TCONS_00052179 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052179
Unique NameTCONS_00052179
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2125

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052179 ID=TCONS_00052179|Name=TCONS_00052179|organism=Clytia hemisphaerica|type=transcript|length=2125bp
CTGAAGTATATATTGCAGACtaaatttaaattataaattgtatATGATGC
AAAAGATGTTTGTTTAAATCTTTTCCAAATTACACTCAATGACGACTATT
TATATATCCTGATTGTTTTAATTCCAGATATTTTACTTTAATAAAGCCAA
CTTTACAAGTCTATGTTTTACTGATACTTTTAGTTTTTGGACTTTTCGTT
CGGTAAAGTTCACTTTTCAGAAGAACACGGAGGCGAGggagaaagaaaga
aagtgaaagaagaagaagaagaagaagaagattatTCGAAAGAGCCGCGA
CTCACTCAACGCACGAATTTAAATTTACTTGATAATTTTTTGTGCAAATA
TGGAGGAAGAAACTCAAACGAATGTTGAACAAGAAGTGTCTTCAACAGTT
CCAGAGactgtaacaaaagaaaatatcGAAGATGTCGagacaatgaaaaa
agaaaagaaaacagaaaattgtCAATTCAAAAGCCGACTTGGAATTTATC
TTGTCAAAGCTGATCTTCCTCAACATGTCTTGGATGCAATCTACTGGAAC
AAAATTCCCAAAACTGCTGGGATGTTTGGCGGAATCATGTTTTTGCTTAT
GTCACTCTATTGGTACCCATTCCTCACTGTTGTGACAAATTTCTGTCTTG
CACTGTTAGCTGTTGCCTTTTTATATCGTATTGGAATGACCATTGTCAAT
GCTGTTCAGAAAACTTCACCAGAGCATCCATTtcaaaaattgcTGGAAAA
AGACATCAAAGTTTCTGATGAGAGAGTTGATTCTTTCTCTAAATGCTTGG
CAAAAGAAATCAACTGCACTGTCAAATGTTCGCAAGATTTGTTCCTCGTG
AAAGATGTATTCAAGTCAATGAAGTTTGGAGTTTTATTGTGGTTGTTGTC
TTATGTTGCTTCATGGATCAGTCCATTAACAATGCTCACGCTGTGTGTTC
TTCTTGCCTTTACTGTTCCAAAATTGTATGAAGAAAAATATGTTCAAATT
GATGAGGCTATCAAAAGTGTTACAGTTGCTATTGGAGCAGTGCTTGAAAC
GGCGAAACAAAAGCTTCCACCTTCAGCTCTAAAGTATTTGGGAGTAAATG
aggagaagaaaacaaattgAAACCGTAGGACAACCATATTACCAAATGGA
AGGACTAGTAATTGAAATTTAGGCTCCATTATATTCTGGCACCTGTGACA
GTTTCTCAAAAAGACATTTAGCAAAATCAACATGTTGTTGCATAGAATGA
ATATATTTTACTATAGGTTTTTACAACATTTTTAACAGAGACTAAATCGT
CGTCTTAGTTGACTAATGCTagttctgttttgtttttgtttttgattgta
aAAGTGAATTTGTTCGGTTTTAATACCACGCATGTGCTTTGCTGAGAAAA
TACTTCCACGGGTACGATACATTCCATCTCGTGATAATAAGTGTatggtg
tttttgttttttgctttattttagaaagatttttatttaaaatgaaaatt
aatttttaattttagttcTTAGGCATTTGATGTATTATTTAAATGAGATT
TTAATTTCAGTCATATAGTCTTTAGTCATAGTCATTTTACCATTAACACA
TCATCTAAAGTGCACTTTTTTGTGTATCTCTAGTGTAGATATATCCATAA
AAAGTtacataaaaatttataaagtcaTTATAACTGGACTAAGCACGCTA
AAATGTATTATTGCAAGTATATATtatgacattttaatgaaatttatttg
tttGGGATTTTGCATTTCAACTGTAGTATAAACATTTTTTCGATAATATT
TTTGCAAATTCTTCTTAGAAATCTATTCCATCTTTACAGTCCTTTTGTAA
AACCGGTTGAAGAAAAATGCGccctttttctttttaacttgAACGCACAT
AAACAAAGTCTAGAATTTCTCAAGTTGTTGAATGAAAagtatttgaattt
ttgaatttttaattgTAATAATTTATTCCCAAAGAGTATCATTTAGAAAA
TATATCAGAATTTAGAGCATCTTTCAGTTACAAAATTATGTTGTATGTTG
TGCTTTGATTGTGTTTTTAAACTTTCTatcatataaaaattttgaatgat
taATTTCAGAAGGTTTGAATTACTG
Run BLAST on NCBI

protein sequence of TCONS_00052179-protein

>TCONS_00052179-protein ID=TCONS_00052179-protein|Name=TCONS_00052179-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MEEETQTNVEQEVSSTVPETVTKENIEDVETMKKEKKTENCQFKSRLGIY
LVKADLPQHVLDAIYWNKIPKTAGMFGGIMFLLMSLYWYPFLTVVTNFCL
ALLAVAFLYRIGMTIVNAVQKTSPEHPFQKLLEKDIKVSDERVDSFSKCL
AKEINCTVKCSQDLFLVKDVFKSMKFGVLLWLLSYVASWISPLTMLTLCV
LLAFTVPKLYEEKYVQIDEAIKSVTVAIGAVLETAKQKLPPSALKYLGVN
EEKKTN
Run BLAST on NCBI

transcript from alignment at scaffold_212:71016..84548+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052179 ID=TCONS_00052179|Name=TCONS_00052179|organism=Clytia hemisphaerica|type=transcript|length=13533bp|location=Sequence derived from alignment at scaffold_212:71016..84548+ (Clytia hemisphaerica)
CTGAAGTATATATTGCAGACtaaatttaaattataaattgtatATGATGC
AAAAGATGTTTGTTTAAATCTTTTCCAAATTACACTCAATGACGACTATT
TATATATCCTGATTGTTTTAATTCCAGATATTTTACTTTAATAAAGCCAA
CTTTACAAGTCTATGTTTTACTGATACTTTTAGTTTTTGGACTTTTCGTT
CGGTAAAGTTCACTTTTCAGAAGAACACGGAGGCGAGggagaaagaaaga
aagtgaaagaagaagaagaagaagaagaagattatTCGAAAGAGCCGCGA
CTCACTCAACGCACGAATTTAAATTTACTTGATAATTTTTTGTGCAAATA
TGGAGGAAGAAACTCAAACGAATGTTGAACAAGAAGTGTCTTCAACAGTT
CCAGAGactgtaacaaaagaaaatatcgAAGATGTCGAGACAGNACAAGA
