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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052203 ID=TCONS_00052203|Name=TCONS_00052203|organism=Clytia hemisphaerica|type=transcript|length=6304bp
actttctctgaaaatttcccctaaaaaaggtcaaaatttttccaatctcg
CTCCCCTCCCCCGGAACGAAAACTCGTGGCTACGCCTCTGCTAGGCTTTA
CTCAATCCATCTCGATGAACAATGTCGCAgatttttcttgctcgcttcgc
tcgcatttcctaaatgtttctaaaatgaccTAAATTTTAAGTTCAAATTT
CGGTATACCAATGCGACCAAAAGGGGTGCCAGAATAAGCCTACAAGAAAG
CACCTTAagccaaaattctacttttgctTACCAGCCTGTACCTACCCAAC
ACGCTACAGTTTGGTAATTGTTATAgagaattttggatgatgaaaaaccc
gacctttatcgtccgcacataccaagcacccatttttgcctaagtacccc
ctccgggGGACGAGTAcctaaaaaatggggaaaaattgATCAGTATTGGT
ATTTgaacgaaaataatttttgattttatgattttcttacaaaaattaat
aatccttttttatttacaaaataacTGAAATGAATTATTCAAAATCCTTT
AACAAAAATTCATGATCGTCCAAAGTTTAACTCATAGCGTAACATCTTGG
GGATGTCACACTTCTTGAGATCGTCTATGGCAAATGTTTGTCGTACACTA
CGTAATGCACTCATCTTCAAAGTCCTTACACTACACAGTAAGTGTTGTGT
CCACAAATGCTGACCTGTGTTTTTTACAGGTCCTAAAACAAGAACGCGTT
TGCCATTGGGTGAGAACAGAAAATGAATTTTGTGATTCAAATCATAATTT
CTGTTCAAATGAATGTTCTTGACAACACAGCAGTTGATTGTGTCCAGAAC
AACAACTTCTTTCTTATTCAGTCGAATAACAATCAAATTTGAGATATTGC
TGAACGCGAAAGAGTATTTCGAAAGCTCGAATGTGGTTTTCAAAACCATT
GTTTTCAGTGTTTTCACTTTATCTTCTCttgatgaaaattggaaaagaat
TTCCTTTATTTTATAATCATAATCGATGTTGACCAGACGGTTGCCAACAG
GAATCAAGAACGAATTCTTAAGTGTTGAAACGTATTTGCGGATTATTTTT
GTGCGTTTGGTGTCTAGCGTTACACGGAGAAACTCATGGTATAGATCGGT
ATCGGTGAAAATGACTTGTCCGGGAGTGAACGGGTTCCAGTAGTCCATTG
TACCGAATTGTCGGGCGAAACACCGAACTGGGTTTTCTTTCAATCTAATA
TGTGCCACATGGATGACACCGGGATCTGAAGAATTCTGGACAATCCAGAG
TGAACCACCGTAAAGATAGATAGAGCACATATCTTTATCGATAAACTCGA
TATTAATATCGGTGTGTTTCACTTCGAACGATTCGAAATCGATAAAATAA
CACGataactttttgttgtttttgaaacGGAGGAGTGCGATGGATCGGTT
GTCGGACACATAGAAACCATGTGTTTTATAAAGCTCGTGCACTCCTACGC
AGGAGCGATAACGTGCTAAAATGAACTTGATGTATGTCGTTCGGTTTGGA
TGCCAAAGAACCAAAGTGTGGGTGAGAGATTCGATCAATTCAGAGCGGCT
CAGCATCTCATCAAAATAATCAACTTCTCGAACTTGCTTACTTGTCTGTG
GTGAtggttttaaaacaaaacctttctTCAATAATTTCCGGATTGTTTTG
CAAGCGTTGGTCACATCCGGACATGGTGTCATACGGAAGTCTTCGTTGAG
GTTTTTGATACCATCGATTTCACATCCAGAACATTCGCATTGTTGAATAT
