TCONS_00051907 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051907
Unique NameTCONS_00051907
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1639

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051907 ID=TCONS_00051907|Name=TCONS_00051907|organism=Clytia hemisphaerica|type=transcript|length=1639bp
GATAAAGAGAAACAGAAGTATGAAGATAATCTTTATCTTTCTTACTACCC
TGCTGACAGTCCAAAATGTTTTTTGTTTCGATATGTGGAAAACTATTGAA
GAGAGCAACAAAGAATTCCATaaaaagcaaaaaggattgagtGATGATAA
CGGTCATCGACTTGTTGGTGGAGACATCTTCATGACAACGCAAGATTTCT
TGGAGAATCGAAAGGTGTTATCAGCACCACCCCAAAATGCACCCGCCAAA
CAAAAATTATCACCTGTTTTCGATTATCATAGAAAATATTGGAAAAGAAG
AATTCCATATCAAATCGGAAATGAATTTAGCTCAAAAGACCgtcaagaaa
ttcaaaaatctttgaaatatattgaaGACAGATCATGTTTGAGATTCAGT
AATTCAAAAAGTTCTTATGACAAACATTGGATTAGGTTTTACATTGGATC
TGGGTGTTATTCTGGGCTTGGTCGAAAATATTATTATGACTCAAGATCAA
CGGACGTTTCTCTTGGCAACGGATGTGTGAACCAAGCCATTATTGTTCAT
GAAGTACTTCATTCTATCGGATTTTCCCACGAACAGAGTCGTACAGACAG
AGATAGCTACGTTAACATTTACCTTTACAAAGTGGACAAAGtgttccact
caaattttgataaaaatgttcCCGGCCAAGAGAATTATCATGGTACCCCT
TATGATCTTCGATCCATCATGCAATACGGGAAGACTGGTTTCCGTAAGGG
ATCCGCAACTGGAAATACCATTGAATCAAAAGAAGACCCCGACGCTCCGA
TCGGGAACAGTGATATGTCCGATTGGGATATAACGGAATTGAATCGGAGA
TATCAATGTCAACATGTTGAtgaaaatggaaagaaacaTACAGCAAttat
gAGTGGGTGGAGTCAATGGGTTGGTTGGACCAGATGTATGGAGAACTGGC
GAAAAGAATGCAGCAAAGCCAGATACCGGTTTTGTGTGGATTCTGATAAT
TGTCCAGGTGGAAATAAATGGGGAACAGATGAAGATGTTATCGAATGTTC
GCCCGCAGAATGCAAAGGTGACAAGGAGGCTGTAGATGGAGTTTGGAGCA
GATGGAGTGCTTTTACATCTTGTAGTGGAAAGTGTGGATGGGGCATTCAA
CAAAGAACACGAAAATGTGATAATCCACCTCCACGTGGTAAAGGAAGAAA
ATGTTTCGGAAATTCAATGGAACGAAAATTGTGTCGTAAACAAAGATGTA
GCGCAGGACCTGACAATTTGGACCAAAACTTTGATTCTGGCTTTGGAGCT
TGGACAGCAAaaccaaaacaattttttgcccGTAAGAACGGACGAGCATC
ATACCAATTACCTAAAGATGGACCCTCTAAAGATCATACGTCTCAAGTAA
CTGGTAGAGCTGGATATTATATTGCATCATTCACAGAGAAGGGTTGGTAT
TACGATAATAAAAGAAAACGAATCATAGCGGACTTATCAGTCACCACTAC
CCAAACACACGCAAAAGCCTGCTTATCATTCCACTACATGTTAAATGGTC
TTAATATAATCTCCAAAAATGCAATAAGTGTCTATTGGAAAACACCGAAA
GGAGAATATATCAATTCAGCGTTTAACAAAGGAGGCAAT
Run BLAST on NCBI

transcript from alignment at scaffold_206:100179..107748-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051907 ID=TCONS_00051907|Name=TCONS_00051907|organism=Clytia hemisphaerica|type=transcript|length=7570bp|location=Sequence derived from alignment at scaffold_206:100179..107748- (Clytia hemisphaerica)
GATAAAGAGAAACAGAAGTATGAAGATAATCTTTATCTTTCTTACTACCC
TGCTGACAGTCCAAAATGTTTTTTGTTGTAAGTATATTTTTGGAATTGCT
GTTGATACTTCATGTCCTAAACCTTTACATCCCTGTCTCAGTGACCCAGT
AGATTTTTGGTGCCCTTGGTAAAAGGGTAAAAGGATGAAAGAATTTGATA
CGGTGTTCTGCAAAAGCTTTCCTCTACTTCCAATAATTTTGTCATCGAAG
CCTTATGCTCTTATATAGTTTTTTCTTATTTATAAACAAATCCGAATCTG
AAAGCCCGGTTAACACCCTAATTTAACCTTCGGAGTACGTTTGTAACATA