AGTGTCTTCAACAGTTCCAGAGActgtaacaaaagaaaacatcGAAGATG
TCGagacaatgaaaaaagaaaagaaaacaggtATTGTATTTTGTACCAAT
AACTAATTTGTTAAAAtagatcttttttaaaaagaatacaGGATAACTGA
GAAGTTTTTCCAGGGAGTATTGGTCGCAGCGTTTTGGCCCATCAAAATTT
GGGTATATGtcatagtcccgctgctgagatcgaaaaaagtggctagaaaa
caattttcgtgacacacatctccagacggtgtcaatcgaacaacttcgaa
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAtgagggcgcccttttggatctattgttaactcattta
aaatggtggacagagttgcggAATGACGAAGGCGCCCactgcttcgaggg
tggtaacgccaaaacggcCAATATGACCAgtcaacagaaggcgagtttgt
tGCCGCGTGAGNgttcgacaatcgaattgcaattattcgattgcgttcaa
ttgcgttcgattgattcggcgttcgattcgttcgattgacaccgtctgga
catcttagaactaactttttttggtggaaactcacgaattagtattatgt
agattccaaaatcaaaaagtttccacgatattatcgtgcaagtaacgagt
aattggcgattttttgcgtttccaggcaaaattgcaaggcctggaaattc
atatTATTCaatattacaccaaagtcccagcttctctagatcaaaagtta
tgggcctatttgtggtcaaaaaggtgtttaattttgcataaattaatgca
gattgtggggaaattccctgttttccatcagttttttaccacaaatagcc
cagtaaattttgatctagagaagttgggactttggtgtaatacacttttt
tgctcagtttgaagagctctatcatgtgatataggtctttttttaatttg
aagaccccccaaaaatcatttttgaatttccaggccttgcaattttgcct
ggaaacgcaaaaaatcgccaattactcgttacttgcacgataatatcgtg
gaaactttttgattttggaatgtacatatactaattcatgagtttccacc
aaaaaaagttagttctaatatgtgtgtcacgaaatgaaacatttatcgAC
CTCAGCAGCAGGACTATCAGTCAAAGTCACACTagcagtcgggtgtttaa
gataaaaactgcaattattgctcttttcggaaattattgccgaaaacggc
aatttttctaacgatgaaatgctgaatcagcagaaaaataaaaaagtaca
caaatgaaaattgccgaaaacggcaattattgccatttttgcaaataaaa
gttgactttattattgttattgaacacgtggtatttgacacccttgCGAT
AAGTtggcccactgtgcctcgtttagttttgttttcaactggtttttgtt
ggaaatgcagatagcaaaatcaagtcatatgtaaacaaatttaacggggt
tttgttatctctttctggctgtgtttcggcattgATGCAGGATCTTTCAA
CATAATatcattttaaaacttttcatgttattgagcaacgaaaaatttaa
aaaatcacttttaaaaatccgaaaatcctttttctcgatgcaattttact
attttcaaacacctctgacatctttgcccttaaaaggacaaaacattttg
ctgattcagcattttatcgttaaaaaaattgccgttttcggcaataattt
ccgaaaagagcaatattttgcagtttttatctttaaCACCCGACtgacta
gcgtcccgccaaaattcACATCGAAGATTAATGCTGCGGAAGCGCTATAT
CGTTcacttgactcgcaagcaaacaagtgcgccgcaaaacttctaaagga
attcatgaaaaaataacccggcaCTTTTTAATGAAATTAACATTTTCAAA
AACTATGAgaaattgcctaaaatttgagccatagatgaaaagatttgagc
caagccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagat
ctacgagGGAGatggaacccacctagatccatGCACccccggataggcta
tttctctgaaaatttgccggacctcaaacactggaCCAATTTACATGtac
ggaattatttttactttagcgtattaagaaggccttaaaaattgaagcaC
TGTCtagggaattgaatgacaaatttggTTGGTTAATAATCTGGCTGTTG
CACGTTCACAATCGGTCATTTAGCCTCCtttaaagttttcaagttttaat
taattgtcttgggaacttgaaaatgtttatttctataaggaattttataa
cacttcatggcagattaaaaagatgATCAGAAACCGAAAGCTTCTTCGTT
TTTCCTTTTCACAtttcgccgtgtcaattcaagacagccctaagtccatt
ttttccattttgagataattgactttaaaggttTCATTTGCTGATAATTA
AGAAAGAAATAATGCCAAGAGTCCATACTTTTGATATTATGGGGGCATTA
TAGTTATCTTTTTGTGGTTAAAAAGAGGTTTTAATAGCTTGCTCCAGAGG
CTCTAAAATGGCATTTATTGGACTTAAGGCTGTATTGAATTgaacttaaa
atcttcatacttaGCAAGTTTCAAGCTAAAATCGAGCTTTAAAATGCCTC
AAGTCCATTAACCagatgtgttggacttaaggctacacatttcatgtcaa
tgcttcatagaaaaATAACATTTGGACATAAGGCTTCCCAAGACTTTTTA
CCCTAAAATTCAGGACTTAAAgctgtttatggttgatattatggaacatt
ctaaattcttatttttttttgaattgcaaaatacaccACTTTCCTATAAG
AATTCTGTGGATTTGAggccattttttggaaaacgtgcatgctgaaatag
ggggttatggtcttaactcaattttcgaaaaaatggacttaagtctgtct
tgaattgacacggcgattTATggggaaaaataaaatttcagaaGATGTTT
ATTCGATGAGGATTCCCATTTTCCTAAAATCGCAATTCCCCATGGTTGCA
AAATAgtggctatgggtaattcctttgttttttttatattttgttctaTG
TGACGTAAAGAGGCATCACAAATCAAGGTACTTCAACTAACTGACAGATA
GGAATTAGTAGGAAGGTCGGAATGACTGATGGAAACTTTATATACTTACT
TGGAAGTGCTTTTGGTTGTCTTTCTCTAGGTGAGCAATCTAATGTACGCG
CCTGCTTGTTGTTGATTTGATATTTAATTGAGTTGGATGCAGCATTGGTT
TTAAACCCGGGAACACAGGGTTCATCTGGAAAGGGAGCAAGGAACTTTAT
TTTGAAGGTTAGGCGTCAATCACATATAAGTTGTGTTCACATCATTTCCA
GCACCATAAAAGGAGTCagtcggttggtcggtcggCACTAAAATCGTCAG
AAAAGTGCGGCTAGAATTATCAAGCGCACTAACTGCATTATGATCTTTGT
