TCONS_00052202 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052202
Unique NameTCONS_00052202
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052202 ID=TCONS_00052202|Name=TCONS_00052202|organism=Clytia hemisphaerica|type=transcript|length=3635bp
GTGAAGAATTGAAGATTTGACAATGCAAAGTAAACGATACAGAAGCTGCT
AAGGAGAATCTATGAACATCAGAATTACTTTCCAGTGAtcaaaaatatga
tattttaaaAGCACCATTTCTTTTGGACGGGACTAGCAAAGAACTGATGA
CGCGGCAAAACCACGCGCATACCTTCACCATTCAACGATGCGGTCTTGTG
TTTGGCACCATCAACCTATCGAGTGACGAGAACTGATATTTACAAGACGT
CATAGAATTAACAAGTATATAAAAACTAGTAAAATTCCATGTTACTTCTG
TGGATTCAGAAATATGAAGAGACAGGATACTGAATAGTGTCAGATTCCAT
ATGTACCTTGAAAGTGTACCGTCAAAAACATCTCACTAtgtattgaaaaa
ttaaatcctTCTTTCACATTATGTATCCTTTactctttataagaaaaatt
ttaccAGAATGAAGCGGctcaaaaatcccaaaaaaggATAAGTTATCAAA
TTAATATAGAAAGATATTAAATCCTATAGCTATAGTAGATCTGTAGACTC
CACAGTAAGGCCAAAAAATAAACATGTTGAGACTCTTCAAAAACAAATGA
GTATATTTCCAAGAAACATTTTGGGTTCAACGCATGCATAGATAGGTTCT
CTATCTCCATCAAACAATGCGTCCGCCCTTTCATAAATAAATCACAATCT
CTCACTGCTGAAGATTTGCCTCTTGCGAGTTATTTTTATCACACATGCTG
ATttaaaaatgtgaaacatttgttGTTTTCGAGTTTGTGGAGGAGTGGAA
TCCCTGCTCACTATTGTCCACTAAACTATGTTCACTTAAAATAATTTATC
TAAGGATCAGTGATAGTTGAAAcagtgaaattattttttcaatactgaCA
GTTTGATGTCTTATCCAAACaatcctcagttgaaaatatgaattttaaaa
aatgtttttagaatttaaaattttgaaatattttaagattttttgaaatt
tgaaatcttaattatttgctttttaatttttaaaaaattaaataaaattt
cacTGTTTCAACTATCATATCACGCTTCTGATTCCGATTGGTTAAAAAGC
AAAAGTTAAGTAAAAGCATCACATCAAGAGAATATAAGAATAAtgataaa
tttcaaattgtataattgtaacatttttgtgaattagggaaaaacaacca
aaaatatGAAACTAGTAGGAACCTCGGACCCCCAAATTTTTTGAGTGAAT
TAAGAACTTACAAACCAACTTTATTACTTCTTATAAAGACCTAGTAAATg
cctacctacctacctacctaccaCCAACCTCTATTCGATAAAGAATTCAA
TTTATGTGCCCCGGATTCAAACTCAGTCAGGACAAAAGGTTATTTTTATT
ATGAAGTGAAAGAAAGAGTTACTAATAATATCCATTTATGTCGAAAAAGC
TACACTTCCCACTGACTATGTTTTTAACTGATCTCTCGACTTTCTAATTA
TCTAACATCAAATGACCAGCAGATATCGTTTTCTTTAATAAGCTCACCAT
GTGTTTTACATTACGCCATAATATCATCGTGACGAAAGTTCAAAGTCTAA
TTGCATTCCATGTATCACCACTATACCAGTATACATTGGTCATCAAAGGA
CGTATCATTGTTTAATGTTGTTCATATTGTTGTTCTATTCCCTTTTAACA
CTAGCTCTATTTCAATCAAAGGCATTGTTCCCCATATCCGCCCTCCTTGG
TAACTTTTCCTTTCTTACAATTGTATTTTGTACCCTTTATTTTTTActac
actgtaaacacctccgccactgtttactccgccccgaactaaactcgttt
tcaaatttatcccgcttCCTGAATTCTTCACTTTTTCAGTGAtattgtgt
