TCONS_00052048 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052048
Unique NameTCONS_00052048
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2661

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052048 ID=TCONS_00052048|Name=TCONS_00052048|organism=Clytia hemisphaerica|type=transcript|length=2661bp
agaaaatgtatgaatttccaaggcaattgaattaaaaaggcaaaaaagag
tggaatttccgatgcgtTTTGCAAAAGTAGATagatttttatcggaattt
ccgaccaccactggaagagaaaaattatttctgaggctagaaaaaattta
aaaatgcacgtcgtccgacggggggtaacaaagaaattttctttacttca
ttttaaaaataccttatcttggccctttttacgccggaccttattagcgt
tatttttgggctcgttggtGAAATAAGGGCCGGTAATGTAGTCAATAGTC
TGTCACATCGATATATAATTGATAACAATACGTGATCtagataagtaaat
aattgataagtaatcaatgcatgaacgataagtaatcgatgattgttaac
aatcgataaatgattgataagtaatcgataggttgtatgtagtcgatatg
tgTTCAATAAGTAATCAatagcttggaaataatcgatcgctgatcgatac
tcaagattttttgaaggtctgattacctatcgattctatcggttaatcga
tatctaacccatcgattacttatcgattatttatcgattactcaagatcg
CCCAAACTCCATCAACAGTACCAATTTCTTCAGTAGGGGATGGAACTAAT
ATCCTGGTAACATTGATCTCTTTAATCAACAGCTGGCTTCGTCCATTCAA
ATAACCAAATAACGAACAAACGACAACCTCTTCACCCGCTACCGCCTCAA
ACGCCCTCACAGGAGCGATCAACAACAATAATTGAAGCCTCGCTACGAGT
GACAACGTCCATCAACTCTCATTGCCACGGTTAACCCATTCTGATTGCCA
CCCCTCCTTTAATTTTCGGTTAAAATATGAACTTTGAAGACAAAAAAGTG
TTTGTTGGAAATCTACCTTTCTATACCAAAGAAGATGAGGTTCAAGACAT
TTTGAGACAATTTACTACAAATCTTTCCATCACTGAAATGTTTATATGGA
AGAATAGAAATACACCAACTAATGTTCCAACAGAGGCTGCTTTTGTAACA
TTACAAACTAATGAAATACGGGATGAATTGGTGAACAATTATCGCTCAAG
ATATCCAGACCGCTCAACAAGATTTCCTTTCCGAAATAAGCACGGCAATG
AGACAAATATTTACATTACACTGTGTTATATCCAGCcagataaaaaatat
aaaggacCAAAATCTTTCcagaaaaccaaagaaacctCCAAAGCTGCTCC
TATCTCGACACCGTTAATACAAACAAAGGATGTCTGTAAACAAGATGAGT
TTATCCAAGTTAACAGCCAACAAGAAAACAATCTCTCAAATGGAAATGAA
CAACTTAAAAAGACTGATATAGCGAATGAAGAGAAAGCTCCATTTTCAGC
ACTGGACAAATTGAAATCCGAAATTGAAAAAGAGAGATGCCAGCTGTTAG
AAAAGATTGACTTTTTTGAAGGCAATTTGAAAATCAAGTGTACTGGATTT
TTCATGTCCCTTAAGGAACTTTCTTTGCTTCAAAAGGAATTTGAGGAACT
TTCTGTATCTTTGGTCGAAAAACGAAAAGATTTAAAGAAGAAAGCGAGTG
AATTTACAGAGATTTATGACCTCTATGAGCAATTAAATAGCTCAATAATT
TGACATTGCTGCAACTCATGCTTGGCTGTTTTAGTATGATCTTAGTatga
tcttttttattttttatacggCGTGTCTAGAAAAAAGAGGTAAAAGTAAA
TTTACTAACCCAGGAATGGCATATCTATAtgaatatcaaagaaattccct
tttccaatttttcctAACTCTAGTGgaataaaaaattttggggggttTTA
CAATATAAATTTGTTCCGCTTATTCCCGAAACACTTTAGTTTCACTTATA
TGtaatgagaattttttgtttgagaataagaattctttttgTTTGTTATA
TCTTTGTTATGCTTTGTTATTTTATTTACAATTGTTGCACTAGATTTGAC
ATTTTGAGCTAAAATAATTTCATCCAAATGAAATATTCATTATTGTTATT
AATTATTCAGATGATAAATAATGtcaaataatcaaataatgaataatTCA