TACATATCACAGTTGCAAAAAAACAGTCGCATCGCGCTTTTTAACGCAaa
taatctttgaaaaattacggaCAGAAAGCTTCTTTGAACTAACACTGGAT
GATCAAATCAGCGACTAACGATGAATGTacaaaatgctttgaaaaatatt
ggttAAAAAATCCGATAGATTTCCGACTTTCCGACTGAAAAgtgtcggat
ttttaagatagaaagtgagtcggtcggacgACGCAAACACAACTTATTCG
TGATCTACGCCTTAGCAAAGGGCATCCACTTaaattcttcaattcttttg
ggAGGGAGTTGAACTAGTTTGCCCATGGGTAGACAAGAAATTATATCGGA
TAGTCTGTAAGACAGCTGATGTTCTTGGATTTTTGGCTTTGACAAAACAA
AATCTGCCAAATCTGGGTTGTTGAAAAATAGATTGTACAGTAATGTTTGG
CACAAGGTTTTCAagtatctgtttttttttgtatctCTTCAAGTCTTAAA
TAAAGCCGACAACACCAGGGCTCCATAGAACTGAGTAGTACTCCAGAATT
AGGATACAAGCGTTTTATATAGAGTAAGTATAGTATGAGATGAGCGGCCC
AAGTGAAGGTTCGTAATATCCAAGAAAtgagattttttgctttttcaatC
TGATTTTTGAAGTGACAATTGTTGGACATTAGAACTCCCAAATCTTTAAC
AAATCTACATCTACACCTTTGATGAGCCTTgtgtcatctgcaaaattttG
TGTGGAAGAGTGTTGAACTTCATAATCAATAATGTCGCCCATTAAGATGT
CGAAAAATTgcaatttcttctattttttgaaatttcaaatggcctttgat
tttcaaaaaaagctggAATCCAACCCTGGGATTACTCAGGGAATGAATAA
CGTATCACATTTTGTGGTTAGCGATACATTTTCGTAAATGTACGAAgcag
aaattcaaaaattctgcaaaatcgGGATGCAACATATGTcatcttctttg
aaaaatgtttagttTAAACAAGTATTTTGAAGCGAATACAACTGTTACTT
TGCTTCCAAATCATCCTTAAAAAGTAGAAAATGCATTGTATATTGATAAA
AGCGCATTGTGAAAGCTAAATAATTTTGAGGCTGTGGCGGGCTTATTTAA
CTTTCCTCGGTTCCCCAAAAAGTCTGACTTTATTTCAAATCGTTTATTTT
ATCCCTGTTACTAAAAAAGCGCAATCGAAAAGAGGCACCAGCTCATCAGC
AGCTGCCATTTGTTTCCATGTGGGTCAAGAATTTTCCAGTACTGTAAAGT
CAGCGCTAAGTCATGTTTTCACCTTCACGTCAAATAGCatcaatatcttt
ggaaagaaaagatatagttaaatgtagtttttttacttgtttccctgata
atttcTGATTAATTGAGAAAAACAATAAACAGATTGGGATGCATTAAAGT
ACTAATGCAGTTAGGTTTAACCGTAGTATACTAAGACCAGAGAATATACT
GCGACCTCTTATAATATACTAAGATATTTGACTTATATCAGGTGGTGGTA
AACTAAGTGGTCGTAGTATGCTAAGAGATTTGATTTCTGAGAATGCTATT
AGCCTGACGTTTTTCTCAGCGAGAAAGTCTTTGTGGGGAGTTTGGGAGTT
aatttagaagtctttttttatttagaattaCTTCTAATCAATCCTACAGG
TCCTTTTTGCAAATAATTTTACTGCATATTTGGGATGGATTTTCAATCAA
TGGGTAGACCAAGAGGGGAGAGTAGTTTGTCCCGGTAGACCTATTCTTTA
CGCTGCAATCCCTACACATTGGTCCCATTCCGGTgtcttttaaagggaca
taaaagtacctagtaaaatgtaaacattgcgcgaactacgtgtcattaaa
aagaacaattaaagTCACATatccaaaacaaacaaaatcagccatatttg
tttttattttttattttggcatgtgacatttgttttgagtTTGTATCCCG
CTACAtatggtttgtttacaaattttgtcagtacttttatgtcccttcac
TGATTAGCACCtaattaattggtcattaagaaACAAAGCAATGGCATGTA
ATTTTTCTAAGGAAACaggaaatttttagatttatagCTGCTTTTACCCT
TAAGGAATAAGAATTTGTTGAGGGCATTTTCCAGTGTTGAGGAGCCTCTG
GAAAGTTTTGTACGTGAATTGAATGTTAAAAAGATGTTATGTCTTAGTAT
ATAAAGTTACGGTAAGATGTTAGTATGCTATGGTTAAACGCGACTGAATG
CATTGAAGTTAATTTTGGTAAATTCTTCTTCATTTCGCTCAAAAAAATCC
TGATGATTGCGCATCCTATCAAACTGGCTGGGTTTTCCACTACAGCTCAT
AAATACTTATGTAATGCTGGCATACCTTGTCTATTGTCTTGTCTAATTCT
GTTATAGCAACTTTCTGGTCTGCCAATGGTCAAGCAAGTATTTGGAGTAG
TTTTTTTAAACTAATCAGCTCTCTCAGAATAAAGtcttatattttgtttt
catagtaaaaacattaaaaataccaGATGGTGGAATTAGACATGGTATGA
CAGCATTACACAAAGATACAGTACACAAGCCAGCTAACCTGCCCTTGTGT
GAAAACAATCTCAACAAActgcaaaacatttttttcttcatggCTTTTTA
ATATCTGGTCTAGAGAAACTGCCACTTGAAGGCAATGGTCAGATAGCATA
GATTCACACATGGATTACTGAAGCtttaaaaataatacaaaatttcaaaa
tgttggtGTCAAAGCTTAGTTGATTTTTCTCAATTTGAGTGTGCTGTTTT
AGAATTTGAACGAAGGAAATTGTCCATAAATCAGGATTACTTTATGTAGA
TAGAATAAGACCTTTTTTACCATTAAACGTCCATACCTTTTGATCTAGga
aagttggtacttttttgtgcagttgtttattttgaagatatccccaaaat
tatgaattttaagACCTTAAAATATTGTCTGAAACTGTCTGAAAATGCCA
AAATACACGAGCTTGAAAACACTCAAATCAGAAACTTCAAAAGAATCACC
AAAACAAACCTTTGAAAACTCAAGCAGATGCTGTTCTGCCTTTCTATAAT
GGGCTGACTGTCTGAAAGTCTTATAAAATCGTTAAGCTTAGTTAGATTAT
TAGGATATCAGATTTAGTGGGCTGAATTTTTACCATGCCTTTTCTAATTG
CTAGATTTGTGCCTGACTTTGAGCGTAATTctaatgaatttttgaaaatg
cagAACACAGATAGGATGCGGGCGTACAGAAGGTCGATATTTATGTACCA
GTCCCGCAAGATGCAGAACACTTAGTAACTATGAATTTGACAAATCTTGT
AAGGCCATTAGTTTCTCAATCGAAAGGGCTGATGTTGTCCTTTGATTAAA
GTGTTTTATATGTGAAATTTTTTATgtgtaaatttttctttcaaaagaaa
aaaaaagatctctCGCAAGTTTGGGGGGATGAAAGCACTCTTTATTTCAC
TTAGGGTAAGTggaagaaagatttacaaaatagaaaagtttctttttggg
gtaaagaatcagttttgtaaatttaaaaaaaaattttgttttgcaagTTT
