XLOC_032977 (gene) - C. hemisphaerica

Overview
NameXLOC_032977
Unique NameXLOC_032977
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_21:95725..101772+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032977 ID=XLOC_032977|Name=XLOC_032977|organism=Clytia hemisphaerica|type=gene|length=6048bp|location=Sequence derived from alignment at scaffold_21:95725..101772+ (Clytia hemisphaerica)
GTTTAATTTCTacactaaaatagattttttattttaagtacGCTCTTCTT CTGAGTGTCTTTCATACAAGGAATTCGTCACGATCTCGCATCTATTTGTC ACCGAGTCTCTTCCTTCCTGAATTAGGGTTAGCAATTGCATTGAAAAGTA TAAAAGGATCATGAAATTGATCAAATCTTCAGAATCGCAGTTTACAAATT CTTGTAAACTTGGATCTAAAAGCGTGTTTTCAAAGGGCTTTTTGGTATTT ATTGTACATTATACTTTGGTGTTGAAATTTGTCTTGTTAAGAAAGTgcaa aacttttcgaaaaaagatttaattttgacaaatatGGTAGCTTTAGCTGT GTTATTTATAGTTTTGTTGCCGAGCATTATGGCTCACTCCTGGATGTCGT GTCCACCGTAAGTATTTTTTGCACACCACCTGTCTAAACCAGTTTCGCAT TTGAGCTTGATTCCTTTGGCTGCCATTATTTCAATTCGCAACCTGATTCC GATATTTTGACTCACTGGAATGATAGATCAGGCAGGGGGTGTTTATACCT GTGGATAgatctatgaaaaaaaatttcaactatAACTGGACTTGCTTTGC TTTATGCCATATCATATACTTGCATTTGAAGTTTATACTTCTCATTCTTA AACAATCTTTTAAAGGTTTTCACGGGGTCTACACTCAGCTGAAGCAGCTA TCTATGAACTTAGTGGGACATAGGAAGCAATGGGGCTCGGTACCGGGAAC CCATGGTTTTAACTGGCACTTAGAACACTTGATCGAAGCTGCTCTTTATT ATTCGCAAATTAATAAATCTTCAAATTAACTTATtcataatgggcttttc caaaggaatcgtgcaccccctgttgaagaggtccatttccgttccaaggg ggtaaggtttgaattGCAGTAGAATTCCATAAGGTTAGaagaaaatccgt caaaaataagcggaattccaaggggataatgattgaaaatttgtaaaaat tcgaaattccagaggggtatgatcctataattgcctggaattccaagggg gtaggtcacaaaaggttggacctcctcaacagggggtgcacggttttttt ctggaaaagcccaatcaaaGAATGAACTCCCGTAATACAGGACCGGATCT AAGAGGAtccaaaatttacaaaagagAGTCTCCATTTCCTTATAAGGATT TATTTTACACTTTGTCATGAATTTTGAGCCATCCTCCTTTCTTAGACCCA TCACTCAAACATCCAAgggttttaaattttcgagttttcTAAAATTCAAC TTCACTCAATCCATTCAACAGGTCATTCAATCCATCGATTGGACGTGGTG GCATCATTGGTGCCGTCTGTGAAGCTGAATGGGGAACCAGTAAGCATATT TTAATCTAGAAGCCGGTGAATTATGACTGAGTCCCTCAGGGCAATTGATT TGAAACGCCCCAAAATAAGACCTTCAAAATGGAACACTTGCAGTGCAGAG AAGAATTAGCCAAAATTGAGtaaatttgggtgaaaaatcGACCCATACGC TGTattttcttggaaatttttgtaGCAAAAATGCTAACACTTCGTTTTAC TTCAATATTCTTAAAGTGAACTTTCTCTCATTTCAACCATTATAGTGTAC TTTGCGATGCCTGTAAAACGCAACAATTATAGATTTTCTTAACCTAATTC ATTTAATAGCTCCGGTGACAGAGGTCGAAGCTGGTGATCGATTGAAAGTC GGATGGGTTTCCAACAACCACGGTGGTGGTTACGCAAGAATCTCTTTAGT ACCATGGGGCCAAAGGAAAAGTGCACAAGCCTACAAAGATAACGTGATGA AATTTGCTTGTTATGGACATGACGAAAGACCAGGCAAATTTCAATACGGA