAAACACAAAAGATATTACTTACCATTTTTACCC
CCCACTTTTACTCTTCATTGGGCATGATTTCAGGCAGAGACTCAACACCC
TCATCACCCCCATCATAAGATTCTCAGGTTGTCCCATTGTTCATATGCTT
TTCTATGAAAAAATGATCACAACCCATTCATGTTACTGATATATAAAGAC
CAAAGTAAAATCTTCCACATTAAAAAGGAATTATTTGAATAGCTTTCATT
CAGAGAAAAATCTTAATGATAAAAAGAATTTGTAAAAAAATGTTACTTTT
GGGCTTACGTTTTTGCCTGTAGAAATTATCAACAATCTTTGTGAAAAATA
ACTTTACTAGTGTAATAGCAACAAACCAATAGCGCAGTTGGGAGAGCAAT
CGCCCGGCAAGCGAGAGGTCGTGGGTTCAACCCCCACTCGATTCGTTACC
TTTGAGAAAACTGAGAAGTACATTAGTGCACGATCCGTTGATTCATTACC
CATAAGTAATACGCACTTGATTTCACACAGTGACTGTTGATGGACTAGTT
GTCTGAAATGCCTCTCCTCAATGTACATAGCTTAACAGTTCTCTCAAAGT
TAGCGGGTTGGTTGGAGATTGGACACTAGCTGTGTCTCAGTTCGTGGCAA
TTCCATTGATTCGTAGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTTATTCTTTATGATTTTTTGCACAAAGATGCATAACTATAAACCTTCGA
ATGTGGCGGAGCTCGATTTTTGGAAAAAAGATTTTGGGGTAAATTTCAGC
TAAAAAACGGCTAGAATGGGGTTTTTTGGACTTGTTTTTTTCTGACTTTT
TGCATGAAAGTAGGTAAAAGATGGCTCAAGCAAATTTTTGTAAAAAAAGA
ATTTTTCAGCTCAAAAAACGCATATTTATTTATAAGAACCACTATTAGTA
AGCATACATCGATGTTCTTAAAATTACTGAATTTTTTATAAGATATGTTT
TTTTGCTCTCGAAGTCTTGAATATGAAAGAATATATTTCAAGAGCATGAA
ATTTTGGTTTCTAAACGTGTTTTTTTATAAGAAAAAAACGACTAATTTTA
ATAGATCGTCACTATTTGTGTTCTGAATAATTGTTTAATGGTCACGTTTA
TGTAGATATCAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATA
AAAGTATCACTTGTTAATGCATTTAAATGACTTTTGTTAATTCCAGAGTC
TCCCACTCAATAAACAATCAATAACTTTTTCCAATGGCAAATTGATAATC
AGGATCTTAAGTGAGGCTTGATTGTCTATAGATTGATTCATGATTCACTG
GCTCTATGATGATTGAGTTGATGAAAATAAAACAATTGATTATCAATCAA
AACTCAAGATTTTGGAACAGACTCAATTACCTATTGATTATTGGAATCAA
TCGAACCGATATCAATAATCTTTCAGATTAAACATTCTAATCGTACAATG
AGTTTTTCTTTCTTATTTGGCGCGCCTTCAAAGAGAGAAATCAATCGTTA
ATTGCATCCTGTAGAGAGCAATTAAGAGCCTTTTTTTTTAAATCTTCAGA
ATAAAGAAAGTGTGATACCTCACCCTCTTAGATTTTGATGAAATTTAGAC
CAAATGATCTATCACACAAGAAAATAAGACCCTGAAAATTTCACCTTAAT
ATCTCAAGTAGTTTTAAAGATACAGTGTCTCAAAGATAGGCTACTAAGTG
AAAATTGACCCCTAAAAATCATGAACTCTGGTGGAGAGCAGATTTTGAAA
GACAATGAATTTTTATTTGACTACATTGGACAGCTGATTTACAGTGGATT
TCAAGAACTTTTTGTAGGGAATCAGAAAAAATCAAATTGAGTCTCCAAAA
TTTTCCCCGAAAATCTCTAGCACCTCCTGTAGAGGGCTTCAAACTTTCCG
TAATCTGGGTTTGGAAGCACTTTTAGCTGTCTGCTGATGGTCCTTGTGGT
TTACTGGTGGGTTTTGACAGCAAAAATAACATTTTCAGGATTTCTATTTT
TGCGTAACCGTCAAAAATGGCCAAAGAAATTGCTATTTTGGCAGATCTGG
AGCAAAATTCAAGATGGCGTATCTTTTTAAACCCACAACAAATTTTTTTG
AAACTTTTAGTAAGGCTTCCTTAGTAGGTCTAGTTTCTAACCTCAAAAAA
TCTCAGTGGGGGTTTGAAGTCTCTTAAAGAAATGATCGATTGAAAATTTG