TTTTACAGAGCCAAatgaatattttatttattgttctTGCTTGACTTTAA
GGATAGGTTCAGAAAGTATGAAGTTATCGAGACCATAATGTAATATTTTT
GCGgataaacaaaatttgaaattattcctTTCTTCCCACTAAATAGCACT
GTACTTTAAAAAGAAGTAATAGACATGAATATCCATGAAtgtgtgaaaaa
ataaaatttttggataGATTTTTTCCCATCTTACAGGTTATAAGATGTTA
AAACTATCAAAATATCATTTATTAGTGCTTGATTGTTGAAAAGGACGGTA
TTTGATTAtagatacaattttttttaaacagaaCACTAAAACCTTTTAGG
GAATTTGAAGAGGACTTACGTTACAGTAACTTTGTAACAGCCAGTAACAG
CCCAAAGAAGAAGTTGTTAATTTACAATAACAACTGTCAAATTATGCTTA
TTAACAGTAACCTGTGCTTATCTGCTGTGGTTTCCTGATATAATTTCAGA
CAAATCATAGAATTGTATTGACTTTGGTAAAgaattttttcttacttttc
atATTGCAATGGAGCAAATGAGATAATTTTCAGGAAATAATTACACACCC
CTTTTTTAGCAAAcagttttttcttctcttttttgttgttttcttctctt
ttcttAGAATGAATTTTCATTATAAATTCTTTGAATGAACCACCTGCTTA
CTAGTGCtttaaatttcttcttttaagttATATTATGTTTTTCCTACTAT
TGATAAAATGGGATTCAAATGAAAAATGTTCTGCTTTTATTTCTATATGT
TTTTgcaaacttttatcaaaaactcCTAAGTTTAGTAGCTTTTATAAAGA
GCTAGAGATAATTCTGCTGAATTTTTAAATGTGATTTGAGTGAATTATGT
CTAAGAGTAAGTAATTTGTATGAGAGATCTTATAGTTttgattattaaaa
aaatgcatCATTCTGATTTAATAAGTTTTATCTATTTCATGTATATAGAT
AAGGGTTAATTATAGCTCCTTGAATGGATCTTTAAGTCTAGGTAGTCAAA
AAGTAAACTAATGAGAAAAGACCAGATTTAGCTCTCGTTGATCAAATTTA
AttcagattttttgtcaaaactttCCGGAACATGAaagaaattttctgaa
aaagggctAAGTTCCTAAATTGCCTCACACAAAATTTAAGATCTTCGATT
TACAactaaagttttgattttgttttattttagaaaattgtCAATTCAAA
AGCCGACTTGGAATTTATCTTGTCAAAGCTGATCTTCCTCAACATGGTAT
GAAATACAACACAATTCCCCTATATTTACGTCTTCAAGTCTCAACAAATG
GCTTCCTCCAACATATTTATCTTTAACTCAAGTTACTTGTTAAATGGAAA
TTTCATTTAtcaatttattcatttttaaattaaatgtCTTGAATTTGGAA
GGAATTCTATTTGAAGCCATTTNAAATTTCATTTAtcaatttattcattt
ttaaattaaatgtCTTGAATTTGGAAGGAATTCTATTTTAAGCCATTTCA
GACTAAATGTGTAAACAAAAGGTCTGAACCCTAGAATATATTTCGGTGCA
CTTTATAAAAACTTTTGTTgctcttttaaaaatttttaaacattcaCTTA
TTTGTTTCATATACAATATAGTCTTGGATGCAATCTACTGGAACAAAATT
CCCAAAACTGCTGGGATGTTTGGCGGAATCATGTTTTTGCTTATGTCACT
CTATTGGTACCCATTCCTCACTGTTGTGACAAATTTCTGTCTTGCACTGT
TAGCTGTTGCCTTTTTATATCGTATTGGAATGACCATTGTCAATGCTGTT
CAGAAAACTTCACCAGAGCATCCATTtcagtaagttttatttttgtcttG
GCTTGGTCTCCTCTTCATATAAATGAAGAAGATCCATAATCCTGGAAAAC
CAAACTGGCTTGAAAAATTATGCCTTTCTTCAATCAAATGTAGATTGACT
TAATGATAGacttttaaaatgtaaacattaacGTCACGAGATCATGATGA
ACCAAAAagcaatttcagaaaaaattgcTATGGGTTGTTcataaatttga
atattttagtCACACAAAACCAAATTGGGACAATGTTTGATGTCTGGTGG
CTTTTCCCTAACTTTATACATCGtttcttttctcatttttttatagaaaa
ttgcTGGAAAAAGACATCAAAGTTTCTGATGAGAGAGTATGGCATATTTT
ATTTCATGgttgttaatttttttacaaCATTATTTAAGTTACTTTCAACT
CTTAGGCCATaaatttgctttttataaaCAGTAATAATCGTTAATAATAC
TCATAAATAACACTATTACTTGCTCTTAGGTTGATTCTTTCTCTAAATGC
TTGGCAAAAGAAATCAACTGCACTGTCAAATGTTCGCAAGATTTGTTCCT
CGTGAAAGATGTATTCAAGTCAATGAAGGTAAAAAGTAATCTAGATATAT
TATTATACAGTTTTCCTTTTCTAGTCAAATTCTTAGTCAAGAAGTAGCTC
TTGAACCAGCTTGAACCACTTTTCGTTTTAGCCAGATTCAAATCTATGAT
CCtttcatggtttcagcccacttttcaggtacaCGCAACGAAACATGGTA
CCCCTGATGATTTAGTTCTCCTTTGccttgagttaggtaccccatTCACC
TAAAAAATCTGGTACCGGGTGAAAATTGAACATATGCATATGTATTGTGT
CAAGATCTGTTACTATGCTCTAAATATGAATGGCAGCCATGGATCAAAAT
AACAATATATAGATTCTACCAAAGTTGAAAATGGAAATCTGGAATGCCGA
ATTGTCTGCGTTTCAATGTGAAAATACTGGGAATTAGCCCCCAGAGTTTC
TATCAGATAAACTGGGTACCCTTAACTAATTGGTAACCTTATCAAATTGC
TAATTTTCAGCTCCCATCTCTCTAACGATTAGTGGCTCCTTTAGAAATCT
GGAGGGTCTGAAACCATGCCTTTTTATCACAGTGTATAATTAAAACGATG
CGTTTAAAGGTTTGGTATTAATTAATCAACCTTTTTCCTCATAGTTTGGA
GTTTTATTGTGGTTGTTGTCTTATGTTGCTTCATGGATCAGTCCATTAAC
AATGCTCACGCTGTGTAAGTGAATTCGAACAGCTCCCACAACAAATGTAC
AAATACTGCAGAATGTTGAAGAAATGATGCTCTTGACCGTACTTTTTATA
CTCTTTTTTTCAATCAAGTTTGTAAAgtcaattttgtgaaaattttgatc
AGGGATATTGGAACAatgaatttagaacgccatcATTGGGAATTATAAGG
TCACAATATTACGAAAACTCAACCATTATTAAACTAACAACCTTCTATTT
TTTAGGTGTTCTTCTTGCCTTTACTGTTCCAAAATTGTATGAAGAAAAAT
ATGtaagttttctttgttttttgtttcGTTTTGGTTGATTTTCTAATGTT
AAAATTGCTCTTCATTCTTGTTAGTTACCATAATCGACAATATTgccaaa
agtttttaaaaggcTAAAGTGTTATatattattcttaaaatttaaaacaa