agacgataggatcgtctaccaTGACCTAACCTTTAATTGCTGATGGAAat
gtgaattttcaaatttactgATACCTCTTATTGTATACCAAGAAATGCTG
TAAGCTTTCAAGTGATCTATACAGTAGCcagtttatgtatgtgtattTTT
CTGTGACGGAGAAGGTAAGGTTCTCAATTGACAAGATCCTGActagctga
ggacgacggtaaatcagcacttttactgtcctcgattttgcgggtcagaa
gtgcgggtatttccaaatcgcttcagtcactctactgtcttcaaaagagc
aaatacataaactcgctagtaACCACTACTTAACGGCCAATCTCTCATAT
GAAAATGTTCTCCCAACTCAATGACTAGGTTCACTTTTATATTGACATAC
AGAGCCTGTCAAATCACATCTTTCTTGCAGACTTTCTACTTGGAATTCTA
CACCATGTGGGACGCTCTTTTGCACAAGGTTCCAAGTCTAGTTTCCAGGT
CTTTATTCTACCAGTCACTGCCTCGTGCCTTTCTTTATCTGCTCAAAGTT
CAACTCAGCTAAGCCTGTCTGATGATATAATGAGATcttctttcatattt
tttaagacttataaataaaactccaaaaagtatttgatATCATGCTGATA
AGAAAAACTGTGATCTGATTAATAGAAGCTGACCTTTTGGAAAGAAATCA
AAGTCCAACACAGTCTTAATCTTCCTGAGCTATAACTGGAATTTTCACTA
gtagatttcattgctatatttaaattttgatacGCAAATGGTAATATAAT
GATATCTagaaattaaaacatttcaaTATCAAGACAGCTTGATTACCATT
GAGGCTGTCGAAATATCAAGTTTCAATCATGCGATGTGTAAAAGCAATCC
ATTTCTATTTCGATGAAAGCAACATAATATGAGCCAGTATGGTCAACATC
TTTATATAATCTTATACAACAAATTGAAATTGGTTTGTAGCCTCCAGAGC
CTCAAAGGTTATGTCAATGATTTTGCACACGAGCGTTTCCTCGGGAAACT
AATTTCTTTAAACACAAAGCTCGACTATTGTAACATGATCTTCAAAGCAA
TTTGCATTAGGAAGGAGCTATGAGACAGAAAATTTTGGACATCTAGCAGA
TGTATTGTGACTCATATTTGACTAAAGTTTgaatttactttaatttttta
tcCTAATATTTAGCCTCTTGAATATCACGtggaaaatggagaaaaatgTT
TCCTTGTTGAATAAACTCTCGTACATTGAGCCAACTTGTTAAATTTTACA
TATCCTTGtcttaaaatctcaaaatgcTAGTCACTCGTATGTTGACGATA
AGTACCTTTAAATCTATTTTTCAGCATTACGTAACATAAAACATTGGCCA
AGTAATAAAAAAAACCATGTGCAtcaaatttatcatattttcgAAACGAG
GTTCCAGAGGGCTCGTTAAATTGATAGTCATgtctataaataaataaaaa
tgatgtgTCCCTTTGCACCTCTCGTGTACCCTAACCCTACCTTTCTCTCG
TGTTagtcaaacaaacaaacaaacaaacaattaaGACCTCTGAAGACGTG
ACGAGTAGTTTACATTCTCGTCCAAACCTTTCTAACCGCATGTTCTCCAC
TGAGAATAAAAACACCACAAAAcacgagaaatattttaaactttgaacTT
TTTAAATTGTACTACATTTTAGACTTTGAACTCTA
Run BLAST on NCBI

transcript from alignment at scaffold_213:5381..18593+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052202 ID=TCONS_00052202|Name=TCONS_00052202|organism=Clytia hemisphaerica|type=transcript|length=13213bp|location=Sequence derived from alignment at scaffold_213:5381..18593+ (Clytia hemisphaerica)
GTGAAGAATTGAAGATTTGACAATGCAAAGTAAACGATACAGAAGCTGCT