ATTCATAAAGACATGCAACTCCACTCCTTATTCTAGTCGATATGTGGAAA
ACTATTGAAGAGAGCAACAAAGAATTCCATAAAAAGCAAAAAGGATTGAG
TGGTAAGTTTTGTGGACTGTAAACTCGAACCCAGTCCCATTTGACTGGTT
CTGGTACGATCCGGGTCAAAATATTTGAGAAAAAAGGGAAATTCCTACAA
GATCCTATACTCAAAAATGATTTGGAAGCGCTCTAAGCTAGGTTAGCAGG
GTAGAGTTTTAACTCTCAGTTTTAACATTAGGCTTACGACCTAAAGATTT
CACTTCAGGATCCAAAAGTTAAGAATGGTCCAATAAGGCTCAGAATATAG
CCTGGAAGTCGATGAACCCCTCCCAAATATTCGATAACATTTAGAAAATT
GGCCCAAAAGCGACTTTCTTGCCCGAACTTTAAACTTTTAAAAATGAGGA
AATAACTAAAATTCTCAATATATTTTGAACCGGATTGTAGAATTGATTAG
TCCTTTAGAAGGCCATGGTTCAGCTAAAATAACTTCACTTTCTTTTGTAT
AACCAAGCTGATAGTCCCCAGGTTAAAACTAATCTTCATAAATCGATATT
CTAGATGATAACGGTCATCGACTTGTTGGTGGAGACATCTTCATGACAAC
GCAAGATTTCTTGGAGAATCGAAAGGTGTTATCAGCACCACCCCAAAATG
CACCCGCCAAACAAAAATTATCACCTGTTTTCGATTATCATAGAAAATAT
TGGAAAAGAAGAATTCCATATCAAATCGGAAATGAATTTAGCTCAAAAGG
TAGGTTCGATTCCTATATAGTTTTATTCTACCAAATTTCAGTGGATCGAT
TTTCACCAAATTCCACATTTCTGCAAATCGTGACCCGTCGAGATAGAAAA
TAATCCAAAACACAACAATGATGATTTTTTTGACATTCGTCACCCACATA
CAGTGGCTGATATCATGCAACCCTTTGACCGATTTGCGAAATGTGAAAAT
AAGTTTCCTAACCACTCAAATGGACATTTTTTTGTAAGAATATCTACAAT
TGATTAGGCCTTTGGATGTTCTTAACTTTTTTAGTGTTAATCGCAAAAGT
GTTTTTATGTTCTTATTTTAACGATTTTGTGAGTATTTTTATTCATTTCC
CTAAGCAATCGAGTGCTTAAGAGTTGGCAAAGCCTTATTCTCAAATTTCA
GTCATCAAAGCCTTGTATTCTTTTATAACATTTTCTCTATCTAATTTCAG
ACCGTCAAGAAATTCAAAAATCTTTGAAATATATTGAAGACAGATCATGT
TTGAGATTCAGTAATTCAAAAAGTTCTTATGACAAACATTGGATTAGGTT
TTACATTGGATCTGGGTAAACACGTCTTTTAAACATTTATAAAGAGAACT
TCAAATGCAAACAGGCCAGGGAGTGGTCCGAAAGTATACAAGGAGGGGAT
GGAGAATTTTAGGATGTTTTCCCACCCTCAGGGAAGGGTCTCAAAAAATT
TCATATATTTGAGGGGTTCTATATTGGGATAGGGGGTGCCAAAAATATAT
TGACTGGTTAGGGAGGGGCTTGAAACCTTTTTGAAAATATCTAGGTGGGA
GTGAGATTACTTTTTGGAATTTGTGAAAATATCCTCCACCCCACCCTATG
ATGACCACTCCCTTACAAGGCATAGTGTATAGTGTATTTTTCACCACTTT
TCTAACTTTCTGGGCCAGTATTTGCACCAATGTGAAGGGAAGGTCAAGAT
TATAACCAAAATTCTCGTTTTCCATTTCCATGCAACAAGACAACCATTTT
GCGAAAGGTCTTTATTTGCGAACTTTTCACTTTGAAATTGAATGCTTAAC
AATCAGGTTCGTAAAAAAGATCTATATACTCTCTGTTAGACTAACAAGCA
TTTCCCTTTCTTGGGACACAGGGGCGTAGGAAAAGTTTTTATATTGCGAA
CGTGTTGAGCCCCCATACAAAGCATAAGCTGTATTAAAATACAACGAAAT
GGTTTACTAGTCGAACTCTCTTTACATTCAGGTGTTATTCTGGGCTTGGT
CGAAAATATTATTATGACTCAAGATCAACGGACGTTTCTCTTGGCAACGG
ATGTGTGAACCAAGCCATTATTGTTCATGAAGTACTTCATTCTATCGGTG
AGCGATTTGAAGCTTTCCCCTAACAATCTTAAGGCTGATCTCCGCTTGCG
CGCGCTGCGATCGCACTTTTTTGAAAGCGGCTTGATGCTTTGCTAAATAA
TTGACTACAGTACAGAGAAAGCCTCCGTGTTCTTGGTCAAAAGAAAAATG
TAACAATTCCATTAGCATGATCTGACGTAACAGTTGAAAAAAGTTGAAAT
GTATTCAACTTTTTTTTCGAGCGTGCTACATTATATGACGTGATGACAAT
TCAAGAAATGACTTAATCTTTTTTCCAAGCAAAAAGGATTGAAGCTAAAC
TATGCTATAGTCTAAGACGAATTCGAATAATAAAATAATCTCAATCACGC
AAATTAGTAGTCAGGCGGAAATTTAGTCCGCATGGGTGAAAAATAGTCGG
AGGGCTCAATGTCTTAGACTATATCATTATCCTTTTAACTGTAAATTGTC
CATCATCCCCCAAGAAGGCTTAAAATGCTATTTTTTGCTTGGTATGTATA