CTTAAAGGGACATTAAAGTAGTAAAATGTAAACACTGCGCGAACCACGTG
TCATTAAAGAGAACAATTAAAATCACGTGTCCAAAACAAACTTGTAAAAC
AATTGAACAATCAAAATTAGCCATATTTGGTTTGATTTGTTATTTTGACA
TGTGACATTTGTTTTGATTTTGTATCTGCTGCGTACAGTTTGTTTACAAA
TTTCGCAAGTACTGTTATGTCCCTTTAACTTCATTGTTTTTAGCCTAAAG
CTAATCATGACAATTGAACTTAGAAGTTTTGCGGTAAAGCGCAAATTATT
GTCAAAGTAGGATTTTCGAATGAGTCTAAAACGTTTTTAAATAAGATTTA
AGTACTGTTAAATCCATTTAGTTGAAGTAACCTTCTTATATTTAAGATGA
ATATTCACCAAAATGTGAAAGGTTGAGGCTTTTCCTGAAAATATGGGCCC
TGGAATGGTAGGAAAGACTAGATGCCAGTCTCATTTTTTTACATATTCTG
TACTTAAAAATAAAGAAACTGCCATAAAATGTCATCTGTTGATGGAAATG
ACCTGAAATCTTTTGCAGTTGTTCCCTTAATGCCAATGATTAGTTGGCTA
GAGAATATCAACCAATACTTTGACAAGAATTAACCTTTAGAGCCCCCCAA
GTGGACCTGATTTAGCATTTTAAGAGGGAAAAAACAACGAAGTTAAGCAA
ATTTTCAATCGATCATATCTTTAAGAGACTTCAAACCCCCACTGAGATTT
TTTGAGGTTGTAAACTAGACCTACTAAGGAAGCCTTACTGAAAGTTTCAA
ATAAATTTGTTGTGGGTTCAAAAAGATACGCCATCGTGAATTTTGCTCCA
GATCTGCCAAAATAGCAATTTTTTCGGCCATTTTTGACGGTTATGCAAGA
TTAGAAATCCTGAAAATGTTATTTTTGCTGCCAAAACCCACCAGTAAACC
ACTCTAGGTCAAAAGTTTGCTTCAAAAATGTCTCAAGGACCATCAGCAGA
CAGCTAAAAGTGCTTCCAAACTCAGATTACGTTTGAAGTTTGAAGCCCTC
TACAGGAGGTGCTAGAGATTTCGGGGAAAATTTTGGAGACTCAATTTGAT
TTTTTCTGATTCCCTACAAAAAGTTCTTGAAATCCACTGAAAATCAGCTT
TCTAATGTACTTGAATGAAAATTCATTGGCTTTCAAAATCTGCTCCCTTC
CAGAGTTCATGATTTTTAGGGGTCAATTTTCGCTTAGTAGCCTATCTTTG
AGACGCTGTATCTTCAAAACNTGCTCCCTTCCAGAGTTCATGCTTTTTAG
GGGTCAATTTTCGCTTAGTAGCCTATCTTTAAGACGCTGTATCTTCAAAA
CTACTTGAGATATCAAGGTGAAATTTTCAGGGTCTTATTTTCTTGTGTGA
TAGAACGTTTGGTCTAAATTTCAGCAAAATCTAAGAGGGTGAGGTATCAC
ACCCTGAAGACTCTTAGAAAAAATTACTCTTAATCGTTAATCACACTCTT
GATGCCCTGCCAATGTTTACAAAATTGATTTAAATATTTTTTCTTACATT
TTTTTTCATCAAATGTTTTAATTGCATTCAGATTTCATTTTGTGAGAAAG
AAAATCTATAAACTTTAATAAAAGAACAACGTAGATAGAAGAAAAAAAAT
GTAAAACTTTCAGTGTAATTTACTTTTCTAACGGGGAAAAGTAGTGAAAC
AAGTTTTGCGCTTAGCTCGTAATCACATAATAACTTGTACAACTTGAAAA
TTGCACTCGTGATTTTTTTGTTTAGAATTTTCCTTGTCCTTTCGGACTCG
GAAAATTAATAACAAAAAAAATCACTCCGAAAATTATTCTTGAATTGCAC
TCGTTATCATGTGACTACATCATATACAAATTTGTTTTTCAAAACATTTT
TGGAAATCTTGTTTGCAGGAGTTTATACTGAAAGTTATTATCATTTTAAA
ATGGCCCCAAAAAAGGGTCCAAAACTTCTCGAATCAACTAAATTTAAGCT
GCATATATAATATATATTTCAAGGTAAGGGGCCTTTTTAAAGCTAATTTA
TCAGACTTAATAGTTTCTTTAGGTTTTCTCATTTTCACTTACCAAAGGTA
CCAGTTATNACAGTACAAAAGACGATCCAGAAAAATTCTGCTTCGAATAG
GAGAAGACCACGAGAAAAGGGGTTGGTCTAAAAAGCAGGGTAGCCAATGG