AAGGAGAATCTATGAACATCAGAATTACTTTCCAGTGAtcaaaaatatga
tattttaaaAGCACCATTTCTTTTGGACGGTAAGTcgatttaagattttt
ttgaatttgcaaATTCAAACATTTACGccaattctcaacttcagttgagc
tataatctgagaatgtctgtatgtatgtctgtatgtatgtatgtccgtcc
gaaaactttagggcaggctggacacttcaaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAACTTGTCTGTGGATAGTGACTGTAAAGCTATG
ATGGTAGACTTTAAGAATAGGGATATATGTAAACATTTGTGAACCCAAGA
AAACTTTAATATCttgttaaattttaaaatcaattttcgtataTGATAAA
TTGtgggaaattaatttttcagagCAACGTGTGAACAAAAGCCACTAAAG
GTTTGAGGAACTTTCTCCtaagttatttattttgaaaggctCTTAGGACG
AGGACACTATTCTAACgcacataaaaaaatgaaaaaattaagataaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGtatatttgctacctaa
tactaaatatttgaaatgttacaattgggccttctaataacgggaaaatc
tgaagttgagcccagtgcggtgcgcacgttcgactattattGATAAGACG
TTATTTTTAATGACAATGAGTGAAGAAACGGTcctctattttagtgaaaa
ttcgtcggttctacccctttcgctggacttaaatcgATCTAATCCTTTGC
AACACTTGTCAAACCTTAGCGGCGTGGCCATTTTTGGAGGAACTTATGGT
AATGAAGGGAAATTTCTTTCGACAATGGTATCGAAAACACAAGCGTAGGA
GCGctcttgtttaaaaaatataaggTACCCTTACATTGAAGTGACAAGGC
AACGTTAGTTTAAAAAGCTATTCGAATGCTAGAAAATAGTTCGTACTCAA
CCGTGGAGACTCAGGGAAATTTCTCTCATGTggaatatttttggaaaaaa
actatTTGGTTTGTTTTACGGACAGTCTAAAAATACCACAATGCGCCGAT
CAAAAATTCATTACCAGTCCCTTCAAAAGCCGCGCCGCTAAGGGTTGATA
AGTGTATAGCAAACAAGTCATTTTATAACGAATAAGTCATTTATTTGGAG
GGGGCTTTGTTTTTgtagaaattatattgaaaattaCAATGTGTTAAGTG
CCATTTTGAACCTTTTGAAAACAttgtttgacattttcaaattcCTCTGA
TATCAATAACTAGGCTGATGATTTTACAACGTAAATTGACCTACACCAAT
TTTATAGAAACTGAAACGAAAACTGCAGGGACAGGCATAAAATGATTTTA
CAGATGTTatctaaatttaaaaagaattctGAGAAAGGTTTTGTTAAGAG
GGAGAGCATGTTTTAATTACAGCGTGGATTATTAAATATACTGAAGAGAT
TTCTCTCTGATAACCTGAAAAGGAAGTCCTATTTCGATACTCGCATCCTC
TCGAAATATTTCTTGCGTTTgatattaaattaaattaaaagtaTAGGAGT
TATTATTTTTCCTTCTAAAATATTCTGCTTCATATTTTCAATATAATTGG
ATTGAGAATGATAACACCCACTTGCAGAAAGTACATAAGAGGTATAATTG
CTATTGGTTGTTATAGCATGtgaaatgattttaaaaagaagtTATCGTGT
TTGGTAAAAAGAATATTCAATATAACTTTGAGATGCTAGAATAGCTTTAT
TTTCAAGCTGTAAACATTCTCTGaagaaaattgttgattttatcTTGTTG
ATTGAACTCTGTTGTCATTTAGTATGAAGAATTTGGGTGTTTTGTTCGGC
TTTATGATGCTGTGGCAAACTACCGTAACCTCCTCTCTTAATGTTTTGGG
AATCTTCACCATTTGTGAAAATCATCCAGATCTgaagaacaattttacaa
gacaAGGAGCTATATACCATCAAGCTATTCtcgttttttatgaatataCC
TCCATAGATTATTCAGTAGTTGATGTGTGTTATAATGAGACTGTGTTGTT
GAACTTTCTGATCGATAAAGTGCTGGCTAATACTTCTTATCTTGAAATAG
