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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051904 ID=TCONS_00051904|Name=TCONS_00051904|organism=Clytia hemisphaerica|type=transcript|length=231bp
TGATATTGTATTTGACAACAACGAATGCCCGAAATATCTTGATTCCACAA
AATGCGCAGATGACCCCTCGTTCGATTGCAAGTCCAAAAAGAACATGTGT
GTTTTTGACTGGCGAGTTATGATCCCAAGATGTTGTCACACTTGCTCAGA
TCCTTCATTGAAGATCACTGGGGAGACATGTCTCGATAACCCAACTTATG
CCGGTAAATGTAAAGGATGGACTGAAAAAGG Run BLAST on NCBI transcript from alignment at scaffold_206:98090..99243- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051904 ID=TCONS_00051904|Name=TCONS_00051904|organism=Clytia hemisphaerica|type=transcript|length=1154bp|location=Sequence derived from alignment at scaffold_206:98090..99243- (Clytia hemisphaerica)
TGATATTGTATTTGACAACAACGAATGCCCGAAATATCTTGATTGTAAGT
TATATTGCATGAAAATTATAGACAGACGGAACAGAATTAAAATTCCATAA
TTAACTACCTTATAACTAGCCTATACTAGACGTACACTAGCGTTTTTTTC
TACACAATTAACACCAAGAAACAACATAACATTTCCTGTTATCTGGTTGT
CGGTGAGGTAATCGCTACCCCCCCCCCCCATTATAAATTTGAAACAGACG
AATTTTGCTAAAATACGTCAACTGATACTTTCGAAACACGTCGATTCTAA
TTAAGATCTCTTAATCGTTACTCTTCATTCTAGCCACAAAATGCGCAGAT
GACCCCTCGTTCGATTGCAAGTCCAAAAAGAACATGTGTGTTTTTGACTG
GCGAGTTATGATCCCAAGATGTTGTCACACTTGCTCAGGTAAAGCGATTA
TTTGTACACCCCTGTGTCACAGACCCGCTGATCCAGCTCCACTGAAAAAT
TCGGTGAAAATTTCGTCCCCGGTGGGAAAATACTCTGGAATTTCAGCCCC
ACTGGGAAATTGACTTTAACTTGATCCCCATTCGATATTCAATGTTTAAA
AATTGTACTTCAAAACCATCCCCACTGGAACTTTTAACTTTGGAATAAAT
AAATAATTACTTCTATAACCCCATTGGGATTTTAATAGGAATCCCCACTG
AGGAAAAAATTTACATCGGGCCTGTGAGACGGGGGTGTATTTGTCAATAT
ATTCAAGGTATCAAAATATTTCAAGGTTTAAAATTATTTAGAAACCCTTC
ACGACTTTGATAGAAAGTTGAGTTTGAGAGGCAAGGAAAAGCGAGTAGAA
CATACTACTAGCTGTCCCAGTGTTGGCCGAGTGCACCCCTGTCTCACATC
CCTGGTTCAATCTCTTCCCACAGTGGGTTTGTGGTGAGGGGATGACCGAA
TTGACAGTTCAGTGGAATTTTTTCCACTCTCATCTAAGGAAATTTTAAAG
AATTCACGAGGGAGAAGCACTTGCAAGTCATGAAAAATGATAACAATTTC
TCTGAAAACTTCTCTCGTTTAGATCCTTCATTGAAGATCACTGGGGAGAC
ATGTCTCGATAACCCAACTTATGCCGGTAAATGTAAAGGATGGACTGAAA
AAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051904-exon-scaffold_206-1575043694:99200..99243 | TCONS_00051904-exon-scaffold_206-1575043694:99200..99243 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1575043694:98806..98910 | TCONS_00051904-exon-scaffold_206-1575043694:98806..98910 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1575043694:98090..98171 | TCONS_00051904-exon-scaffold_206-1575043694:98090..98171 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1510915933:99200..99243 | TCONS_00051904-exon-scaffold_206-1510915933:99200..99243 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1510915933:98806..98910 | TCONS_00051904-exon-scaffold_206-1510915933:98806..98910 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1510915933:98090..98171 | TCONS_00051904-exon-scaffold_206-1510915933:98090..98171 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1491911889:99200..99243 | TCONS_00051904-exon-scaffold_206-1491911889:99200..99243 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1491911889:98806..98910 | TCONS_00051904-exon-scaffold_206-1491911889:98806..98910 | Clytia hemisphaerica | exon |
| TCONS_00051904-exon-scaffold_206-1491911889:98090..98171 | TCONS_00051904-exon-scaffold_206-1491911889:98090..98171 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_206 | supercontig | scaffold_206:98090..99243 - |
Blast
The following BLAST results are available for this feature:
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