GATTGTAAACATCCATGTAATGGAAGACCTGGCTGTGAATACCAAGCTGG TAGGCTCTAGTTACACTTCTAACTGGTATAAGTCCCGGAAGGGATCAGTT AGACAGATTTGGTATTGGAACAGGCCACTGGTCagatcatagtataagaa agccgtgGCTTTCTTATACCATGGTCAAATTAACTCtgttaggctctgaa gatatctggaaGGAtcccaaatttaatttttaagatgtgtatctgacagg gtcgattTTTTAGTTATTTTCGAACAATTTTCAGGGTAAAATTTACCAag cattcatatctgacagggatCACTTTTCAAAATCCAGTGGCACGTCTGCC GTCAAGGACAGTGCCCCCTCTGGGATAACGTTCTTCATAATTTTGGTGAA CCTCGAATTAAAGTCACGGTGTGCCTGTCGGGTTTTCTCTTCTATCCATT TTCAGTCTGAAATTGATACCCCAAACAAACTACTTGTCTTATACAAAAGA TGGAATTCATTAATTCATTGATTTTCAGAAACCATTCAAAAAGCCCCAGA ATATACCTCCGAATGATTTAGATTAGCTATAAAGTTGAAGAAATACATTA AGCAGAAGCAAGAATCTAATTCGAAAATCCCTTAGCTATTGCCTtaacca aagatttattatacactggataaacgactcataaaacgatggagagcgac cattgtattttcattgtttcagaaaacaattgatgttctagctttNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt agctttgtccgcaaaggacaactgccatggcggctcgaagatgtctgatt tttaaaaatgtttatcagtcttatttttaaaaagttctctagctcttttt ctttgtacatttgcagaacaaaaagtttgaaagtaaggctagcattccga gctggatacatttgtgaaatataatgtgagaaaaacatcactagacaaga aattcagacaaagtgcttatagtgacacgaaattttcaattggaaatatc tttccaagactgtccccagaagagctgaaattaacatacataagacttga gtgtcttggctcctctgtggtatgaaaatcctttggaggcacgtggtggc aaagtggtttttttgaggttgaagtttgaaaatttccggtgtcaacattt aagtttcttttacacaacacgtcttttgcatctttctcacagcttgaaac gtcataacggcttataattagcaattaagtgaaagaatctgactctcaca tgAAGGTTTTAAGTCTCTCTTGGGAATTGGATgaatgattttcgataaga aatgcaataaaaatgcttcgaaaaatcatttattgagggaaggagagtga acaataatatcattactgcggacatagctagtacacgagaaatcggcaaa aatctgttacttgtatatccagtgtataataaatccttgccttaactttt tgaagaagaaaaacccAATGAAATTACAAAACAACATAAAGATTTTTCCT ACTATAAACATTGCATTGCATAAGTTTCACTAATCCAATATtagcaagaa aaagaaaaaggattGTGAAATCGATAAGCTAAGcttgattatctttttat caaaacttAATGCCTGAGCTCAACATATTAAGCAAGAAGCCATCTATGAC GTACGGAATCTAtgcacagatctgtaaagcccgaagggctagatttgcgg cttgtatcgaaaagtgaagcctatgtttggaaggatttcctaccaaagtc acgtgactaaaaaatgcaatttcaccggtttgagagatgtgaaatagagt ttgccgcctactttttttgatctcgcgctccgaaaacaattaaaatgcta gatcctatccatcggcacgaaatttaaaaagtcaaatttttgcttcactt ttttttgctggagaaagcttaaagttgcctatctagtccttcgggtttta cagatatctgtgaatCTATGTCGTGAGTTTTTCGCAAGCTAGCGCCCAAA TCTCAAGGCTAACTCTGTCTCGTGAAATTTGACCTGTATGCTGTAGCTTG GGGAGCGGATCTATACCGCGAAATTCTCCAATCTCACGTAATAGAAATTG ATAAGCATGattaatatgaaaaaaaaacaagcatggaatcaaatactaaa atggctaattgaccaaatttgaccaaaattctaTCATCCCCTTTTATTTT