TCONS_00052069 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052069
Unique NameTCONS_00052069
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1023

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052069 ID=TCONS_00052069|Name=TCONS_00052069|organism=Clytia hemisphaerica|type=transcript|length=1023bp
GTTTAATTTCTacactaaaatagattttttattttaaTTTTGTTGCCGAG
CATTATGGCTCACTCCTGGATGTCGTGTCCACCGTCATTCAATCCATCGA
TTGGACGTGGTGGCATCATTGGTGCCGTCTGTGAAGCTGAATGGGGAACC
ACTCCGGTGACAGAGGTCGAAGCTGGTGATCGATTGAAAGTCGGATGGGT
TTCCAACAACCACGGTGGTGGTTACGCAAGAATCTCTTTAGTACCATGGG
GCCAAAGGAAAAGTGCACAAGCCTACAAAGATAACGTGATGAAATTTGCT
TGTTATGGACATGACGAAAGACCAGGCAAATTTCAATACGGAGATTGTAA
ACATCCATGTAATGGAAGACCTGGCTGTGAATACCAAGCTGACCCAGAAG
ATGTTGAGCGTTTCGACACCACTATTGGGATTCCAACCAACCTTGCTGAT
GGTTATTATTCACTCCAAGTCTCAATGTTGGTTGGTAATGGTGGTGTCTA
TAACAGCTGTGGTAAAATAAAGGTCACCGGTGGAAACCCTTCTTACAACT
GTTGGTCAAGTAACAGACCAGTGACTAATAAATGTTTAAGATCTGGTGGA
CCAGCAAGATCAGTTATCGAATCAGGAACGAAACGTGGCGATTTTTGTTA
CGGTCTTGATGGCTCCATTGGAACCGTCGATGATAACATTTCAGACGTCC
CCATCAATGTGGAATGTGACCCCCGTGTTGCGTGCAGCCAATCAACAAAC
ACTGCTCTATGTTACCGTGATTTCCCTTCAATGGCTAAAATCATGACTGC
CTCAAGAAATCCCCGTCAACCAAATTGTAGATCCTACAACACATTACCCG
TCATctccaaataaaaatgaaaataacgaTGGTGGAcgtaatatttattt
atttaaatttaaaattttgaaactgttgTAGTTAAGTATCTTCTTTACCA
TAAACTATGGAAGGATAATCTGTAATCTGTTTGCAACCTAAAAActtatt
tatttcttgacatTAAAATTTTC
Run BLAST on NCBI

protein sequence of TCONS_00052069-protein

>TCONS_00052069-protein ID=TCONS_00052069-protein|Name=TCONS_00052069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=269bp
MAHSWMSCPPSFNPSIGRGGIIGAVCEAEWGTTPVTEVEAGDRLKVGWVS
NNHGGGYARISLVPWGQRKSAQAYKDNVMKFACYGHDERPGKFQYGDCKH
PCNGRPGCEYQADPEDVERFDTTIGIPTNLADGYYSLQVSMLVGNGGVYN
SCGKIKVTGGNPSYNCWSSNRPVTNKCLRSGGPARSVIESGTKRGDFCYG
LDGSIGTVDDNISDVPINVECDPRVACSQSTNTALCYRDFPSMAKIMTAS
RNPRQPNCRSYNTLPVISK
Run BLAST on NCBI

transcript from alignment at scaffold_21:95725..101772+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052069 ID=TCONS_00052069|Name=TCONS_00052069|organism=Clytia hemisphaerica|type=transcript|length=6048bp|location=Sequence derived from alignment at scaffold_21:95725..101772+ (Clytia hemisphaerica)