TCGGTGGTGAAGTTGGTGGAGACGACATGTTGACTGGTTTTCTTCGCCAA
GCTCTATATTTTtctgtcttctttttctttttcttattctaaaaaaaaaa
caaataataaaaatttcaaagttcaaagttcaataataattttcaaatat
ttgtattttatatttttttctcagcagataaattttctttttaagtttGC
AAATATTTACTGTGAGTAAACTTTTTGCGCTTAGCTCTACATACAGTTCT
ACTTACAGTAACTCTGCAAAACTTAAACTCGAAGAAAACGGAAAAATTTT
CACGACCAGCTTACTCGAAACTCTTCTAGAAGAAACAAAATTCTTCCGCG
TCGATTGTCAAGTTTAATACCTCTTGAGATGTGAAAAATTGtttgcatac
acgttttttttttccataagaacaaactatataagaacataaggcttcga
ggcccaaaaatataggaacattctaagaacatactaaggctttggagact
taaaaacatgCAAAATGCTCAAAAAATGCTGAaaataagaacattttaag
aacatttttaggcttcaaatccaaaaaactaagaacatccgaaggcttcg
aaaatttttgacgttcttatataaaaaaaaacgtgtacggaGAAATAATT
ATGTCTATGCAACTTATCATTTAAAGAGTTCAACCATTAATTTTACTCCC
CCGGAAAGCTATGGCCTAACTAACAAGgcgatcttttttaaatatacaaG
AAGGCACACACAATACAACAGCTCACAAGTTTTTTTGCAGACCCAAACTA
CTTTTGAGATTTGGCCTTGCAGTGCTTCAATCGCAGCAGCGAAATCTGAT
CAAACTCAACTTTATACTAAACTATAAGAACCAAGAAAAGCCAAATATCA
atacacaaaaataaatgttaATTTTGTGTCTCGACCTTGATACGTGCTCT
GTTAAAAGCTTATGATGATGATTATCATTTGTTATCTTATGTATTCAGGG
ACTAGCAAAGAACTGATGACGCGGCAAAACCACGCGCATACCTTCACCAT
TCAACGATGCGGTCTTGTGTTTGGCACCATCAACCTATCGAGTGACGAGA
ACTGATATTTACAAGACGTCATAGAATTAACAAGTATATAAAAACTAGTA
AAATTCCATGTTACTTCTGTGGATTCAGAAATATGAAGAGACAGGATACT
GAATAGTGTCAGATTCCATATGTACCTTGAAAGTGTACCGTCAAAAACAT
CTCACTAtgtattgaaaaattaaatcctTCTTTCACATTATGTATCCTTT
actctttataagaaaaattttaccAGAATGAAGCGGctcaaaaatcccaa
aaaaggATAAGTTATCAAATTAATATAGAAAGATATTAAATCCTATAGCT
ATAGTAGATCTGTAGACTCCACAGTAAGGCCAAAAAATAAACATGTTGAG
ACTCTTCAAAAACAAATGAGTATATTTCCAAGAAACATTTTGGGTTCAAC
GCATGCATAGATAGGTTCTCTATCTCCATCAAACAATGCGTCCGCCCTTT
CATAAATAAATCACAATCTCTCACTGCTGAAGATTTGCCTCTTGCGAGTT
ATTTTTATCACACATGCTGATttaaaaatgtgaaacatttgttGTTTTCG
AGTTTGTGGAGGAGTGGAATCCCTGCTCACTATTGTCCACTAAACTATGT
TCACTTAAAATAATTTATCTAAGGATCAGTGATAGTTGAAAcagtgaaat
tattttttcaatactgaCAGTTTGATGTCTTATCCAAACaatcctcagtt
gaaaatatgaattttaaaaaatgtttttagaatttaaaattttgaaatat
tttaagattttttgaaatttgaaatcttaattatttgctttttaattttt
aaaaaattaaataaaatttcacTGTTTCAACTATCATATCACGCTTCTGA
TTCCGATTGGTTAAAAAGCAAAAGTTAAGTAAAAGCATCACATCAAGAGA