GGAATGACTCTACTCCTTATAAACATGTCAAAATTGATACGGCTATTTTA
CATGTACCTTTGCATATGTTCAAAATTACTCAAGACATTTTGAGCACTAC
AGATATCATTGTCGTCAAATTCACCAGAGATATTATATTACCGACAAACT
ATGCTGATAGACTTGGTTTTGATGTTACTTTCAActtgatgaaaattgaa
aaagttattCGTCAATATTGGAATGAAGTTATATTGATTGATCTTATAAC
GAGCAAAGAATCAGTATGTATGGAAAAAATTAGTTCGTATCTTAAGGAAG
AAAGAGACATCTGCTACAAAGTTTTGCGAATAAATCCATCAAACTATGCT
CATTTGAAACGGTTTGATGATTTGTTATCAAATGAAAAGAATAATAGATT
GGTGActctttttttccaagcaatGTCCGATGATTTTCAAGTACCATCCT
CTCTCCTGGGCTACTCAAACAAATCGATAATTATTGGTTCAGTTGATGTT
TTGGTCAAAAACGAATCCTTACCGAACAATATCGTCGGAGCACCTTTCAT
CAATATCTTTCGCAAATTATCTCAATATTCTTTTCTGGAACAAATACCAT
CTTTGACTTCAAATCCAGACTATCAAAAGTTTAGATTCGAAATCAGTAAT
TTGGTGGCTTACTTTTTCTTCGCTCTCGATTATATCAAACGCCCTCCTTC
AATGTCTCACCAAGAATACAGAGCAATTTTGAAATCCAATCTCACTAGAA
CAAAAGAGGGAGATTTCTTAGGATTTAAACCAGTCAATGAGAATCGAACC
AAAGAATCTTTGACAAATAATTGTACAGACATCGTATGTAAACCAGGATT
CAGAAAAGTTTTTGGAGTTGTCCCTTTGTCTTTATGGGATGAGGAAGTTG
GATATTTTTGTAAACCCTGTCCTATGGATGAATTCAAATCGACCTACGGT
GACGGTCCTTGTCAATCATGTTATGGATTCTATGTTCCCAACGCTGATCG
AACATCTTGTATAAATCCGTTGAAATCTGCTTATTTAGAAGTTGAAAGGC
GAATTGGTGTTATCCTTATTACTTTGTGTATCATGGGAGCCATTTTCCCA
TTGTCCACTTTATGTGTTTTCCTGAAGAATCGAAAATCACCTATTGTTAT
GCTCTCAGACTCAAAGTTATCGTTCCTTCACCTCTGTTTCCTAGCAACCA
CTTCTATCGTGTTGCCATTGGTTTATTTCGACCAACCAAATGAAGCCAAA
TGTATAACTCGTCTTGGAATCATAGTTTTACTTTATAATAATAGTATCAG
CTTTATTTTCATCAAATGTATGAAACTTTTAAATGCTTTCTCCAGCGATA
TACGAACTACTGGTCGAGATGTGCAGAGAACTTCAATACAGCAAATCTCG
ATTTTTATGATCAACACTTTCCTTGGATTATGCATTTTGGCGATATTACT
ATACAAAAAATTACCAAAGGTGCTCCCAGAAACGAACTTTAAAAGAaagg
aagaaatattttactgCGACAACAATTTGCACTTCAGTGTATTGATAGTA
TACACCATCTGTTTACATTTGGCATGCAGTTACCGAGCTTACCAATATCG
TCACTTGCCAGGATATCTGAGTGAAGCAACCAGTATTGCAATTGGTTCAT
TTGCTGTCACAATCTCCTTCACCGTAATGTATCCTATCAGTCATTTCCAA
AAGAATCAACTTGATGTCTCAGTCGTGCAAATGTTATTTGTGGCTGGAAA
TAATTTgttgatttatttattcatgTATGGCTATAAGATGTATCTGATCA
TCTTTCGACCCAAGAAAAACACGAAAGTTTATTTGAGGAGACTGCAAATA
CAAGCGGCTAAAGAACGTTCACATTTAActgtttcttttaaattcattgA
TACTTCACCGAGACATATNATTGGCCTTTTTTTAgatcggtaaatcggta
ttacagGAAAAAAATGATCGGTACTCGGTATTTCAAAATCATCTCGGTAT
CGGTAAAAGACATCGGTATCAAAGATCATGAGCCATTGCGCCCCAAGACC
AAATTATAtgagataaattttaaaatcttgcaatttttttcgctcgcttc