GTTTGATACCTGGCCTGTGGCTACATGCAACACTTTTTTTGAGGTGAGAA
TTCTAGAATACTGTATGCTTCGAGCTCTAGTGTAAGATGTTGAAATCTta
ctttaaatattttgtagaGTGTAGGCTTTTATTTTCATAGTAGATAGCAA
ACAGTGTGTTTATCATTACTACAATAACacaatttatttatattgaTCAT
TTATTTAGATTTAGTTAGATTTATTACATATTTTAGGATAATATATTATG
GCTGCTAACGACATTGTGTATATTATTATTAGTAAAATATTTATATCAAA
GTATAACATCATATATTTAGATTCACCGCATTACACGAGTATAGGCCGAG
TTATTGACAGTAAGTTATATCTCTGTAAAAGTAGGgtgcatttttagatt
tctttaTTTAAAGAACTTCTTTCTATTTACGTTCAAATACAACTACAAAA
TGTTTACATGTGATCTTAGTTATTTTCTTGATGTTTTTTCTATAGGTTCA
CTGTTCTAGATTTTTAGGCAtgaccttttttttaaatttaagggGTTTCA
AACAGTGTAAC
Run BLAST on NCBI

transcript from alignment at scaffold_209:44838..54820+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052048 ID=TCONS_00052048|Name=TCONS_00052048|organism=Clytia hemisphaerica|type=transcript|length=9983bp|location=Sequence derived from alignment at scaffold_209:44838..54820+ (Clytia hemisphaerica)
agaaaatgtatgaatttccaaggcaattgaattaaaaaggcaaaaaagag tggaatttccgatgcgtTTTGCAAAAGTAGATagatttttatcggaattt ccgaccaccactggaagagaaaaattatttctgaggctagaaaaaattta aaaatgcacgtcgtccgacggggggtaacaaagaaattttctttacttca ttttaaaaataccttatcttggccctttttacgccggaccttattagcgt tatttttgggctcgttggtGAAATAAGGGCCGGTAATGTAGTCAATAGTC TGTCACATCGATATATAATTGATAACAATACGTGATCtagataagtaaat aattgataagtaatcaatgcatgaacgataagtaatcgatgattgttaac aatcgataaatgattgataagtaatcgataggttgtatgtagtcgatatg tgTTCAATAAGTAATCAatagcttggaaataatcgatcgctgatcgatac tcaagattttttgaaggtctgattacctatcgattctatcggttaatcga tatctaacccatcgattacttatcgattatttatcgattactcaagatcg CCCAAACTCCATCAACAGTACCAATTTCTTCAGTAGGGGATGGAACTAAT ATCCTGGTAACATTGATCTCTTTAATCAACAGCTGGCTTCGTCCATTCAA ATAACCAAATAACGAACAAACGACAACCTCTTCACCCGCTACCGCCTCAA ACGCCCTCACAGGAGCGATCAACAACAATAATTGAAGCCTCGCTACGAGT GACAACGTCCATCAACTCTCATTGCCACGGTTAACCCATTCTGATTGCCA CCCCTCCTTTAATTTTCGGTATGAATCTTTGTATTGTTTTCTTAAAGTCT TTAAGGCTGGTAAAGTTATTGAGACAAGCTTATCAGTATTCACTTGAATA TGTGTAATTTTAAATTCAACCTTCCACTTGAATGTTTGCTTTCTGGCTTT TGTTGTTCCTTTTTTCTCGAATCAGGATAAATTCTGGCACTAGAATTTTG TTGTGATTGTCGTTGTGCTGCTTCATTAGTCTTTTAAAAGAGATGGGGAT AAAGGGCTTCGATAAAAAGGATCCTAGCTCTtaacttatttttattattt ctgTATCTCTGTCTTGTTATGGTTAGGTCAAGTTAAATTTAGTTTGTGGT TAATCACTTTTGTTTAGAGATCAATGcgttttgtttctttttgtttcaaa gagtTCTTAATGTAGTAGGAATAGATCAAATTTGCCATTTGAaatttgtt gaatattttgcaTCTGCTTTCTCAAGTTGAAATGGCAAATTGTTGTTGCT ACTTGAAGAAAAGGGTAGTGATCCGGTTTTtgcttttcttcttttgcttt AAACAGTTTCTAATTAAAAGCTTATTATAGTGGATTTTTGACTGGATTGa tgtgttttgattttgagataTTGTCATAAaccttttgcaatttttcaaaa