attttttcccCCAGGTTCAAATTGATGAGGCTATCAAAAGTGTTACAGTT
GCTATTGGAGCAGTGCTTGAAACGTAAGATTTTTAAGTTGATTTCAGTAC
ATACATGGCATGTCCTTTCTGATCTTTATGTTCATTGGGTCACTGATTAT
AAATTTATGAAAACGAAGCTTTTCAAGATGTATCAAGGTCCTCAGTAGAA
AAACAAATCCATAGGTGCATTGAGGATTTCACTCAATACTTTTATACTAA
TACTGGTCGTTAATCTAAAATCCTTTATGCATTACTCTCTTAATTTTATT
TCCTTCAGGGCGAAACAAAAGCTTCCACCTTCAGCTCTAAAGTATTTGGG
AGTAAATGaggagaagaaaacaaattgAAACCGTAGGACAACCATATTAC
CAAATGGAAGGACTAGTAATTGAAATTTAGGCTCCATTATATTCTGGCAC
CTGTGACAGTTTCTCAAAAAGACATTTAGCAAAATCAACATGTTGTTGCA
TAGAATGAATATATTTTACTATAGGTTTTTACAACATTTTTAACAGAGAC
TAAATCGTCGTCTTAGTTGACTAATGCTagttctgttttgtttttgtttt
tgattgtaaAAGTGAATTTGTTCGGTTTTAATACCACGCATGTGCTTTGC
TGAGAAAATACTTCCACGGGTACGATACATTCCATCTCGTGATAATAAGT
GTatggtgtttttgttttttgctttattttagaaagatttttatttaaaa
tgaaaattaatttttaattttagttcTTAGGCATTTGATGTATTATTTAA
ATGAGATTTTAATTTCAGTCATATAGTCTTTAGTCATAGTCATTTTACCA
TTAACACATCATCTAAAGTGCACTTTTTTGTGTATCTCTAGTGTAGATAT
ATCCATAAAAAGTtacataaaaatttataaagtcaTTATAACTGGACTAA
GCACGCTAAAATGTATTATTGCAAGTATATATtatgacattttaatgaaa
tttatttgtttGGGATTTTGCATTTCAACTGTAGTATAAACATTTTTTCG
ATAATATTTTTGCAAATTCTTCTTAGAAATCTATTCCATCTTTACAGTCC
TTTTGTAAAACCGGTTGAAGAAAAATGCGccctttttctttttaacttgA
ACGCACATAAACAAAGTCTAGAATTTCTCAAGTTGTTGAATGAAAagtat
ttgaatttttgaatttttaattgTAATAATTTATTCCCAAAGAGTATCAT
TTAGAAAATATATCAGAATTTAGAGCATCTTTCAGTTACAAAATTATGTT
GTATGTTGTGCTTTGATTGTGTTTTTAAACTTTCTatcatataaaaattt
tgaatgattaATTTCAGAAGGTTTGAATTACTG

Coding sequence (CDS) from alignment at scaffold_212:71016..84548+

>TCONS_00052179 ID=TCONS_00052179|Name=TCONS_00052179|organism=Clytia hemisphaerica|type=CDS|length=7710bp|location=Sequence derived from alignment at scaffold_212:71016..84548+ (Clytia hemisphaerica)
ATGGAGGAAGAAACTCAAACGAATGTTGAACAAGAAGTGTCTTCAACAGT
TCCAGAGactgtaacaaaagaaaatatcGAAGATGTCGagacaatgaaaa
aagaaaagaaaacagaaaattgtCAATTCAAAAGCCGACTTGGAATTTAT
CTTGTCAAAGCTGATCTTCCTCAACATGTCTTGGATGCAATCTACTGGAA
CAAAATTCCCAAAACTGCTGGGATGTTTGGCGGAATCATGTTTTTGCTTA
TGTCACTCTATTGGTACCCATTCCTCACTGTTGTGACAAATTTCTGTCTT
GCACTGTTAGCTGTTGCCTTTTTATATCGTATTGGAATGACCATTGTCAA
TGCTGTTCAGAAAACTTCACCAGAGCATCCATTtcaaaaattgcTGGAAA
AAGACATCAAAGTTTCTGATGAGAGAGTTGATTCTTTCTCTAAATGCTTG
GCAAAAGAAATCAACTGCACTGTCAAATGTTCGCAAGATTTGTTCCTCGT
GAAAGATGTATTCAAGTCAATGAAGTTTGGAGTTTTATTGTGGTTGTTGT
CTTATGTTGCTTCATGGATCAGTCCATTAACAATGCTCACGCTGTGTGTT
CTTCTTGCCTTTACTGTTCCAAAATTGTATGAAGAAAAATATGTTCAAAT
TGATGAGGCTATCAAAAGTGTTACAGTTGCTATTGGAGCAGTGCTTGAAA
CGGCGAAACAAAAGCTTCCACCTTCAGCTCTAAAGTATTTGGGAGTAAAT
GaggagaagaaaacaaattgAATGGAGGAAGAAACTCAAACGAATGTTGA
ACAAGAAGTGTCTTCAACAGTTCCAGAGactgtaacaaaagaaaatatcG
AAGATGTCGagacaatgaaaaaagaaaagaaaacagaaaattgtCAATTC
AAAAGCCGACTTGGAATTTATCTTGTCAAAGCTGATCTTCCTCAACATGT
CTTGGATGCAATCTACTGGAACAAAATTCCCAAAACTGCTGGGATGTTTG
GCGGAATCATGTTTTTGCTTATGTCACTCTATTGGTACCCATTCCTCACT
GTTGTGACAAATTTCTGTCTTGCACTGTTAGCTGTTGCCTTTTTATATCG
TATTGGAATGACCATTGTCAATGCTGTTCAGAAAACTTCACCAGAGCATC
CATTtcaaaaattgcTGGAAAAAGACATCAAAGTTTCTGATGAGAGAGTT
GATTCTTTCTCTAAATGCTTGGCAAAAGAAATCAACTGCACTGTCAAATG
TTCGCAAGATTTGTTCCTCGTGAAAGATGTATTCAAGTCAATGAAGTTTG
GAGTTTTATTGTGGTTGTTGTCTTATGTTGCTTCATGGATCAGTCCATTA
ACAATGCTCACGCTGTGTGTTCTTCTTGCCTTTACTGTTCCAAAATTGTA
TGAAGAAAAATATGTTCAAATTGATGAGGCTATCAAAAGTGTTACAGTTG
CTATTGGAGCAGTGCTTGAAACGGCGAAACAAAAGCTTCCACCTTCAGCT
CTAAAGTATTTGGGAGTAAATGaggagaagaaaacaaattgAATGGAGGA
AGAAACTCAAACGAATGTTGAACAAGAAGTGTCTTCAACAGTTCCAGAGa
ctgtaacaaaagaaaatatcGAAGATGTCGagacaatgaaaaaagaaaag
aaaacagaaaattgtCAATTCAAAAGCCGACTTGGAATTTATCTTGTCAA
AGCTGATCTTCCTCAACATGTCTTGGATGCAATCTACTGGAACAAAATTC
CCAAAACTGCTGGGATGTTTGGCGGAATCATGTTTTTGCTTATGTCACTC
TATTGGTACCCATTCCTCACTGTTGTGACAAATTTCTGTCTTGCACTGTT
AGCTGTTGCCTTTTTATATCGTATTGGAATGACCATTGTCAATGCTGTTC
AGAAAACTTCACCAGAGCATCCATTtcaaaaattgcTGGAAAAAGACATC
AAAGTTTCTGATGAGAGAGTTGATTCTTTCTCTAAATGCTTGGCAAAAGA