GTATGTTAACTTAAGTTGAATTCGGATCCTACCCTACAATCGGCGCCGAA
ATATATTGTCACTTTTGGGTATTTTAACGTTTTTCAGATTTTAAAGATCG
GGCAAGAATCGCAGTTTCAGTACTGTTCAACTTTGTTTCATTAGATTTTT
CGATTTGGGAGGGTTAAGTGGCTTCCAGGCTACATATATTCTCAGCCTTA
TTGGAATATTTTTGAGCTTTTAGGTCTTGGTCCTAAGTCTCGTGTTAAAA
CTCGGAGTTAAAACCCTACTTTATATAAAAAAAGCACTTCACTTGGTAAT
CTTGCTAGCTGGTCCGTTTTCAGATTTACTCTTTATTGCCTTGTAGGATT
TTCCCACGAACAGAGTCGTACAGACAGAGATAGCTACGTTAACATTTACC
TTTACAAAGTGGACAAAGGTATAAAAATGGGTTTAAAATTTCATAACATT
ATAATAGATTTTCAAAGTCCTACAATTCTGGATGATTATGGTTTACACTA
AAAATCTCCAATGAGTTTTTTAATAGTTTTTGTCTGGTTGAAGATAAAAA
GACTTTTGATTTCTCCTCTGGCAGTCGGTACCACTACATGAAAAAGGAAA
CTATTGCCTTAACGGAAACTATTTCCCGAACGGGAAGGTGAAAATAATTC
AAAATAGGAAACTGTTCCCAGATTGAAAATTCCATCACTTTTCTGTTTCC
CGTTTTGGTCAAGAACTTTTCATCGTCCCCGAACGGGAATTAGAATTTTT
GTAAACAAAGCAGATTTTTGTTTCCCGATCGAGAAAAAACTTCCAAATAG
AGAAGTTTTTAATTGGGAATGAGGATAGAGAATTAAGAAGCGATTAGCCG
GTGGGTTTCTTAACTACCTGGTGAAAATTATTTATTTTCCTTCCTTTACA
AGAGGGACAAGTTTTAAACTTTCCACAGGTATTTCCGAAGTGCTCAGAGG
CCACTTTTCTGATCGGGACACTTCCCGATTTGGAAAGTCTAGCCATTTCG
GGAAGTTTTCCACCTTCCCGTTTGGGAAATATTTTCTGTTAAAGCAATAG
TTACCTTTTCCATGTAGTGCTCCCGACTGTCTGGTAATTATACAAATTTT
TATTTTAAGTGTTCCACTCAAATTTTGATAAAAATGTTCCTGGCCAAGAG
AATTATCATGGTACCCCTTATGATCTTCGGTCTATCATGCAATACGGGAA
GACTGGTTTCCGTAAGGGATCCGCAACTGGAAATACCATTGAATCAAAAG
AAGACCCCGACGCACCGATCGGGAACAGTGATNCACTCAAATTTTAATAA
AAATGTTCCCGGCCAAGAGAATTATCATGGTACCCCTTATGATCTTCGAT
CCATCATGCAATACGGGAAGACTGGTTTCCGTAAGGGATCCGCAACTGGA
AATACCATTGAATCAAAAGAAGACCCCGACGCTCCGATCGGGAACAGTGA
TATGTCCGATTGGGATATAACGGAATTGAATCGGAGATATCAATGTCAAC
ATGTTGATGAAAATGGAAAGAAACATACAGCAAGTGAGTTATCTATATTT
ATTGTCTGTTACCTCCTGGTACACGTTTTTTATAAGGAACCTTAACTTGG
CTCCGAGTCTAGAGCTCCTTATTTTTCAGAGCATTTCAGCTTCAAAGTTC
CTTATCGGAGCTCCTTCTTTACTTCGCTACAAAGCTCGGACTGACTTGAT
GCTTTGCTAAATAATTGACTACAATACAGAAAAAGCCGTTTATTAAACAT
TGTTTAACCAATATTTTTTAAAAAATCAATTTTTTGTTTAAGTATTTGTA
AATATTTGTAAGTTAGTTTAACTCTTACTATTCCTTAACTTGTTTTCGTA
TTCTCAGCCTGAGCTGTTCCTTGGACAATTCCTTAATTTTCGGACAATTT
CCAGCCTCAAGTTCCTTATAAAAAATGTGTACAGTATGGTATGAGCTAAC
TAACATCTAAATAGCGCTACAAGATGGGAAATAATATAAATTAGCAGATA
GGTCAGTGAATTACATTTTCGTAGATGTGGCAACCTGTTTGCTGTCCTTT
GCTAGATTGAAGGACTTTTTATTGAAATATTGATGCAATTAGCACAATTT
ATTCCCCCAAACCATGACATGCTTAGTTTTATGAAAAACTATTTTCATTT
TCAGTTATGAGTGGGTGGAGTCAATGGGTTGGTTGGACCAGATGTATGGA
GAACTGGCGAAAAGAATGCAGCAAAGCCAGATACCGGTTTTGTGTGGATT
CTGATAATTGTCCAGGTGGAAATAAATGGGGAACAGATGAAGATGTTATC
GAATGTTCGCCCGCAGAATGCAAAGGTAATTAAAATACACCTTTTTGACA
CATTTTTCTATTTTCTATAGGTGCAAAAAAAGGACTGGGACAGTTTTAGT
GGGATAAAGCGGACAAAAAATGCCCACGCGGCAATTGGCGGTTACGGTCG
AAAAGGTGTATTTGTTGATGGCTTCATTATTCTCCAAATCAGCTGTCAGT
TAAATTACGAATGCAGAAAACTTTTAACAGAATTTGATTTTGTGCTTTTG
AAAACACAACCGTGAGGGGAATATCGTCATATAAAAAAATCGAAAACGAA
GATGAAAATTAAGAGGAAAAAGATCAATCCCAGTGCTAGCATAGCTATCA