GTTTAATTTCTacactaaaatagattttttattttaagtacGCTCTTCTT CTGAGTGTCTTTCATACAAGGAATTCGTCACGATCTCGCATCTATTTGTC ACCGAGTCTCTTCCTTCCTGAATTAGGGTTAGCAATTGCATTGAAAAGTA TAAAAGGATCATGAAATTGATCAAATCTTCAGAATCGCAGTTTACAAATT CTTGTAAACTTGGATCTAAAAGCGTGTTTTCAAAGGGCTTTTTGGTATTT ATTGTACATTATACTTTGGTGTTGAAATTTGTCTTGTTAAGAAAGTgcaa aacttttcgaaaaaagatttaattttgacaaatatGGTAGCTTTAGCTGT GTTATTTATAGTTTTGTTGCCGAGCATTATGGCTCACTCCTGGATGTCGT GTCCACCGTAAGTATTTTTTGCACACCACCTGTCTAAACCAGTTTCGCAT TTGAGCTTGATTCCTTTGGCTGCCATTATTTCAATTCGCAACCTGATTCC GATATTTTGACTCACTGGAATGATAGATCAGGCAGGGGGTGTTTATACCT GTGGATAgatctatgaaaaaaaatttcaactatAACTGGACTTGCTTTGC TTTATGCCATATCATATACTTGCATTTGAAGTTTATACTTCTCATTCTTA AACAATCTTTTAAAGGTTTTCACGGGGTCTACACTCAGCTGAAGCAGCTA TCTATGAACTTAGTGGGACATAGGAAGCAATGGGGCTCGGTACCGGGAAC CCATGGTTTTAACTGGCACTTAGAACACTTGATCGAAGCTGCTCTTTATT ATTCGCAAATTAATAAATCTTCAAATTAACTTATtcataatgggcttttc caaaggaatcgtgcaccccctgttgaagaggtccatttccgttccaaggg ggtaaggtttgaattGCAGTAGAATTCCATAAGGTTAGaagaaaatccgt caaaaataagcggaattccaaggggataatgattgaaaatttgtaaaaat tcgaaattccagaggggtatgatcctataattgcctggaattccaagggg gtaggtcacaaaaggttggacctcctcaacagggggtgcacggttttttt ctggaaaagcccaatcaaaGAATGAACTCCCGTAATACAGGACCGGATCT AAGAGGAtccaaaatttacaaaagagAGTCTCCATTTCCTTATAAGGATT TATTTTACACTTTGTCATGAATTTTGAGCCATCCTCCTTTCTTAGACCCA TCACTCAAACATCCAAgggttttaaattttcgagttttcTAAAATTCAAC TTCACTCAATCCATTCAACAGGTCATTCAATCCATCGATTGGACGTGGTG GCATCATTGGTGCCGTCTGTGAAGCTGAATGGGGAACCAGTAAGCATATT TTAATCTAGAAGCCGGTGAATTATGACTGAGTCCCTCAGGGCAATTGATT TGAAACGCCCCAAAATAAGACCTTCAAAATGGAACACTTGCAGTGCAGAG AAGAATTAGCCAAAATTGAGtaaatttgggtgaaaaatcGACCCATACGC TGTattttcttggaaatttttgtaGCAAAAATGCTAACACTTCGTTTTAC TTCAATATTCTTAAAGTGAACTTTCTCTCATTTCAACCATTATAGTGTAC TTTGCGATGCCTGTAAAACGCAACAATTATAGATTTTCTTAACCTAATTC ATTTAATAGCTCCGGTGACAGAGGTCGAAGCTGGTGATCGATTGAAAGTC GGATGGGTTTCCAACAACCACGGTGGTGGTTACGCAAGAATCTCTTTAGT ACCATGGGGCCAAAGGAAAAGTGCACAAGCCTACAAAGATAACGTGATGA AATTTGCTTGTTATGGACATGACGAAAGACCAGGCAAATTTCAATACGGA GATTGTAAACATCCATGTAATGGAAGACCTGGCTGTGAATACCAAGCTGG TAGGCTCTAGTTACACTTCTAACTGGTATAAGTCCCGGAAGGGATCAGTT AGACAGATTTGGTATTGGAACAGGCCACTGGTCagatcatagtataagaa agccgtgGCTTTCTTATACCATGGTCAAATTAACTCtgttaggctctgaa gatatctggaaGGAtcccaaatttaatttttaagatgtgtatctgacagg gtcgattTTTTAGTTATTTTCGAACAATTTTCAGGGTAAAATTTACCAag cattcatatctgacagggatCACTTTTCAAAATCCAGTGGCACGTCTGCC GTCAAGGACAGTGCCCCCTCTGGGATAACGTTCTTCATAATTTTGGTGAA CCTCGAATTAAAGTCACGGTGTGCCTGTCGGGTTTTCTCTTCTATCCATT TTCAGTCTGAAATTGATACCCCAAACAAACTACTTGTCTTATACAAAAGA TGGAATTCATTAATTCATTGATTTTCAGAAACCATTCAAAAAGCCCCAGA ATATACCTCCGAATGATTTAGATTAGCTATAAAGTTGAAGAAATACATTA AGCAGAAGCAAGAATCTAATTCGAAAATCCCTTAGCTATTGCCTtaacca aagatttattatacactggataaacgactcataaaacgatggagagcgac