AATCAACTGCACTGTCAAATGTTCGCAAGATTTGTTCCTCGTGAAAGATG
TATTCAAGTCAATGAAGTTTGGAGTTTTATTGTGGTTGTTGTCTTATGTT
GCTTCATGGATCAGTCCATTAACAATGCTCACGCTGTGTGTTCTTCTTGC
CTTTACTGTTCCAAAATTGTATGAAGAAAAATATGTTCAAATTGATGAGG
CTATCAAAAGTGTTACAGTTGCTATTGGAGCAGTGCTTGAAACGGCGAAA
CAAAAGCTTCCACCTTCAGCTCTAAAGTATTTGGGAGTAAATGaggagaa
gaaaacaaattgAATGGAGGAAGAAACTCAAACGAATGTTGAACAAGAAG
TGTCTTCAACAGTTCCAGAGactgtaacaaaagaaaatatcGAAGATGTC
GagacaatgaaaaaagaaaagaaaacagaaaattgtCAATTCAAAAGCCG
ACTTGGAATTTATCTTGTCAAAGCTGATCTTCCTCAACATGTCTTGGATG
CAATCTACTGGAACAAAATTCCCAAAACTGCTGGGATGTTTGGCGGAATC
ATGTTTTTGCTTATGTCACTCTATTGGTACCCATTCCTCACTGTTGTGAC
AAATTTCTGTCTTGCACTGTTAGCTGTTGCCTTTTTATATCGTATTGGAA
TGACCATTGTCAATGCTGTTCAGAAAACTTCACCAGAGCATCCATTtcaa
aaattgcTGGAAAAAGACATCAAAGTTTCTGATGAGAGAGTTGATTCTTT
CTCTAAATGCTTGGCAAAAGAAATCAACTGCACTGTCAAATGTTCGCAAG
ATTTGTTCCTCGTGAAAGATGTATTCAAGTCAATGAAGTTTGGAGTTTTA
TTGTGGTTGTTGTCTTATGTTGCTTCATGGATCAGTCCATTAACAATGCT
CACGCTGTGTGTTCTTCTTGCCTTTACTGTTCCAAAATTGTATGAAGAAA
AATATGTTCAAATTGATGAGGCTATCAAAAGTGTTACAGTTGCTATTGGA
GCAGTGCTTGAAACGGCGAAACAAAAGCTTCCACCTTCAGCTCTAAAGTA
TTTGGGAGTAAATGaggagaagaaaacaaattgAATGGAGGAAGAAACTC
AAACGAATGTTGAACAAGAAGTGTCTTCAACAGTTCCAGAGactgtaaca
aaagaaaatatcGAAGATGTCGagacaatgaaaaaagaaaagaaaacaga
aaattgtCAATTCAAAAGCCGACTTGGAATTTATCTTGTCAAAGCTGATC
TTCCTCAACATGTCTTGGATGCAATCTACTGGAACAAAATTCCCAAAACT
GCTGGGATGTTTGGCGGAATCATGTTTTTGCTTATGTCACTCTATTGGTA
CCCATTCCTCACTGTTGTGACAAATTTCTGTCTTGCACTGTTAGCTGTTG
CCTTTTTATATCGTATTGGAATGACCATTGTCAATGCTGTTCAGAAAACT
TCACCAGAGCATCCATTtcaaaaattgcTGGAAAAAGACATCAAAGTTTC
TGATGAGAGAGTTGATTCTTTCTCTAAATGCTTGGCAAAAGAAATCAACT
GCACTGTCAAATGTTCGCAAGATTTGTTCCTCGTGAAAGATGTATTCAAG
TCAATGAAGTTTGGAGTTTTATTGTGGTTGTTGTCTTATGTTGCTTCATG
GATCAGTCCATTAACAATGCTCACGCTGTGTGTTCTTCTTGCCTTTACTG
TTCCAAAATTGTATGAAGAAAAATATGTTCAAATTGATGAGGCTATCAAA
AGTGTTACAGTTGCTATTGGAGCAGTGCTTGAAACGGCGAAACAAAAGCT
TCCACCTTCAGCTCTAAAGTATTTGGGAGTAAATGaggagaagaaaacaa
attgAATGGAGGAAGAAACTCAAACGAATGTTGAACAAGAAGTGTCTTCA
ACAGTTCCAGAGactgtaacaaaagaaaatatcGAAGATGTCGagacaat
gaaaaaagaaaagaaaacagaaaattgtCAATTCAAAAGCCGACTTGGAA
TTTATCTTGTCAAAGCTGATCTTCCTCAACATGTCTTGGATGCAATCTAC
TGGAACAAAATTCCCAAAACTGCTGGGATGTTTGGCGGAATCATGTTTTT
GCTTATGTCACTCTATTGGTACCCATTCCTCACTGTTGTGACAAATTTCT
GTCTTGCACTGTTAGCTGTTGCCTTTTTATATCGTATTGGAATGACCATT
GTCAATGCTGTTCAGAAAACTTCACCAGAGCATCCATTtcaaaaattgcT
GGAAAAAGACATCAAAGTTTCTGATGAGAGAGTTGATTCTTTCTCTAAAT
GCTTGGCAAAAGAAATCAACTGCACTGTCAAATGTTCGCAAGATTTGTTC
CTCGTGAAAGATGTATTCAAGTCAATGAAGTTTGGAGTTTTATTGTGGTT
GTTGTCTTATGTTGCTTCATGGATCAGTCCATTAACAATGCTCACGCTGT
GTGTTCTTCTTGCCTTTACTGTTCCAAAATTGTATGAAGAAAAATATGTT
CAAATTGATGAGGCTATCAAAAGTGTTACAGTTGCTATTGGAGCAGTGCT
TGAAACGGCGAAACAAAAGCTTCCACCTTCAGCTCTAAAGTATTTGGGAG
TAAATGaggagaagaaaacaaattgAATGGAGGAAGAAACTCAAACGAAT
GTTGAACAAGAAGTGTCTTCAACAGTTCCAGAGactgtaacaaaagaaaa
tatcGAAGATGTCGagacaatgaaaaaagaaaagaaaacagaaaattgtC
AATTCAAAAGCCGACTTGGAATTTATCTTGTCAAAGCTGATCTTCCTCAA
CATGTCTTGGATGCAATCTACTGGAACAAAATTCCCAAAACTGCTGGGAT
GTTTGGCGGAATCATGTTTTTGCTTATGTCACTCTATTGGTACCCATTCC
TCACTGTTGTGACAAATTTCTGTCTTGCACTGTTAGCTGTTGCCTTTTTA
TATCGTATTGGAATGACCATTGTCAATGCTGTTCAGAAAACTTCACCAGA
GCATCCATTtcaaaaattgcTGGAAAAAGACATCAAAGTTTCTGATGAGA
GAGTTGATTCTTTCTCTAAATGCTTGGCAAAAGAAATCAACTGCACTGTC
AAATGTTCGCAAGATTTGTTCCTCGTGAAAGATGTATTCAAGTCAATGAA
GTTTGGAGTTTTATTGTGGTTGTTGTCTTATGTTGCTTCATGGATCAGTC
CATTAACAATGCTCACGCTGTGTGTTCTTCTTGCCTTTACTGTTCCAAAA
TTGTATGAAGAAAAATATGTTCAAATTGATGAGGCTATCAAAAGTGTTAC
AGTTGCTATTGGAGCAGTGCTTGAAACGGCGAAACAAAAGCTTCCACCTT
CAGCTCTAAAGTATTTGGGAGTAAATGaggagaagaaaacaaattgAATG
GAGGAAGAAACTCAAACGAATGTTGAACAAGAAGTGTCTTCAACAGTTCC
AGAGactgtaacaaaagaaaatatcGAAGATGTCGagacaatgaaaaaag
aaaagaaaacagaaaattgtCAATTCAAAAGCCGACTTGGAATTTATCTT
GTCAAAGCTGATCTTCCTCAACATGTCTTGGATGCAATCTACTGGAACAA