tcacccTTTACCAAGTATGGCGAGATTTCAACAAATTCAAATTCTGTGTT GTCCTGCAGGTTGACTTGAAAATTATGTTGttgtcaaaaactttttgcaa tattttttaaatcaccCTTTACCAAGCATGGCAAGAtttcaacaaattca aactCTGTGCAGCTCTGTGTTGTCCTGCAggttgacttgaaatttttatg gCCCTCAGAACACCTTCAAACAAGTTTGTCAAGATTAAGATTTGACTACG GGGTAAATATGGGACACACTTTTTAGAGATAAGGTGCCTTGTTTGATAAT GAGACTATTATAATCTCAAACCATAGTATCTTGATGTCAGAATTCAGTCA AATATAATCAAAGTGATTGCAGCTCTTCCTGACACTTGAAAACTTCTTTC TAAAACTACGAAAATTGATTTGTATAGTCACATGTGaaacttttgttgaa acatcaaaagtatatgTTAGAATAATCTGACTAGACATTTTTCTAGCAGC TAGAATGACTATCTCCAAAATCCTCTCAATCTGAATCCAAATTTATAATA ATAACAAGGTTTTTAGGGGTGTCCCGTATTTCCCCTTTATTTTAACActa attaccccagatgactatacaataaacgtcaagctgttaagACCGGGAAC TGTCGGACCGtgaactgtcgaaatggcaatcgcgtgccaggacaaagttt ttgcaagcgagggaatatatgaggatttaatatcatcgaactaatcgaac tttttactgaccgaactaatcgaactgctattgcttcaaaaattgtgagt gttcgattaggttcgactaatttttttaatcgaactttaatcgtttgatg gagttcgattagttcgattggttcgacaagttcgattgatcaggtctggt ttagaagattctttagcctttttagaaaatttttgtccaCGGGTTAAAAA TTTGATCtgtgcatttttttataatcaagtGTAACATTTTTCCACTCTGT GTAAATGCAACAAGTCGCAGTGATCGAGTGTATTTGCACAGGGTTTTTTC GTCATTTCGTATTCGACTCATTGCATTTGCCGCATGTTGAACcctgtgca aatgcaaggatttccgtGACTGGTAGTGACCAATAGTTTGTACCCTAGGA AAAATATATATCTAGCTGAAACTCCNGGATTTCCGTGACTGGTAGTGACC AATAGTTTGTACCCtaggaaaaaaatatatctagCTGAaactccagacct tctctataggtgCTTATGCCTCAGTTTAAATcttaaaatcccactggtgg aacattcCTTTTTGCAAACatgcaatttctatttttcccAGGCAAAActa agggcaaattttttttttaaatttcaaacttattttcagacaatatcata tataccattcgaaagctctcgaaaaataatatggaagacttttaaacggt tatagctgatttccttacctaactcgagatatttcatgcgcaagttccac ttttcgccacattttagGTCTAAAATCGACCATAAattgcatcttctgcg tgaatgtTTGAAACttgcttgaaatattgcgttttttTAAGCTTTGCCTT TTGTTTGCCACTGCACTCATGCTAAGTAAATAGGTATATTTGATCGCTTA ATTTTCACAAAGatcttttatatatatatatatataattcaTAATTTAAA TTAGTCTGATTTTCAACCTGGAGATCTCCTGCATCCAAGTGAGACAAGGA AAGCTCATTGCATGATTTTCTATAAGGGAGTGGTCGAGAGTATCTACTAG GGTGGAGTAgaggatattttcaaaaattccaaaaataatttgcagcctCC TTgatatcattaaaaaaatttcaagccCCCCCCTAACCAGTCAATATATT TTTGGCACCCCCTCCCTCTATCCCTCCTGGGCAActtttttaagggctct gaccatggtCAGATCAGAAGATCGGTTACATGATTTGAAgacaaaagttt tgttttgagttccttgacacttttaacaTTATGGTTTCTGAATTTAGTCT ATCGAGAGTAATAagcaatttaattacaaaaataacgTTATGAACCttga tgtatcaaaagttatgactttttttgtgcgaaaaacatttattttgcCAA AATGTACACCATCaagtgtaaaaaatattttcaaaatgttttttctttgc cgaaaataaggtcTCAAATTTGATATACTCTTCTGAAAAGTCTTCAATTT CTTCtccatcaatttttttaaatgttaatttttacttttttagattcagg aatagttggcTTAACAGAATATATATAATATGTGACTCCCCGAGCAATTT TAAGTACATGAAAAGCCGATCGGCCAAAAGACCGCACTTTCTCTTACTGG