ATATAAGAATAAtgataaatttcaaattgtataattgtaacatttttgtg
aattagggaaaaacaaccaaaaatatGAAACTAGTAGGAACCTCGGACCC
CCAAATTTTTTGAGTGAATTAAGAACTTACAAACCAACTTTATTACTTCT
TATAAAGACCTAGTAAATgcctacctacctacctacctaccaCCAACCTC
TATTCGATAAAGAATTCAATTTATGTGCCCCGGATTCAAACTCAGTCAGG
ACAAAAGGTTATTTTTATTATGAAGTGAAAGAAAGAGTTACTAATAATAT
CCATTTATGTCGAAAAAGCTACACTTCCCACTGACTATGTTTTTAACTGA
TCTCTCGACTTTCTAATTATCTAACATCAAATGACCAGCAGATATCGTTT
TCTTTAATAAGCTCACCATGTGTTTTACATTACGCCATAATATCATCGTG
ACGAAAGTTCAAAGTCTAATTGCATTCCATGTATCACCACTATACCAGTA
TACATTGGTCATCAAAGGACGTATCATTGTTTAATGTTGTTCATATTGTT
GTTCTATTCCCTTTTAACACTAGCTCTATTTCAATCAAAGGCATTGTTCC
CCATATCCGCCCTCCTTGGTAACTTTTCCTTTCTTACAATTGTATTTTGT
ACCCTTTATTTTTTActacactgtaaacacctccgccactgtttactccg
ccccgaactaaactcgttttcaaatttatcccgcttCCTGAATTCTTCAC
TTTTTCAGTGAtattgtgtagacgataggatcgtctaccaTGACCTAACC
TTTAATTGCTGATGGAAatgtgaattttcaaatttactgATACCTCTTAT
TGTATACCAAGAAATGCTGTAAGCTTTCAAGTGATCTATACAGTAGCcag
tttatgtatgtgtattTTTCTGTGACGGAGAAGGTAAGGTTCTCAATTGA
CAAGATCCTGActagctgaggacgacggtaaatcagcacttttactgtcc
tcgattttgcgggtcagaagtgcgggtatttccaaatcgcttcagtcact
ctactgtcttcaaaagagcaaatacataaactcgctagtaACCACTACTT
AACGGCCAATCTCTCATATGAAAATGTTCTCCCAACTCAATGACTAGGTT
CACTTTTATATTGACATACAGAGCCTGTCAAATCACATCTTTCTTGCAGA
CTTTCTACTTGGAATTCTACACCATGTGGGACGCTCTTTTGCACAAGGTT
CCAAGTCTAGTTTCCAGGTCTTTATTCTACCAGTCACTGCCTCGTGCCTT
TCTTTATCTGCTCAAAGTTCAACTCAGCTAAGCCTGTCTGATGATATAAT
GAGATcttctttcatattttttaagacttataaataaaactccaaaaagt
atttgatATCATGCTGATAAGAAAAACTGTGATCTGATTAATAGAAGCTG
ACCTTTTGGAAAGAAATCAAAGTCCAACACAGTCTTAATCTTCCTGAGCT
ATAACTGGAATTTTCACTAgtagatttcattgctatatttaaattttgat
acGCAAATGGTAATATAATGATATCTagaaattaaaacatttcaaTATCA
AGACAGCTTGATTACCATTGAGGCTGTCGAAATATCAAGTTTCAATCATG
CGATGTGTAAAAGCAATCCATTTCTATTTCGATGAAAGCAACATAATATG
AGCCAGTATGGTCAACATCTTTATATAATCTTATACAACAAATTGAAATT
GGTTTGTAGCCTCCAGAGCCTCAAAGGTTATGTCAATGATTTTGCACACG
AGCGTTTCCTCGGGAAACTAATTTCTTTAAACACAAAGCTCGACTATTGT
AACATGATCTTCAAAGCAATTTGCATTAGGAAGGAGCTATGAGACAGAAA
ATTTTGGACATCTAGCAGATGTATTGTGACTCATATTTGACTAAAGTTTg
aatttactttaattttttatcCTAATATTTAGCCTCTTGAATATCACGtg