GGTAGCCAATTGGGCTAGGTTATGGGGTACCTCTTTTTGCCTAAACTTTT
GAAATCTGAAACCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAACTTTTGAAATCTGAAACCTGTTTTCAT
GTGGAAATAACTATACAACATCTTGTTAATGATTCCATGTAATAAAATTT
AAGATTCCTTTCGAACTTCAGCCGCAATAGCCTTTTTTCCAAAGGTACTA
AACTTTGTTACTTCTCAAGAGACCTGGCGCCATTTTGTCTTCCTGCTTGG
CTTCGTTTGAAAATTTACAGACCCGAATAAAAAATATATACAAAACAGTT
TTTAATATTTTAGATTTAGATTTTATTTATGTTTTTAATTGTTATTTCCG
TGAAGCTGTAATTCGATGATAATAGCTTTGACTTTGAAATCGCCTTTAGG
CCATATGATCTCTAATCTTGTCATATCTTAACAATCCTTTGTTATTGAAT
CTATTGTTTAATTTATATCATGTTTAGATGTTTCAAACAATNATCTTAAA
ATGGCCCCAAAAAAGGGTGCAAAACTTCTCGAATCAACTAAATTTAAGCT
GCATATATAATATATATTTCAAGGTAAGGGGCCTTTTTAAAGCTAATTTA
TCAGACTTAATAGTTTCTTTAGGTTTTCTCATTTTCACTTACCAAAGGTA
CCAGTTATATCACAAAACAGACATGAAATACATTTTGGTAACTGGAGGAG
TAATTAGTGGTGTTGGAAAAGGTGTGATCTCCAGCAGTATTGGTGCCATA
CTGAAAGCATGTGGATTGAATGTCACTTCAGTGAAAATTGATCCATATTT
GAATGTTGATGCTGGTACCTTCTCACCTTATGAACATGGTAAATATTATC
TTTAGAAACCTAAATGGAAGAAGGGAATTAGATTGGCAAATAATTGTCAA
AAAGGTTTTTCAATTGGGAACTGTTTTTCAAAGCCCTGAAATAGCTCAAA
TTTGGAATATACTCGAAAGGAATTAAAATTGGCAGGAATTTAATTTAGGG
GAAATTCTCTTCTGTTATTTAGGTGAAGTCTTTGTATTAGATGATGGTGG
TGAAGTTGATTTGGATCTTGGAAATTATGAAAGATTTCTTGACATCAAAT
TACATCGTGATAACAATCTTACAACTGGAAAACTTTATCAAAATGTAATT
GAGAAAGAAAGACGAGGAGACTATCTTGGTAAAACAGTGCAGGGTAT Coding sequence (CDS) from alignment at scaffold_213:96113..112659- >TCONS_00052318 ID=TCONS_00052318|Name=TCONS_00052318|organism=Clytia hemisphaerica|type=CDS|length=678bp|location=Sequence derived from alignment at scaffold_213:96113..112659- (Clytia hemisphaerica)
GTGAAGTCTTTGTATTAGATGATGGTGGTGAAGTTGATTTGGATCTTGGA
AATTATGAAAGATTTCTTGACATCAAATTACATCGTGATAACAATCTTAC
AACTGGAAAACTTTATCAAAATGTAATTGAGAAAGAAAGACGAGGAGACT
ATCTTGGTAAAACAGTGCAGGGTATGAAATACATTTTGGTAACTGGAGGA
GTAATTAGTGGTGTTGGAAAAGGTGTGATCTCCAGCAGTATTGGTGCCAT
ACTGAAAGCATGTGGATTGAATGTCACTTCAGTGAAAATTGATCCATATT
TGAATGTTGATGCTGGTACCTTCTCACCTTATGAACATGGTGAAGTCTTT
GTATTAGATGATGGTGGTGAAGTTGATTTGGATCTTGGAAATTATGAAAG
ATTTCTTGACATCAAATTACATCGTGATAACAATCTTACAACTGGAAAAC
TTTATCAAAATGTAATTGAGAAAGAAAGACGAGGAGACTATCTTGGTAAA
ACAGTGCAGGGTATGAAATACATTTTGGTAACTGGAGGAGTAATTAGTGG
TGTTGGAAAAGGTGTGATCTCCAGCAGTATTGGTGCCATACTGAAAGCAT
GTGGATTGAATGTCACTTCAGTGAAAATTGATCCATATTTGAATGTTGAT