gctcgcaataaagttcTTTCACATCtaccaatacactcttctccAGATGC
ATAAATAAGCATTgcaggcctcgttttcaaatattGTTGCCTAAGTAATT
CAACGTCATTTGACATGTAATTATCTTTTGTAAATGTGTgtgcttttgtt
ttaaaactggtAACTTCCTTTTGGGAATGCATTTACGTCTAcgtaaattg
aatgttgaataattattctgCTTGCGAACGAGGCCAGCAATGCTTTCTCG
AGAATAGTGTATTTGGCGaacacaaaatttaaaacaaaaaatttattttt
tttgctcgcTCGCACTAGCTTCTTCGATATCTTCTTGATAAGTATCAAAT
TCATGGCGTTTTTAGAGTTTATGTTATTTggttgactttcaaaaattttc
tatttggccaAAGCCTCCTTTACTATTCGAATATATGAACGATATGTTCT
GAGCGCTGATCTACTAAATAATACCTCCCTCATACGTAAATTAGTACAAA
TTAAGGAACACTCAGGAGCGCCGATTTGAAAAATCATTGCTGCAATTTTG
ATAAGGCAAGAGGCTCAGCCAGGGGTCTGCTTGACACGTGAATTACCATT
TTTCTGCcgtgaatacagttgacgctctttaaATTGACGTTCTACTCTTT
GATAAGCTCCCATTTTCGATCCATTGGCGTTTTGACGGGGGGCCACGCCT
CCCCAAGTTGAGCTTTTTTGaacgccaaaatcttgaaattACCCTAAACT
GTAATTGATCGCCCCCcaccaaagaaaaaaataattgaccNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCTTATTCTCGCTAACTTTGAGCTTGCTTAGAGCAAAAATttac
tctgaaaaaactttctctgaaaatttcccctaaaaaaggtcaaaattttt
ccaatctcgCTCCCCTCCCCCGGAACGAAAACTCGTGGCTACGCCTCTGC
TAGGCTTTACTCAATCCATCTCGATGAACAATGTCGCAgatttttcttgc
tcgcttcgctcgcatttcctaaatgtttctaaaatgaccTAAATTTTAAG
TTCAAATTTCGGTATACCAATGCGACCAAAAGGGGTGCCAGAATAAGCCT
ACAAGAAAGCACCTTAagccaaaattctacttttgctTACCAGCCTGTAC
CTACCCAACACGCTACAGTTTGGTAATTGTTATAgagaattttggatgat
gaaaaacccgacctttatcgtccgcacataccaagcacccatttttgcct
aagtaccccctccgggGGACGAGTAcctaaaaaatggggaaaaattgATC
AGTATTGGTATTTgaacgaaaataatttttgattttatgattttcttaca
aaaattaataatccttttttatttacaaaataacTGAAATGAATTATTCA
AAATCCTTTAACAAAAATTCATGATCGTCCAAAGTTTAACTCATAGCGTA
ACATCTTGGGGATGTCACACTTCTTGAGATCGTCTATGGCAAATGTTTGT
CGTACACTACGTAATGCACTCATCTTCAAAGTCCTTACACTACACAGTAA
GTGTTGTGTCCACAAATGCTGACCTGTGTTTTTTACAGGTCCTAAAACAA
GAACGCGTTTGCCATTGGGTGAGAACAGAAAATGAATTTTGTGATTCAAA
TCATAATTTCTGTTCAAATGAATGTTCTTGACAACACAGCAGTTGATTGT
GTCCAGAACAACAACTTCTTTCTTATTCAGTCGAATAACAATCAAATTTG
AGATATTGCTGAACGCGAAAGAGTATTTCGAAAGCTCGAATGTGGTTTTC
AAAACCATTGTTTTCAGTGTTTTCACTTTATCTTCTCttgatgaaaattg
gaaaagaatTTCCTTTATTTTATAATCATAATCGATGTTGACCAGACGGT
TGCCAACAGGAATCAAGAACGAATTCTTAAGTGTTGAAACGTATTTGCGG
ATTATTTTTGTGCGTTTGGTGTCTAGCGTTACACGGAGAAACTCATGGTA
TAGATCGGTATCGGTGAAAATGACTTGTCCGGGAGTGAACGGGTTCCAGT
AGTCCATTGTACCGAATTGTCGGGCGAAACACCGAACTGGGTTTTCTTTC