TTCGTTACATAACTGAAGAAACCTCTAAAAAATCATTCACTGCAAACGAA
TGTAAATGTATATATTTTCAGTCAAAATATATGGCGTTTGATTTCTGACA
GGTTGACCTTATTAAAAAGGCCATATTTTTTGTTGTTTTTGGAGTCAACA
AGTGACCATGTTTGGTCTATATTCTTTGATTGAAGAAATCTTTTTTGAAA
ATCTATGAACAATCTCGGGCTGCTCGCCTTGAATGTAACTAATTAGATCA
AAGCAAGCGCATATGACTGTTTTTTCTATCTGACACAGGTGACAAGGAGG
CTGTAGATGGAGTTTGGAGCAGATGGAGTGCTTTTACATCTTGTAGTGGA
AAGTGTGGATGGGGCATTCAACAAAGAACACGAAAATGTGATAATCCACC
TCCACGTGGTAAAGGAAGAAAATGTTTCGGAAATTCAATGGAACGAAAAT
TGTGTCGTAAACAAAGATGTAGCGCAGGACGTAAGTCGATCATATCTAGA
TGGGATTGTATTTTATAAGTTCTAGTAATACAAACTCTTATACCCGGGGG
GGGGGGGCATTCAAGGTAAATAACCTACCATACATGCACTGTAAGGGTCA
AAATCAGCAAAGATGAGAAAAATTGTATTTTAAAAATCTAACCATAAATA
TGTACTGCTCTAAGTGTCGATTTTTCGCTCAAATTTTGCAAAATTCTCTT
TGCATTTTAAGGGTCTGATTTCAATGGCCTAATTTCGGCTGCGCGTATAG
TCGTTTTTTAATCAAGTGAAGCCCCCCCCCCGGACTCCGCGATAAGAAAA
TACTGAATCCATTTGAGTGCGTCTTCAATGACTTACGTTCTAACTCTTTT
AACTAAGTGGATTTTTTCTAGTTTGACGCTAATCAAGAGCCTTCCCAGCT
GGCACATAACGTCAAAACAACGTCCATGTGGCATTCATAACGTCCAATTA
ACGTTACTTGAACGTTAAAACAACATTGAGTGCCAGCTGGGTTTATTCCA
CTGATGTTATCTTTTTTTCCCTTCACACAGCTGACAATTTGGACCAAAAC
TTTGATTCTGGCTTTGGAGCTTGGACAGCAAAACCAAAACAATTTTTTGC
CCGTAAGAACGGACGAGCATCATACCAATTACCTAAAGATGGACCCTCTA
AAGATCATACGTCTCAAGTAACTGGTAGAGCTGGTAAGTTTGACAAATAA
AAGTTAGTACTAGTAATCTCATGGTTGTGAGAGAAATTCGGGATAAATTT
CCCGAAGTCAATTTTGAAATTTTTTGAAATTTCCCGAGTGCAACAAACAT
TTCGAAATTTGACCGAGGGTAATGTATCAAGAATTTCACGAAAACAAGCA
TGAGATTCCTGATTAATCTCATGGTTTGAATTGGATATTTTAGACAGATA
CACGGAAATATTTGATCATTCCTTAAAAAAACAATAGAAAATCATTAATT
GAAAAATACAACCATGCTCGCATGAATGATCCTTGAACAATACAAGATTT
TCGCATAAAAGATAAAATAATTCAGTTAAAAATACAATAACTAAAAATAC
AAGTGAGGGAGAGAGTAAGAGATGGACAAAATTAGAAATTAGAAAAAAAT
TATGCTGAAAATATGAAATCATCATAGTGGCGAGATCAAGCGTCGCAGAT
TCTGTTCAAAATTCTTTACTCGGCCTATGTATATTTGTTTTAGGATATTA
TATTGCATCATTCACAGAGAAGGGTTGGTATTACGATAATAAAAGAAAAC
GAATCATAGCGGACTTATCAGTCACCACTACCCAAACACACGCAAAAGCC
TGCTTATCATTCCACTACATGTTAAATGGTCTTAATATAATCTCCAAAAA
TGCAATAAGTGTCTATTGGAAAACACCGAAAGGAGAATATATCAATTCAG
CGTTTAACAAAGGAGGCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032853XLOC_032853Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051907-exon-scaffold_206-1575043694:107672..107748TCONS_00051907-exon-scaffold_206-1575043694:107672..107748Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:107297..107362TCONS_00051907-exon-scaffold_206-1575043694:107297..107362Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:106600..106794TCONS_00051907-exon-scaffold_206-1575043694:106600..106794Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:106034..106148TCONS_00051907-exon-scaffold_206-1575043694:106034..106148Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:105252..105367TCONS_00051907-exon-scaffold_206-1575043694:105252..105367Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