cattgtattttcattgtttcagaaaacaattgatgttctagctttNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt agctttgtccgcaaaggacaactgccatggcggctcgaagatgtctgatt tttaaaaatgtttatcagtcttatttttaaaaagttctctagctcttttt ctttgtacatttgcagaacaaaaagtttgaaagtaaggctagcattccga gctggatacatttgtgaaatataatgtgagaaaaacatcactagacaaga aattcagacaaagtgcttatagtgacacgaaattttcaattggaaatatc tttccaagactgtccccagaagagctgaaattaacatacataagacttga gtgtcttggctcctctgtggtatgaaaatcctttggaggcacgtggtggc aaagtggtttttttgaggttgaagtttgaaaatttccggtgtcaacattt aagtttcttttacacaacacgtcttttgcatctttctcacagcttgaaac gtcataacggcttataattagcaattaagtgaaagaatctgactctcaca tgAAGGTTTTAAGTCTCTCTTGGGAATTGGATgaatgattttcgataaga aatgcaataaaaatgcttcgaaaaatcatttattgagggaaggagagtga acaataatatcattactgcggacatagctagtacacgagaaatcggcaaa aatctgttacttgtatatccagtgtataataaatccttgccttaactttt tgaagaagaaaaacccAATGAAATTACAAAACAACATAAAGATTTTTCCT ACTATAAACATTGCATTGCATAAGTTTCACTAATCCAATATtagcaagaa aaagaaaaaggattGTGAAATCGATAAGCTAAGcttgattatctttttat caaaacttAATGCCTGAGCTCAACATATTAAGCAAGAAGCCATCTATGAC GTACGGAATCTAtgcacagatctgtaaagcccgaagggctagatttgcgg cttgtatcgaaaagtgaagcctatgtttggaaggatttcctaccaaagtc acgtgactaaaaaatgcaatttcaccggtttgagagatgtgaaatagagt ttgccgcctactttttttgatctcgcgctccgaaaacaattaaaatgcta gatcctatccatcggcacgaaatttaaaaagtcaaatttttgcttcactt ttttttgctggagaaagcttaaagttgcctatctagtccttcgggtttta cagatatctgtgaatCTATGTCGTGAGTTTTTCGCAAGCTAGCGCCCAAA TCTCAAGGCTAACTCTGTCTCGTGAAATTTGACCTGTATGCTGTAGCTTG GGGAGCGGATCTATACCGCGAAATTCTCCAATCTCACGTAATAGAAATTG ATAAGCATGattaatatgaaaaaaaaacaagcatggaatcaaatactaaa atggctaattgaccaaatttgaccaaaattctaTCATCCCCTTTTATTTT GATGAAGTCTTCCTTTGAACAGTTTTATAACATAGCGGAACATCTTCTTG CCCTTAGAGCATTTTGAATTTAGGTCACATGGGTTTGAAAAAAGGGAGAC AATTAATCATATCACTCTGAATGGTCACTTTCTACTAACTGAGACCACGT TACACTCTACGGtaccgtttcgctccgaaaggaaatgaagccattatatt ggttaaattcaagttttacgtcacttctaaccaatagtaTGGCTTCATTT CATTTCGGAGGAAAGCGGAACCGTTACGTGTGAACATCTGATAAACACGT ATTTTAAACCTTACGTAATACACACGTAACATCAATTATATCTTACGCTT TTTCTAACAGACCCAGAAGATGTTGAGCGTTTCGACACCACTATTGGGAT TCCAACCAACCTTGCTGATGGTTATTATTCACTCCAAGTCTCAATGTTGG TTGGTAATGGTGGTGTCTATAACAGCTGTGGTAAAATAAAGGTCACCGGT GGAAACCCTTCTTACAACTGTTGGTCAAGTAACAGACCAGTGACTAATAA ATGTTTAAGATCTGGTGGACCAGCAAGATCAGTTATCGAATCAGGTTGGT TTAATTATTTTCCACATGCTTATTATCATGAGAGCAACACTTTAGAAAAA CATAAGAAAgcctacccagctggcacacaacgttgtttcaacgtttatct aacgttcacaaggtctatatataacgttagatgaacgttaaaacaacgtt gtgtgccagctgggtaagcGGTGTGAAAAAGGCCCAGCAATGTTTTGTCA GTTTTGTCATATTTTCGAAGCAGAGTTTCCATTTTAACTTCGTTTTCAAC