GATGAAGTCTTCCTTTGAACAGTTTTATAACATAGCGGAACATCTTCTTG CCCTTAGAGCATTTTGAATTTAGGTCACATGGGTTTGAAAAAAGGGAGAC AATTAATCATATCACTCTGAATGGTCACTTTCTACTAACTGAGACCACGT TACACTCTACGGtaccgtttcgctccgaaaggaaatgaagccattatatt ggttaaattcaagttttacgtcacttctaaccaatagtaTGGCTTCATTT CATTTCGGAGGAAAGCGGAACCGTTACGTGTGAACATCTGATAAACACGT ATTTTAAACCTTACGTAATACACACGTAACATCAATTATATCTTACGCTT TTTCTAACAGACCCAGAAGATGTTGAGCGTTTCGACACCACTATTGGGAT TCCAACCAACCTTGCTGATGGTTATTATTCACTCCAAGTCTCAATGTTGG TTGGTAATGGTGGTGTCTATAACAGCTGTGGTAAAATAAAGGTCACCGGT GGAAACCCTTCTTACAACTGTTGGTCAAGTAACAGACCAGTGACTAATAA ATGTTTAAGATCTGGTGGACCAGCAAGATCAGTTATCGAATCAGGTTGGT TTAATTATTTTCCACATGCTTATTATCATGAGAGCAACACTTTAGAAAAA CATAAGAAAgcctacccagctggcacacaacgttgtttcaacgtttatct aacgttcacaaggtctatatataacgttagatgaacgttaaaacaacgtt gtgtgccagctgggtaagcGGTGTGAAAAAGGCCCAGCAATGTTTTGTCA GTTTTGTCATATTTTCGAAGCAGAGTTTCCATTTTAACTTCGTTTTCAAC TTGAGTACCCAAGAATTGACATTTCGCTGCGCGCCTTTTTCTCCTTAATA TTACATGAAATCCAAAACatctattttttttgttttatttcttatGGTTG TAATATAAAAATAGCTTCTCACATAAATATTTTCTACTTTTAGGAACGAA ACGTGGCGATTTTTGTTACGGTCTTGATGGCTCCATTGGAACCGTCGATG ATAACATTTCAGACGTCCCCATCAATGTGGAATGTGACCCCCGTGTTGCG TGCAGCCAATCAACAAACACTGCTCTATGTTACCGTGATTTCCCTTCAAT GGCTAAAATCATGGTGagatattttttcgatttttcgattttttgataaA GGATAAAGGAAATTCTAATTTGGTTTTTATATATTATGACCCTAATACCC ATGTGTCACAAACCCGATAGAACCCCGCagcttaactggaaaattggGCC AAAATTTCATCCACGTTTGGAAAAAGTACCCtataatttcagccccactg ggaaattgactttgattttatcctcatTTGAAGTTCTATGTGCAAAATAT TGCACATCCAAAACCATCGCCATTGGATATTTTAAagcttcccagctggc acacaacgttgttttaacgttaatctaacgttatatggacgttgtgaacg ttagataaacgttgacacaacgttgcgtgccagctgggtttgGAACAATA TTGTTTCTATCCCAATTGTGTGATCTCGATATGATTATTATTCTATAGGT GTaggaaaaggttccaccgggatTCTGAGACTGGGGTGTCCTAATGTTTG AAATTATCTTTATTTTATAGACTGCCTCAAGAAATCCCCGTCAACCAAAT TGTAGATCCTACAACACATTACCCGTCATctccaaataaaaatgaaaata acgaTGGTGGAcgtaatatttatttatttaaatttaaaattttgaaactg ttgTAGTTAAGTATCTTCTTTACCATAAACTATGGAAGGATAATCTGTAA TCTGTTTGCAACCTAAAAActtatttatttcttgacatTAAAATTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052069TCONS_00052069Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052069-proteinTCONS_00052069-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:95725..101772 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.35 0.46 0.67 0.84 4.92 5.13 1.15 2.69 80.68 29.05 28.79 309.78 3.96 1.06 2.5 1.63 0.04 0 0 0.14 0.05 0 0.06 0.06 0 0