AATTCCCAAAACTGCTGGGATGTTTGGCGGAATCATGTTTTTGCTTATGT
CACTCTATTGGTACCCATTCCTCACTGTTGTGACAAATTTCTGTCTTGCA
CTGTTAGCTGTTGCCTTTTTATATCGTATTGGAATGACCATTGTCAATGC
TGTTCAGAAAACTTCACCAGAGCATCCATTtcaaaaattgcTGGAAAAAG
ACATCAAAGTTTCTGATGAGAGAGTTGATTCTTTCTCTAAATGCTTGGCA
AAAGAAATCAACTGCACTGTCAAATGTTCGCAAGATTTGTTCCTCGTGAA
AGATGTATTCAAGTCAATGAAGTTTGGAGTTTTATTGTGGTTGTTGTCTT
ATGTTGCTTCATGGATCAGTCCATTAACAATGCTCACGCTGTGTGTTCTT
CTTGCCTTTACTGTTCCAAAATTGTATGAAGAAAAATATGTTCAAATTGA
TGAGGCTATCAAAAGTGTTACAGTTGCTATTGGAGCAGTGCTTGAAACGG
CGAAACAAAAGCTTCCACCTTCAGCTCTAAAGTATTTGGGAGTAAATGag
gagaagaaaacaaattgAATGGAGGAAGAAACTCAAACGAATGTTGAACA
AGAAGTGTCTTCAACAGTTCCAGAGactgtaacaaaagaaaatatcGAAG
ATGTCGagacaatgaaaaaagaaaagaaaacagaaaattgtCAATTCAAA
AGCCGACTTGGAATTTATCTTGTCAAAGCTGATCTTCCTCAACATGTCTT
GGATGCAATCTACTGGAACAAAATTCCCAAAACTGCTGGGATGTTTGGCG
GAATCATGTTTTTGCTTATGTCACTCTATTGGTACCCATTCCTCACTGTT
GTGACAAATTTCTGTCTTGCACTGTTAGCTGTTGCCTTTTTATATCGTAT
TGGAATGACCATTGTCAATGCTGTTCAGAAAACTTCACCAGAGCATCCAT
TtcaaaaattgcTGGAAAAAGACATCAAAGTTTCTGATGAGAGAGTTGAT
TCTTTCTCTAAATGCTTGGCAAAAGAAATCAACTGCACTGTCAAATGTTC
GCAAGATTTGTTCCTCGTGAAAGATGTATTCAAGTCAATGAAGTTTGGAG
TTTTATTGTGGTTGTTGTCTTATGTTGCTTCATGGATCAGTCCATTAACA
ATGCTCACGCTGTGTGTTCTTCTTGCCTTTACTGTTCCAAAATTGTATGA
AGAAAAATATGTTCAAATTGATGAGGCTATCAAAAGTGTTACAGTTGCTA
TTGGAGCAGTGCTTGAAACGGCGAAACAAAAGCTTCCACCTTCAGCTCTA
AAGTATTTGGGAGTAAATGaggagaagaaaacaaattgAATGGAGGAAGA
AACTCAAACGAATGTTGAACAAGAAGTGTCTTCAACAGTTCCAGAGactg
taacaaaagaaaatatcGAAGATGTCGagacaatgaaaaaagaaaagaaa
acagaaaattgtCAATTCAAAAGCCGACTTGGAATTTATCTTGTCAAAGC
TGATCTTCCTCAACATGTCTTGGATGCAATCTACTGGAACAAAATTCCCA
AAACTGCTGGGATGTTTGGCGGAATCATGTTTTTGCTTATGTCACTCTAT
TGGTACCCATTCCTCACTGTTGTGACAAATTTCTGTCTTGCACTGTTAGC
TGTTGCCTTTTTATATCGTATTGGAATGACCATTGTCAATGCTGTTCAGA
AAACTTCACCAGAGCATCCATTtcaaaaattgcTGGAAAAAGACATCAAA
GTTTCTGATGAGAGAGTTGATTCTTTCTCTAAATGCTTGGCAAAAGAAAT
CAACTGCACTGTCAAATGTTCGCAAGATTTGTTCCTCGTGAAAGATGTAT
TCAAGTCAATGAAGTTTGGAGTTTTATTGTGGTTGTTGTCTTATGTTGCT
TCATGGATCAGTCCATTAACAATGCTCACGCTGTGTGTTCTTCTTGCCTT
TACTGTTCCAAAATTGTATGAAGAAAAATATGTTCAAATTGATGAGGCTA
TCAAAAGTGTTACAGTTGCTATTGGAGCAGTGCTTGAAACGGCGAAACAA
AAGCTTCCACCTTCAGCTCTAAAGTATTTGGGAGTAAATGaggagaagaa
aacaaattgA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033042XLOC_033042Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052179-proteinTCONS_00052179-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052179-exon-scaffold_212-1491911889:71016..71439TCONS_00052179-exon-scaffold_212-1491911889:71016..71439Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:71016..71439TCONS_00052179-exon-scaffold_212-1510915933:71016..71439Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:71016..71439TCONS_00052179-exon-scaffold_212-1575043694:71016..71439Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:71506..71545TCONS_00052179-exon-scaffold_212-1491911889:71506..71545Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:71506..71545TCONS_00052179-exon-scaffold_212-1510915933:71506..71545Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:71506..71545TCONS_00052179-exon-scaffold_212-1575043694:71506..71545Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:80799..80861TCONS_00052179-exon-scaffold_212-1491911889:80799..80861Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:80799..80861TCONS_00052179-exon-scaffold_212-1510915933:80799..80861Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:80799..80861TCONS_00052179-exon-scaffold_212-1575043694:80799..80861Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:81237..81444TCONS_00052179-exon-scaffold_212-1491911889:81237..81444Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:81237..81444TCONS_00052179-exon-scaffold_212-1510915933:81237..81444Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