TTGAGTACCCAAGAATTGACATTTCGCTGCGCGCCTTTTTCTCCTTAATA TTACATGAAATCCAAAACatctattttttttgttttatttcttatGGTTG TAATATAAAAATAGCTTCTCACATAAATATTTTCTACTTTTAGGAACGAA ACGTGGCGATTTTTGTTACGGTCTTGATGGCTCCATTGGAACCGTCGATG ATAACATTTCAGACGTCCCCATCAATGTGGAATGTGACCCCCGTGTTGCG TGCAGCCAATCAACAAACACTGCTCTATGTTACCGTGATTTCCCTTCAAT GGCTAAAATCATGGTGagatattttttcgatttttcgattttttgataaA GGATAAAGGAAATTCTAATTTGGTTTTTATATATTATGACCCTAATACCC ATGTGTCACAAACCCGATAGAACCCCGCagcttaactggaaaattggGCC AAAATTTCATCCACGTTTGGAAAAAGTACCCtataatttcagccccactg ggaaattgactttgattttatcctcatTTGAAGTTCTATGTGCAAAATAT TGCACATCCAAAACCATCGCCATTGGATATTTTAAagcttcccagctggc acacaacgttgttttaacgttaatctaacgttatatggacgttgtgaacg ttagataaacgttgacacaacgttgcgtgccagctgggtttgGAACAATA TTGTTTCTATCCCAATTGTGTGATCTCGATATGATTATTATTCTATAGGT GTaggaaaaggttccaccgggatTCTGAGACTGGGGTGTCCTAATGTTTG AAATTATCTTTATTTTATAGACTGCCTCAAGAAATCCCCGTCAACCAAAT TGTAGATCCTACAACACATTACCCGTCATctccaaataaaaatgaaaata acgaTGGTGGAcgtaatatttatttatttaaatttaaaattttgaaactg ttgTAGTTAAGTATCTTCTTTACCATAAACTATGGAAGGATAATCTGTAA TCTGTTTGCAACCTAAAAActtatttatttcttgacatTAAAATTTTC

Coding sequence (CDS) from alignment at scaffold_21:95725..101772+

>TCONS_00052069 ID=TCONS_00052069|Name=TCONS_00052069|organism=Clytia hemisphaerica|type=CDS|length=4860bp|location=Sequence derived from alignment at scaffold_21:95725..101772+ (Clytia hemisphaerica)
ATGGCTCACTCCTGGATGTCGTGTCCACCGTCATTCAATCCATCGATTGG
ACGTGGTGGCATCATTGGTGCCGTCTGTGAAGCTGAATGGGGAACCACTC
CGGTGACAGAGGTCGAAGCTGGTGATCGATTGAAAGTCGGATGGGTTTCC
AACAACCACGGTGGTGGTTACGCAAGAATCTCTTTAGTACCATGGGGCCA
AAGGAAAAGTGCACAAGCCTACAAAGATAACGTGATGAAATTTGCTTGTT
ATGGACATGACGAAAGACCAGGCAAATTTCAATACGGAGATTGTAAACAT
CCATGTAATGGAAGACCTGGCTGTGAATACCAAGCTGACCCAGAAGATGT
TGAGCGTTTCGACACCACTATTGGGATTCCAACCAACCTTGCTGATGGTT
ATTATTCACTCCAAGTCTCAATGTTGGTTGGTAATGGTGGTGTCTATAAC
AGCTGTGGTAAAATAAAGGTCACCGGTGGAAACCCTTCTTACAACTGTTG
GTCAAGTAACAGACCAGTGACTAATAAATGTTTAAGATCTGGTGGACCAG
CAAGATCAGTTATCGAATCAGGAACGAAACGTGGCGATTTTTGTTACGGT
CTTGATGGCTCCATTGGAACCGTCGATGATAACATTTCAGACGTCCCCAT
CAATGTGGAATGTGACCCCCGTGTTGCGTGCAGCCAATCAACAAACACTG
CTCTATGTTACCGTGATTTCCCTTCAATGGCTAAAATCATGACTGCCTCA
AGAAATCCCCGTCAACCAAATTGTAGATCCTACAACACATTACCCGTCAT
ctccaaataaATGGCTCACTCCTGGATGTCGTGTCCACCGTCATTCAATC
CATCGATTGGACGTGGTGGCATCATTGGTGCCGTCTGTGAAGCTGAATGG
GGAACCACTCCGGTGACAGAGGTCGAAGCTGGTGATCGATTGAAAGTCGG
ATGGGTTTCCAACAACCACGGTGGTGGTTACGCAAGAATCTCTTTAGTAC
CATGGGGCCAAAGGAAAAGTGCACAAGCCTACAAAGATAACGTGATGAAA