gaaaatggagaaaaatgTTTCCTTGTTGAATAAACTCTCGTACATTGAGC
CAACTTGTTAAATTTTACATATCCTTGtcttaaaatctcaaaatgcTAGT
CACTCGTATGTTGACGATAAGTACCTTTAAATCTATTTTTCAGCATTACG
TAACATAAAACATTGGCCAAGTAATAAAAAAAACCATGTGCAtcaaattt
atcatattttcgAAACGAGGTTCCAGAGGGCTCGTTAAATTGATAGTCAT
gtctataaataaataaaaatgatgtgTCCCTTTGCACCTCTCGTGTACCC
TAACCCTACCTTTCTCTCGTGTTagtcaaacaaacaaacaaacaaacaat
taaGACCTCTGAAGACGTGACGAGTAGTTTACATTCTCGTCCAAACCTTT
CTAACCGCATGTTCTCCACTGAGAATAAAAACACCACAAAAcacgagaaa
tattttaaactttgaacTTTTTAAATTGTACTACATTTTAGACTTTGAAC
TCTA Run BLAST on NCBI protein sequence of TCONS_00052203-protein >TCONS_00052203-protein ID=TCONS_00052203-protein|Name=TCONS_00052203-protein|organism=Clytia hemisphaerica|type=polypeptide|length=422bp
MSSPPTSPPNIQQCECSGCEIDGIKNLNEDFRMTPCPDVTNACKTIRKLL
KKGFVLKPSPQTSKQVREVDYFDEMLSRSELIESLTHTLVLWHPNRTTYI
KFILARYRSCVGVHELYKTHGFYVSDNRSIALLRFKNNKKLSCYFIDFES
FEVKHTDINIEFIDKDMCSIYLYGGSLWIVQNSSDPGVIHVAHIRLKENP
VRCFARQFGTMDYWNPFTPGQVIFTDTDLYHEFLRVTLDTKRTKIIRKYV
STLKNSFLIPVGNRLVNIDYDYKIKEILFQFSSREDKVKTLKTMVLKTTF
ELSKYSFAFSNISNLIVIRLNKKEVVVLDTINCCVVKNIHLNRNYDLNHK
IHFLFSPNGKRVLVLGPVKNTGQHLWTQHLLCSVRTLKMSALRSVRQTFA
IDDLKKCDIPKMLRYELNFGRS Run BLAST on NCBI transcript from alignment at scaffold_213:12290..18593+ Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052203 ID=TCONS_00052203|Name=TCONS_00052203|organism=Clytia hemisphaerica|type=transcript|length=6304bp|location=Sequence derived from alignment at scaffold_213:12290..18593+ (Clytia hemisphaerica)
actttctctgaaaatttcccctaaaaaaggtcaaaatttttccaatctcg
CTCCCCTCCCCCGGAACGAAAACTCGTGGCTACGCCTCTGCTAGGCTTTA
CTCAATCCATCTCGATGAACAATGTCGCAgatttttcttgctcgcttcgc
tcgcatttcctaaatgtttctaaaatgaccTAAATTTTAAGTTCAAATTT
CGGTATACCAATGCGACCAAAAGGGGTGCCAGAATAAGCCTACAAGAAAG
CACCTTAagccaaaattctacttttgctTACCAGCCTGTACCTACCCAAC
ACGCTACAGTTTGGTAATTGTTATAgagaattttggatgatgaaaaaccc
gacctttatcgtccgcacataccaagcacccatttttgcctaagtacccc
ctccgggGGACGAGTAcctaaaaaatggggaaaaattgATCAGTATTGGT
ATTTgaacgaaaataatttttgattttatgattttcttacaaaaattaat
aatccttttttatttacaaaataacTGAAATGAATTATTCAAAATCCTTT