TCCGTGACCGACTTTTTGCCCGCTTAGGCCGTTCGGGCCATATAAAAGGC CGATAAAAGTCCGCTATAGAAAGCGGCCTTAGCGGCTTTATAAATCGGCC AAGTTAACGGTTTGCTGTTTTTGCTGGCCGCTTTTATTCTGTTTTCGTTT GCCGGCTTTATGTATGActgcaaaaaagttttattatcGGGTGTCTTTAC TTTTTATTGACTGTCGAGAATGTCAAGAATATTTACGTTCGAATGTTTAT CATAACATTCAAATTTCTTCAAAACGTTCGAATAAAGACAAAAAGCATTC GAAATTTTAAAGAATGTTGTGAcagacatttttaaaaatcaaaacaaaaa ggaggaagaagaaaaaagttcgaagagtataggctacgtcatatcttcct tcgtttcgagcgtaaactcctactcttcgggatatgagcactgctcttgt tttgaatattgaaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNgaaagttgtctattatgtttaaacct attaataagcaattcccggtgggggctactagtggccgcctatagcagtg cctatagaccaagagtaaggcctaaaaccctggagctgtctattgtgtat aCTAGAAGAGTAGTGATGGgttttatcttttttgtttatattatatACAG TTATTGTTAGCTGCAAATTGAGATTAATTTACTATGATGAGTAAAAAGAC TTAGCACTTTTGTCAAAGACAAAGAAGAAAGGTAagataattaattttta ttctATATTGTTTTGGTTAGGAGGAAAGAAGGCTGTAAACGGTATATAAA ATAAAGAACAGAGTTGGTAAAACAGAAGagtagtggggtcgtttagcata atttacgggaaaacaatatgatctagctgaaactttctccagaccttctc tataggatggttatgcctcaggaaaaatttccctaaaatcccactggtgg aacatcccttttttgggacatttcttttttccccaggcaaaaccctaagc tAAGGGCgtaatcttttgaaaatttcaaactcattttcggcattatcaag tataccatttgaaagctctcgaaaaactatatagaagacttttaaacggg tatagccgatttcattacctaactcaaaataattcacgcagaagatgcta tttatggtcaattttgaccaaagtgtggggaaaagcatcctatagagaag gtctggagaaagtttcagctagatcttatttttttcctacaaacagcctg catttttgtaacacgaccacactagaGGGTTTAACAGGCGGGTCAAACTG AGGTAGGGGTAGCTAGTTGCGAAGGTCGCACGAAATATTGAGAATATAAA GGAGGTCAAAGAGAGACATGGGTGCCTTTCTGTTACAAGAGAATTCAAAA TTGGAGGAGGTCACGAAGGTCAAATTGAGACAGGGGCATGTGCTTAGAGA GGAGACGCAATTATAGACGAGGTCAAACTGAGGCAGGGGTGTCTTTTTTT ACGAGGAAAATACAATTAGAGGAGGTCGTATTGGGGCAGAGAGTCTTTTC GTTAAAACGAAAAGAGTAAAAAGAGNAAGTGTTTGTTGGAAATCTACCTT TCTATACCAAAGAAGATGAGGTTCAAGACATTTTGAGACAATTTACTACA AATCTTTCCATCACTGAAATGTTTATATGGAAGAATAGAAATACACCAAC TAATGTTCCAACAGAGGCTGCTTTTGTAACATTACAAACTAATGAAATAC GGGATGAATTGGTGAACAATTATCGCTCAAGATATCCAGACCGCTCAACA AGATTTCCTTTCCGAAATAAGCACGGCAATGAGACAAATATTTACATTAC ACTGTGTTATATCCAGCcagataaaaaatataaaggacCAAAATCTTTCc agaaaaccaaagaaacctCCAAAGCTGCTCCTATCTCGACACCGTTAATA CAAACAAAGGATGTCTGTAAACAAGATGAGTTTATCCAAGTTAACAGCCA ACAAGAAAACAGTCTCTCAAATGGAAATGAACAACTTAAAAAGACTGATA TAGCGAATGAAGAGAAAGCTCCATTTTCAGCACTGGACAAATTGAAATCC GAAATTGAAAAAGAGAGATGCCAGCTGTTAGAAAAGATAGACTTTTTTGA AGGCAATTTGAAAATCAAGTGTACTGGATTTTTCATGTCCCTTAAGGAAC TTTCTTTGCTTCAAAAGGAATTTGAGGAACTTTCGGTATCTTTGGTCGAA AAACGAAAAGATTTAAAGAAGAAAACGAGTGAATTTACAGAGATTTATGA CCTCTATGAGCAATTAAATAGCTCAATAATTTGACATTGCTGCAACTCAT GCTTGGCTGTTTTAGTATGATCTTagtgttctttttttttttttttttat