TTTGCTTGTTATGGACATGACGAAAGACCAGGCAAATTTCAATACGGAGA
TTGTAAACATCCATGTAATGGAAGACCTGGCTGTGAATACCAAGCTGACC
CAGAAGATGTTGAGCGTTTCGACACCACTATTGGGATTCCAACCAACCTT
GCTGATGGTTATTATTCACTCCAAGTCTCAATGTTGGTTGGTAATGGTGG
TGTCTATAACAGCTGTGGTAAAATAAAGGTCACCGGTGGAAACCCTTCTT
ACAACTGTTGGTCAAGTAACAGACCAGTGACTAATAAATGTTTAAGATCT
GGTGGACCAGCAAGATCAGTTATCGAATCAGGAACGAAACGTGGCGATTT
TTGTTACGGTCTTGATGGCTCCATTGGAACCGTCGATGATAACATTTCAG
ACGTCCCCATCAATGTGGAATGTGACCCCCGTGTTGCGTGCAGCCAATCA
ACAAACACTGCTCTATGTTACCGTGATTTCCCTTCAATGGCTAAAATCAT
GACTGCCTCAAGAAATCCCCGTCAACCAAATTGTAGATCCTACAACACAT
TACCCGTCATctccaaataaATGGCTCACTCCTGGATGTCGTGTCCACCG
TCATTCAATCCATCGATTGGACGTGGTGGCATCATTGGTGCCGTCTGTGA
AGCTGAATGGGGAACCACTCCGGTGACAGAGGTCGAAGCTGGTGATCGAT
TGAAAGTCGGATGGGTTTCCAACAACCACGGTGGTGGTTACGCAAGAATC
TCTTTAGTACCATGGGGCCAAAGGAAAAGTGCACAAGCCTACAAAGATAA
CGTGATGAAATTTGCTTGTTATGGACATGACGAAAGACCAGGCAAATTTC
AATACGGAGATTGTAAACATCCATGTAATGGAAGACCTGGCTGTGAATAC
CAAGCTGACCCAGAAGATGTTGAGCGTTTCGACACCACTATTGGGATTCC
AACCAACCTTGCTGATGGTTATTATTCACTCCAAGTCTCAATGTTGGTTG
GTAATGGTGGTGTCTATAACAGCTGTGGTAAAATAAAGGTCACCGGTGGA
AACCCTTCTTACAACTGTTGGTCAAGTAACAGACCAGTGACTAATAAATG
TTTAAGATCTGGTGGACCAGCAAGATCAGTTATCGAATCAGGAACGAAAC
GTGGCGATTTTTGTTACGGTCTTGATGGCTCCATTGGAACCGTCGATGAT
AACATTTCAGACGTCCCCATCAATGTGGAATGTGACCCCCGTGTTGCGTG
CAGCCAATCAACAAACACTGCTCTATGTTACCGTGATTTCCCTTCAATGG
CTAAAATCATGACTGCCTCAAGAAATCCCCGTCAACCAAATTGTAGATCC
TACAACACATTACCCGTCATctccaaataaATGGCTCACTCCTGGATGTC
GTGTCCACCGTCATTCAATCCATCGATTGGACGTGGTGGCATCATTGGTG
CCGTCTGTGAAGCTGAATGGGGAACCACTCCGGTGACAGAGGTCGAAGCT
GGTGATCGATTGAAAGTCGGATGGGTTTCCAACAACCACGGTGGTGGTTA
CGCAAGAATCTCTTTAGTACCATGGGGCCAAAGGAAAAGTGCACAAGCCT
ACAAAGATAACGTGATGAAATTTGCTTGTTATGGACATGACGAAAGACCA
GGCAAATTTCAATACGGAGATTGTAAACATCCATGTAATGGAAGACCTGG
CTGTGAATACCAAGCTGACCCAGAAGATGTTGAGCGTTTCGACACCACTA
TTGGGATTCCAACCAACCTTGCTGATGGTTATTATTCACTCCAAGTCTCA
ATGTTGGTTGGTAATGGTGGTGTCTATAACAGCTGTGGTAAAATAAAGGT
CACCGGTGGAAACCCTTCTTACAACTGTTGGTCAAGTAACAGACCAGTGA
CTAATAAATGTTTAAGATCTGGTGGACCAGCAAGATCAGTTATCGAATCA
GGAACGAAACGTGGCGATTTTTGTTACGGTCTTGATGGCTCCATTGGAAC
CGTCGATGATAACATTTCAGACGTCCCCATCAATGTGGAATGTGACCCCC
GTGTTGCGTGCAGCCAATCAACAAACACTGCTCTATGTTACCGTGATTTC
CCTTCAATGGCTAAAATCATGACTGCCTCAAGAAATCCCCGTCAACCAAA
TTGTAGATCCTACAACACATTACCCGTCATctccaaataaATGGCTCACT
CCTGGATGTCGTGTCCACCGTCATTCAATCCATCGATTGGACGTGGTGGC
ATCATTGGTGCCGTCTGTGAAGCTGAATGGGGAACCACTCCGGTGACAGA
GGTCGAAGCTGGTGATCGATTGAAAGTCGGATGGGTTTCCAACAACCACG
GTGGTGGTTACGCAAGAATCTCTTTAGTACCATGGGGCCAAAGGAAAAGT