:81237..81444TCONS_00052179-exon-scaffold_212-1575043694:81237..81444Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:81762..81801TCONS_00052179-exon-scaffold_212-1491911889:81762..81801Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:81762..81801TCONS_00052179-exon-scaffold_212-1510915933:81762..81801Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:81762..81801TCONS_00052179-exon-scaffold_212-1575043694:81762..81801Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:81945..82043TCONS_00052179-exon-scaffold_212-1491911889:81945..82043Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:81945..82043TCONS_00052179-exon-scaffold_212-1510915933:81945..82043Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:81945..82043TCONS_00052179-exon-scaffold_212-1575043694:81945..82043Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:82660..82729TCONS_00052179-exon-scaffold_212-1491911889:82660..82729Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:82660..82729TCONS_00052179-exon-scaffold_212-1510915933:82660..82729Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:82660..82729TCONS_00052179-exon-scaffold_212-1575043694:82660..82729Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:82971..83017TCONS_00052179-exon-scaffold_212-1491911889:82971..83017Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:82971..83017TCONS_00052179-exon-scaffold_212-1510915933:82971..83017Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:82971..83017TCONS_00052179-exon-scaffold_212-1575043694:82971..83017Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:83180..83238TCONS_00052179-exon-scaffold_212-1491911889:83180..83238Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:83180..83238TCONS_00052179-exon-scaffold_212-1510915933:83180..83238Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:83180..83238TCONS_00052179-exon-scaffold_212-1575043694:83180..83238Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1491911889:83474..84548TCONS_00052179-exon-scaffold_212-1491911889:83474..84548Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1510915933:83474..84548TCONS_00052179-exon-scaffold_212-1510915933:83474..84548Clytia hemisphaericaexon
TCONS_00052179-exon-scaffold_212-1575043694:83474..84548TCONS_00052179-exon-scaffold_212-1575043694:83474..84548Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_212supercontigscaffold_212:71016..84548 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.55508	3.13116	0.00131445	0.0011677	13.9586	11.3854	49.0403	52.3518	43.1896	35.5828	47.7248	37.2444	29.9062	19.37	30.2951	33.9319	39.1401	43.265	13.7127	22.7618	48.6381	43.6836	39.4983	45.169	36.7589	46.2377	37.542	28.5148	71.0686	58.1272
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
Blast
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BLAST of TCONS_00052179 vs. Swiss-Prot (Human)
Match: RTN4 (Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.635e-31
Identity = 63/159 (39.62%), Postives = 98/159 (61.64%), Query Frame = 2 
Query:  527 VLDAIYWNKIPKTAGMFGGIMFLLMSLYWYPFLTVVTNFCLALLAVAFLYRIGMTIVNAVQKTSPEHPFQKLLEKDIKVSDERVDSFSKCLAKEINCTVKCSQDLFLVKDVFKSMKFGVLLWLLSYVASWISPLTMLTLCVLLAFTVPKLYEEKYVQID 1003
            V+D +YW  I KT  +FG  +FLL+SL  +  ++V     LALL+V   +RI   ++ A+QK+   HPF+  LE ++ +S+E V  +S      +NCT+K  + LFLV D+  S+KF VL+W+ +YV +  + LT+L L ++  F+VP +YE    QID
Sbjct: 1005 VVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQID 1163
The following BLAST results are available for this feature:
BLAST of TCONS_00052179 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RTN41.635e-3139.62Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2[more]
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