AATCTAATATGTGCCACATGGATGACACCGGGATCTGAAGAATTCTGGAC
AATCCAGAGTGAACCACCGTAAAGATAGATAGAGCACATATCTTTATCGA
TAAACTCGATATTAATATCGGTGTGTTTCACTTCGAACGATTCGAAATCG
ATAAAATAACACGataactttttgttgtttttgaaacGGAGGAGTGCGAT
GGATCGGTTGTCGGACACATAGAAACCATGTGTTTTATAAAGCTCGTGCA
CTCCTACGCAGGAGCGATAACGTGCTAAAATGAACTTGATGTATGTCGTT
CGGTTTGGATGCCAAAGAACCAAAGTGTGGGTGAGAGATTCGATCAATTC
AGAGCGGCTCAGCATCTCATCAAAATAATCAACTTCTCGAACTTGCTTAC
TTGTCTGTGGTGAtggttttaaaacaaaacctttctTCAATAATTTCCGG
ATTGTTTTGCAAGCGTTGGTCACATCCGGACATGGTGTCATACGGAAGTC
TTCGTTGAGGTTTTTGATACCATCGATTTCACATCCAGAACATTCGCATT
GTTGAATATTCGGTGGTGAAGTTGGTGGAGACGACATGTTGACTGGTTTT
CTTCGCCAAGCTCTATATTTTtctgtcttctttttctttttcttattcta
aaaaaaaaacaaataataaaaatttcaaagttcaaagttcaataataatt
ttcaaatatttgtattttatatttttttctcagcagataaattttctttt
taagtttGCAAATATTTACTGTGAGTAAACTTTTTGCGCTTAGCTCTACA
TACAGTTCTACTTACAGTAACTCTGCAAAACTTAAACTCGAAGAAAACGG
AAAAATTTTCACGACCAGCTTACTCGAAACTCTTCTAGAAGAAACAAAAT
TCTTCCGCGTCGATTGTCAAGTTTAATACCTCTTGAGATGTGAAAAATTG
tttgcatacacgttttttttttccataagaacaaactatataagaacata
aggcttcgaggcccaaaaatataggaacattctaagaacatactaaggct
ttggagacttaaaaacatgCAAAATGCTCAAAAAATGCTGAaaataagaa
cattttaagaacatttttaggcttcaaatccaaaaaactaagaacatccg
aaggcttcgaaaatttttgacgttcttatataaaaaaaaacgtgtacgga
GAAATAATTATGTCTATGCAACTTATCATTTAAAGAGTTCAACCATTAAT
TTTACTCCCCCGGAAAGCTATGGCCTAACTAACAAGgcgatcttttttaa
atatacaaGAAGGCACACACAATACAACAGCTCACAAGTTTTTTTGCAGA
CCCAAACTACTTTTGAGATTTGGCCTTGCAGTGCTTCAATCGCAGCAGCG
AAATCTGATCAAACTCAACTTTATACTAAACTATAAGAACCAAGAAAAGC
CAAATATCAatacacaaaaataaatgttaATTTTGTGTCTCGACCTTGAT
ACGTGCTCTGTTAAAAGCTTATGATGATGATTATCATTTGTTATCTTATG
TATTCAGGGACTAGCAAAGAACTGATGACGCGGCAAAACCACGCGCATAC
CTTCACCATTCAACGATGCGGTCTTGTGTTTGGCACCATCAACCTATCGA
GTGACGAGAACTGATATTTACAAGACGTCATAGAATTAACAAGTATATAA
AAACTAGTAAAATTCCATGTTACTTCTGTGGATTCAGAAATATGAAGAGA
CAGGATACTGAATAGTGTCAGATTCCATATGTACCTTGAAAGTGTACCGT
CAAAAACATCTCACTAtgtattgaaaaattaaatcctTCTTTCACATTAT
GTATCCTTTactctttataagaaaaattttaccAGAATGAAGCGGctcaa
aaatcccaaaaaaggATAAGTTATCAAATTAATATAGAAAGATATTAAAT
CCTATAGCTATAGTAGATCTGTAGACTCCACAGTAAGGCCAAAAAATAAA
CATGTTGAGACTCTTCAAAAACAAATGAGTATATTTCCAAGAAACATTTT
GGGTTCAACGCATGCATAGATAGGTTCTCTATCTCCATCAAACAATGCGT
CCGCCCTTTCATAAATAAATCACAATCTCTCACTGCTGAAGATTTGCCTC