AACAAAAATTCATGATCGTCCAAAGTTTAACTCATAGCGTAACATCTTGG
GGATGTCACACTTCTTGAGATCGTCTATGGCAAATGTTTGTCGTACACTA
CGTAATGCACTCATCTTCAAAGTCCTTACACTACACAGTAAGTGTTGTGT
CCACAAATGCTGACCTGTGTTTTTTACAGGTCCTAAAACAAGAACGCGTT
TGCCATTGGGTGAGAACAGAAAATGAATTTTGTGATTCAAATCATAATTT
CTGTTCAAATGAATGTTCTTGACAACACAGCAGTTGATTGTGTCCAGAAC
AACAACTTCTTTCTTATTCAGTCGAATAACAATCAAATTTGAGATATTGC
TGAACGCGAAAGAGTATTTCGAAAGCTCGAATGTGGTTTTCAAAACCATT
GTTTTCAGTGTTTTCACTTTATCTTCTCttgatgaaaattggaaaagaat
TTCCTTTATTTTATAATCATAATCGATGTTGACCAGACGGTTGCCAACAG
GAATCAAGAACGAATTCTTAAGTGTTGAAACGTATTTGCGGATTATTTTT
GTGCGTTTGGTGTCTAGCGTTACACGGAGAAACTCATGGTATAGATCGGT
ATCGGTGAAAATGACTTGTCCGGGAGTGAACGGGTTCCAGTAGTCCATTG
TACCGAATTGTCGGGCGAAACACCGAACTGGGTTTTCTTTCAATCTAATA
TGTGCCACATGGATGACACCGGGATCTGAAGAATTCTGGACAATCCAGAG
TGAACCACCGTAAAGATAGATAGAGCACATATCTTTATCGATAAACTCGA
TATTAATATCGGTGTGTTTCACTTCGAACGATTCGAAATCGATAAAATAA
CACGataactttttgttgtttttgaaacGGAGGAGTGCGATGGATCGGTT
GTCGGACACATAGAAACCATGTGTTTTATAAAGCTCGTGCACTCCTACGC
AGGAGCGATAACGTGCTAAAATGAACTTGATGTATGTCGTTCGGTTTGGA
TGCCAAAGAACCAAAGTGTGGGTGAGAGATTCGATCAATTCAGAGCGGCT
CAGCATCTCATCAAAATAATCAACTTCTCGAACTTGCTTACTTGTCTGTG
GTGAtggttttaaaacaaaacctttctTCAATAATTTCCGGATTGTTTTG
CAAGCGTTGGTCACATCCGGACATGGTGTCATACGGAAGTCTTCGTTGAG
GTTTTTGATACCATCGATTTCACATCCAGAACATTCGCATTGTTGAATAT
TCGGTGGTGAAGTTGGTGGAGACGACATGTTGACTGGTTTTCTTCGCCAA
GCTCTATATTTTtctgtcttctttttctttttcttattctaaaaaaaaaa
caaataataaaaatttcaaagttcaaagttcaataataattttcaaatat
ttgtattttatatttttttctcagcagataaattttctttttaagtttGC
AAATATTTACTGTGAGTAAACTTTTTGCGCTTAGCTCTACATACAGTTCT
ACTTACAGTAACTCTGCAAAACTTAAACTCGAAGAAAACGGAAAAATTTT
CACGACCAGCTTACTCGAAACTCTTCTAGAAGAAACAAAATTCTTCCGCG
TCGATTGTCAAGTTTAATACCTCTTGAGATGTGAAAAATTGtttgcatac
acgttttttttttccataagaacaaactatataagaacataaggcttcga
ggcccaaaaatataggaacattctaagaacatactaaggctttggagact
taaaaacatgCAAAATGCTCAAAAAATGCTGAaaataagaacattttaag
aacatttttaggcttcaaatccaaaaaactaagaacatccgaaggcttcg
aaaatttttgacgttcttatataaaaaaaaacgtgtacggaGAAATAATT
ATGTCTATGCAACTTATCATTTAAAGAGTTCAACCATTAATTTTACTCCC
CCGGAAAGCTATGGCCTAACTAACAAGgcgatcttttttaaatatacaaG