:104331..104402TCONS_00051907-exon-scaffold_206-1575043694:104331..104402Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:103614..103639TCONS_00051907-exon-scaffold_206-1575043694:103614..103639Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:103216..103444TCONS_00051907-exon-scaffold_206-1575043694:103216..103444Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:102424..102594TCONS_00051907-exon-scaffold_206-1575043694:102424..102594Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:101619..101810TCONS_00051907-exon-scaffold_206-1575043694:101619..101810Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:100916..101068TCONS_00051907-exon-scaffold_206-1575043694:100916..101068Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1575043694:100179..100405TCONS_00051907-exon-scaffold_206-1575043694:100179..100405Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:107672..107748TCONS_00051907-exon-scaffold_206-1510915933:107672..107748Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:107297..107362TCONS_00051907-exon-scaffold_206-1510915933:107297..107362Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:106600..106794TCONS_00051907-exon-scaffold_206-1510915933:106600..106794Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:106034..106148TCONS_00051907-exon-scaffold_206-1510915933:106034..106148Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:105252..105367TCONS_00051907-exon-scaffold_206-1510915933:105252..105367Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:104331..104402TCONS_00051907-exon-scaffold_206-1510915933:104331..104402Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:103614..103639TCONS_00051907-exon-scaffold_206-1510915933:103614..103639Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:103216..103444TCONS_00051907-exon-scaffold_206-1510915933:103216..103444Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:102424..102594TCONS_00051907-exon-scaffold_206-1510915933:102424..102594Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:101619..101810TCONS_00051907-exon-scaffold_206-1510915933:101619..101810Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:100916..101068TCONS_00051907-exon-scaffold_206-1510915933:100916..101068Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1510915933:100179..100405TCONS_00051907-exon-scaffold_206-1510915933:100179..100405Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:107672..107748TCONS_00051907-exon-scaffold_206-1491911889:107672..107748Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:107297..107362TCONS_00051907-exon-scaffold_206-1491911889:107297..107362Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:106600..106794TCONS_00051907-exon-scaffold_206-1491911889:106600..106794Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:106034..106148TCONS_00051907-exon-scaffold_206-1491911889:106034..106148Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:105252..105367TCONS_00051907-exon-scaffold_206-1491911889:105252..105367Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:104331..104402TCONS_00051907-exon-scaffold_206-1491911889:104331..104402Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:103614..103639TCONS_00051907-exon-scaffold_206-1491911889:103614..103639Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:103216..103444TCONS_00051907-exon-scaffold_206-1491911889:103216..103444Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:102424..102594TCONS_00051907-exon-scaffold_206-1491911889:102424..102594Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:101619..101810TCONS_00051907-exon-scaffold_206-1491911889:101619..101810Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:100916..101068TCONS_00051907-exon-scaffold_206-1491911889:100916..101068Clytia hemisphaericaexon
TCONS_00051907-exon-scaffold_206-1491911889:100179..100405TCONS_00051907-exon-scaffold_206-1491911889:100179..100405Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_206supercontigscaffold_206:100179..107748 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0280907	0	10.2426	10.021	35.9222	42.7583	71.3056	59.7817	67.4297	72.6765	12.2535	14.9326	3.44593	0.754836	24.7206	50.6211	4.71536	11.7876	8.5247	8.3786	1.173	0.96119	1.91093	1.80549	0.328501	0.36754	2.21289	3.14862
Blast
[Close]
BLAST of TCONS_00051907 vs. Swiss-Prot (Human)
Match: MEP1A (Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.800e-23
Identity = 65/193 (33.68%), Postives = 95/193 (49.22%), Query Frame = 2 
Query:  290 WKRRIPYQIGNEFSSKDRQEIQKSLKYIEDRSCLRFS--NSKSSYDKHWIRFYIGSGCYSGLGRKYYYDSRSTDVSLGNGCVNQAIIVHEVLHSIGFSHEQSRTDRDSYVNIYLYKVDKVFHSNFDKNVPGQENYHGTPYDLRSIMQYGKTGFRKGSATGNTIESKEDPDAPIGNS-DMSDWDITELNRRYQC 859
            W   IPY + +      +  I  + +    +SC+ F     +SSY    I F    GC+S +G ++       ++S+G GC  +AII HE+LH++GF HEQSRTDRD YVNI+  ++   +  NFD           TPYD  S+M Y    F K ++         + ++ IG   D S  D+  LNR Y C
Sbjct:   75 WTFPIPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSY----IIFQQFDGCWSEVGDQHV----GQNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDDSLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIGQRLDFSAIDLERLNRMYNC 259
The following BLAST results are available for this feature:
BLAST of TCONS_00051907 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1A1.800e-2333.68Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE... [more]
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