TTGCGAGTTATTTTTATCACACATGCTGATttaaaaatgtgaaacatttg
ttGTTTTCGAGTTTGTGGAGGAGTGGAATCCCTGCTCACTATTGTCCACT
AAACTATGTTCACTTAAAATAATTTATCTAAGGATCAGTGATAGTTGAAA
cagtgaaattattttttcaatactgaCAGTTTGATGTCTTATCCAAACaa
tcctcagttgaaaatatgaattttaaaaaatgtttttagaatttaaaatt
ttgaaatattttaagattttttgaaatttgaaatcttaattatttgcttt
ttaatttttaaaaaattaaataaaatttcacTGTTTCAACTATCATATCA
CGCTTCTGATTCCGATTGGTTAAAAAGCAAAAGTTAAGTAAAAGCATCAC
ATCAAGAGAATATAAGAATAAtgataaatttcaaattgtataattgtaac
atttttgtgaattagggaaaaacaaccaaaaatatGAAACTAGTAGGAAC
CTCGGACCCCCAAATTTTTTGAGTGAATTAAGAACTTACAAACCAACTTT
ATTACTTCTTATAAAGACCTAGTAAATgcctacctacctacctacctacc
aCCAACCTCTATTCGATAAAGAATTCAATTTATGTGCCCCGGATTCAAAC
TCAGTCAGGACAAAAGGTTATTTTTATTATGAAGTGAAAGAAAGAGTTAC
TAATAATATCCATTTATGTCGAAAAAGCTACACTTCCCACTGACTATGTT
TTTAACTGATCTCTCGACTTTCTAATTATCTAACATCAAATGACCAGCAG
ATATCGTTTTCTTTAATAAGCTCACCATGTGTTTTACATTACGCCATAAT
ATCATCGTGACGAAAGTTCAAAGTCTAATTGCATTCCATGTATCACCACT
ATACCAGTATACATTGGTCATCAAAGGACGTATCATTGTTTAATGTTGTT
CATATTGTTGTTCTATTCCCTTTTAACACTAGCTCTATTTCAATCAAAGG
CATTGTTCCCCATATCCGCCCTCCTTGGTAACTTTTCCTTTCTTACAATT
GTATTTTGTACCCTTTATTTTTTActacactgtaaacacctccgccactg
tttactccgccccgaactaaactcgttttcaaatttatcccgcttCCTGA
ATTCTTCACTTTTTCAGTGAtattgtgtagacgataggatcgtctaccaT
GACCTAACCTTTAATTGCTGATGGAAatgtgaattttcaaatttactgAT
ACCTCTTATTGTATACCAAGAAATGCTGTAAGCTTTCAAGTGATCTATAC
AGTAGCcagtttatgtatgtgtattTTTCTGTGACGGAGAAGGTAAGGTT
CTCAATTGACAAGATCCTGActagctgaggacgacggtaaatcagcactt
ttactgtcctcgattttgcgggtcagaagtgcgggtatttccaaatcgct
tcagtcactctactgtcttcaaaagagcaaatacataaactcgctagtaA
CCACTACTTAACGGCCAATCTCTCATATGAAAATGTTCTCCCAACTCAAT
GACTAGGTTCACTTTTATATTGACATACAGAGCCTGTCAAATCACATCTT
TCTTGCAGACTTTCTACTTGGAATTCTACACCATGTGGGACGCTCTTTTG
CACAAGGTTCCAAGTCTAGTTTCCAGGTCTTTATTCTACCAGTCACTGCC
TCGTGCCTTTCTTTATCTGCTCAAAGTTCAACTCAGCTAAGCCTGTCTGA
TGATATAATGAGATcttctttcatattttttaagacttataaataaaact
ccaaaaagtatttgatATCATGCTGATAAGAAAAACTGTGATCTGATTAA
TAGAAGCTGACCTTTTGGAAAGAAATCAAAGTCCAACACAGTCTTAATCT
TCCTGAGCTATAACTGGAATTTTCACTAgtagatttcattgctatattta
aattttgatacGCAAATGGTAATATAATGATATCTagaaattaaaacatt
tcaaTATCAAGACAGCTTGATTACCATTGAGGCTGTCGAAATATCAAGTT
TCAATCATGCGATGTGTAAAAGCAATCCATTTCTATTTCGATGAAAGCAA
CATAATATGAGCCAGTATGGTCAACATCTTTATATAATCTTATACAACAA