AAGGCACACACAATACAACAGCTCACAAGTTTTTTTGCAGACCCAAACTA
CTTTTGAGATTTGGCCTTGCAGTGCTTCAATCGCAGCAGCGAAATCTGAT
CAAACTCAACTTTATACTAAACTATAAGAACCAAGAAAAGCCAAATATCA
atacacaaaaataaatgttaATTTTGTGTCTCGACCTTGATACGTGCTCT
GTTAAAAGCTTATGATGATGATTATCATTTGTTATCTTATGTATTCAGGG
ACTAGCAAAGAACTGATGACGCGGCAAAACCACGCGCATACCTTCACCAT
TCAACGATGCGGTCTTGTGTTTGGCACCATCAACCTATCGAGTGACGAGA
ACTGATATTTACAAGACGTCATAGAATTAACAAGTATATAAAAACTAGTA
AAATTCCATGTTACTTCTGTGGATTCAGAAATATGAAGAGACAGGATACT
GAATAGTGTCAGATTCCATATGTACCTTGAAAGTGTACCGTCAAAAACAT
CTCACTAtgtattgaaaaattaaatcctTCTTTCACATTATGTATCCTTT
actctttataagaaaaattttaccAGAATGAAGCGGctcaaaaatcccaa
aaaaggATAAGTTATCAAATTAATATAGAAAGATATTAAATCCTATAGCT
ATAGTAGATCTGTAGACTCCACAGTAAGGCCAAAAAATAAACATGTTGAG
ACTCTTCAAAAACAAATGAGTATATTTCCAAGAAACATTTTGGGTTCAAC
GCATGCATAGATAGGTTCTCTATCTCCATCAAACAATGCGTCCGCCCTTT
CATAAATAAATCACAATCTCTCACTGCTGAAGATTTGCCTCTTGCGAGTT
ATTTTTATCACACATGCTGATttaaaaatgtgaaacatttgttGTTTTCG
AGTTTGTGGAGGAGTGGAATCCCTGCTCACTATTGTCCACTAAACTATGT
TCACTTAAAATAATTTATCTAAGGATCAGTGATAGTTGAAAcagtgaaat
tattttttcaatactgaCAGTTTGATGTCTTATCCAAACaatcctcagtt
gaaaatatgaattttaaaaaatgtttttagaatttaaaattttgaaatat
tttaagattttttgaaatttgaaatcttaattatttgctttttaattttt
aaaaaattaaataaaatttcacTGTTTCAACTATCATATCACGCTTCTGA
TTCCGATTGGTTAAAAAGCAAAAGTTAAGTAAAAGCATCACATCAAGAGA
ATATAAGAATAAtgataaatttcaaattgtataattgtaacatttttgtg
aattagggaaaaacaaccaaaaatatGAAACTAGTAGGAACCTCGGACCC
CCAAATTTTTTGAGTGAATTAAGAACTTACAAACCAACTTTATTACTTCT
TATAAAGACCTAGTAAATgcctacctacctacctacctaccaCCAACCTC
TATTCGATAAAGAATTCAATTTATGTGCCCCGGATTCAAACTCAGTCAGG
ACAAAAGGTTATTTTTATTATGAAGTGAAAGAAAGAGTTACTAATAATAT
CCATTTATGTCGAAAAAGCTACACTTCCCACTGACTATGTTTTTAACTGA
TCTCTCGACTTTCTAATTATCTAACATCAAATGACCAGCAGATATCGTTT
TCTTTAATAAGCTCACCATGTGTTTTACATTACGCCATAATATCATCGTG
ACGAAAGTTCAAAGTCTAATTGCATTCCATGTATCACCACTATACCAGTA
TACATTGGTCATCAAAGGACGTATCATTGTTTAATGTTGTTCATATTGTT
GTTCTATTCCCTTTTAACACTAGCTCTATTTCAATCAAAGGCATTGTTCC
CCATATCCGCCCTCCTTGGTAACTTTTCCTTTCTTACAATTGTATTTTGT
ACCCTTTATTTTTTActacactgtaaacacctccgccactgtttactccg
ccccgaactaaactcgttttcaaatttatcccgcttCCTGAATTCTTCAC