GCTGGTACCTTCTCACCTTATGAACATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052318-exon-scaffold_213-1575043694:112631..112659 | TCONS_00052318-exon-scaffold_213-1575043694:112631..112659 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1575043694:96472..96662 | TCONS_00052318-exon-scaffold_213-1575043694:96472..96662 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1575043694:96113..96287 | TCONS_00052318-exon-scaffold_213-1575043694:96113..96287 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1510915933:112631..112659 | TCONS_00052318-exon-scaffold_213-1510915933:112631..112659 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1510915933:96472..96662 | TCONS_00052318-exon-scaffold_213-1510915933:96472..96662 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1510915933:96113..96287 | TCONS_00052318-exon-scaffold_213-1510915933:96113..96287 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1491911889:112631..112659 | TCONS_00052318-exon-scaffold_213-1491911889:112631..112659 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1491911889:96472..96662 | TCONS_00052318-exon-scaffold_213-1491911889:96472..96662 | Clytia hemisphaerica | exon |
| TCONS_00052318-exon-scaffold_213-1491911889:96113..96287 | TCONS_00052318-exon-scaffold_213-1491911889:96113..96287 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_213 | supercontig | scaffold_213:96113..112659 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006221 | pyrimidine nucleotide biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003883 | CTP synthase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006221 |
pyrimidine nucleotide biosynthetic process |
| molecular_function |
GO:0003883 |
CTP synthase activity |
Blast
BLAST of TCONS_00052318 vs. Swiss-Prot (Human)
Match: PYRG2 (CTP synthase 2 OS=Homo sapiens GN=CTPS2 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.006e-33 Identity = 94/112 (83.93%), Postives = 108/112 (96.43%), Query Frame = 1
Query: 55 MKYILXXXXXXXXXXXXXXXXXXXXXLKACGLNVTSVKIDPYLNVDAGTFSPYEHXXXXXXXXXXXXXXXXXNYERFLDIKLHRDNNLTTGKLYQNVIEKERRGDYLGKTVQ 390
MKYILVTGGVISG+GKG+I+SSIG ILK+CGL VT++KIDPY+N+DAGTFSPYEHGEVFVL+DGGEVDLDLGNYERFLDI L++DNN+TTGK+YQ+VI KERRGDYLGKTVQ
Sbjct: 1 MKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKTVQ 112
The following BLAST results are available for this feature:
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