GCACAAGCCTACAAAGATAACGTGATGAAATTTGCTTGTTATGGACATGA
CGAAAGACCAGGCAAATTTCAATACGGAGATTGTAAACATCCATGTAATG
GAAGACCTGGCTGTGAATACCAAGCTGACCCAGAAGATGTTGAGCGTTTC
GACACCACTATTGGGATTCCAACCAACCTTGCTGATGGTTATTATTCACT
CCAAGTCTCAATGTTGGTTGGTAATGGTGGTGTCTATAACAGCTGTGGTA
AAATAAAGGTCACCGGTGGAAACCCTTCTTACAACTGTTGGTCAAGTAAC
AGACCAGTGACTAATAAATGTTTAAGATCTGGTGGACCAGCAAGATCAGT
TATCGAATCAGGAACGAAACGTGGCGATTTTTGTTACGGTCTTGATGGCT
CCATTGGAACCGTCGATGATAACATTTCAGACGTCCCCATCAATGTGGAA
TGTGACCCCCGTGTTGCGTGCAGCCAATCAACAAACACTGCTCTATGTTA
CCGTGATTTCCCTTCAATGGCTAAAATCATGACTGCCTCAAGAAATCCCC
GTCAACCAAATTGTAGATCCTACAACACATTACCCGTCATctccaaataa
ATGGCTCACTCCTGGATGTCGTGTCCACCGTCATTCAATCCATCGATTGG
ACGTGGTGGCATCATTGGTGCCGTCTGTGAAGCTGAATGGGGAACCACTC
CGGTGACAGAGGTCGAAGCTGGTGATCGATTGAAAGTCGGATGGGTTTCC
AACAACCACGGTGGTGGTTACGCAAGAATCTCTTTAGTACCATGGGGCCA
AAGGAAAAGTGCACAAGCCTACAAAGATAACGTGATGAAATTTGCTTGTT
ATGGACATGACGAAAGACCAGGCAAATTTCAATACGGAGATTGTAAACAT
CCATGTAATGGAAGACCTGGCTGTGAATACCAAGCTGACCCAGAAGATGT
TGAGCGTTTCGACACCACTATTGGGATTCCAACCAACCTTGCTGATGGTT
ATTATTCACTCCAAGTCTCAATGTTGGTTGGTAATGGTGGTGTCTATAAC
AGCTGTGGTAAAATAAAGGTCACCGGTGGAAACCCTTCTTACAACTGTTG
GTCAAGTAACAGACCAGTGACTAATAAATGTTTAAGATCTGGTGGACCAG
CAAGATCAGTTATCGAATCAGGAACGAAACGTGGCGATTTTTGTTACGGT
CTTGATGGCTCCATTGGAACCGTCGATGATAACATTTCAGACGTCCCCAT
CAATGTGGAATGTGACCCCCGTGTTGCGTGCAGCCAATCAACAAACACTG
CTCTATGTTACCGTGATTTCCCTTCAATGGCTAAAATCATGACTGCCTCA
AGAAATCCCCGTCAACCAAATTGTAGATCCTACAACACATTACCCGTCAT
ctccaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032977XLOC_032977Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052069-proteinTCONS_00052069-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052069-exon-scaffold_21-1491911889:95725..95761TCONS_00052069-exon-scaffold_21-1491911889:95725..95761Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1510915933:95725..95761TCONS_00052069-exon-scaffold_21-1510915933:95725..95761Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1575043694:95725..95761TCONS_00052069-exon-scaffold_21-1575043694:95725..95761Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1491911889:96086..96131TCONS_00052069-exon-scaffold_21-1491911889:96086..96131Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1510915933:96086..96131TCONS_00052069-exon-scaffold_21-1510915933:96086..96131Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1575043694:96086..96131TCONS_00052069-exon-scaffold_21-1575043694:96086..96131Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1491911889:97046..97113TCONS_00052069-exon-scaffold_21-1491911889:97046..97113Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1510915933:97046..97113TCONS_00052069-exon-scaffold_21-1510915933:97046..97113Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1575043694:97046..97113TCONS_00052069-exon-scaffold_21-1575043694:97046..97113Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1491911889:97434..97673TCONS_00052069-exon-scaffold_21-1491911889:97434..97673Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1510915933:97434..97673TCONS_00052069-exon-scaffold_21-1510915933:97434..97673Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1575043694:97434..97673TCONS_00052069-exon-scaffold_21-1575043694:97434..97673Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1491911889:100235..100468TCONS_00052069-exon-scaffold_21-1491911889:100235..100468Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1510915933:100235..100468TCONS_00052069-exon-scaffold_21-1510915933:100235..100468Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1575043694:100235..100468TCONS_00052069-exon-scaffold_21-1575043694:100235..100468Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1491911889:100868..101037TCONS_00052069-exon-scaffold_21-1491911889:100868..101037Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1510915933:100868..101037TCONS_00052069-exon-scaffold_21-1510915933:100868..101037Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1575043694:100868..101037TCONS_00052069-exon-scaffold_21-1575043694:100868..101037Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1491911889:101545..101772TCONS_00052069-exon-scaffold_21-1491911889:101545..101772Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1510915933:101545..101772TCONS_00052069-exon-scaffold_21-1510915933:101545..101772Clytia hemisphaericaexon
TCONS_00052069-exon-scaffold_21-1575043694:101545..101772TCONS_00052069-exon-scaffold_21-1575043694:101545..101772Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:95725..101772 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.352656 0.464456 0.672416 0.839344 4.92152 5.13336 1.14808 2.69269 80.6831 29.0493 28.7934 309.776 3.95896 1.06372 2.50189 1.62554 0.0421399 0 0 0.136298 0.0467947 0 0.0597629 0.0637806 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052069 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top