ATTGAAATTGGTTTGTAGCCTCCAGAGCCTCAAAGGTTATGTCAATGATT
TTGCACACGAGCGTTTCCTCGGGAAACTAATTTCTTTAAACACAAAGCTC
GACTATTGTAACATGATCTTCAAAGCAATTTGCATTAGGAAGGAGCTATG
AGACAGAAAATTTTGGACATCTAGCAGATGTATTGTGACTCATATTTGAC
TAAAGTTTgaatttactttaattttttatcCTAATATTTAGCCTCTTGAA
TATCACGtggaaaatggagaaaaatgTTTCCTTGTTGAATAAACTCTCGT
ACATTGAGCCAACTTGTTAAATTTTACATATCCTTGtcttaaaatctcaa
aatgcTAGTCACTCGTATGTTGACGATAAGTACCTTTAAATCTATTTTTC
AGCATTACGTAACATAAAACATTGGCCAAGTAATAAAAAAAACCATGTGC
AtcaaatttatcatattttcgAAACGAGGTTCCAGAGGGCTCGTTAAATT
GATAGTCATgtctataaataaataaaaatgatgtgTCCCTTTGCACCTCT
CGTGTACCCTAACCCTACCTTTCTCTCGTGTTagtcaaacaaacaaacaa
acaaacaattaaGACCTCTGAAGACGTGACGAGTAGTTTACATTCTCGTC
CAAACCTTTCTAACCGCATGTTCTCCACTGAGAATAAAAACACCACAAAA
cacgagaaatattttaaactttgaacTTTTTAAATTGTACTACATTTTAG
ACTTTGAACTCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033054XLOC_033054Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052202-exon-scaffold_213-1491911889:5381..5509TCONS_00052202-exon-scaffold_213-1491911889:5381..5509Clytia hemisphaericaexon
TCONS_00052202-exon-scaffold_213-1510915933:5381..5509TCONS_00052202-exon-scaffold_213-1510915933:5381..5509Clytia hemisphaericaexon
TCONS_00052202-exon-scaffold_213-1575043694:5381..5509TCONS_00052202-exon-scaffold_213-1575043694:5381..5509Clytia hemisphaericaexon
TCONS_00052202-exon-scaffold_213-1491911889:15088..18593TCONS_00052202-exon-scaffold_213-1491911889:15088..18593Clytia hemisphaericaexon
TCONS_00052202-exon-scaffold_213-1510915933:15088..18593TCONS_00052202-exon-scaffold_213-1510915933:15088..18593Clytia hemisphaericaexon
TCONS_00052202-exon-scaffold_213-1575043694:15088..18593TCONS_00052202-exon-scaffold_213-1575043694:15088..18593Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:5381..18593 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0367203	0.149738	0.110186	0.127303	0.0476485	0	0	0.0539023	0	0.398675	0.171277	0.180868	0.111388	0.0906737	0.125874	0.108232	0.153945	0.325062	0.256002	0.167985	0	0.159914	0.155881	0.14264	0	0.0696479	0	0.0984006	0.140364
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052202 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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