acgaCGTGTCTAGAAAAAAGAGGTTAAAGCAAATTTACTAACCCAGGAAT GGAATATCTATAATAtgaatatcaaagaaattcccttttccaatttttcc tAATTCTAGtggaataaaaattttttagggGTTTTACAATATAAATTTGT TCCGCTTATTCCCAAAACACTTttctcaaacaattttttgtttaagaata agaattctttttgTTTGTTATATCTTTGATATGCTTTGTTATTTTATTTA CACTTGTTGCCCTAGATTTCACATTTTGAGCTAAAATAATTTCAGCCAAA TGAAATATTCATTATAGTGTTATTAATTATTCAGATGATAAATAATGtca aataatcaaataatgaataatTTAGTTTGATACCTGGCCTGTGGCTACAC GCAACACTACACGCAACACTTTTTTGAGGTATGAATTCTAGAATATGCCT TGAGCTCTAGTGTAAGATGTTGAAATCttactttaaaatttttgtagaGT GTAGGCTTTTATTTTCATATAGTAGATAGCAAACAGTGTGTTTATCATTA CTATATTAACAGTAACACAATTTATATTGATCATTTATTTAGATTTAGTT AGATTTATTACATATTTTAGGATAATATATTATGGCTGCTAACGACATTG TGTATATTATTATAAGTAAAATATTTATATCAAAGTATAAGATCatatat gtgactccccaagcgatttgaatACACAAAAGTCCGATCGGCTAAAGCGG GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATGAAGACCACAAAGCAAA GGCAAGGAACGGTCTTACTTCAGAAATATAAATGgtttataatataaaaa gagGCTCTTTTTTGGGTCAGCCCTTTTATTATAGTTGTCTAATTTTATTA AAAGGTAACATTATTCAGGTCTTTAACTTTATCTTTATGaatgaaagcaa gaaagaaagaaaggaagGAAGAACTCAAAAGGGTGGTAAATCCCTGGGGA AAAACCCTTTGGAGATTGTTCGTCAATGAAGCTTCcgaaaagtttgtttt gtttctttcggTTGCCGGCAAACGCATTGACTGGTCTTTGTACCGGACTT TAGCCCGATCGGCAGCGGCTGGCCGCAGCCGTGAAATACAGAGGCCGCTT TAAAGTGAAACGAGAATGGCCGATCCATAGCCGATAGAAAAAGAGGCGGG ACCGGTAAAAGTAAAATCTTGGCCGCTAAAAAGCCGTTTTTCTACCGCTT TTTGGCAGATCGGTCTGGACCggtcttttcaggtacttaaaatcgcttgg gaagtcacatatgtcatggTTTCACTGTATAGATCAGTCAGAAAAACACA TTATATGTACACAACAAATAtgaaaattcactatggtcagagcctttgaa atgttctttgatCTCTCACTCTCTCACTGATTTATAAAAACGATATTAAT GAAGAAAAATGGGAAGAGagaaagaaaagcatttgacatccccctagaat cctccaccccctaaTAGATACTTTCTAACCACTCCCTAAGGTTAAAATAT GAACTTTGAAGACAAAAAAGTGTTTGTTGGAAATCTACCTTTCTATACCA AAGAAGATGAGGTTCAAGACATTTTGAGACAATTTACTACAAATCTTTCC ATCACTGAAATGTTTATATGGAAGAATAGAAATACACCAACTAATGTTCC AACAGAGGCTGCTTTTGTAACATTACAAACTAATGAAATACGGGATGAAT TGGTGAACAATTATCGCTCAAGATATCCAGACCGCTCAACAAGATTTCCT TTCCGAAATAAGCACGGCAATGAGACAAATATTTACATTACACTGTGTTA TATCCAGCcagataaaaaatataaaggacCAAAATCTTTCcagaaaacca aagaaacctCCAAAGCTGCTCCTATCTCGACACCGTTAATACAAACAAAG GATGTCTGTAAACAAGATGAGTTTATCCAAGTTAACAGCCAACAAGAAAA CAATCTCTCAAATGGAAATGAACAACTTAAAAAGACTGATATAGCGAATG AAGAGAAAGCTCCATTTTCAGCACTGGACAAATTGAAATCCGAAATTGAA AAAGAGAGATGCCAGCTGTTAGAAAAGATTGACTTTTTTGAAGGCAATTT GAAAATCAAGTGTACTGGATTTTTCATGTCCCTTAAGGAACTTTCTTTGC TTCAAAAGGAATTTGAGGAACTTTCTGTATCTTTGGTCGAAAAACGAAAA GATTTAAAGAAGAAAGCGAGTGAATTTACAGAGATTTATGACCTCTATGA GCAATTAAATAGCTCAATAATTTGACATTGCTGCAACTCATGCTTGGCTG