TTTTTCAGTGAtattgtgtagacgataggatcgtctaccaTGACCTAACC
TTTAATTGCTGATGGAAatgtgaattttcaaatttactgATACCTCTTAT
TGTATACCAAGAAATGCTGTAAGCTTTCAAGTGATCTATACAGTAGCcag
tttatgtatgtgtattTTTCTGTGACGGAGAAGGTAAGGTTCTCAATTGA
CAAGATCCTGActagctgaggacgacggtaaatcagcacttttactgtcc
tcgattttgcgggtcagaagtgcgggtatttccaaatcgcttcagtcact
ctactgtcttcaaaagagcaaatacataaactcgctagtaACCACTACTT
AACGGCCAATCTCTCATATGAAAATGTTCTCCCAACTCAATGACTAGGTT
CACTTTTATATTGACATACAGAGCCTGTCAAATCACATCTTTCTTGCAGA
CTTTCTACTTGGAATTCTACACCATGTGGGACGCTCTTTTGCACAAGGTT
CCAAGTCTAGTTTCCAGGTCTTTATTCTACCAGTCACTGCCTCGTGCCTT
TCTTTATCTGCTCAAAGTTCAACTCAGCTAAGCCTGTCTGATGATATAAT
GAGATcttctttcatattttttaagacttataaataaaactccaaaaagt
atttgatATCATGCTGATAAGAAAAACTGTGATCTGATTAATAGAAGCTG
ACCTTTTGGAAAGAAATCAAAGTCCAACACAGTCTTAATCTTCCTGAGCT
ATAACTGGAATTTTCACTAgtagatttcattgctatatttaaattttgat
acGCAAATGGTAATATAATGATATCTagaaattaaaacatttcaaTATCA
AGACAGCTTGATTACCATTGAGGCTGTCGAAATATCAAGTTTCAATCATG
CGATGTGTAAAAGCAATCCATTTCTATTTCGATGAAAGCAACATAATATG
AGCCAGTATGGTCAACATCTTTATATAATCTTATACAACAAATTGAAATT
GGTTTGTAGCCTCCAGAGCCTCAAAGGTTATGTCAATGATTTTGCACACG
AGCGTTTCCTCGGGAAACTAATTTCTTTAAACACAAAGCTCGACTATTGT
AACATGATCTTCAAAGCAATTTGCATTAGGAAGGAGCTATGAGACAGAAA
ATTTTGGACATCTAGCAGATGTATTGTGACTCATATTTGACTAAAGTTTg
aatttactttaattttttatcCTAATATTTAGCCTCTTGAATATCACGtg
gaaaatggagaaaaatgTTTCCTTGTTGAATAAACTCTCGTACATTGAGC
CAACTTGTTAAATTTTACATATCCTTGtcttaaaatctcaaaatgcTAGT
CACTCGTATGTTGACGATAAGTACCTTTAAATCTATTTTTCAGCATTACG
TAACATAAAACATTGGCCAAGTAATAAAAAAAACCATGTGCAtcaaattt
atcatattttcgAAACGAGGTTCCAGAGGGCTCGTTAAATTGATAGTCAT
gtctataaataaataaaaatgatgtgTCCCTTTGCACCTCTCGTGTACCC
TAACCCTACCTTTCTCTCGTGTTagtcaaacaaacaaacaaacaaacaat
taaGACCTCTGAAGACGTGACGAGTAGTTTACATTCTCGTCCAAACCTTT
CTAACCGCATGTTCTCCACTGAGAATAAAAACACCACAAAAcacgagaaa
tattttaaactttgaacTTTTTAAATTGTACTACATTTTAGACTTTGAAC
TCTA Coding sequence (CDS) from alignment at scaffold_213:12290..18593+ >TCONS_00052203 ID=TCONS_00052203|Name=TCONS_00052203|organism=Clytia hemisphaerica|type=CDS|length=1269bp|location=Sequence derived from alignment at scaffold_213:12290..18593+ (Clytia hemisphaerica)