TTTTAGTATGATCTTAGTatgatcttttttattttttatacggCGTGTCT AGAAAAAAGAGGTAAAAGTAAATTTACTAACCCAGGAATGGCATATCTAT AtgaatatcaaagaaattcccttttccaatttttcctAACTCTAGTGgaa taaaaaattttggggggttTTACAATATAAATTTGTTCCGCTTATTCCCG AAACACTTTAGTTTCACTTATATGtaatgagaattttttgtttgagaata agaattctttttgTTTGTTATATCTTTGTTATGCTTTGTTATTTTATTTA CAATTGTTGCACTAGATTTGACATTTTGAGCTAAAATAATTTCATCCAAA TGAAATATTCATTATTGTTATTAATTATTCAGATGATAAATAATGtcaaa taatcaaataatgaataatTCAGTTTGATACCTGGCCTGTGGCTACATGC AACACTTTTTTTGAGGTGAGAATTCTAGAATACTGTATGCTTCGAGCTCT AGTGTAAGATGTTGAAATCTtactttaaatattttgtagaGTGTAGGCTT TTATTTTCATAGTAGATAGCAAACAGTGTGTTTATCATTACTACAATAAC acaatttatttatattgaTCATTTATTTAGATTTAGTTAGATTTATTACA TATTTTAGGATAATATATTATGGCTGCTAACGACATTGTGTATATTATTA TTAGTAAAATATTTATATCAAAGTATAACATCATATATTTAGATTCACCG CATTACACGAGTATAGGCCGAGTTATTGACAGTAAGTTATATCTCTGTAA AAGTAGGgtgcatttttagatttctttaTTTAAAGAACTTCTTTCTATTT ACGTTCAAATACAACTACAAAATGTTTACATGTGATCTTAGTTATTTTCT TGATGTTTTTTCTATAGGTTCACTGTTCTAGATTTTTAGGCAtgaccttt tttttaaatttaagggGTTTCAAACAGTGTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032960XLOC_032960Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052048-exon-scaffold_209-1491911889:44838..45705TCONS_00052048-exon-scaffold_209-1491911889:44838..45705Clytia hemisphaericaexon
TCONS_00052048-exon-scaffold_209-1510915933:44838..45705TCONS_00052048-exon-scaffold_209-1510915933:44838..45705Clytia hemisphaericaexon
TCONS_00052048-exon-scaffold_209-1575043694:44838..45705TCONS_00052048-exon-scaffold_209-1575043694:44838..45705Clytia hemisphaericaexon
TCONS_00052048-exon-scaffold_209-1491911889:53028..54820TCONS_00052048-exon-scaffold_209-1491911889:53028..54820Clytia hemisphaericaexon
TCONS_00052048-exon-scaffold_209-1510915933:53028..54820TCONS_00052048-exon-scaffold_209-1510915933:53028..54820Clytia hemisphaericaexon
TCONS_00052048-exon-scaffold_209-1575043694:53028..54820TCONS_00052048-exon-scaffold_209-1575043694:53028..54820Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_209supercontigscaffold_209:44838..54820 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.84855 5.19255 1.93243 1.90335 8.33087 4.78864 4.49798 4.50775 2.08605 2.11687 1.98336 1.80036 1.08618 0.684839 0.860889 0.769757 1.31049 1.26744 0.43622 0.267379 2.78795 2.64816 10.5136 9.47932 1.30645 2.03854 0.942436 1.33283 6.48379 6.89987
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052048 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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