TCATGATCGTCCAAAGTTTAACTCATAGCGTAACATCTTGGGGATGTCAC
ACTTCTTGAGATCGTCTATGGCAAATGTTTGTCGTACACTACGTAATGCA
CTCATCTTCAAAGTCCTTACACTACACAGTAAGTGTTGTGTCCACAAATG
CTGACCTGTGTTTTTTACAGGTCCTAAAACAAGAACGCGTTTGCCATTGG
GTGAGAACAGAAAATGAATTTTGTGATTCAAATCATAATTTCTGTTCAAA
TGAATGTTCTTGACAACACAGCAGTTGATTGTGTCCAGAACAACAACTTC
TTTCTTATTCAGTCGAATAACAATCAAATTTGAGATATTGCTGAACGCGA
AAGAGTATTTCGAAAGCTCGAATGTGGTTTTCAAAACCATTGTTTTCAGT
GTTTTCACTTTATCTTCTCttgatgaaaattggaaaagaatTTCCTTTAT
TTTATAATCATAATCGATGTTGACCAGACGGTTGCCAACAGGAATCAAGA
ACGAATTCTTAAGTGTTGAAACGTATTTGCGGATTATTTTTGTGCGTTTG
GTGTCTAGCGTTACACGGAGAAACTCATGGTATAGATCGGTATCGGTGAA
AATGACTTGTCCGGGAGTGAACGGGTTCCAGTAGTCCATTGTACCGAATT
GTCGGGCGAAACACCGAACTGGGTTTTCTTTCAATCTAATATGTGCCACA
TGGATGACACCGGGATCTGAAGAATTCTGGACAATCCAGAGTGAACCACC
GTAAAGATAGATAGAGCACATATCTTTATCGATAAACTCGATATTAATAT
CGGTGTGTTTCACTTCGAACGATTCGAAATCGATAAAATAACACGataac
tttttgttgtttttgaaacGGAGGAGTGCGATGGATCGGTTGTCGGACAC
ATAGAAACCATGTGTTTTATAAAGCTCGTGCACTCCTACGCAGGAGCGAT
AACGTGCTAAAATGAACTTGATGTATGTCGTTCGGTTTGGATGCCAAAGA
ACCAAAGTGTGGGTGAGAGATTCGATCAATTCAGAGCGGCTCAGCATCTC
ATCAAAATAATCAACTTCTCGAACTTGCTTACTTGTCTGTGGTGAtggtt
ttaaaacaaaacctttctTCAATAATTTCCGGATTGTTTTGCAAGCGTTG
GTCACATCCGGACATGGTGTCATACGGAAGTCTTCGTTGAGGTTTTTGAT
ACCATCGATTTCACATCCAGAACATTCGCATTGTTGAATATTCGGTGGTG
AAGTTGGTGGAGACGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052203-exon-scaffold_213-1491911889:12290..18593 | TCONS_00052203-exon-scaffold_213-1491911889:12290..18593 | Clytia hemisphaerica | exon |
| TCONS_00052203-exon-scaffold_213-1510915933:12290..18593 | TCONS_00052203-exon-scaffold_213-1510915933:12290..18593 | Clytia hemisphaerica | exon |
| TCONS_00052203-exon-scaffold_213-1575043694:12290..18593 | TCONS_00052203-exon-scaffold_213-1575043694:12290..18593 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_213 | supercontig | scaffold_213:12290..18593 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR024048 | VHL_alpha_dom |
Blast
The following BLAST results are available for this feature:
|
